## Wed Jul 3 11:46:13 2024 ## emapper-2.1.12 ## /d223NFS/m128030022/anaconda3/envs/eggnog/bin/emapper.py -i /d223NFS/m128030014/NGP/gene_list/prokka_results/GCA_024125345.1/GCA_024125345.1.faa --temp_dir /d223NFS/m128030022/NGPs/NGPs_new/databases/NGPs_DB/NGPs_db/GCA_024125345.1/2.eggNOGmapper --output_dir /d223NFS/m128030022/NGPs/NGPs_new/databases/NGPs_DB/NGPs_db/GCA_024125345.1/2.eggNOGmapper --output eggNOG_out --override --cpu 20 -m diamond --sensmode fast ## #query seed_ortholog evalue score eggNOG_OGs max_annot_lvl COG_category Description Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction PFAMs PHJFGMMN_00001 411477.PARMER_03209 0.0 1085.0 COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FPTV@200643|Bacteroidia,22XDP@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - Glyco_hydro_20,Glyco_hydro_20b PHJFGMMN_00002 411477.PARMER_03987 1.99e-16 72.0 298PA@1|root,2ZQYC@2|Bacteria,4P7SE@976|Bacteroidetes,2FTQE@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4248) - - - - - - - - - - - - DUF4248 PHJFGMMN_00003 411477.PARMER_03213 3.57e-308 837.0 COG4225@1|root,COG4225@2|Bacteria,4NDYS@976|Bacteroidetes,2FM61@200643|Bacteroidia,22XA8@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl Hydrolase Family 88 - - - - - - - - - - - - Glyco_hydro_88 PHJFGMMN_00004 411477.PARMER_03214 0.0 1248.0 COG4225@1|root,COG4225@2|Bacteria,4NF1N@976|Bacteroidetes,2G3HE@200643|Bacteroidia,22Z10@171551|Porphyromonadaceae 976|Bacteroidetes S Heparinase II/III-like protein - - - - - - - - - - - - DUF4962,Hepar_II_III PHJFGMMN_00005 411477.PARMER_03215 0.0 2197.0 COG5434@1|root,COG5492@1|root,COG5434@2|Bacteria,COG5492@2|Bacteria,4NHMV@976|Bacteroidetes,2FM12@200643|Bacteroidia,22VVN@171551|Porphyromonadaceae 976|Bacteroidetes N Polysaccharide lyase family 8, N terminal alpha-helical domain - - 4.2.2.5 ko:K19049 - - - - ko00000,ko01000 - PL8 - DUF1573,Lyase_8,Lyase_8_C,Lyase_8_N PHJFGMMN_00006 411477.PARMER_03216 0.0 1790.0 28I1E@1|root,2Z862@2|Bacteria,4NGDW@976|Bacteroidetes,2FPGS@200643|Bacteroidia,22ZCE@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - Hepar_II_III PHJFGMMN_00007 411477.PARMER_03217 0.0 1332.0 COG5434@1|root,COG5434@2|Bacteria,4NG62@976|Bacteroidetes,2FRCM@200643|Bacteroidia,22YHC@171551|Porphyromonadaceae 976|Bacteroidetes M Periplasmic copper-binding protein (NosD) - - - - - - - - - - - - Alginate_lyase,Beta_helix,Hepar_II_III,Hepar_II_III_N PHJFGMMN_00008 411477.PARMER_03218 5.66e-234 644.0 28HYS@1|root,2Z843@2|Bacteria,4NJ2I@976|Bacteroidetes,2FR0D@200643|Bacteroidia,22Z4X@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4466) - - - - - - - - - - - - DUF4466 PHJFGMMN_00009 411477.PARMER_03219 1.66e-119 341.0 2AR76@1|root,31GGW@2|Bacteria,4NU77@976|Bacteroidetes,2FT50@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00010 411477.PARMER_03220 0.0 1293.0 COG0614@1|root,COG0614@2|Bacteria,4NIFM@976|Bacteroidetes,2G3HP@200643|Bacteroidia 976|Bacteroidetes P SusD family - - - - - - - - - - - - SusD-like_3,SusD_RagB PHJFGMMN_00011 411477.PARMER_03221 0.0 2274.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FWW6@200643|Bacteroidia,23249@171551|Porphyromonadaceae 976|Bacteroidetes H CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_00012 411477.PARMER_03222 9.34e-237 652.0 COG3712@1|root,COG3712@2|Bacteria,4NR47@976|Bacteroidetes,2FWBG@200643|Bacteroidia 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_00013 411477.PARMER_03223 9.27e-126 358.0 COG1595@1|root,COG1595@2|Bacteria,4NNBY@976|Bacteroidetes,2FXHP@200643|Bacteroidia 976|Bacteroidetes K Sigma-70, region 4 - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_00014 411477.PARMER_03224 0.0 1830.0 COG4206@1|root,COG4206@2|Bacteria,4PKFW@976|Bacteroidetes,2FM4V@200643|Bacteroidia,22WYS@171551|Porphyromonadaceae 976|Bacteroidetes H Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3 PHJFGMMN_00015 411477.PARMER_03225 4.71e-135 383.0 COG0705@1|root,COG0705@2|Bacteria,4NECA@976|Bacteroidetes,2FUYA@200643|Bacteroidia,231V4@171551|Porphyromonadaceae 976|Bacteroidetes S Rhomboid family - - - - - - - - - - - - Rhomboid PHJFGMMN_00017 411477.PARMER_03227 0.0 957.0 COG1502@1|root,COG1502@2|Bacteria,4NE2W@976|Bacteroidetes,2FMEA@200643|Bacteroidia,22W66@171551|Porphyromonadaceae 976|Bacteroidetes I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol cls - - ko:K06131 ko00564,ko01100,map00564,map01100 - R07390 RC00017 ko00000,ko00001,ko01000 - - - PLDc_2,PLDc_N PHJFGMMN_00018 411477.PARMER_03228 1.05e-131 373.0 COG0742@1|root,COG0742@2|Bacteria,4NM7J@976|Bacteroidetes,2FSR0@200643|Bacteroidia,22XZ4@171551|Porphyromonadaceae 976|Bacteroidetes L RNA methyltransferase, RsmD family rsmD - 2.1.1.171 ko:K08316 - - R07234 RC00003 ko00000,ko01000,ko03009 - - - Cons_hypoth95 PHJFGMMN_00019 411477.PARMER_03229 4.71e-200 553.0 2DMVR@1|root,32TZG@2|Bacteria,4NSV8@976|Bacteroidetes,2G3AR@200643|Bacteroidia,23213@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3822) - - - - - - - - - - - - DUF3822 PHJFGMMN_00020 411477.PARMER_03230 3.57e-144 407.0 2C0G9@1|root,310GM@2|Bacteria,4NHU0@976|Bacteroidetes,2FN0C@200643|Bacteroidia,22YIM@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG19144 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_00021 411477.PARMER_03231 0.0 938.0 COG0507@1|root,COG0507@2|Bacteria,4NDYK@976|Bacteroidetes,2FNT1@200643|Bacteroidia,22WXS@171551|Porphyromonadaceae 976|Bacteroidetes L COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member recD2_2 - 3.1.11.5 ko:K01144 - - - - ko00000,ko01000 - - - AAA_30,UvrD_C_2 PHJFGMMN_00023 411477.PARMER_03232 1.09e-161 453.0 2EKSY@1|root,33EGP@2|Bacteria,4NXJC@976|Bacteroidetes,2FSBT@200643|Bacteroidia,22YZ5@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG23390 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_00024 411477.PARMER_03233 6.35e-164 459.0 COG0313@1|root,COG0313@2|Bacteria,4NFQM@976|Bacteroidetes,2FMU1@200643|Bacteroidia,22W2B@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA rsmI - 2.1.1.198 ko:K07056 - - - - ko00000,ko01000,ko03009 - - - TP_methylase PHJFGMMN_00025 411477.PARMER_03234 3.59e-138 398.0 COG4372@1|root,COG4372@2|Bacteria,4NQMG@976|Bacteroidetes,2G2H1@200643|Bacteroidia,231WS@171551|Porphyromonadaceae 976|Bacteroidetes S Transposase - - - - - - - - - - - - - PHJFGMMN_00026 411477.PARMER_03235 2.41e-171 477.0 COG1011@1|root,COG1011@2|Bacteria,4NM66@976|Bacteroidetes,2FMM5@200643|Bacteroidia,22XNU@171551|Porphyromonadaceae 976|Bacteroidetes S Hydrolase yjjG - - ko:K07025 - - - - ko00000 - - - HAD_2 PHJFGMMN_00027 411477.PARMER_03236 1.18e-114 328.0 COG3637@1|root,COG3637@2|Bacteria,4NTUD@976|Bacteroidetes,2FS3S@200643|Bacteroidia 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl PHJFGMMN_00028 411477.PARMER_03237 0.0 1057.0 COG4108@1|root,COG4108@2|Bacteria,4NFEZ@976|Bacteroidetes,2FN0A@200643|Bacteroidia,22W67@171551|Porphyromonadaceae 976|Bacteroidetes J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP prfC - - ko:K02837 - - - - ko00000,ko03012 - - - GTP_EFTU,GTP_EFTU_D2,RF3_C PHJFGMMN_00029 411477.PARMER_03238 3.21e-209 578.0 COG1091@1|root,COG1091@2|Bacteria,4NE3K@976|Bacteroidetes,2FN7H@200643|Bacteroidia,22WWK@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose rfbD - 1.1.1.133 ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R02777 RC00182 ko00000,ko00001,ko00002,ko01000 - - - RmlD_sub_bind PHJFGMMN_00030 411477.PARMER_03239 1.05e-125 358.0 2CGY7@1|root,2ZGS8@2|Bacteria,4NREX@976|Bacteroidetes,2FPIK@200643|Bacteroidia,22XT2@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4924) - - - - - - - - - - - - DUF4924 PHJFGMMN_00031 411477.PARMER_03240 2.47e-223 615.0 COG0773@1|root,COG0773@2|Bacteria,4NF99@976|Bacteroidetes,2FQTW@200643|Bacteroidia,22Y3A@171551|Porphyromonadaceae 976|Bacteroidetes M Mur ligase middle domain mpl - 6.3.2.45,6.3.2.8 ko:K01924,ko:K02558 ko00471,ko00550,ko01100,map00471,map00550,map01100 - R03193 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M PHJFGMMN_00032 411477.PARMER_03241 2.87e-214 590.0 COG0491@1|root,COG0491@2|Bacteria,4NE98@976|Bacteroidetes,2FQYG@200643|Bacteroidia,22XR4@171551|Porphyromonadaceae 976|Bacteroidetes S Metallo-beta-lactamase superfamily - - - - - - - - - - - - Lactamase_B PHJFGMMN_00034 411477.PARMER_03242 3.03e-92 269.0 COG2755@1|root,COG2755@2|Bacteria,4NQAK@976|Bacteroidetes 976|Bacteroidetes E Stress responsive alpha-beta barrel domain protein - - - - - - - - - - - - Dabb PHJFGMMN_00035 411477.PARMER_03243 0.0 1587.0 COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FNAR@200643|Bacteroidia,22WBH@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain nagZ2 - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - CHB_HEX_C_1,F5_F8_type_C,Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b PHJFGMMN_00036 411477.PARMER_03244 0.0 1636.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NJW1@976|Bacteroidetes,2FNET@200643|Bacteroidia,22WN6@171551|Porphyromonadaceae 976|Bacteroidetes EU Peptidase, S9A B C family, catalytic domain protein - - - - - - - - - - - - PD40,Peptidase_S9 PHJFGMMN_00037 1235803.C825_03064 1.64e-33 149.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 1235803.C825_03064|- - - - - - - - - - - - - - - - PHJFGMMN_00038 411477.PARMER_03250 0.0 1016.0 COG3634@1|root,COG3634@2|Bacteria,4NGJY@976|Bacteroidetes,2FM1S@200643|Bacteroidia,22WAT@171551|Porphyromonadaceae 976|Bacteroidetes C NADH dehydrogenase ahpF - - ko:K03387 - - - - ko00000,ko01000 - - - Pyr_redox_2,Thioredoxin_3 PHJFGMMN_00039 411477.PARMER_03251 1.74e-136 385.0 COG0450@1|root,COG0450@2|Bacteria,4NEDT@976|Bacteroidetes,2FMG5@200643|Bacteroidia,22W4F@171551|Porphyromonadaceae 976|Bacteroidetes O alkyl hydroperoxide reductase ahpC - 1.11.1.15 ko:K03386 ko04214,map04214 - - - ko00000,ko00001,ko01000,ko04147 - - - 1-cysPrx_C,AhpC-TSA PHJFGMMN_00040 999419.HMPREF1077_02141 1.71e-58 181.0 2EBGM@1|root,335H7@2|Bacteria,4NVJG@976|Bacteroidetes,2FUX7@200643|Bacteroidia,2316Y@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4884) - - - - - - - - - - - - DUF4884 PHJFGMMN_00041 411477.PARMER_03254 3.17e-176 490.0 COG1180@1|root,COG1180@2|Bacteria,4NHMK@976|Bacteroidetes,2FN1S@200643|Bacteroidia,22XWK@171551|Porphyromonadaceae 976|Bacteroidetes C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine pflA - 1.97.1.4 ko:K04069 - - R04710 - ko00000,ko01000 - - - Fer4_12,Radical_SAM PHJFGMMN_00042 411477.PARMER_03255 0.0 1489.0 COG1882@1|root,COG1882@2|Bacteria,4NDWW@976|Bacteroidetes,2FMC2@200643|Bacteroidia,22X3W@171551|Porphyromonadaceae 976|Bacteroidetes C Psort location Cytoplasmic, score 9.97 pflB - 2.3.1.54 ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 - R00212,R06987 RC00004,RC01181,RC02742,RC02833 ko00000,ko00001,ko01000 - - - Gly_radical,PFL-like PHJFGMMN_00043 411477.PARMER_03319 1.35e-21 110.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00044 411477.PARMER_03260 1.01e-108 313.0 2DW70@1|root,33YUD@2|Bacteria,4P4P0@976|Bacteroidetes,2FSIR@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_00045 411477.PARMER_03263 0.0 915.0 COG2433@1|root,COG2433@2|Bacteria,4PKWF@976|Bacteroidetes,2G069@200643|Bacteroidia,22XD0@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location OuterMembrane, score - - - - - - - - - - - - Porin_O_P PHJFGMMN_00046 411477.PARMER_03264 1.97e-316 860.0 COG3489@1|root,COG3489@2|Bacteria,4NGCP@976|Bacteroidetes,2G2XV@200643|Bacteroidia,22Y5N@171551|Porphyromonadaceae 976|Bacteroidetes S Imelysin - - - - - - - - - - - - Peptidase_M75 PHJFGMMN_00048 411477.PARMER_03265 0.0 982.0 COG3488@1|root,COG3488@2|Bacteria,4NGBS@976|Bacteroidetes,2FNKM@200643|Bacteroidia,22W7J@171551|Porphyromonadaceae 976|Bacteroidetes C Di-haem oxidoreductase, putative peroxidase - - - - - - - - - - - - DHOR PHJFGMMN_00049 411477.PARMER_03266 1.14e-297 811.0 COG3746@1|root,COG3746@2|Bacteria,4NI6X@976|Bacteroidetes,2FPGI@200643|Bacteroidia,22X0Z@171551|Porphyromonadaceae 976|Bacteroidetes P Phosphate-selective porin O and P - - - - - - - - - - - - Porin_O_P PHJFGMMN_00050 411477.PARMER_03267 2.4e-169 473.0 2B7EF@1|root,320I7@2|Bacteria,4NRYF@976|Bacteroidetes,2FQTT@200643|Bacteroidia,22YRP@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00051 411477.PARMER_03268 1.65e-289 789.0 COG0251@1|root,COG0251@2|Bacteria,4NEVA@976|Bacteroidetes,2FN38@200643|Bacteroidia,22X36@171551|Porphyromonadaceae 976|Bacteroidetes J translation initiation inhibitor, yjgF family - - - - - - - - - - - - Ribonuc_L-PSP PHJFGMMN_00052 411477.PARMER_03269 1.69e-168 470.0 COG2846@1|root,COG2846@2|Bacteria,4NMCR@976|Bacteroidetes,2FMRX@200643|Bacteroidia,22XMP@171551|Porphyromonadaceae 976|Bacteroidetes D Di-iron-containing protein involved in the repair of iron-sulfur clusters - - - ko:K07322 - - - - ko00000 - - - Hemerythrin PHJFGMMN_00053 411477.PARMER_03270 1.11e-139 395.0 COG2197@1|root,COG2197@2|Bacteria,4NNVV@976|Bacteroidetes,2FN9B@200643|Bacteroidia,22Y0C@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator, LuxR family - - - - - - - - - - - - GerE PHJFGMMN_00054 411477.PARMER_03271 2.83e-284 775.0 COG0251@1|root,COG0251@2|Bacteria,4NEVA@976|Bacteroidetes,2FN38@200643|Bacteroidia,22X36@171551|Porphyromonadaceae 976|Bacteroidetes J translation initiation inhibitor, yjgF family - - - - - - - - - - - - Ribonuc_L-PSP PHJFGMMN_00055 411477.PARMER_03272 0.0 2136.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00057 411477.PARMER_03274 9.11e-170 474.0 COG2846@1|root,COG2846@2|Bacteria,4NMCR@976|Bacteroidetes,2FMRX@200643|Bacteroidia,22XMP@171551|Porphyromonadaceae 976|Bacteroidetes D Di-iron-containing protein involved in the repair of iron-sulfur clusters - - - ko:K07322 - - - - ko00000 - - - Hemerythrin PHJFGMMN_00058 411477.PARMER_03275 2.52e-136 386.0 COG2197@1|root,COG2197@2|Bacteria,4NNVV@976|Bacteroidetes,2FN9B@200643|Bacteroidia,22Y0C@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator, LuxR family - - - - - - - - - - - - GerE PHJFGMMN_00059 411477.PARMER_03276 0.0 1923.0 COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,2FMCU@200643|Bacteroidia,22WVV@171551|Porphyromonadaceae 976|Bacteroidetes G Fibronectin type III-like domain - - 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - GH3 - F5_F8_type_C,Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C PHJFGMMN_00060 411477.PARMER_03277 6.21e-160 447.0 COG2199@1|root,COG3706@2|Bacteria,4NPU1@976|Bacteroidetes,2FNEU@200643|Bacteroidia,22XUT@171551|Porphyromonadaceae 976|Bacteroidetes T Carbohydrate-binding family 9 - - - - - - - - - - - - CBM9_2 PHJFGMMN_00061 411477.PARMER_03278 1.29e-151 426.0 COG1280@1|root,COG1280@2|Bacteria,4NMR9@976|Bacteroidetes,2FM4B@200643|Bacteroidia,22XRM@171551|Porphyromonadaceae 976|Bacteroidetes E Translocator protein, LysE family - - - - - - - - - - - - LysE PHJFGMMN_00062 411477.PARMER_03280 0.0 1053.0 COG3119@1|root,COG3119@2|Bacteria,4NFC9@976|Bacteroidetes,2FMH6@200643|Bacteroidia,22VWT@171551|Porphyromonadaceae 976|Bacteroidetes P Domain of unknown function - - - - - - - - - - - - DUF4994,Sulfatase PHJFGMMN_00065 411477.PARMER_03286 9.02e-84 246.0 COG3119@1|root,COG3119@2|Bacteria 2|Bacteria P arylsulfatase activity - - - - - - - - - - - - Sulfatase PHJFGMMN_00066 411477.PARMER_03288 0.0 2472.0 COG0046@1|root,COG0047@1|root,COG0046@2|Bacteria,COG0047@2|Bacteria,4NETY@976|Bacteroidetes,2FM2Z@200643|Bacteroidia,22W21@171551|Porphyromonadaceae 976|Bacteroidetes F Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate purL - 6.3.5.3 ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04463 RC00010,RC01160 ko00000,ko00001,ko00002,ko01000 - - - AIRS_C,GATase_5 PHJFGMMN_00067 411477.PARMER_03289 2.34e-140 396.0 COG3637@1|root,COG3637@2|Bacteria,4NR9K@976|Bacteroidetes,2FU82@200643|Bacteroidia,231DZ@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl,OMP_b-brl_2 PHJFGMMN_00068 411477.PARMER_03291 0.0 1329.0 COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FNAR@200643|Bacteroidia,22WBH@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b PHJFGMMN_00069 411477.PARMER_03292 0.0 863.0 COG3746@1|root,COG3746@2|Bacteria,4NIRE@976|Bacteroidetes,2FR58@200643|Bacteroidia,22X03@171551|Porphyromonadaceae 976|Bacteroidetes P phosphate-selective porin O and P - - - - - - - - - - - - Porin_O_P PHJFGMMN_00070 411477.PARMER_03293 1.01e-188 525.0 COG0226@1|root,COG0226@2|Bacteria,4NJGR@976|Bacteroidetes,2FMW1@200643|Bacteroidia,22X86@171551|Porphyromonadaceae 976|Bacteroidetes P Bacterial extracellular solute-binding protein pstS - - ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - PBP_like_2 PHJFGMMN_00072 411477.PARMER_03295 5.26e-259 710.0 COG2070@1|root,COG2070@2|Bacteria,4NF8Z@976|Bacteroidetes,2FMYA@200643|Bacteroidia,22X1K@171551|Porphyromonadaceae 976|Bacteroidetes S 2-nitropropane dioxygenase - - 1.3.1.9 ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00083 R04429,R04724,R04955,R04958,R04961,R04966,R04969,R07765 RC00052,RC00076 ko00000,ko00001,ko00002,ko01000,ko01004 - - - NMO PHJFGMMN_00073 411477.PARMER_03296 1.4e-90 265.0 2EFPT@1|root,339FT@2|Bacteria,4NWQF@976|Bacteroidetes,2FT7Q@200643|Bacteroidia,22YKQ@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 9.46 - - - - - - - - - - - - - PHJFGMMN_00074 411477.PARMER_03297 6.55e-126 358.0 COG1595@1|root,COG1595@2|Bacteria,4NSVA@976|Bacteroidetes,2FMT6@200643|Bacteroidia,22Y4K@171551|Porphyromonadaceae 976|Bacteroidetes K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_00075 411477.PARMER_03298 1.89e-75 226.0 2AEY5@1|root,314W0@2|Bacteria,4PJ4F@976|Bacteroidetes,2G1TP@200643|Bacteroidia,231AW@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00076 411477.PARMER_03299 0.0 1132.0 COG0539@1|root,COG1185@1|root,COG0539@2|Bacteria,COG1185@2|Bacteria,4NDW9@976|Bacteroidetes,2FNZK@200643|Bacteroidia,22WN9@171551|Porphyromonadaceae 976|Bacteroidetes J thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence rpsA - - ko:K02945 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - S1 PHJFGMMN_00077 411477.PARMER_03300 1.45e-55 173.0 2FFF9@1|root,347CS@2|Bacteria,4P64C@976|Bacteroidetes,2FTYY@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_00078 411477.PARMER_03302 3.32e-85 251.0 COG0745@1|root,COG0745@2|Bacteria,4PMV4@976|Bacteroidetes,2G0HF@200643|Bacteroidia,231PB@171551|Porphyromonadaceae 976|Bacteroidetes T cheY-homologous receiver domain - - - - - - - - - - - - Response_reg PHJFGMMN_00079 411477.PARMER_03303 2.97e-59 182.0 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation - - - ko:K03530 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding PHJFGMMN_00084 688246.Premu_0396 1.33e-307 882.0 COG0358@1|root,COG0358@2|Bacteria,4NGFP@976|Bacteroidetes,2FPG6@200643|Bacteroidia 976|Bacteroidetes L DNA primase - - - - - - - - - - - - DUF3854,zf-CHC2 PHJFGMMN_00085 1284775.HMPREF1640_02780 9.21e-31 108.0 COG1724@1|root,COG1724@2|Bacteria,4NY7C@976|Bacteroidetes,2FZIV@200643|Bacteroidia 976|Bacteroidetes N HicA toxin of bacterial toxin-antitoxin, - - - - - - - - - - - - HicA_toxin PHJFGMMN_00086 1284775.HMPREF1640_02775 2.52e-47 156.0 COG1598@1|root,COG1598@2|Bacteria,4NV7N@976|Bacteroidetes,2G2GS@200643|Bacteroidia 976|Bacteroidetes S PFAM Uncharacterised protein family UPF0150 - - - - - - - - - - - - - PHJFGMMN_00087 357276.EL88_22870 2.05e-56 181.0 2CBNH@1|root,32Z7U@2|Bacteria,4NVZI@976|Bacteroidetes,2FTZW@200643|Bacteroidia,4AVQE@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00088 357276.EL88_22860 5.63e-107 319.0 COG0616@1|root,COG0616@2|Bacteria,4NTQT@976|Bacteroidetes,2FUYW@200643|Bacteroidia,4ASU1@815|Bacteroidaceae 976|Bacteroidetes OU Peptidase family S49 - - - ko:K04773 - - - - ko00000,ko01000,ko01002 - - - Peptidase_S49 PHJFGMMN_00089 357276.EL88_22855 0.0 993.0 2E0B9@1|root,32VYH@2|Bacteria,4NT2Y@976|Bacteroidetes,2FTN4@200643|Bacteroidia,4ATRV@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00090 357276.EL88_22850 7.89e-72 224.0 2ECPI@1|root,336MA@2|Bacteria,4NMXR@976|Bacteroidetes,2G2ZT@200643|Bacteroidia,4ASM9@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00092 908612.HMPREF9720_2940 1.9e-29 123.0 2DZDR@1|root,32V81@2|Bacteria,4NPU4@976|Bacteroidetes,2FYHH@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00099 357276.EL88_22825 1.08e-97 291.0 2AD1K@1|root,312PR@2|Bacteria,4NPRM@976|Bacteroidetes,2FVGY@200643|Bacteroidia,4ASK8@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00100 357276.EL88_22820 0.0 876.0 28ICA@1|root,2Z8EP@2|Bacteria,4NFBS@976|Bacteroidetes,2FRMR@200643|Bacteroidia,4AQAJ@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00101 357276.EL88_22785 3.58e-38 129.0 2ES5W@1|root,32I7M@2|Bacteria,4PE4Q@976|Bacteroidetes,2FVZ0@200643|Bacteroidia,4ASV0@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00102 357276.EL88_22780 3.11e-270 746.0 28JJ1@1|root,2Z9C5@2|Bacteria,4NJEU@976|Bacteroidetes,2FSF2@200643|Bacteroidia,4AR6C@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00104 357276.EL88_22775 1.59e-122 360.0 28NS6@1|root,2ZBR8@2|Bacteria,4NMPZ@976|Bacteroidetes,2G2B9@200643|Bacteroidia,4AS8Y@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00105 357276.EL88_22770 3.33e-70 223.0 2BUG4@1|root,32PS5@2|Bacteria,4PAXM@976|Bacteroidetes,2FXZY@200643|Bacteroidia,4AU0X@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00107 742766.HMPREF9455_03101 2.03e-18 82.4 2DSW5@1|root,33HNM@2|Bacteria,4NYGK@976|Bacteroidetes,2FVZH@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00115 357276.EL88_22745 2.55e-279 834.0 COG0419@1|root,COG1196@1|root,COG0419@2|Bacteria,COG1196@2|Bacteria,4NF3E@976|Bacteroidetes,2FNYJ@200643|Bacteroidia,4ANM6@815|Bacteroidaceae 976|Bacteroidetes D Psort location OuterMembrane, score - - - - - - - - - - - - - PHJFGMMN_00117 357276.EL88_11220 2.66e-152 501.0 COG4926@1|root,COG4926@2|Bacteria,4NFC7@976|Bacteroidetes,2FP4F@200643|Bacteroidia,4AMNM@815|Bacteroidaceae 976|Bacteroidetes S Phage minor structural protein - - - - - - - - - - - - - PHJFGMMN_00120 411477.PARMER_02025 5.99e-63 222.0 COG3064@1|root,COG3064@2|Bacteria 2|Bacteria M translation initiation factor activity - - - - - - - - - - - - - PHJFGMMN_00122 411477.PARMER_02020 5.97e-13 72.0 COG0810@1|root,COG0810@2|Bacteria 2|Bacteria M energy transducer activity infB - - ko:K02519,ko:K03832 - - - - ko00000,ko02000,ko03012,ko03029 2.C.1.1 - - CarbopepD_reg_2,Gram_pos_anchor,HtaA,TonB_C,YSIRK_signal,YXWGXW PHJFGMMN_00123 411477.PARMER_02022 5.9e-217 602.0 2EJ7B@1|root,33CYF@2|Bacteria,4P5DE@976|Bacteroidetes,2FZ0J@200643|Bacteroidia,230RK@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00126 411477.PARMER_02020 4.71e-150 421.0 COG0810@1|root,COG0810@2|Bacteria 2|Bacteria M energy transducer activity infB - - ko:K02519,ko:K03832 - - - - ko00000,ko02000,ko03012,ko03029 2.C.1.1 - - CarbopepD_reg_2,Gram_pos_anchor,HtaA,TonB_C,YSIRK_signal,YXWGXW PHJFGMMN_00127 411477.PARMER_02018 6.16e-37 132.0 2DYZ9@1|root,34BVF@2|Bacteria,4P5EQ@976|Bacteroidetes,2FVG6@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - PHJFGMMN_00128 411477.PARMER_02015 5.3e-71 214.0 2C21S@1|root,342FA@2|Bacteria,4P3YR@976|Bacteroidetes,2FTNG@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_00129 435591.BDI_0904 9.1e-75 225.0 2DNV9@1|root,32ZB3@2|Bacteria,4NV7Y@976|Bacteroidetes,2FTAS@200643|Bacteroidia,230T2@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00130 679190.HMPREF0650_1967 1.53e-15 75.9 2EJ7V@1|root,33CZ1@2|Bacteria,4NYK6@976|Bacteroidetes 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00131 1122971.BAME01000006_gene882 1.26e-108 332.0 COG0582@1|root,COG0582@2|Bacteria,4NI5P@976|Bacteroidetes,2G04I@200643|Bacteroidia,2323I@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5 PHJFGMMN_00133 999419.HMPREF1077_02023 2.28e-249 685.0 COG0337@1|root,COG0337@2|Bacteria,4NGSS@976|Bacteroidetes,2FNVM@200643|Bacteroidia,22VVS@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) aroB - 4.2.3.4 ko:K01735 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03083 RC00847 ko00000,ko00001,ko00002,ko01000 - - - DHQ_synthase PHJFGMMN_00134 411477.PARMER_03308 0.0 1727.0 COG0013@1|root,COG0013@2|Bacteria,4NFHW@976|Bacteroidetes,2FN1R@200643|Bacteroidia,22XC2@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain alaS GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 ko:K01872 ko00970,map00970 M00359,M00360 R03038 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DHHA1,tRNA-synt_2c,tRNA_SAD PHJFGMMN_00135 411477.PARMER_03309 1.25e-237 653.0 COG0739@1|root,COG0739@2|Bacteria,4NGHH@976|Bacteroidetes,2FME3@200643|Bacteroidia,22X07@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase, M23 - - - - - - - - - - - - Peptidase_M23 PHJFGMMN_00136 411477.PARMER_03310 2.91e-74 223.0 COG0789@1|root,COG0789@2|Bacteria,4NSBD@976|Bacteroidetes,2FTI6@200643|Bacteroidia,22YFS@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator ycgE - - - - - - - - - - - MerR_1 PHJFGMMN_00137 411477.PARMER_03311 1.55e-91 267.0 COG0629@1|root,COG0629@2|Bacteria,4NT9M@976|Bacteroidetes,2FS0P@200643|Bacteroidia,22YIZ@171551|Porphyromonadaceae 976|Bacteroidetes L Domain of unknown function (DUF3127) - - - - - - - - - - - - DUF3127 PHJFGMMN_00138 411477.PARMER_03312 0.0 1484.0 COG0317@1|root,COG0317@2|Bacteria,4NESY@976|Bacteroidetes,2FMEE@200643|Bacteroidia,22VYB@171551|Porphyromonadaceae 976|Bacteroidetes KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance relA - 2.7.6.5 ko:K00951 ko00230,map00230 - R00429 RC00002,RC00078 ko00000,ko00001,ko01000 - - - ACT_4,HD_4,RelA_SpoT,TGS PHJFGMMN_00139 411477.PARMER_03313 0.0 1029.0 COG0741@1|root,COG1388@1|root,COG0741@2|Bacteria,COG1388@2|Bacteria,4NEKW@976|Bacteroidetes,2FM5V@200643|Bacteroidia,22VZV@171551|Porphyromonadaceae 976|Bacteroidetes M transglycosylase mltD - - ko:K08307 - - - - ko00000,ko01000,ko01011 - - - LysM,SLT PHJFGMMN_00140 411477.PARMER_03314 1.91e-183 509.0 28PR3@1|root,31KKX@2|Bacteria,4NQPF@976|Bacteroidetes,2FSHR@200643|Bacteroidia,22Y55@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - PHJFGMMN_00141 411477.PARMER_03315 2.7e-200 556.0 COG1475@1|root,COG1475@2|Bacteria,4NFZ9@976|Bacteroidetes,2FP81@200643|Bacteroidia,22WNK@171551|Porphyromonadaceae 976|Bacteroidetes K Belongs to the ParB family parB - - ko:K03497 - - - - ko00000,ko03000,ko03036,ko04812 - - - ParBc PHJFGMMN_00142 411477.PARMER_03316 7.36e-173 483.0 COG1192@1|root,COG1192@2|Bacteria,4NFEX@976|Bacteroidetes,2FMX2@200643|Bacteroidia,22W77@171551|Porphyromonadaceae 976|Bacteroidetes D Chromosome partitioning protein ParA soj - - ko:K03496 - - - - ko00000,ko03036,ko04812 - - - AAA_31 PHJFGMMN_00143 411477.PARMER_03317 1.33e-67 204.0 COG1569@1|root,COG1569@2|Bacteria,4NSFI@976|Bacteroidetes,2FV4N@200643|Bacteroidia 976|Bacteroidetes S PIN domain - - - - - - - - - - - - PIN_3 PHJFGMMN_00144 411477.PARMER_03319 0.0 2069.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00147 411477.PARMER_03322 0.0 1507.0 COG0358@1|root,COG5545@1|root,COG0358@2|Bacteria,COG5545@2|Bacteria,4NETK@976|Bacteroidetes,2FR42@200643|Bacteroidia,2303P@171551|Porphyromonadaceae 976|Bacteroidetes L Protein of unknown function (DUF3987) - - - - - - - - - - - - DUF3987,PriCT_1,VirE_N PHJFGMMN_00148 411477.PARMER_03325 4.56e-99 288.0 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation - - - - - - - - - - - - Bac_DNA_binding PHJFGMMN_00149 1235803.C825_01700 1.61e-44 144.0 298PA@1|root,2ZQYC@2|Bacteria,4P7SE@976|Bacteroidetes,2FVBS@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4248) - - - - - - - - - - - - DUF4248 PHJFGMMN_00150 411477.PARMER_03327 2.27e-119 340.0 COG1705@1|root,COG1705@2|Bacteria 2|Bacteria NU amidase activity - - - ko:K02395 - - - - ko00000,ko02035 - - - Glucosaminidase,Rod-binding PHJFGMMN_00152 999419.HMPREF1077_02000 3.19e-60 187.0 2ERVA@1|root,33JEG@2|Bacteria,4NYF4@976|Bacteroidetes,2FW34@200643|Bacteroidia,22Z1V@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00153 999419.HMPREF1077_01997 1.58e-208 577.0 COG1234@1|root,COG1234@2|Bacteria,4NE1K@976|Bacteroidetes,2FM13@200643|Bacteroidia,22WDF@171551|Porphyromonadaceae 976|Bacteroidetes S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA rnz - 3.1.26.11 ko:K00784 ko03013,map03013 - - - ko00000,ko00001,ko01000,ko03016 - - - Lactamase_B_2 PHJFGMMN_00154 411477.PARMER_03332 4.81e-276 755.0 COG1294@1|root,COG1294@2|Bacteria,4NHZU@976|Bacteroidetes,2FMIN@200643|Bacteroidia,22W6V@171551|Porphyromonadaceae 976|Bacteroidetes C Cytochrome C oxidase assembly protein cydB - 1.10.3.14 ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 - - Cyt_bd_oxida_II PHJFGMMN_00155 411477.PARMER_03333 0.0 1028.0 COG1271@1|root,COG1271@2|Bacteria,4NG7U@976|Bacteroidetes,2FMV6@200643|Bacteroidia,22W3V@171551|Porphyromonadaceae 976|Bacteroidetes C oxidase, subunit cydA - 1.10.3.14 ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 - - Cyt_bd_oxida_I PHJFGMMN_00156 411477.PARMER_03334 1.64e-68 207.0 2E3BY@1|root,32YBB@2|Bacteria,4NVYN@976|Bacteroidetes,2FUJP@200643|Bacteroidia,22YMH@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4492) - - - - - - - - - - - - DUF4492 PHJFGMMN_00157 411477.PARMER_03335 0.0 1036.0 COG0673@1|root,COG0673@2|Bacteria,4NEN5@976|Bacteroidetes,2FP28@200643|Bacteroidia,22ZVD@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA PHJFGMMN_00158 411477.PARMER_03336 6.74e-209 577.0 COG2152@1|root,COG2152@2|Bacteria,4NGDZ@976|Bacteroidetes,2FPFW@200643|Bacteroidia,22WNS@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 PHJFGMMN_00159 411477.PARMER_04088 0.0 1058.0 COG3666@1|root,COG3666@2|Bacteria,4NEDD@976|Bacteroidetes,2FNIQ@200643|Bacteroidia,22WUY@171551|Porphyromonadaceae 976|Bacteroidetes L COG3666 Transposase and inactivated derivatives - - - - - - - - - - - - DDE_Tnp_1,DDE_Tnp_1_6,DUF772 PHJFGMMN_00160 1235788.C802_01095 2.39e-12 61.6 2FGMM@1|root,348H9@2|Bacteria,4P6A0@976|Bacteroidetes,2FSB6@200643|Bacteroidia,4AQW0@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_00161 411477.PARMER_03337 2.98e-237 656.0 COG3595@1|root,COG3595@2|Bacteria,4NEUW@976|Bacteroidetes,2FV2Q@200643|Bacteroidia,22YZE@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00162 411477.PARMER_03338 2.38e-127 362.0 2EPCT@1|root,33GZF@2|Bacteria,4NZ8X@976|Bacteroidetes,2FVPB@200643|Bacteroidia,22Z27@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00163 411477.PARMER_03339 3.82e-128 364.0 COG1595@1|root,COG1595@2|Bacteria,4NFXX@976|Bacteroidetes,2FTUP@200643|Bacteroidia,22YDU@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_00164 1235803.C825_04737 1.37e-59 195.0 2C09N@1|root,2Z82F@2|Bacteria,4NF07@976|Bacteroidetes,2FPES@200643|Bacteroidia,22XCC@171551|Porphyromonadaceae 976|Bacteroidetes S NigD-like N-terminal OB domain - - - - - - - - - - - - NigD_C,NigD_N PHJFGMMN_00165 411477.PARMER_03341 1.5e-277 758.0 COG0763@1|root,COG0763@2|Bacteria,4NDW3@976|Bacteroidetes,2FPE5@200643|Bacteroidia,22WGC@171551|Porphyromonadaceae 976|Bacteroidetes M Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxB - 2.4.1.182 ko:K00748 ko00540,ko01100,map00540,map01100 M00060 R04606 RC00005,RC00059 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT19 - LpxB PHJFGMMN_00166 411477.PARMER_03342 6.65e-189 524.0 COG0496@1|root,COG0496@2|Bacteria,4NEJ5@976|Bacteroidetes,2FMRR@200643|Bacteroidia,22WSZ@171551|Porphyromonadaceae 976|Bacteroidetes S Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates surE - 3.1.3.5 ko:K03787 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 - R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 - - - SurE PHJFGMMN_00167 411477.PARMER_03343 8.06e-176 489.0 COG0745@1|root,COG0745@2|Bacteria,4NF1I@976|Bacteroidetes,2FNZV@200643|Bacteroidia,22WBV@171551|Porphyromonadaceae 976|Bacteroidetes K COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain rprY - - - - - - - - - - - Response_reg,Trans_reg_C PHJFGMMN_00168 411477.PARMER_03344 0.0 996.0 COG0642@1|root,COG2205@2|Bacteria,4NEFW@976|Bacteroidetes,2FPG5@200643|Bacteroidia,22WQ1@171551|Porphyromonadaceae 976|Bacteroidetes T ATPase histidine kinase DNA gyrase B HSP90 domain protein - - 2.7.13.3 ko:K07636 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA PHJFGMMN_00169 411477.PARMER_03345 9.54e-204 563.0 COG0204@1|root,COG0204@2|Bacteria,4NF25@976|Bacteroidetes,2FNJQ@200643|Bacteroidia,22XB4@171551|Porphyromonadaceae 976|Bacteroidetes I Acyltransferase - - - - - - - - - - - - Acyltransferase PHJFGMMN_00170 411477.PARMER_03346 7.81e-238 653.0 COG3176@1|root,COG3176@2|Bacteria,4PKEK@976|Bacteroidetes,2FKZ3@200643|Bacteroidia,22W0V@171551|Porphyromonadaceae 976|Bacteroidetes S Hemolysin - - - - - - - - - - - - Acetyltransf_5 PHJFGMMN_00171 411477.PARMER_03347 6.27e-142 400.0 COG0727@1|root,COG0727@2|Bacteria,4NEPX@976|Bacteroidetes,2FNXY@200643|Bacteroidia,22XM5@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3109) - - - - - - - - - - - - DUF3109 PHJFGMMN_00172 411477.PARMER_03348 1.75e-75 226.0 2CCSR@1|root,32RWC@2|Bacteria,4NSDM@976|Bacteroidetes,2FU2H@200643|Bacteroidia,22YGZ@171551|Porphyromonadaceae 976|Bacteroidetes S tigr02436 - - - - - - - - - - - - 23S_rRNA_IVP PHJFGMMN_00173 411477.PARMER_03349 0.0 1028.0 COG0696@1|root,COG0696@2|Bacteria,4NEQT@976|Bacteroidetes,2FMVJ@200643|Bacteroidia,22W4Q@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate gpmI - 5.4.2.12 ko:K15633 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000 - - - Metalloenzyme,Phosphodiest,iPGM_N PHJFGMMN_00174 411477.PARMER_03350 9.8e-167 466.0 COG1451@1|root,COG1451@2|Bacteria,4NNY6@976|Bacteroidetes,2FPFA@200643|Bacteroidia,22Y3J@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function DUF45 - - - ko:K07043 - - - - ko00000 - - - DUF45 PHJFGMMN_00175 411477.PARMER_03370 9.85e-19 100.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 411477.PARMER_03370|- - - - - - - - - - - - - - - - PHJFGMMN_00176 999419.HMPREF1077_01976 0.0 1456.0 COG1554@1|root,COG1554@2|Bacteria,4NFYU@976|Bacteroidetes,2FPE9@200643|Bacteroidia,22ZAF@171551|Porphyromonadaceae 976|Bacteroidetes G COG NOG26513 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_00177 411477.PARMER_03354 0.0 927.0 COG1966@1|root,COG1966@2|Bacteria,4NFPD@976|Bacteroidetes,2FM48@200643|Bacteroidia,22X1U@171551|Porphyromonadaceae 976|Bacteroidetes T Carbon starvation protein cstA - - ko:K06200 - - - - ko00000 - - - CstA,CstA_5TM PHJFGMMN_00178 411477.PARMER_03355 1.25e-92 271.0 COG1610@1|root,COG1610@2|Bacteria,4NQFI@976|Bacteroidetes,2FN46@200643|Bacteroidia,22Y3Y@171551|Porphyromonadaceae 976|Bacteroidetes S Glutamyl-tRNA amidotransferase - - - ko:K09117 - - - - ko00000 - - - YqeY PHJFGMMN_00179 411477.PARMER_03356 2.31e-312 852.0 COG0206@1|root,COG0206@2|Bacteria,4NF8N@976|Bacteroidetes,2FMJV@200643|Bacteroidia,22WFV@171551|Porphyromonadaceae 976|Bacteroidetes D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity ftsZ - - ko:K03531 ko04112,map04112 - - - ko00000,ko00001,ko02048,ko03036,ko04812 - - - FtsZ_C,Tubulin PHJFGMMN_00180 411477.PARMER_03357 1.55e-309 847.0 COG0849@1|root,COG0849@2|Bacteria,4NE0V@976|Bacteroidetes,2FMUG@200643|Bacteroidia,22X25@171551|Porphyromonadaceae 976|Bacteroidetes D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring ftsA - - ko:K03590 ko04112,map04112 - - - ko00000,ko00001,ko03036,ko04812 - - - FtsA,SHS2_FTSA PHJFGMMN_00181 999419.HMPREF1077_01971 1.81e-167 468.0 COG1589@1|root,COG1589@2|Bacteria,4NGPN@976|Bacteroidetes,2FME2@200643|Bacteroidia,22XZ6@171551|Porphyromonadaceae 976|Bacteroidetes M Cell division protein FtsQ ftsQ - - ko:K03589 ko04112,map04112 - - - ko00000,ko00001,ko03036 - - - FtsQ PHJFGMMN_00182 411477.PARMER_03360 0.0 951.0 COG0773@1|root,COG0773@2|Bacteria,4NE1V@976|Bacteroidetes,2FM6G@200643|Bacteroidia,22WMY@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the MurCDEF family murC - 6.3.2.8 ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 - R03193 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M PHJFGMMN_00183 411477.PARMER_03361 1.93e-266 729.0 COG0707@1|root,COG0707@2|Bacteria,4NE6D@976|Bacteroidetes,2FMND@200643|Bacteroidia,22X87@171551|Porphyromonadaceae 976|Bacteroidetes M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) murG - 2.4.1.227 ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 - R05032,R05662 RC00005,RC00049 ko00000,ko00001,ko01000,ko01011 - GT28 - Glyco_tran_28_C,Glyco_transf_28 PHJFGMMN_00184 411477.PARMER_03362 0.0 874.0 COG0772@1|root,COG0772@2|Bacteria,4NFIM@976|Bacteroidetes,2FM93@200643|Bacteroidia,22WW9@171551|Porphyromonadaceae 976|Bacteroidetes D Belongs to the SEDS family ftsW - - ko:K03588 ko04112,map04112 - - - ko00000,ko00001,ko02000,ko03036 2.A.103.1 - - FTSW_RODA_SPOVE PHJFGMMN_00185 411477.PARMER_03363 0.0 906.0 COG0771@1|root,COG0771@2|Bacteria,4NEFF@976|Bacteroidetes,2FP0X@200643|Bacteroidia,22VXQ@171551|Porphyromonadaceae 976|Bacteroidetes M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) murD - 6.3.2.9 ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 - R02783 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase_C,Mur_ligase_M PHJFGMMN_00186 411477.PARMER_03364 1.44e-294 805.0 COG0472@1|root,COG0472@2|Bacteria,4NE0T@976|Bacteroidetes,2FMC3@200643|Bacteroidia,22WEF@171551|Porphyromonadaceae 976|Bacteroidetes M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan mraY - 2.7.8.13 ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 - R05629,R05630 RC00002,RC02753 ko00000,ko00001,ko01000,ko01011 9.B.146 - - Glycos_transf_4,MraY_sig1 PHJFGMMN_00187 411477.PARMER_03365 0.0 961.0 COG0769@1|root,COG0769@2|Bacteria,4NE9W@976|Bacteroidetes,2FM8E@200643|Bacteroidia,22W0E@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan murE - 6.3.2.13 ko:K01928 ko00300,ko00550,map00300,map00550 - R02788 RC00064,RC00090 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M PHJFGMMN_00188 411477.PARMER_03366 0.0 1456.0 COG0768@1|root,COG2815@1|root,COG0768@2|Bacteria,COG2815@2|Bacteria,4NERV@976|Bacteroidetes,2FM0U@200643|Bacteroidia,22WNY@171551|Porphyromonadaceae 976|Bacteroidetes M Penicillin-binding protein, transpeptidase domain protein ftsI - 3.4.16.4 ko:K03587 ko00550,ko01501,map00550,map01501 - - - ko00000,ko00001,ko01000,ko01011,ko03036 - - - PASTA,PBP_dimer,Transpeptidase PHJFGMMN_00189 999419.HMPREF1077_01963 8.39e-68 206.0 2E4WB@1|root,32ZQF@2|Bacteria,4NUMY@976|Bacteroidetes,2FSKJ@200643|Bacteroidia,22YNN@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_00190 411477.PARMER_03368 6.52e-219 604.0 COG0275@1|root,COG0275@2|Bacteria,4NFQB@976|Bacteroidetes,2FMPT@200643|Bacteroidia,22W13@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA rsmH GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 ko:K03438 - - - - ko00000,ko01000,ko03009 - - - Methyltransf_5 PHJFGMMN_00191 411477.PARMER_03370 0.0 2169.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 411477.PARMER_03370|- - - - - - - - - - - - - - - - PHJFGMMN_00192 411477.PARMER_03371 1.45e-205 570.0 COG5464@1|root,COG5464@2|Bacteria,4NGSI@976|Bacteroidetes,2FN70@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - PDDEXK_2 PHJFGMMN_00193 999419.HMPREF1077_01959 2.22e-278 763.0 COG4591@1|root,COG4591@2|Bacteria,4NG04@976|Bacteroidetes,2FNHB@200643|Bacteroidia,22X1B@171551|Porphyromonadaceae 976|Bacteroidetes M Efflux ABC transporter, permease protein lolE - - ko:K09808,ko:K09815 ko02010,map02010 M00242,M00255 - - ko00000,ko00001,ko00002,ko02000 3.A.1.125,3.A.1.15.3,3.A.1.15.5 - - FtsX,MacB_PCD PHJFGMMN_00194 411477.PARMER_03373 2.67e-69 209.0 COG0858@1|root,COG0858@2|Bacteria,4NSQJ@976|Bacteroidetes,2FT27@200643|Bacteroidia,22YGP@171551|Porphyromonadaceae 976|Bacteroidetes J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA rbfA - - ko:K02834 - - - - ko00000,ko03009 - - - RBFA PHJFGMMN_00195 411477.PARMER_03374 3.05e-149 419.0 COG4122@1|root,COG4122@2|Bacteria,4NH42@976|Bacteroidetes,2FM5S@200643|Bacteroidia,22WC1@171551|Porphyromonadaceae 976|Bacteroidetes S O-Methyltransferase - - 2.1.1.104 ko:K00588 ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110 M00039,M00350 R01942,R06578 RC00003,RC00392 ko00000,ko00001,ko00002,ko01000 - - - Methyltransf_3 PHJFGMMN_00196 411477.PARMER_03375 0.0 944.0 COG0469@1|root,COG0469@2|Bacteria,4NEEU@976|Bacteroidetes,2FNU3@200643|Bacteroidia,22WAP@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the pyruvate kinase family pyk - 2.7.1.40 ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 M00001,M00002,M00049,M00050 R00200,R00430,R01138,R01858,R02320 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - PK,PK_C PHJFGMMN_00197 411477.PARMER_03376 5.83e-100 290.0 COG0757@1|root,COG0757@2|Bacteria,4NNHU@976|Bacteroidetes,2FR57@200643|Bacteroidia,22XWF@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes a trans-dehydration via an enolate intermediate aroQ - 4.2.1.10 ko:K03786 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03084 RC00848 ko00000,ko00001,ko00002,ko01000 - - - DHquinase_II PHJFGMMN_00198 411477.PARMER_03377 1.42e-214 592.0 COG4974@1|root,COG4974@2|Bacteria,4NE0E@976|Bacteroidetes,2FP3B@200643|Bacteroidia,22WQE@171551|Porphyromonadaceae 976|Bacteroidetes D Belongs to the 'phage' integrase family. XerC subfamily xerC - - ko:K04763 - - - - ko00000,ko03036 - - - Phage_int_SAM_1,Phage_integrase PHJFGMMN_00199 411477.PARMER_03378 0.0 1329.0 COG0448@1|root,COG0448@2|Bacteria,4PKFG@976|Bacteroidetes,2G3FA@200643|Bacteroidia,22VWS@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF4954) - - - - - - - - - - - - DUF4954 PHJFGMMN_00200 411477.PARMER_03379 1.77e-280 768.0 COG2262@1|root,COG2262@2|Bacteria,4NF0P@976|Bacteroidetes,2FM9T@200643|Bacteroidia,22W7M@171551|Porphyromonadaceae 976|Bacteroidetes S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis hflX - - ko:K03665 - - - - ko00000,ko03009 - - - GTP-bdg_M,GTP-bdg_N,MMR_HSR1 PHJFGMMN_00201 999419.HMPREF1077_01950 2.36e-305 846.0 COG5337@1|root,COG5337@2|Bacteria,4NEH2@976|Bacteroidetes 976|Bacteroidetes M sodium ion export across plasma membrane - - - - - - - - - - - - CHB_HEX_C_1,CotH,Fn3_assoc,LTD PHJFGMMN_00202 411477.PARMER_03381 0.0 1252.0 COG3250@1|root,COG3250@2|Bacteria,4NE7H@976|Bacteroidetes,2FNT8@200643|Bacteroidia,22VUE@171551|Porphyromonadaceae 976|Bacteroidetes G COG COG3250 Beta-galactosidase beta-glucuronidase csxA_4 - - - - - - - - - - - Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N PHJFGMMN_00203 411477.PARMER_03382 2.52e-240 659.0 COG3250@1|root,COG3250@2|Bacteria,4NE7H@976|Bacteroidetes,2FNT8@200643|Bacteroidia,22VUE@171551|Porphyromonadaceae 976|Bacteroidetes G COG COG3250 Beta-galactosidase beta-glucuronidase csxA_4 - - - - - - - - - - - Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N PHJFGMMN_00204 411477.PARMER_03383 0.0 921.0 COG0644@1|root,COG0644@2|Bacteria,4NJ0Z@976|Bacteroidetes,2FMSG@200643|Bacteroidia,22XHB@171551|Porphyromonadaceae 976|Bacteroidetes C FAD dependent oxidoreductase - - - - - - - - - - - - FAD_oxidored PHJFGMMN_00205 411477.PARMER_03384 0.0 996.0 COG0702@1|root,COG0702@2|Bacteria,4NEDB@976|Bacteroidetes,2FPB4@200643|Bacteroidia,23048@171551|Porphyromonadaceae 976|Bacteroidetes GM SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_00206 411477.PARMER_03385 0.0 2137.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22W07@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor plug domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_00207 411477.PARMER_03386 5.64e-227 625.0 COG3712@1|root,COG3712@2|Bacteria,4NKTC@976|Bacteroidetes,2FMS6@200643|Bacteroidia,22XRQ@171551|Porphyromonadaceae 976|Bacteroidetes PT COG3712 Fe2 -dicitrate sensor, membrane component - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_00208 999419.HMPREF1077_01944 2.69e-157 441.0 COG1595@1|root,COG1595@2|Bacteria,4NR7M@976|Bacteroidetes,2FRPH@200643|Bacteroidia,22Y7V@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_00209 411477.PARMER_03389 3.66e-41 135.0 2EJQT@1|root,33DFM@2|Bacteria,4NY43@976|Bacteroidetes,2FVKG@200643|Bacteroidia,22Z2Q@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00210 411477.PARMER_03390 0.0 1527.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMQ9@200643|Bacteroidia,22XGF@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 PHJFGMMN_00211 411477.PARMER_03391 2.48e-174 486.0 COG0340@1|root,COG0340@2|Bacteria,4NHCH@976|Bacteroidetes,2FMM7@200643|Bacteroidia,22XZH@171551|Porphyromonadaceae 976|Bacteroidetes H Biotin/lipoate A/B protein ligase family birA - 6.3.4.15 ko:K03524 ko00780,ko01100,map00780,map01100 - R01074,R05145 RC00043,RC00070,RC00096,RC02896 ko00000,ko00001,ko01000,ko03000 - - - BPL_LplA_LipB PHJFGMMN_00212 411477.PARMER_03392 4.29e-85 250.0 COG2315@1|root,COG2315@2|Bacteria,4NS6J@976|Bacteroidetes,2FTTX@200643|Bacteroidia,22YG6@171551|Porphyromonadaceae 976|Bacteroidetes S YjbR - - - - - - - - - - - - YjbR PHJFGMMN_00213 999419.HMPREF1077_01939 3.17e-87 256.0 COG0792@1|root,COG0792@2|Bacteria,4NS7E@976|Bacteroidetes,2FSN9@200643|Bacteroidia,22YE3@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the UPF0102 family - - - ko:K07460 - - - - ko00000 - - - UPF0102 PHJFGMMN_00214 999419.HMPREF1077_01938 4.54e-49 155.0 2EP0Q@1|root,33GMJ@2|Bacteria,4NY4V@976|Bacteroidetes,2FTU4@200643|Bacteroidia,22YXW@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_00215 411477.PARMER_03395 2.65e-102 296.0 COG0590@1|root,COG0590@2|Bacteria,4NNJ2@976|Bacteroidetes,2FSMJ@200643|Bacteroidia,22XW1@171551|Porphyromonadaceae 976|Bacteroidetes FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) tadA - 3.5.4.33 ko:K11991 - - R10223 RC00477 ko00000,ko01000,ko03016 - - - MafB19-deam PHJFGMMN_00216 411477.PARMER_03396 4.51e-46 149.0 2EIZ3@1|root,33CQB@2|Bacteria,4NZDB@976|Bacteroidetes,2FVSS@200643|Bacteroidia,22YZX@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4834) - - - - - - - - - - - - DUF4834 PHJFGMMN_00217 999419.HMPREF1077_01935 1.01e-160 451.0 COG1183@1|root,COG1183@2|Bacteria,4NNUZ@976|Bacteroidetes,2FPNM@200643|Bacteroidia,22XNC@171551|Porphyromonadaceae 976|Bacteroidetes I Belongs to the CDP-alcohol phosphatidyltransferase class-I family pssA - 2.7.8.8 ko:K17103 ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110 M00093 R01800 RC00002,RC00017,RC02795 ko00000,ko00001,ko00002,ko01000 - - - CDP-OH_P_transf PHJFGMMN_00218 411477.PARMER_03398 1.51e-155 436.0 COG0688@1|root,COG0688@2|Bacteria,4NFU1@976|Bacteroidetes,2FMVT@200643|Bacteroidia,22W27@171551|Porphyromonadaceae 976|Bacteroidetes I Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) psd - 4.1.1.65 ko:K01613 ko00564,ko01100,ko01110,map00564,map01100,map01110 M00093 R02055 RC00299 ko00000,ko00001,ko00002,ko01000 - - - PS_Dcarbxylase PHJFGMMN_00219 411477.PARMER_03399 0.0 2142.0 COG1074@1|root,COG1074@2|Bacteria,4NEX4@976|Bacteroidetes,2FMHG@200643|Bacteroidia,22W5V@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the helicase family. UvrD subfamily addA - - - - - - - - - - - Cas_Cas4,PDDEXK_1,UvrD-helicase,UvrD_C PHJFGMMN_00220 411477.PARMER_03400 9.19e-76 226.0 COG0023@1|root,COG0023@2|Bacteria,4NS6M@976|Bacteroidetes,2FTIA@200643|Bacteroidia,22Y4X@171551|Porphyromonadaceae 976|Bacteroidetes J Translation initiation factor - - - ko:K03113 ko03013,map03013 - - - ko00000,ko00001,ko03012 - - - SUI1 PHJFGMMN_00221 411477.PARMER_03401 4.3e-111 319.0 COG0245@1|root,COG0245@2|Bacteria,4NP0N@976|Bacteroidetes,2FNVA@200643|Bacteroidia,22XNK@171551|Porphyromonadaceae 976|Bacteroidetes I Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) ispF - 4.6.1.12 ko:K01770 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05637 RC00002,RC01440 ko00000,ko00001,ko00002,ko01000 - - - YgbB PHJFGMMN_00222 411477.PARMER_03402 7.5e-283 772.0 COG2067@1|root,COG2067@2|Bacteria,4NDZW@976|Bacteroidetes,2FPVJ@200643|Bacteroidia,22W00@171551|Porphyromonadaceae 976|Bacteroidetes I Psort location OuterMembrane, score porV - - - - - - - - - - - - PHJFGMMN_00223 411477.PARMER_03403 6.66e-196 544.0 COG0382@1|root,COG0382@2|Bacteria,4NIRK@976|Bacteroidetes,2FMK9@200643|Bacteroidia,2306J@171551|Porphyromonadaceae 976|Bacteroidetes H UbiA prenyltransferase family - - - - - - - - - - - - UbiA PHJFGMMN_00224 411477.PARMER_03404 5.56e-142 400.0 COG0560@1|root,COG0560@2|Bacteria,4NRRM@976|Bacteroidetes,2FTYR@200643|Bacteroidia,231E0@171551|Porphyromonadaceae 976|Bacteroidetes E haloacid dehalogenase-like hydrolase - - - - - - - - - - - - GtrA,HAD PHJFGMMN_00225 411477.PARMER_03405 3.36e-308 840.0 2DPNF@1|root,332RX@2|Bacteria,4NWH8@976|Bacteroidetes,2FXPC@200643|Bacteroidia,2308N@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - PHJFGMMN_00226 411477.PARMER_03406 0.0 2233.0 COG1572@1|root,COG1572@2|Bacteria,4NDY7@976|Bacteroidetes,2FMIV@200643|Bacteroidia,22WVT@171551|Porphyromonadaceae 976|Bacteroidetes S Peptidase family C25 porU - - - - - - - - - - - Peptidase_C25 PHJFGMMN_00227 411477.PARMER_03407 7.14e-142 400.0 COG0179@1|root,COG0179@2|Bacteria,4NGCT@976|Bacteroidetes,2FPPX@200643|Bacteroidia,22W4P@171551|Porphyromonadaceae 976|Bacteroidetes Q 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase fahA - - - - - - - - - - - FAA_hydrolase PHJFGMMN_00228 411477.PARMER_03408 1.51e-153 431.0 COG2344@1|root,COG2344@2|Bacteria,4NIIF@976|Bacteroidetes,2FKZF@200643|Bacteroidia,22WX5@171551|Porphyromonadaceae 976|Bacteroidetes K Modulates transcription in response to changes in cellular NADH NAD( ) redox state rex - - ko:K01926 - - - - ko00000,ko03000 - - - CoA_binding,Put_DNA-bind_N PHJFGMMN_00230 411477.PARMER_03412 0.0 2216.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 411477.PARMER_03412|- - - - - - - - - - - - - - - - PHJFGMMN_00231 393921.HQ45_01930 3e-75 224.0 2E0PI@1|root,32W8A@2|Bacteria,4NTTY@976|Bacteroidetes,2G2MZ@200643|Bacteroidia,231XP@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00232 411479.BACUNI_01747 1.17e-38 129.0 2D860@1|root,32TQH@2|Bacteria,4NSAU@976|Bacteroidetes,2FTTD@200643|Bacteroidia,4ARUI@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00233 411479.BACUNI_01748 6.56e-48 152.0 2BZ20@1|root,32TVV@2|Bacteria,4NSUF@976|Bacteroidetes,2FTVM@200643|Bacteroidia,4ARQW@815|Bacteroidaceae 976|Bacteroidetes S COG NOG33922 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_00234 393921.HQ45_01945 1.29e-96 281.0 28KU3@1|root,2ZAB1@2|Bacteria,4NHK3@976|Bacteroidetes,2FMYR@200643|Bacteroidia,22YBE@171551|Porphyromonadaceae 976|Bacteroidetes S PcfK-like protein - - - - - - - - - - - - PcfK PHJFGMMN_00235 411479.BACUNI_01750 1.09e-315 858.0 28JQ1@1|root,2Z9FZ@2|Bacteria,4NFNV@976|Bacteroidetes,2FMFK@200643|Bacteroidia,4AKH0@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - PcfJ PHJFGMMN_00236 411479.BACUNI_01751 1.53e-56 175.0 2BGWU@1|root,313AM@2|Bacteria,4NS25@976|Bacteroidetes,2G3B3@200643|Bacteroidia,4AWCV@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00237 393921.HQ45_01960 2.51e-41 136.0 2DZP0@1|root,32VF2@2|Bacteria,4NSIP@976|Bacteroidetes,2FTWX@200643|Bacteroidia,230JF@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function, B. Theta Gene description (DUF3873) - - - - - - - - - - - - DUF3873 PHJFGMMN_00238 411479.BACUNI_01753 1.5e-68 207.0 2BFN9@1|root,329GN@2|Bacteria,4NQYN@976|Bacteroidetes,2FT6V@200643|Bacteroidia,4ARH1@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00239 411479.BACUNI_01754 9.75e-61 187.0 28P3F@1|root,30H2V@2|Bacteria,4NNJK@976|Bacteroidetes,2G38T@200643|Bacteroidia,4AWBV@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00240 411479.BACUNI_01756 1.88e-47 151.0 2ETW1@1|root,32SVZ@2|Bacteria,4NSRH@976|Bacteroidetes,2G2IP@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00241 411479.BACUNI_01757 2.51e-125 356.0 COG3772@1|root,COG3772@2|Bacteria,4NHIE@976|Bacteroidetes,2FQ7P@200643|Bacteroidia,4AKS1@815|Bacteroidaceae 976|Bacteroidetes S lysozyme - - 3.2.1.17 ko:K01185 - - - - ko00000,ko01000 - - - Phage_lysozyme PHJFGMMN_00242 411479.BACUNI_01758 6.74e-122 347.0 28M8P@1|root,2ZAMS@2|Bacteria,4NKY2@976|Bacteroidetes,2FP2C@200643|Bacteroidia,4ANMK@815|Bacteroidaceae 976|Bacteroidetes S COG NOG28378 non supervised orthologous group - - - - - - - - - - - - DUF3872 PHJFGMMN_00243 411479.BACUNI_01759 9.28e-219 603.0 COG0358@1|root,COG0358@2|Bacteria,4NH5X@976|Bacteroidetes,2FMS3@200643|Bacteroidia,4AMNB@815|Bacteroidaceae 976|Bacteroidetes L CHC2 zinc finger domain protein - - - - - - - - - - - - Toprim_2,zf-CHC2 PHJFGMMN_00244 411479.BACUNI_01760 1.08e-136 386.0 28JHB@1|root,2Z9AW@2|Bacteria,4NFVA@976|Bacteroidetes,2FPHI@200643|Bacteroidia,4APDX@815|Bacteroidaceae 976|Bacteroidetes S COG NOG19079 non supervised orthologous group - - - - - - - - - - - - TraO PHJFGMMN_00245 411479.BACUNI_01762 1.16e-238 655.0 COG3504@1|root,COG3504@2|Bacteria,4NH1R@976|Bacteroidetes,2FMQ5@200643|Bacteroidia,4AM07@815|Bacteroidaceae 976|Bacteroidetes U Conjugative transposon TraN protein - - - - - - - - - - - - DUF4138 PHJFGMMN_00246 411479.BACUNI_01763 8.1e-299 818.0 28HNW@1|root,2Z7X2@2|Bacteria,4NG2R@976|Bacteroidetes,2FMTP@200643|Bacteroidia,4AKAR@815|Bacteroidaceae 976|Bacteroidetes S Conjugative transposon TraM protein traM - - - - - - - - - - - Transposon_TraM PHJFGMMN_00247 411479.BACUNI_01764 3.96e-69 208.0 29QHB@1|root,30BGS@2|Bacteria,4NNV2@976|Bacteroidetes,2FT66@200643|Bacteroidia,4ARGF@815|Bacteroidaceae 976|Bacteroidetes S Protein of unknown function (DUF3989) - - - - - - - - - - - - DUF3989 PHJFGMMN_00248 1121098.HMPREF1534_03457 4.35e-144 406.0 COG3701@1|root,COG3701@2|Bacteria,4NFVT@976|Bacteroidetes,2FMF8@200643|Bacteroidia,4AK61@815|Bacteroidaceae 976|Bacteroidetes U Conjugative transposon TraK protein traK - - - - - - - - - - - VirB8 PHJFGMMN_00249 411479.BACUNI_01766 6.78e-225 621.0 28IE2@1|root,2Z8G6@2|Bacteria,4NFI5@976|Bacteroidetes,2FMZM@200643|Bacteroidia,4AKJK@815|Bacteroidaceae 976|Bacteroidetes S Conjugative transposon TraJ protein traJ - - - - - - - - - - - CtnDOT_TraJ PHJFGMMN_00250 393921.HQ45_02025 3.94e-116 336.0 COG5314@1|root,COG5314@2|Bacteria,4NF40@976|Bacteroidetes,2FNDM@200643|Bacteroidia,22WY1@171551|Porphyromonadaceae 976|Bacteroidetes U Domain of unknown function (DUF4141) - - - - - - - - - - - - DUF4141 PHJFGMMN_00251 483215.BACFIN_05292 1.76e-86 254.0 2CA6G@1|root,2ZCDX@2|Bacteria,4NMCN@976|Bacteroidetes,2FRYQ@200643|Bacteroidia,4AQIX@815|Bacteroidaceae 976|Bacteroidetes S COG NOG30362 non supervised orthologous group - - - - - - - - - - - - DUF3876 PHJFGMMN_00252 411479.BACUNI_01769 0.0 1656.0 COG3451@1|root,COG3451@2|Bacteria,4NER7@976|Bacteroidetes,2FM54@200643|Bacteroidia,4AMGR@815|Bacteroidaceae 976|Bacteroidetes U Conjugation system ATPase, TraG family - - - - - - - - - - - - AAA_10,DUF3875,DUF87 PHJFGMMN_00253 411479.BACUNI_01770 1.82e-71 215.0 293NS@1|root,2ZR4G@2|Bacteria,4NP3K@976|Bacteroidetes,2FSK2@200643|Bacteroidia,4AR5C@815|Bacteroidaceae 976|Bacteroidetes S COG NOG30259 non supervised orthologous group - - - - - - - - - - - - DUF4133 PHJFGMMN_00254 411479.BACUNI_01771 4.44e-62 191.0 2AV4I@1|root,31KUP@2|Bacteria,4NQM2@976|Bacteroidetes,2FT2M@200643|Bacteroidia,4AR9Q@815|Bacteroidaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - DUF4134 PHJFGMMN_00255 411479.BACUNI_01773 8.25e-166 464.0 28JK3@1|root,2Z9D0@2|Bacteria,4NKB8@976|Bacteroidetes,2FMWH@200643|Bacteroidia,4AP1T@815|Bacteroidaceae 976|Bacteroidetes S Conjugal transfer protein traD - - - - - - - - - - - - - PHJFGMMN_00256 411479.BACUNI_01775 2.2e-79 236.0 2C076@1|root,315GF@2|Bacteria,4PJP2@976|Bacteroidetes,2FSI5@200643|Bacteroidia,4AR83@815|Bacteroidaceae 976|Bacteroidetes S Protein of unknown function (DUF3408) - - - - - - - - - - - - DUF3408 PHJFGMMN_00257 411479.BACUNI_01776 1.47e-100 291.0 2E6X0@1|root,331GG@2|Bacteria,4NUUN@976|Bacteroidetes,2FQ57@200643|Bacteroidia,4AQ2W@815|Bacteroidaceae 976|Bacteroidetes S Protein of unknown function (DUF3408) - - - - - - - - - - - - DUF3408 PHJFGMMN_00258 411479.BACUNI_01777 5.22e-176 491.0 COG1192@1|root,COG1192@2|Bacteria,4NGV8@976|Bacteroidetes,2FMZX@200643|Bacteroidia,4AKS6@815|Bacteroidaceae 976|Bacteroidetes D COG NOG26689 non supervised orthologous group - - - - - - - - - - - - AAA_31,CbiA PHJFGMMN_00259 411479.BACUNI_01778 1.61e-57 177.0 29YX8@1|root,30KTX@2|Bacteria,4P9RB@976|Bacteroidetes,2FVBU@200643|Bacteroidia,4AU44@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_00260 1287476.HMPREF1651_06350 6.34e-94 274.0 2BXUM@1|root,2Z8XW@2|Bacteria,4NMWD@976|Bacteroidetes,2FMH8@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00261 1077285.AGDG01000032_gene4302 5.73e-283 775.0 COG3843@1|root,COG3843@2|Bacteria,4NG66@976|Bacteroidetes,2FMZN@200643|Bacteroidia,4AMDR@815|Bacteroidaceae 976|Bacteroidetes U Relaxase mobilization nuclease domain protein - - - - - - - - - - - - Relaxase PHJFGMMN_00262 1077285.AGDG01000032_gene4301 1.21e-218 617.0 COG3505@1|root,COG3505@2|Bacteria,4NFHI@976|Bacteroidetes,2FMIB@200643|Bacteroidia,4AKFZ@815|Bacteroidaceae 976|Bacteroidetes U COG COG3505 Type IV secretory pathway, VirD4 components - - - - - - - - - - - - T4SS-DNA_transf,TraG-D_C,YWFCY PHJFGMMN_00263 357276.EL88_13655 0.0 1137.0 COG3344@1|root,COG3344@2|Bacteria,4NGGU@976|Bacteroidetes,2FQ8T@200643|Bacteroidia,4AMV3@815|Bacteroidaceae 976|Bacteroidetes L Reverse transcriptase (RNA-dependent DNA polymerase) - - 2.7.7.49 ko:K00986 - - - - ko00000,ko01000 - - - GIIM,HNH,RVT_1,RVT_N PHJFGMMN_00264 1121101.HMPREF1532_04165 4.47e-276 755.0 COG3505@1|root,COG3505@2|Bacteria,4NFHI@976|Bacteroidetes,2FMIB@200643|Bacteroidia,4AKFZ@815|Bacteroidaceae 976|Bacteroidetes U COG COG3505 Type IV secretory pathway, VirD4 components - - - - - - - - - - - - T4SS-DNA_transf,TraG-D_C,YWFCY PHJFGMMN_00265 762982.HMPREF9442_02927 2.67e-132 376.0 2BF77@1|root,328ZR@2|Bacteria,4NRP1@976|Bacteroidetes,2FX7X@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00266 762982.HMPREF9442_01693 1.68e-272 746.0 COG1670@1|root,COG1670@2|Bacteria,4NI5A@976|Bacteroidetes,2FNHY@200643|Bacteroidia 976|Bacteroidetes J Acetyltransferase, gnat family - - - - - - - - - - - - Acetyltransf_3 PHJFGMMN_00267 626522.GCWU000325_02044 8.32e-136 385.0 28KSX@1|root,2Z89V@2|Bacteria,4NJU0@976|Bacteroidetes,2FPWD@200643|Bacteroidia 976|Bacteroidetes S RteC protein rteC - - - - - - - - - - - RteC PHJFGMMN_00268 626522.GCWU000325_02042 1.06e-100 291.0 COG0262@1|root,COG0262@2|Bacteria,4NIGC@976|Bacteroidetes,2FMEN@200643|Bacteroidia 976|Bacteroidetes H dihydrofolate reductase family protein K00287 - - - - - - - - - - - - RibD_C PHJFGMMN_00269 1287476.HMPREF1651_09210 6.34e-311 848.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMCJ@200643|Bacteroidia 976|Bacteroidetes T Sigma-54 interaction domain protein zraR - - ko:K07713 ko02020,map02020 M00499 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat PHJFGMMN_00270 1401078.HMPREF2140_04145 0.0 1439.0 COG0642@1|root,COG0745@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,4NFEF@976|Bacteroidetes,2FNF0@200643|Bacteroidia 976|Bacteroidetes T ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - - - - - - - - - - HATPase_c,HisKA,Response_reg PHJFGMMN_00271 1122971.BAME01000105_gene5942 0.0 1255.0 COG0480@1|root,COG0480@2|Bacteria,4NGRM@976|Bacteroidetes,2FP30@200643|Bacteroidia,22XI9@171551|Porphyromonadaceae 976|Bacteroidetes J Elongation Factor G, domain II tetP - - ko:K18220 - - - - br01600,ko00000,ko01504 - - - EFG_C,EFG_II,EFG_IV,GTP_EFTU PHJFGMMN_00272 679189.HMPREF9019_0232 0.0 3667.0 COG0553@1|root,COG0827@1|root,COG4646@1|root,COG0553@2|Bacteria,COG0827@2|Bacteria,COG4646@2|Bacteria,4NEQG@976|Bacteroidetes,2FMSW@200643|Bacteroidia 976|Bacteroidetes L Helicase C-terminal domain protein - - - - - - - - - - - - Helicase_C,N6_Mtase,SNF2_N PHJFGMMN_00273 667015.Bacsa_2533 2.25e-100 291.0 2BWP0@1|root,2Z84G@2|Bacteria,4NJQP@976|Bacteroidetes,2FMJA@200643|Bacteroidia,4ANYE@815|Bacteroidaceae 976|Bacteroidetes S COG NOG19108 non supervised orthologous group - - - - - - - - - - - - DUF1896 PHJFGMMN_00274 667015.Bacsa_2532 0.0 1333.0 COG0550@1|root,COG0550@2|Bacteria,4NE6R@976|Bacteroidetes,2FMKQ@200643|Bacteroidia,4AKJT@815|Bacteroidaceae 976|Bacteroidetes L COG0550 Topoisomerase IA - - 5.99.1.2 ko:K03169 - - - - ko00000,ko01000,ko03032 - - - Topoisom_bac,Toprim,Toprim_Crpt PHJFGMMN_00275 667015.Bacsa_2531 0.0 875.0 2CI0Q@1|root,2Z86V@2|Bacteria,4NEAY@976|Bacteroidetes,2FN31@200643|Bacteroidia,4AK8X@815|Bacteroidaceae 976|Bacteroidetes S COG NOG09947 non supervised orthologous group - - - - - - - - - - - - DUF3945,DUF4099 PHJFGMMN_00276 762982.HMPREF9442_00400 3.09e-65 199.0 2D42G@1|root,2ZBPH@2|Bacteria,4NMK5@976|Bacteroidetes,2FS2Y@200643|Bacteroidia 976|Bacteroidetes S the current gene model (or a revised gene model) may contain a frame shift - - - - - - - - - - - - HTH_17 PHJFGMMN_00277 1121101.HMPREF1532_04152 6.61e-71 214.0 28TJB@1|root,2ZFT4@2|Bacteria,4NNB1@976|Bacteroidetes,2FSHN@200643|Bacteroidia,4AR8A@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - HTH_17 PHJFGMMN_00278 1002367.HMPREF0673_00064 2.64e-53 167.0 2DHWM@1|root,30173@2|Bacteria,4NPMY@976|Bacteroidetes,2FSIB@200643|Bacteroidia 976|Bacteroidetes S Helix-turn-helix domain - - - - - - - - - - - - HTH_17 PHJFGMMN_00279 1077285.AGDG01000032_gene4283 2.64e-65 199.0 2BQ1B@1|root,32IVM@2|Bacteria,4NQZI@976|Bacteroidetes,2FSKW@200643|Bacteroidia,4AR3Z@815|Bacteroidaceae 976|Bacteroidetes S DNA binding domain, excisionase family - - - - - - - - - - - - HTH_17 PHJFGMMN_00280 1002367.HMPREF0673_00062 5.4e-80 237.0 COG3943@1|root,COG3943@2|Bacteria,4NN51@976|Bacteroidetes,2G386@200643|Bacteroidia 976|Bacteroidetes S COG3943, virulence protein - - - - - - - - - - - - - PHJFGMMN_00281 626522.GCWU000325_02027 9.45e-297 812.0 COG0582@1|root,COG0582@2|Bacteria,4NDZJ@976|Bacteroidetes,2FM4Q@200643|Bacteroidia,1WDQ2@1283313|Alloprevotella 976|Bacteroidetes L Phage integrase SAM-like domain - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_00283 411477.PARMER_03414 0.0 966.0 COG2195@1|root,COG2195@2|Bacteria,4NG8I@976|Bacteroidetes,2FM0V@200643|Bacteroidia,22WW0@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the hydrolysis of Xaa-His dipeptides - - - ko:K01270 ko00480,ko01100,map00480,map01100 - R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 - - - M20_dimer,Peptidase_M20,Peptidase_M28 PHJFGMMN_00284 411477.PARMER_03415 3.34e-243 668.0 COG0392@1|root,COG0392@2|Bacteria,4NGPD@976|Bacteroidetes,2FP5P@200643|Bacteroidia,22WY0@171551|Porphyromonadaceae 976|Bacteroidetes S Lysylphosphatidylglycerol synthase TM region - - - ko:K07027 - - - - ko00000,ko02000 4.D.2 - - LPG_synthase_TM PHJFGMMN_00285 411477.PARMER_03416 1.36e-211 584.0 COG0030@1|root,COG0030@2|Bacteria,4NERB@976|Bacteroidetes,2FMH1@200643|Bacteroidia,22WN1@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits ksgA GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 ko:K02528 - - R10716 RC00003,RC03257 ko00000,ko01000,ko03009 - - - RrnaAD PHJFGMMN_00286 411477.PARMER_03417 4.6e-244 679.0 COG2239@1|root,COG2239@2|Bacteria,4NGGN@976|Bacteroidetes,2FN1M@200643|Bacteroidia,22WIG@171551|Porphyromonadaceae 976|Bacteroidetes P Acts as a magnesium transporter mgtE - - ko:K06213 - - - - ko00000,ko02000 1.A.26.1 - - CBS,MgtE,MgtE_N PHJFGMMN_00287 411477.PARMER_03418 0.0 1152.0 COG0614@1|root,COG0614@2|Bacteria,4PKT3@976|Bacteroidetes,2G0HG@200643|Bacteroidia 976|Bacteroidetes P SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_00288 1122931.AUAE01000005_gene3532 0.0 1608.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,23234@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_00289 411477.PARMER_03421 6.2e-285 778.0 COG3712@1|root,COG3712@2|Bacteria,4NE6N@976|Bacteroidetes,2FQ9J@200643|Bacteroidia,22Y6U@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_00290 411477.PARMER_03422 2.45e-122 350.0 COG1595@1|root,COG1595@2|Bacteria,4NQJ8@976|Bacteroidetes,2FSSP@200643|Bacteroidia,231PN@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_00293 411477.PARMER_03425 5.44e-60 186.0 COG1380@1|root,COG1380@2|Bacteria,4NSK7@976|Bacteroidetes,2FU8X@200643|Bacteroidia,22YED@171551|Porphyromonadaceae 976|Bacteroidetes S Murein hydrolase - - - ko:K06518 - - - - ko00000,ko02000 1.E.14.2 - - LrgA PHJFGMMN_00294 411477.PARMER_03426 7.2e-144 408.0 COG1346@1|root,COG1346@2|Bacteria,4NM6T@976|Bacteroidetes,2FMZ5@200643|Bacteroidia,22X7K@171551|Porphyromonadaceae 976|Bacteroidetes M TIGR00659 family lrgB - - - - - - - - - - - LrgB PHJFGMMN_00295 411477.PARMER_03427 5.82e-130 369.0 COG0231@1|root,COG0231@2|Bacteria,4NDXA@976|Bacteroidetes,2FP84@200643|Bacteroidia,22VYU@171551|Porphyromonadaceae 976|Bacteroidetes J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase efp GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - ko:K02356 - - - - ko00000,ko03012 - - - EFP,EFP_N,Elong-fact-P_C PHJFGMMN_00296 411477.PARMER_03428 6.85e-155 435.0 COG2003@1|root,COG2003@2|Bacteria,4NFBF@976|Bacteroidetes,2FNF3@200643|Bacteroidia,22XMK@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the UPF0758 family radC - - ko:K03630 - - - - ko00000 - - - RadC PHJFGMMN_00297 411477.PARMER_03429 1.72e-69 209.0 COG2151@1|root,COG2151@2|Bacteria,4NSA9@976|Bacteroidetes,2FT2N@200643|Bacteroidia,22Y47@171551|Porphyromonadaceae 976|Bacteroidetes S FeS assembly SUF system protein yitW - - - - - - - - - - - FeS_assembly_P PHJFGMMN_00298 411477.PARMER_03430 9.51e-196 541.0 COG2908@1|root,COG2908@2|Bacteria,4NEF1@976|Bacteroidetes,2FM2C@200643|Bacteroidia,22W7E@171551|Porphyromonadaceae 976|Bacteroidetes S UDP-2,3-diacylglucosamine hydrolase lpxH - 3.6.1.54 ko:K03269 ko00540,ko01100,map00540,map01100 M00060 R04549 RC00002 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Metallophos,Metallophos_2 PHJFGMMN_00300 411477.PARMER_03432 1.01e-293 801.0 COG0282@1|root,COG0282@2|Bacteria,4NFI0@976|Bacteroidetes,2FN9W@200643|Bacteroidia,22WNE@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction ackA - 2.7.2.1 ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 M00357,M00579 R00315,R01353 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - Acetate_kinase PHJFGMMN_00301 411477.PARMER_03433 2.05e-232 640.0 COG0280@1|root,COG0280@2|Bacteria,4NGX5@976|Bacteroidetes,2FMKY@200643|Bacteroidia,22X9D@171551|Porphyromonadaceae 976|Bacteroidetes C Phosphotransacetylase pta - 2.3.1.8 ko:K00625,ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 M00357,M00579 R00230,R00921 RC00004,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000 - - - AAA_26,DRTGG,PTA_PTB PHJFGMMN_00302 411477.PARMER_03434 1.28e-181 506.0 COG1624@1|root,COG1624@2|Bacteria,4NG3Z@976|Bacteroidetes,2FN6K@200643|Bacteroidia,22WS7@171551|Porphyromonadaceae 976|Bacteroidetes S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria dacA - - - - - - - - - - - DisA_N PHJFGMMN_00303 411477.PARMER_03435 4.19e-204 565.0 COG0294@1|root,COG0294@2|Bacteria,4NEYJ@976|Bacteroidetes,2FN1T@200643|Bacteroidia,22W9X@171551|Porphyromonadaceae 976|Bacteroidetes H dihydropteroate synthase folP - 2.5.1.15 ko:K00796 ko00790,ko01100,map00790,map01100 M00126,M00841 R03066,R03067 RC00121,RC00842 ko00000,ko00001,ko00002,ko01000 - - - Pterin_bind PHJFGMMN_00304 411477.PARMER_03436 0.0 863.0 COG0770@1|root,COG0770@2|Bacteria,4NDWD@976|Bacteroidetes,2FN92@200643|Bacteroidia,22WG2@171551|Porphyromonadaceae 976|Bacteroidetes M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein murF - 6.3.2.10 ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 - R04573,R04617 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M PHJFGMMN_00306 411477.PARMER_03440 0.0 889.0 COG1073@1|root,COG1073@2|Bacteria,4NG6A@976|Bacteroidetes,2FPAE@200643|Bacteroidia,22YCE@171551|Porphyromonadaceae 976|Bacteroidetes S alpha beta - - - - - - - - - - - - - PHJFGMMN_00307 411477.PARMER_03441 0.0 1285.0 2DBFZ@1|root,2Z91A@2|Bacteria,4PKZZ@976|Bacteroidetes,2G09H@200643|Bacteroidia,2324A@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_00308 411477.PARMER_03442 0.0 2279.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22ZBI@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_00309 411477.PARMER_01088 2.52e-226 625.0 COG3712@1|root,COG3712@2|Bacteria,4NKNV@976|Bacteroidetes,2FQUH@200643|Bacteroidia 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_00310 411477.PARMER_01089 2.44e-123 352.0 COG1595@1|root,COG1595@2|Bacteria,4NQ0Z@976|Bacteroidetes,2FSHB@200643|Bacteroidia,22YU2@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_00311 411477.PARMER_01090 9.65e-218 600.0 COG0524@1|root,COG0524@2|Bacteria,4NFJ9@976|Bacteroidetes,2FM38@200643|Bacteroidia,22WX0@171551|Porphyromonadaceae 976|Bacteroidetes G pfkB family carbohydrate kinase - - - - - - - - - - - - PfkB PHJFGMMN_00312 411477.PARMER_01091 2.45e-287 785.0 COG0738@1|root,COG0738@2|Bacteria,4NEYR@976|Bacteroidetes,2FP5F@200643|Bacteroidia,22W0X@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator Superfamily fucP - - ko:K02429 - - - - ko00000,ko02000 2.A.1.7 - - MFS_1 PHJFGMMN_00313 999419.HMPREF1077_01894 0.0 2145.0 COG0642@1|root,COG2205@2|Bacteria,4NKBC@976|Bacteroidetes,2FNE0@200643|Bacteroidia,22WMG@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c,HisKA,PAS_3,PAS_4 PHJFGMMN_00315 411477.PARMER_00042 2.63e-287 783.0 COG3274@1|root,COG3274@2|Bacteria,4NP3U@976|Bacteroidetes,2FN6D@200643|Bacteroidia,22XW5@171551|Porphyromonadaceae 976|Bacteroidetes S Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 PHJFGMMN_00316 411477.PARMER_00045 3.4e-296 808.0 COG4974@1|root,COG4974@2|Bacteria,4NFDF@976|Bacteroidetes,2G0BA@200643|Bacteroidia 976|Bacteroidetes L Arm DNA-binding domain - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_00317 411477.PARMER_00046 3.79e-272 744.0 COG4804@1|root,COG4804@2|Bacteria,4NGY8@976|Bacteroidetes,2FNJG@200643|Bacteroidia,22WM0@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1016) - - - - - - - - - - - - DUF1016 PHJFGMMN_00318 411477.PARMER_00048 2.93e-210 581.0 COG2207@1|root,COG2207@2|Bacteria,4NGZW@976|Bacteroidetes,2FP2W@200643|Bacteroidia 976|Bacteroidetes K transcriptional regulator (AraC family) - - - - - - - - - - - - AraC_binding,HTH_18 PHJFGMMN_00319 411477.PARMER_00049 1.75e-166 468.0 COG1028@1|root,COG1028@2|Bacteria,4NGQY@976|Bacteroidetes,2G2N2@200643|Bacteroidia,231G4@171551|Porphyromonadaceae 976|Bacteroidetes IQ COG COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - 1.1.1.30 ko:K00019 ko00072,ko00650,ko01100,map00072,map00650,map01100 M00088 R01361 RC00117 ko00000,ko00001,ko00002,ko01000 - - - adh_short,adh_short_C2 PHJFGMMN_00320 411477.PARMER_00050 3.41e-198 551.0 COG1028@1|root,COG1028@2|Bacteria,4NGQY@976|Bacteroidetes,2G2N2@200643|Bacteroidia,231G4@171551|Porphyromonadaceae 976|Bacteroidetes IQ COG COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - 1.1.1.30 ko:K00019 ko00072,ko00650,ko01100,map00072,map00650,map01100 M00088 R01361 RC00117 ko00000,ko00001,ko00002,ko01000 - - - adh_short,adh_short_C2 PHJFGMMN_00321 411477.PARMER_00051 2.34e-113 325.0 COG2259@1|root,COG2259@2|Bacteria 2|Bacteria S methylamine metabolic process - - - ko:K15977 - - - - ko00000 - - - DoxX PHJFGMMN_00322 411477.PARMER_00052 8.99e-226 622.0 COG0697@1|root,COG0697@2|Bacteria,4NGZ3@976|Bacteroidetes,2FP7S@200643|Bacteroidia,22XCP@171551|Porphyromonadaceae 976|Bacteroidetes EG membrane - - - - - - - - - - - - EamA PHJFGMMN_00323 411477.PARMER_00053 3.12e-162 455.0 2DBFI@1|root,2Z8YS@2|Bacteria,4NHQD@976|Bacteroidetes,2FPG2@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_00324 411477.PARMER_00054 7.82e-210 581.0 COG3843@1|root,COG3843@2|Bacteria,4NH77@976|Bacteroidetes,2FM27@200643|Bacteroidia,22XK0@171551|Porphyromonadaceae 976|Bacteroidetes U Mobilization protein - - - - - - - - - - - - Relaxase PHJFGMMN_00325 411477.PARMER_00055 7.76e-81 240.0 2E51N@1|root,32ZV1@2|Bacteria,4NW1B@976|Bacteroidetes,2FS01@200643|Bacteroidia,22YQ6@171551|Porphyromonadaceae 976|Bacteroidetes S Bacterial mobilisation protein (MobC) - - - - - - - - - - - - MobC PHJFGMMN_00326 411477.PARMER_00056 2.53e-243 667.0 COG0358@1|root,COG0358@2|Bacteria,4NH5X@976|Bacteroidetes,2FPHT@200643|Bacteroidia,22XAP@171551|Porphyromonadaceae 976|Bacteroidetes L DNA primase - - - - - - - - - - - - Toprim_2,zf-CHC2 PHJFGMMN_00327 411477.PARMER_00057 3.29e-260 712.0 COG0467@1|root,COG0467@2|Bacteria,4NIAQ@976|Bacteroidetes,2FMJT@200643|Bacteroidia,22X4M@171551|Porphyromonadaceae 976|Bacteroidetes T AAA domain - - - - - - - - - - - - AAA_25 PHJFGMMN_00328 1235813.JCM10003_333 5.64e-59 182.0 COG3311@1|root,COG3311@2|Bacteria,4NSAH@976|Bacteroidetes,2FT2T@200643|Bacteroidia,4ARMX@815|Bacteroidaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_17 PHJFGMMN_00329 411477.PARMER_00059 1.08e-214 593.0 2BBUC@1|root,325CN@2|Bacteria,4NQVH@976|Bacteroidetes,2FMJQ@200643|Bacteroidia,22Z0E@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00331 411477.PARMER_00063 2.21e-254 698.0 COG0836@1|root,COG0836@2|Bacteria,4NE1Y@976|Bacteroidetes,2FNHF@200643|Bacteroidia,22X4P@171551|Porphyromonadaceae 976|Bacteroidetes M mannose-1-phosphate guanylyltransferase manC - 2.7.7.13 ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 M00114,M00361,M00362 R00885 RC00002 ko00000,ko00001,ko00002,ko01000 - - - NTP_transferase PHJFGMMN_00332 411477.PARMER_00065 2.75e-244 670.0 COG2755@1|root,COG2755@2|Bacteria,4NFN6@976|Bacteroidetes,2FKZ2@200643|Bacteroidia,22W3N@171551|Porphyromonadaceae 976|Bacteroidetes E GSCFA family - - - - - - - - - - - - GSCFA PHJFGMMN_00333 411477.PARMER_00066 0.0 1626.0 COG0770@1|root,COG0787@1|root,COG0770@2|Bacteria,COG0787@2|Bacteria,4NEXM@976|Bacteroidetes,2FMM3@200643|Bacteroidia,22WCC@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids alr - 5.1.1.1,6.3.2.10 ko:K01775,ko:K01929 ko00300,ko00473,ko00550,ko01100,ko01502,map00300,map00473,map00550,map01100,map01502 - R00401,R04573,R04617 RC00064,RC00141,RC00285 ko00000,ko00001,ko01000,ko01011 - - - Ala_racemase_C,Ala_racemase_N,Mur_ligase,Mur_ligase_M PHJFGMMN_00334 411477.PARMER_00067 1.84e-202 560.0 COG0623@1|root,COG0623@2|Bacteria,4NEVE@976|Bacteroidetes,2FM85@200643|Bacteroidia,22W1Y@171551|Porphyromonadaceae 976|Bacteroidetes I Enoyl- acyl-carrier-protein reductase NADH fabI - 1.3.1.10,1.3.1.9 ko:K00208 ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212 M00083,M00572 R01404,R04429,R04430,R04724,R04725,R04955,R04956,R04958,R04959,R04961,R04962,R04966,R04967,R04969,R04970,R07765,R10118,R10122,R11671 RC00052,RC00076,RC00120 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short_C2 PHJFGMMN_00335 411477.PARMER_00068 6.98e-143 403.0 COG0009@1|root,COG0009@2|Bacteria,4NDZR@976|Bacteroidetes,2FP9A@200643|Bacteroidia,22XEI@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the SUA5 family yciO - - - - - - - - - - - Sua5_yciO_yrdC PHJFGMMN_00336 411477.PARMER_00069 0.0 892.0 COG0232@1|root,COG0232@2|Bacteria,4NENM@976|Bacteroidetes,2FP36@200643|Bacteroidia,22X6H@171551|Porphyromonadaceae 976|Bacteroidetes F Dehydrogenase dgt - 3.1.5.1 ko:K01129 ko00230,map00230 - R01856 RC00017 ko00000,ko00001,ko01000 - - - HD,HD_assoc PHJFGMMN_00337 411477.PARMER_00070 1.37e-225 622.0 COG1162@1|root,COG1162@2|Bacteria,4NE5H@976|Bacteroidetes,2FNY9@200643|Bacteroidia,22WRP@171551|Porphyromonadaceae 976|Bacteroidetes S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit rsgA - 3.1.3.100 ko:K06949 ko00730,ko01100,map00730,map01100 - R00615,R02135 RC00002,RC00017 ko00000,ko00001,ko01000,ko03009 - - - RsgA_GTPase,RsgA_N PHJFGMMN_00338 411477.PARMER_00071 2.45e-122 350.0 COG0233@1|root,COG0233@2|Bacteria,4NF95@976|Bacteroidetes,2FPZE@200643|Bacteroidia,22XNM@171551|Porphyromonadaceae 976|Bacteroidetes J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another frr GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - ko:K02838 - - - - ko00000,ko03012 - - - RRF PHJFGMMN_00339 411477.PARMER_00072 2.62e-262 720.0 COG0738@1|root,COG0738@2|Bacteria,4NEB2@976|Bacteroidetes,2FMUT@200643|Bacteroidia,22VVA@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator - - - - - - - - - - - - MFS_1 PHJFGMMN_00340 411477.PARMER_00073 7.51e-203 561.0 COG0524@1|root,COG0524@2|Bacteria,4NGFK@976|Bacteroidetes,2FN72@200643|Bacteroidia,22WT2@171551|Porphyromonadaceae 976|Bacteroidetes G pfkB family - - 2.7.1.4 ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 - R00760,R00867,R03920 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PfkB PHJFGMMN_00341 411477.PARMER_00074 0.0 1149.0 COG1621@1|root,COG1621@2|Bacteria,4NEYI@976|Bacteroidetes,2FM1Y@200643|Bacteroidia,22ZM7@171551|Porphyromonadaceae 976|Bacteroidetes G Psort location Cytoplasmic, score - - 3.2.1.80 ko:K03332 ko00051,map00051 - R00879 - ko00000,ko00001,ko01000 - - - DUF4980,Glyco_hydro_32C,Glyco_hydro_32N PHJFGMMN_00342 411477.PARMER_00075 3.01e-163 457.0 COG0528@1|root,COG0528@2|Bacteria,4NE8Z@976|Bacteroidetes,2FMES@200643|Bacteroidia,22WRK@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the reversible phosphorylation of UMP to UDP pyrH - 2.7.4.22 ko:K09903 ko00240,ko01100,map00240,map01100 - R00158 RC00002 ko00000,ko00001,ko01000 - - - AA_kinase PHJFGMMN_00343 999419.HMPREF1077_01849 5.6e-45 145.0 2CM2G@1|root,33MNS@2|Bacteria,4NXT7@976|Bacteroidetes,2FVIX@200643|Bacteroidia,2318R@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00344 411477.PARMER_00078 0.0 1855.0 COG0178@1|root,COG0178@2|Bacteria,4NEHM@976|Bacteroidetes,2FNFZ@200643|Bacteroidia,22X2V@171551|Porphyromonadaceae 976|Bacteroidetes L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate uvrA1 - - ko:K03701 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - AAA_21,ABC_tran PHJFGMMN_00345 411477.PARMER_00080 0.0 2200.0 COG3250@1|root,COG3250@2|Bacteria,4NFE8@976|Bacteroidetes,2FPEC@200643|Bacteroidia,22WHR@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 2, sugar binding domain protein - - - - - - - - - - - - Glyco_hydro_106,Glyco_hydro_2_N PHJFGMMN_00346 411477.PARMER_00081 0.0 1063.0 COG1649@1|root,COG1649@2|Bacteria,4NFKQ@976|Bacteroidetes,2FMPU@200643|Bacteroidia,22W1J@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl hydrolase-like 10 - - - - - - - - - - - - GHL10 PHJFGMMN_00347 999419.HMPREF1077_01845 8.15e-205 566.0 COG2207@1|root,COG2207@2|Bacteria,4P2DJ@976|Bacteroidetes,2FNWY@200643|Bacteroidia 976|Bacteroidetes K transcriptional regulator (AraC family) - - - - - - - - - - - - HTH_18 PHJFGMMN_00348 411477.PARMER_00083 2.69e-279 762.0 COG2931@1|root,COG2931@2|Bacteria,4NNN8@976|Bacteroidetes,2FNV2@200643|Bacteroidia,22Y2T@171551|Porphyromonadaceae 976|Bacteroidetes Q Clostripain family - - - - - - - - - - - - Peptidase_C11 PHJFGMMN_00349 411477.PARMER_00084 0.0 1533.0 COG4288@1|root,COG4288@2|Bacteria,4NHM6@976|Bacteroidetes,2FQBP@200643|Bacteroidia,22Y8Y@171551|Porphyromonadaceae 976|Bacteroidetes S Lamin Tail Domain - - - - - - - - - - - - Big_5,CHU_C,LTD PHJFGMMN_00350 411477.PARMER_00085 5.52e-241 662.0 COG0136@1|root,COG0136@2|Bacteria,4NE4V@976|Bacteroidetes,2FMHI@200643|Bacteroidia,22VZA@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate asd - 1.2.1.11 ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R02291 RC00684 ko00000,ko00001,ko00002,ko01000 - - - Semialdhyde_dh,Semialdhyde_dhC PHJFGMMN_00351 411477.PARMER_00086 4.43e-220 606.0 COG1091@1|root,COG1091@2|Bacteria,4NE3K@976|Bacteroidetes,2FN7H@200643|Bacteroidia,22WWK@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose rfbD - 1.1.1.133 ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R02777 RC00182 ko00000,ko00001,ko00002,ko01000 - - - RmlD_sub_bind PHJFGMMN_00352 411477.PARMER_00087 1.92e-306 833.0 292UM@1|root,2ZQC9@2|Bacteria,4NTGF@976|Bacteroidetes,2FMY7@200643|Bacteroidia,22WZB@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00353 411477.PARMER_00090 0.0 908.0 COG1350@1|root,COG1350@2|Bacteria,4PKSY@976|Bacteroidetes,2FMFD@200643|Bacteroidia,22WD1@171551|Porphyromonadaceae 976|Bacteroidetes E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine trpB - 4.2.1.20 ko:K06001 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 - - - PALP PHJFGMMN_00354 411477.PARMER_00091 1.35e-92 270.0 2C25A@1|root,33QA9@2|Bacteria,4P120@976|Bacteroidetes,2FVCY@200643|Bacteroidia,2311F@171551|Porphyromonadaceae 976|Bacteroidetes S Family of unknown function (DUF3836) - - - - - - - - - - - - DUF3836 PHJFGMMN_00355 411477.PARMER_00093 2.28e-40 133.0 COG3655@1|root,COG3655@2|Bacteria,4NUP7@976|Bacteroidetes,2FTVE@200643|Bacteroidia,22YVT@171551|Porphyromonadaceae 976|Bacteroidetes K Cro/C1-type HTH DNA-binding domain - - - ko:K07727 - - - - ko00000,ko03000 - - - HTH_26 PHJFGMMN_00357 411477.PARMER_00095 4.67e-155 435.0 2EQ0K@1|root,33HM1@2|Bacteria,4NXUB@976|Bacteroidetes,2FRV2@200643|Bacteroidia,22YWG@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF2975) - - - - - - - - - - - - DUF2975 PHJFGMMN_00358 411477.PARMER_00097 0.0 1135.0 COG0616@1|root,COG0616@2|Bacteria,4NES1@976|Bacteroidetes,2FMR0@200643|Bacteroidia,22WA3@171551|Porphyromonadaceae 976|Bacteroidetes OU signal peptide peptidase SppA, 67K type sppA - - ko:K04773 - - - - ko00000,ko01000,ko01002 - - - Peptidase_S49 PHJFGMMN_00359 411477.PARMER_00098 3.72e-167 466.0 COG5587@1|root,COG5587@2|Bacteria,4NNS3@976|Bacteroidetes,2FPZZ@200643|Bacteroidia,22XWU@171551|Porphyromonadaceae 976|Bacteroidetes S Conserved hypothetical protein (DUF2461) - - - - - - - - - - - - DUF2461 PHJFGMMN_00360 411477.PARMER_00099 0.0 1467.0 COG0729@1|root,COG1752@1|root,COG0729@2|Bacteria,COG1752@2|Bacteria,4NDXY@976|Bacteroidetes,2FNEV@200643|Bacteroidia,22WBN@171551|Porphyromonadaceae 976|Bacteroidetes M esterase of the alpha-beta hydrolase superfamily - - - ko:K07001 - - - - ko00000 - - - POTRA,Patatin PHJFGMMN_00361 411477.PARMER_00100 3.92e-137 387.0 2928B@1|root,2ZPSY@2|Bacteria,4P6WQ@976|Bacteroidetes,2FVMP@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00362 411477.PARMER_00101 4.66e-300 817.0 COG3391@1|root,COG3391@2|Bacteria,4P4QQ@976|Bacteroidetes,2FVGV@200643|Bacteroidia 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 PHJFGMMN_00363 999419.HMPREF1077_01817 0.0 884.0 COG0457@1|root,COG0457@2|Bacteria,4NVW0@976|Bacteroidetes,2FNSS@200643|Bacteroidia,22YH2@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeats - - - - - - - - - - - - TPR_16,TPR_19,TPR_6,TPR_8 PHJFGMMN_00364 411477.PARMER_00103 0.0 1129.0 COG0810@1|root,COG4219@1|root,COG0810@2|Bacteria,COG4219@2|Bacteria,4NDWS@976|Bacteroidetes,2FNCU@200643|Bacteroidia,22X60@171551|Porphyromonadaceae 976|Bacteroidetes KMT Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - - - - - - - - - - CarbopepD_reg_2,Peptidase_M56,Plug,TonB_C PHJFGMMN_00365 411477.PARMER_00104 1.13e-81 241.0 COG3682@1|root,COG3682@2|Bacteria,4NT4V@976|Bacteroidetes,2FSGP@200643|Bacteroidia,22Y4H@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator - - - - - - - - - - - - Penicillinase_R PHJFGMMN_00366 411477.PARMER_00105 8.42e-215 592.0 COG0584@1|root,COG0584@2|Bacteria,4NE2E@976|Bacteroidetes,2FPII@200643|Bacteroidia,231I3@171551|Porphyromonadaceae 976|Bacteroidetes C Glycerophosphoryl diester phosphodiesterase family - - 3.1.4.46 ko:K01126 ko00564,map00564 - R01030,R01470 RC00017,RC00425 ko00000,ko00001,ko01000 - - - DUF4996,GDPD PHJFGMMN_00367 411477.PARMER_00106 2.65e-268 734.0 COG0758@1|root,COG0758@2|Bacteria,4NF7T@976|Bacteroidetes,2FKYE@200643|Bacteroidia,22WZ4@171551|Porphyromonadaceae 976|Bacteroidetes LU DNA protecting protein DprA dprA - - ko:K04096 - - - - ko00000 - - - DNA_processg_A,HHH_5 PHJFGMMN_00368 411477.PARMER_00107 1.31e-94 275.0 COG0824@1|root,COG0824@2|Bacteria,4NSJR@976|Bacteroidetes,2FS2E@200643|Bacteroidia,22Y6W@171551|Porphyromonadaceae 976|Bacteroidetes S acyl-CoA thioester hydrolase, YbgC YbaW family - - - ko:K07107 - - - - ko00000,ko01000 - - - 4HBT,4HBT_2 PHJFGMMN_00369 411477.PARMER_00108 2.71e-300 819.0 COG0826@1|root,COG0826@2|Bacteria,4NERN@976|Bacteroidetes,2FN1E@200643|Bacteroidia,22VVZ@171551|Porphyromonadaceae 976|Bacteroidetes O collagenase prtC - - ko:K08303 ko05120,map05120 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_U32 PHJFGMMN_00370 411477.PARMER_00109 1.75e-298 813.0 COG3391@1|root,COG3391@2|Bacteria,4PJGU@976|Bacteroidetes,2FSQW@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4934) - - - - - - - - - - - - DUF5128 PHJFGMMN_00371 411477.PARMER_00110 3.28e-296 808.0 COG0457@1|root,COG0457@2|Bacteria,4PI8M@976|Bacteroidetes,2G1ER@200643|Bacteroidia,231B4@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_19 PHJFGMMN_00372 411477.PARMER_00111 2.93e-217 602.0 COG4219@1|root,COG4219@2|Bacteria 2|Bacteria - - blaR1 - - - - - - - - - - - Peptidase_M56,TonB_C PHJFGMMN_00373 411477.PARMER_00112 2.73e-153 430.0 COG4219@1|root,COG4219@2|Bacteria,4NDWS@976|Bacteroidetes,2FNCU@200643|Bacteroidia 976|Bacteroidetes KT Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - - - - - - - - - - CarbopepD_reg_2,Peptidase_M56,Plug,TonB_C PHJFGMMN_00374 411477.PARMER_00113 6.58e-78 233.0 COG3682@1|root,COG3682@2|Bacteria,4NT4V@976|Bacteroidetes,2FSM6@200643|Bacteroidia,22YE4@171551|Porphyromonadaceae 976|Bacteroidetes K Penicillinase repressor - - - - - - - - - - - - Penicillinase_R PHJFGMMN_00375 411477.PARMER_00114 8.28e-251 687.0 COG0042@1|root,COG0042@2|Bacteria,4NEN4@976|Bacteroidetes,2FM9Z@200643|Bacteroidia,22WST@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines dus - - - - - - - - - - - Dus PHJFGMMN_00378 411477.PARMER_00116 1.45e-182 507.0 COG0479@1|root,COG0479@2|Bacteria,4NFR3@976|Bacteroidetes,2FP6Q@200643|Bacteroidia,22W4E@171551|Porphyromonadaceae 976|Bacteroidetes C succinate dehydrogenase frdB - 1.3.5.1,1.3.5.4 ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 - - - Fer2_3,Fer4_7,Fer4_8 PHJFGMMN_00379 411477.PARMER_00117 0.0 1305.0 COG1053@1|root,COG1053@2|Bacteria,4NFDU@976|Bacteroidetes,2FM67@200643|Bacteroidia,22WBE@171551|Porphyromonadaceae 976|Bacteroidetes C SdhA B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC D which are the membrane components and form cytochrome b556 sdhA - 1.3.5.1,1.3.5.4 ko:K00239 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 - - - FAD_binding_2,Succ_DH_flav_C PHJFGMMN_00380 411477.PARMER_00118 2.82e-162 454.0 2CAZH@1|root,2Z7RU@2|Bacteria,4NGM5@976|Bacteroidetes,2FM2S@200643|Bacteroidia,22WYG@171551|Porphyromonadaceae 976|Bacteroidetes S fumarate reductase sdhC - - ko:K00241 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002 - - - Sdh_cyt PHJFGMMN_00381 411477.PARMER_00120 3.74e-243 666.0 COG3828@1|root,COG3828@2|Bacteria,4NEWH@976|Bacteroidetes,2FQY6@200643|Bacteroidia,2305F@171551|Porphyromonadaceae 976|Bacteroidetes S Methane oxygenase PmoA - - - - - - - - - - - - PmoA PHJFGMMN_00382 411477.PARMER_00125 0.0 2203.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,22VWX@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_00383 411477.PARMER_00126 0.0 1255.0 COG0457@1|root,COG0457@2|Bacteria,4NDX0@976|Bacteroidetes,2FM6J@200643|Bacteroidia,22Z73@171551|Porphyromonadaceae 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_00384 411477.PARMER_00127 0.0 1160.0 28KYZ@1|root,2ZAEB@2|Bacteria,4NHBZ@976|Bacteroidetes,2FP4X@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - PHJFGMMN_00385 411477.PARMER_00128 0.0 993.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 PHJFGMMN_00386 411477.PARMER_00129 0.0 1433.0 COG3669@1|root,COG3669@2|Bacteria,4NEDX@976|Bacteroidetes,2FNFV@200643|Bacteroidia,22WIN@171551|Porphyromonadaceae 976|Bacteroidetes G F5 8 type C domain protein - - 3.2.1.51 ko:K01206 ko00511,map00511 - - - ko00000,ko00001,ko01000,ko04147 - GH29 - Alpha_L_fucos,CHB_HEX_C_1,F5_F8_type_C,Fn3_assoc PHJFGMMN_00388 411477.PARMER_00133 0.0 2141.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FWW6@200643|Bacteroidia 976|Bacteroidetes H TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_00389 411477.PARMER_00134 0.0 1123.0 COG1435@1|root,COG1435@2|Bacteria,4NE0S@976|Bacteroidetes,2FMZF@200643|Bacteroidia,22X0A@171551|Porphyromonadaceae 976|Bacteroidetes F Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_00390 411477.PARMER_00135 3.56e-160 448.0 2DC1C@1|root,2ZCDH@2|Bacteria,4NMEB@976|Bacteroidetes,2G2H6@200643|Bacteroidia 976|Bacteroidetes S Protein of unknown function (DUF3823) - - - - - - - - - - - - DUF3823 PHJFGMMN_00391 411477.PARMER_00136 0.0 1186.0 COG2755@1|root,COG4783@1|root,COG2755@2|Bacteria,COG4783@2|Bacteria,4NHX6@976|Bacteroidetes 976|Bacteroidetes E chaperone-mediated protein folding - - - - - - - - - - - - Lipase_GDSL_2 PHJFGMMN_00392 411477.PARMER_00137 0.0 1233.0 COG2192@1|root,COG2192@2|Bacteria,4NEV9@976|Bacteroidetes,2FR47@200643|Bacteroidia,230HH@171551|Porphyromonadaceae 976|Bacteroidetes O Carbamoyltransferase C-terminus - - - ko:K00612 - - - - ko00000,ko01000 - - - Carbam_trans_C,Carbam_trans_N PHJFGMMN_00394 1392490.JHZX01000001_gene1281 4.33e-06 48.5 2CH0Y@1|root,3309M@2|Bacteria,4NY17@976|Bacteroidetes,1I6TX@117743|Flavobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00395 411477.PARMER_00140 0.0 1140.0 28KYZ@1|root,2ZAEB@2|Bacteria,4NHBZ@976|Bacteroidetes 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - PHJFGMMN_00396 411477.PARMER_00141 0.0 1052.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 PHJFGMMN_00397 411477.PARMER_00142 3.78e-249 685.0 COG0845@1|root,COG0845@2|Bacteria,4NERP@976|Bacteroidetes,2FMFG@200643|Bacteroidia,22XHS@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - HlyD_D23 PHJFGMMN_00398 411477.PARMER_00143 0.0 1907.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FM3B@200643|Bacteroidia,22VY6@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family bepE_4 - - ko:K03296,ko:K18138 ko01501,ko01503,map01501,map01503 M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000 2.A.6.2 - - ACR_tran PHJFGMMN_00399 411477.PARMER_00144 1.61e-309 844.0 COG1538@1|root,COG1538@2|Bacteria,4NEMI@976|Bacteroidetes,2FMRJ@200643|Bacteroidia,22W2E@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein tolC - - - - - - - - - - - OEP PHJFGMMN_00400 411477.PARMER_00145 6.41e-192 532.0 COG4122@1|root,COG4122@2|Bacteria,4NG1S@976|Bacteroidetes,2FNB5@200643|Bacteroidia,22YQI@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score - - - - - - - - - - - - Methyltransf_24 PHJFGMMN_00401 411477.PARMER_00147 1.74e-131 373.0 COG2096@1|root,COG2096@2|Bacteria,4NFHQ@976|Bacteroidetes,2FQJ0@200643|Bacteroidia,22Y06@171551|Porphyromonadaceae 976|Bacteroidetes S adenosyltransferase yvqK - 2.5.1.17 ko:K00798 ko00860,ko01100,map00860,map01100 M00122 R01492,R05220,R07268 RC00533 ko00000,ko00001,ko00002,ko01000 - - - Cob_adeno_trans PHJFGMMN_00402 1122931.AUAE01000007_gene1294 1.61e-48 154.0 2C8VT@1|root,32RN1@2|Bacteria,4NS78@976|Bacteroidetes,2FTSK@200643|Bacteroidia,22YD9@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF2795) - - - - - - - - - - - - DUF2795 PHJFGMMN_00403 411477.PARMER_00149 1.23e-227 627.0 COG0226@1|root,COG0226@2|Bacteria,4PKGM@976|Bacteroidetes,2G3GH@200643|Bacteroidia,22XC5@171551|Porphyromonadaceae 976|Bacteroidetes P Type IX secretion system membrane protein PorP/SprF - - - - - - - - - - - - PorP_SprF PHJFGMMN_00404 411477.PARMER_00150 0.0 991.0 COG1262@1|root,COG1262@2|Bacteria,4NGY2@976|Bacteroidetes,2FPTN@200643|Bacteroidia,22W76@171551|Porphyromonadaceae 976|Bacteroidetes M gliding motility-associated lipoprotein GldK gldK - - - - - - - - - - - FGE-sulfatase PHJFGMMN_00405 411477.PARMER_00151 2.05e-192 540.0 28IG3@1|root,2Z8HM@2|Bacteria,4NFJR@976|Bacteroidetes,2FP1Z@200643|Bacteroidia,22WE3@171551|Porphyromonadaceae 976|Bacteroidetes S Gliding motility-associated protein, GldL gldL - - - - - - - - - - - - PHJFGMMN_00406 411477.PARMER_00152 0.0 1012.0 28HG4@1|root,2Z7S0@2|Bacteria,4NE3G@976|Bacteroidetes,2FNU8@200643|Bacteroidia,22WNG@171551|Porphyromonadaceae 976|Bacteroidetes S Gliding motility-associated protein GldM gldM - - - - - - - - - - - GldM_C,GldM_N PHJFGMMN_00407 411477.PARMER_00153 4.91e-244 672.0 28H74@1|root,2Z7JF@2|Bacteria,4NFR0@976|Bacteroidetes,2FQ0B@200643|Bacteroidia,22WJE@171551|Porphyromonadaceae 976|Bacteroidetes S Gliding motility-associated protein GldN gldN - - - - - - - - - - - - PHJFGMMN_00408 411477.PARMER_00154 0.0 1842.0 COG1305@1|root,COG1305@2|Bacteria,4NFR8@976|Bacteroidetes,2FPAP@200643|Bacteroidia,22W3W@171551|Porphyromonadaceae 976|Bacteroidetes E Transglutaminase-like superfamily - - - - - - - - - - - - Transglut_core PHJFGMMN_00409 411477.PARMER_00155 0.0 962.0 COG3263@1|root,COG3263@2|Bacteria,4NFNS@976|Bacteroidetes,2FMZZ@200643|Bacteroidia,22X6I@171551|Porphyromonadaceae 976|Bacteroidetes P Potassium cvrA - - ko:K11105 - - - - ko00000,ko02000 2.A.36.6 - - Na_H_Exchanger,TrkA_C PHJFGMMN_00410 411477.PARMER_00156 1.2e-157 441.0 COG0224@1|root,COG0224@2|Bacteria,4NM5H@976|Bacteroidetes,2FNPU@200643|Bacteroidia,22XN5@171551|Porphyromonadaceae 976|Bacteroidetes C WbqC-like protein - - - - - - - - - - - - WbqC PHJFGMMN_00411 411477.PARMER_00157 6.04e-218 600.0 COG0681@1|root,COG0681@2|Bacteria,4NQT3@976|Bacteroidetes,2FPB0@200643|Bacteroidia,22YM4@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the peptidase S26 family lepB_1 - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24 PHJFGMMN_00412 411477.PARMER_00158 0.0 975.0 COG0681@1|root,COG0681@2|Bacteria,4NFTP@976|Bacteroidetes,2FNMS@200643|Bacteroidia,22W4M@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the peptidase S26 family lepB - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24,Peptidase_S26 PHJFGMMN_00413 411477.PARMER_00159 1.4e-170 476.0 COG0289@1|root,COG0289@2|Bacteria,4NDX2@976|Bacteroidetes,2FNUW@200643|Bacteroidia,22VX2@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the DapB family dapB - 1.17.1.8 ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R04198,R04199 RC00478 ko00000,ko00001,ko00002,ko01000 - - - DapB_C,DapB_N PHJFGMMN_00414 411477.PARMER_00160 0.0 888.0 28HQ3@1|root,2Z7XW@2|Bacteria,4NF9H@976|Bacteroidetes,2FPMP@200643|Bacteroidia,22VUD@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF2851) - - - - - - - - - - - - DUF2851 PHJFGMMN_00415 411477.PARMER_00161 0.0 1266.0 COG4704@1|root,COG4704@2|Bacteria,4NGPF@976|Bacteroidetes,2FNAC@200643|Bacteroidia,22WR4@171551|Porphyromonadaceae 976|Bacteroidetes S Bacterial Ig-like domain - - - - - - - - - - - - Big_5,fn3_3 PHJFGMMN_00416 999419.HMPREF1077_01775 7.52e-207 572.0 2DBTB@1|root,2ZAWY@2|Bacteria,4NIYP@976|Bacteroidetes,2G3EG@200643|Bacteroidia,22YQA@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3108) - - - - - - - - - - - - DUF3108 PHJFGMMN_00417 411477.PARMER_00163 1.79e-244 672.0 COG4191@1|root,COG4191@2|Bacteria,4PKDB@976|Bacteroidetes 976|Bacteroidetes T Histidine kinase - - - - - - - - - - - - HATPase_c PHJFGMMN_00418 411477.PARMER_00165 0.0 897.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMRV@200643|Bacteroidia,22W60@171551|Porphyromonadaceae 976|Bacteroidetes T COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat PHJFGMMN_00419 411477.PARMER_00166 1.74e-125 357.0 COG1595@1|root,COG1595@2|Bacteria,4NSAX@976|Bacteroidetes,2FU6X@200643|Bacteroidia,22YGA@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_00420 411477.PARMER_00167 6.42e-237 651.0 COG3712@1|root,COG3712@2|Bacteria,4NPUZ@976|Bacteroidetes,2FQ9G@200643|Bacteroidia,22Y2J@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_00421 411477.PARMER_00168 0.0 2223.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_00422 411477.PARMER_00169 0.0 1149.0 COG1395@1|root,COG1395@2|Bacteria,4NEA1@976|Bacteroidetes,2FP97@200643|Bacteroidia 976|Bacteroidetes K SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_00423 411477.PARMER_00170 0.0 1759.0 COG1554@1|root,COG1554@2|Bacteria,4NEWW@976|Bacteroidetes,2FMF9@200643|Bacteroidia,22W4V@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 65, N-terminal domain - - 3.2.1.51 ko:K15923 ko00511,map00511 - - - ko00000,ko00001,ko01000 - GH95 - Glyco_hyd_65N_2 PHJFGMMN_00424 411477.PARMER_00171 0.0 976.0 COG3119@1|root,COG3119@2|Bacteria,4NE7S@976|Bacteroidetes,2FMTS@200643|Bacteroidia 976|Bacteroidetes P COG COG3119 Arylsulfatase A and related enzymes - - 3.1.6.6 ko:K01133 - - - - ko00000,ko01000 - - - DUF4976,Sulfatase PHJFGMMN_00425 411477.PARMER_00172 1.56e-257 705.0 COG0524@1|root,COG0524@2|Bacteria,4NFH8@976|Bacteroidetes,2FMY2@200643|Bacteroidia,22X9W@171551|Porphyromonadaceae 976|Bacteroidetes G pfkB family carbohydrate kinase - - 2.7.1.45 ko:K00874 ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200 M00061,M00308,M00631 R01541 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - PfkB PHJFGMMN_00426 411477.PARMER_00173 8.42e-163 455.0 COG0800@1|root,COG0800@2|Bacteria,4NEFY@976|Bacteroidetes,2FNWD@200643|Bacteroidia,22WNT@171551|Porphyromonadaceae 976|Bacteroidetes G KDPG and KHG aldolase eda - 4.1.2.14,4.1.3.42 ko:K01625 ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200 M00008,M00061,M00308,M00631 R00470,R05605 RC00307,RC00308,RC00435 ko00000,ko00001,ko00002,ko01000 - - - Aldolase PHJFGMMN_00427 411477.PARMER_00174 0.0 958.0 COG1904@1|root,COG1904@2|Bacteria,4NFHS@976|Bacteroidetes,2FMMW@200643|Bacteroidia,22WQJ@171551|Porphyromonadaceae 976|Bacteroidetes G Glucuronate isomerase uxaC - 5.3.1.12 ko:K01812 ko00040,ko01100,map00040,map01100 M00061,M00631 R01482,R01983 RC00376 ko00000,ko00001,ko00002,ko01000 - - - UxaC PHJFGMMN_00428 411477.PARMER_00175 0.0 2016.0 COG3064@1|root,COG3064@2|Bacteria,4PKSW@976|Bacteroidetes,2G3H6@200643|Bacteroidia,22W8J@171551|Porphyromonadaceae 976|Bacteroidetes M Membrane - - - - - - - - - - - - TPR_16,TPR_6,TPR_8 PHJFGMMN_00429 411477.PARMER_00176 4.39e-176 492.0 COG1108@1|root,COG1108@2|Bacteria,4NH3D@976|Bacteroidetes,2FNK0@200643|Bacteroidia,22W1V@171551|Porphyromonadaceae 976|Bacteroidetes P ABC 3 transport family protein znuB - - ko:K02075,ko:K09816 ko02010,map02010 M00242,M00244 - - ko00000,ko00001,ko00002,ko02000 3.A.1.15,3.A.1.15.3,3.A.1.15.5 - - ABC-3 PHJFGMMN_00430 411477.PARMER_00178 6.63e-95 276.0 2BXIZ@1|root,32R1E@2|Bacteria,4NR51@976|Bacteroidetes,2FS62@200643|Bacteroidia,22YG8@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_00431 411477.PARMER_00179 3.16e-298 813.0 COG0128@1|root,COG0128@2|Bacteria,4NE8T@976|Bacteroidetes,2FNY8@200643|Bacteroidia,22WBG@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate aroA - 2.5.1.19 ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03460 RC00350 ko00000,ko00001,ko00002,ko01000 - - - EPSP_synthase PHJFGMMN_00432 411477.PARMER_00180 3.07e-280 764.0 COG4225@1|root,COG4225@2|Bacteria,4NHK7@976|Bacteroidetes,2FPVZ@200643|Bacteroidia,22XE1@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl Hydrolase Family 88 - - - - - - - - - - - - Glyco_hydro_88 PHJFGMMN_00433 411477.PARMER_00181 0.0 1197.0 2DBK6@1|root,2Z9R7@2|Bacteria,4NIKZ@976|Bacteroidetes 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00434 411477.PARMER_00182 0.0 1087.0 COG0436@1|root,COG0436@2|Bacteria,4NEN3@976|Bacteroidetes,2FNFW@200643|Bacteroidia,22ZJV@171551|Porphyromonadaceae 976|Bacteroidetes E SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_00435 411477.PARMER_00183 0.0 2197.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM37@200643|Bacteroidia,22W2S@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent Receptor Plug Domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_00436 411477.PARMER_00184 1.46e-236 650.0 COG3712@1|root,COG3712@2|Bacteria,4NRDD@976|Bacteroidetes,2FTJU@200643|Bacteroidia 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_00437 411477.PARMER_00185 8.06e-123 350.0 COG1595@1|root,COG1595@2|Bacteria,4NTFR@976|Bacteroidetes,2FU9G@200643|Bacteroidia,230JX@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_00439 411477.PARMER_00189 0.0 961.0 COG0673@1|root,COG0673@2|Bacteria,4NIF1@976|Bacteroidetes,2FX47@200643|Bacteroidia 976|Bacteroidetes S Oxidoreductase family, C-terminal alpha/beta domain - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C PHJFGMMN_00440 411477.PARMER_00190 0.0 1169.0 COG0436@1|root,COG0436@2|Bacteria,4P1AF@976|Bacteroidetes,2FXBD@200643|Bacteroidia 976|Bacteroidetes E Pfam:SusD - - - - - - - - - - - - SusD-like_3,SusD_RagB PHJFGMMN_00441 411477.PARMER_00191 0.0 2163.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FW53@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_00442 411477.PARMER_00193 6.2e-240 659.0 COG3712@1|root,COG3712@2|Bacteria,4P1XI@976|Bacteroidetes,2G30F@200643|Bacteroidia,231UU@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_00443 411477.PARMER_00194 3.94e-122 349.0 COG1595@1|root,COG1595@2|Bacteria,4NUYD@976|Bacteroidetes,2FT6D@200643|Bacteroidia 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_00444 411477.PARMER_00195 8.67e-101 291.0 COG0735@1|root,COG0735@2|Bacteria,4NQND@976|Bacteroidetes,2FS2D@200643|Bacteroidia,22Y4N@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the Fur family - - - ko:K03711 - - - - ko00000,ko03000 - - - FUR PHJFGMMN_00445 411477.PARMER_00196 0.0 1237.0 COG2217@1|root,COG2217@2|Bacteria,4NERS@976|Bacteroidetes,2FP0P@200643|Bacteroidia,22WFG@171551|Porphyromonadaceae 976|Bacteroidetes P cadmium-exporting ATPase cadA - 3.6.3.3,3.6.3.5 ko:K01534 - - - - ko00000,ko01000 3.A.3.6 - - E1-E2_ATPase,Hydrolase PHJFGMMN_00446 411477.PARMER_00197 3.4e-262 715.0 COG1621@1|root,COG1621@2|Bacteria,4NG8H@976|Bacteroidetes,2FN43@200643|Bacteroidia,22ZAH@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 32 N-terminal domain - - - - - - - - - - - - Glyco_hydro_43 PHJFGMMN_00447 411477.PARMER_00198 7.26e-256 699.0 COG1621@1|root,COG1621@2|Bacteria,4NG8H@976|Bacteroidetes,2FN43@200643|Bacteroidia,22ZAH@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 32 N-terminal domain - - - - - - - - - - - - Glyco_hydro_43 PHJFGMMN_00448 411477.PARMER_00199 0.0 1181.0 COG0436@1|root,COG0436@2|Bacteria,4NEN3@976|Bacteroidetes,2FNFW@200643|Bacteroidia,230JY@171551|Porphyromonadaceae 976|Bacteroidetes E Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_00449 411477.PARMER_00200 0.0 2145.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia,2323P@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_00450 411477.PARMER_00201 1.58e-238 655.0 COG3712@1|root,COG3712@2|Bacteria,4P0CS@976|Bacteroidetes,2FQ0A@200643|Bacteroidia 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_00451 411477.PARMER_00202 4.03e-143 404.0 COG1595@1|root,COG1595@2|Bacteria,4NRYN@976|Bacteroidetes,2FR9G@200643|Bacteroidia,22YSN@171551|Porphyromonadaceae 976|Bacteroidetes K ECF sigma factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_00452 411477.PARMER_00203 5.84e-168 470.0 COG1409@1|root,COG1409@2|Bacteria,4NPFR@976|Bacteroidetes,2G2Q5@200643|Bacteroidia 976|Bacteroidetes S Calcineurin-like phosphoesterase superfamily domain - - - - - - - - - - - - Metallophos PHJFGMMN_00453 411477.PARMER_00205 1.57e-191 531.0 COG0613@1|root,COG0613@2|Bacteria,4PMUK@976|Bacteroidetes,2G0GP@200643|Bacteroidia 976|Bacteroidetes S PHP domain protein - - - - - - - - - - - - - PHJFGMMN_00454 411477.PARMER_00206 0.0 1972.0 COG3250@1|root,COG3250@2|Bacteria,4NEP8@976|Bacteroidetes,2FMRW@200643|Bacteroidia,22X6P@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 2 - - - - - - - - - - - - Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N PHJFGMMN_00455 411477.PARMER_00207 0.0 1020.0 COG3408@1|root,COG3408@2|Bacteria,4NJ97@976|Bacteroidetes,2FQFW@200643|Bacteroidia,22ZCK@171551|Porphyromonadaceae 976|Bacteroidetes G Glycogen debranching enzyme - - - - - - - - - - - - Trehalase PHJFGMMN_00456 411477.PARMER_00209 0.0 1135.0 COG1435@1|root,COG1435@2|Bacteria,4NFWU@976|Bacteroidetes,2FNY3@200643|Bacteroidia 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_00457 411477.PARMER_00210 0.0 2164.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FW4E@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_00458 411477.PARMER_00211 8.67e-228 627.0 COG3712@1|root,COG3712@2|Bacteria,4NKTC@976|Bacteroidetes,2FMS6@200643|Bacteroidia,22XRQ@171551|Porphyromonadaceae 976|Bacteroidetes PT COG3712 Fe2 -dicitrate sensor, membrane component - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_00459 411477.PARMER_00212 0.0 1346.0 COG3408@1|root,COG3408@2|Bacteria,4NFMY@976|Bacteroidetes,2FMA0@200643|Bacteroidia,22XAI@171551|Porphyromonadaceae 976|Bacteroidetes G Glycogen debranching enzyme - - - - - - - - - - - - - PHJFGMMN_00460 411477.PARMER_00213 1.67e-123 352.0 COG1595@1|root,COG1595@2|Bacteria,4NR7M@976|Bacteroidetes,2FRPH@200643|Bacteroidia,22Y7V@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_00461 411477.PARMER_00214 0.0 1122.0 COG1501@1|root,COG1501@2|Bacteria,4NJ93@976|Bacteroidetes,2FNSR@200643|Bacteroidia,22Z4Z@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 31 - - 3.2.1.20 ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 - R00028,R00801,R00802,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 - GH31 - Glyco_hydro_31 PHJFGMMN_00462 411477.PARMER_00215 0.0 1512.0 COG3669@1|root,COG3669@2|Bacteria,4NGKB@976|Bacteroidetes,2FM4I@200643|Bacteroidia,22W7Q@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain - - 3.2.1.50 ko:K01205 ko00531,ko01100,ko04142,map00531,map01100,map04142 M00078 R07816 - ko00000,ko00001,ko00002,ko01000,ko04147 - - - NAGLU,NAGLU_C,NAGLU_N PHJFGMMN_00463 411477.PARMER_00216 0.0 1085.0 2DBEW@1|root,2Z8UY@2|Bacteria,4NH98@976|Bacteroidetes,2FPNP@200643|Bacteroidia,22YKH@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4832) - - - - - - - - - - - - DUF4832,DUF4874 PHJFGMMN_00464 411477.PARMER_00217 5.46e-305 829.0 COG2273@1|root,COG2273@2|Bacteria,4P6MD@976|Bacteroidetes,2FYN8@200643|Bacteroidia,230RQ@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 16 - - - - - - - - - - - - Big_4,Glyco_hydro_16 PHJFGMMN_00465 999419.HMPREF1077_01732 0.0 1009.0 COG3637@1|root,COG3637@2|Bacteria,4NIPZ@976|Bacteroidetes,2FQ2F@200643|Bacteroidia,22XD1@171551|Porphyromonadaceae 976|Bacteroidetes M SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_00466 411477.PARMER_00219 0.0 2276.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia,22WSE@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_00467 411477.PARMER_00220 1.19e-230 635.0 COG3712@1|root,COG3712@2|Bacteria,4P00S@976|Bacteroidetes,2FRD5@200643|Bacteroidia 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_00468 411477.PARMER_00221 2.39e-121 347.0 COG1595@1|root,COG1595@2|Bacteria,4NPZ8@976|Bacteroidetes,2FS6X@200643|Bacteroidia,2308S@171551|Porphyromonadaceae 976|Bacteroidetes K ECF sigma factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_00469 411477.PARMER_00222 0.0 2174.0 2EXZP@1|root,33R8R@2|Bacteria,4P0UW@976|Bacteroidetes,2FWYR@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00470 411477.PARMER_00223 1.18e-221 611.0 COG0196@1|root,COG0196@2|Bacteria,4NEI9@976|Bacteroidetes,2FM7A@200643|Bacteroidia,22WPE@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the ribF family ribF - 2.7.1.26,2.7.7.2 ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00161,R00549 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - FAD_syn,Flavokinase PHJFGMMN_00471 411477.PARMER_00224 5.47e-260 711.0 COG0624@1|root,COG0624@2|Bacteria,4NE2G@976|Bacteroidetes,2FN2Z@200643|Bacteroidia,22X74@171551|Porphyromonadaceae 976|Bacteroidetes E COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related argE - 3.5.1.16 ko:K01438 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028,M00845 R00669,R09107 RC00064,RC00300 ko00000,ko00001,ko00002,ko01000 - - - M20_dimer,Peptidase_M20,Peptidase_M28 PHJFGMMN_00472 411477.PARMER_00225 1.73e-307 838.0 COG2244@1|root,COG2244@2|Bacteria,4NRKF@976|Bacteroidetes,2FWB9@200643|Bacteroidia,22ZWW@171551|Porphyromonadaceae 976|Bacteroidetes S Polysaccharide biosynthesis protein - - - - - - - - - - - - Polysacc_synt,Polysacc_synt_C PHJFGMMN_00473 411477.PARMER_00226 3.06e-246 684.0 COG4942@1|root,COG4942@2|Bacteria,4NH2T@976|Bacteroidetes,2FN4U@200643|Bacteroidia,22VZM@171551|Porphyromonadaceae 976|Bacteroidetes D peptidase yibP - - - - - - - - - - - Peptidase_M23 PHJFGMMN_00474 411477.PARMER_00227 4.52e-200 554.0 2C1B9@1|root,32R9M@2|Bacteria,4NR1Y@976|Bacteroidetes,2FR82@200643|Bacteroidia,22YET@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4292) - - - - - - - - - - - - DUF4292 PHJFGMMN_00475 411477.PARMER_00228 0.0 1139.0 COG0457@1|root,COG0457@2|Bacteria,4NDVW@976|Bacteroidetes,2FMY8@200643|Bacteroidia,22WHK@171551|Porphyromonadaceae 976|Bacteroidetes NU Tetratricopeptide repeat - - - - - - - - - - - - TPR_16,TPR_19,TPR_2,TPR_6,TPR_8 PHJFGMMN_00476 411477.PARMER_00229 3.13e-99 288.0 COG0756@1|root,COG0756@2|Bacteria,4NNI4@976|Bacteroidetes,2FR7A@200643|Bacteroidia,22XVH@171551|Porphyromonadaceae 976|Bacteroidetes F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA dut GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 M00053 R02100,R11896 RC00002 ko00000,ko00001,ko00002,ko01000,ko03400 - - - dUTPase PHJFGMMN_00477 411477.PARMER_00231 0.0 1746.0 COG3250@1|root,COG3250@2|Bacteria,4NEWN@976|Bacteroidetes,2FPM1@200643|Bacteroidia,22W9F@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 2 family bga GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0004565,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0015925,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N PHJFGMMN_00478 411477.PARMER_00232 0.0 1037.0 COG0745@1|root,COG0745@2|Bacteria,4PM6N@976|Bacteroidetes,2G0CY@200643|Bacteroidia,2323Q@171551|Porphyromonadaceae 976|Bacteroidetes T PglZ domain - - - - - - - - - - - - PglZ,Response_reg PHJFGMMN_00479 411477.PARMER_00234 6.4e-97 281.0 COG0802@1|root,COG0802@2|Bacteria,4NS89@976|Bacteroidetes,2FS1V@200643|Bacteroidia,22XWD@171551|Porphyromonadaceae 976|Bacteroidetes S Hydrolase, P-loop family yjeE - - ko:K06925 - - - - ko00000,ko03016 - - - TsaE PHJFGMMN_00480 411477.PARMER_00235 1.07e-43 142.0 2C4GM@1|root,33DB5@2|Bacteria,4NY7G@976|Bacteroidetes,2FW01@200643|Bacteroidia,22YXA@171551|Porphyromonadaceae 976|Bacteroidetes S Immunity protein 17 - - - - - - - - - - - - Imm17 PHJFGMMN_00481 411477.PARMER_00236 0.0 1389.0 COG0557@1|root,COG0557@2|Bacteria,4NE7T@976|Bacteroidetes,2FMM6@200643|Bacteroidia,22VY8@171551|Porphyromonadaceae 976|Bacteroidetes J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs rnr - - ko:K12573,ko:K12585 ko03018,map03018 M00391 - - ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 - - - OB_RNB,RNB,S1 PHJFGMMN_00482 411477.PARMER_00237 1.2e-224 617.0 COG3386@1|root,COG3386@2|Bacteria,4NMJX@976|Bacteroidetes,2FRZF@200643|Bacteroidia 976|Bacteroidetes G SMP-30/Gluconolaconase/LRE-like region - - - ko:K14274 ko00040,map00040 - R02427 RC00713 ko00000,ko00001,ko01000 - - - SGL PHJFGMMN_00484 411477.PARMER_00239 0.0 969.0 COG0246@1|root,COG0246@2|Bacteria,4NEMT@976|Bacteroidetes,2FNTW@200643|Bacteroidia,22XJN@171551|Porphyromonadaceae 976|Bacteroidetes G Mannitol dehydrogenase Rossmann domain uxaB GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006063,GO:0006082,GO:0008150,GO:0008152,GO:0009026,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019586,GO:0019698,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046395,GO:0046396,GO:0046397,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 1.1.1.17,1.1.1.58 ko:K00009,ko:K00041 ko00040,ko00051,ko01100,map00040,map00051,map01100 M00631 R02555,R02703 RC00085 ko00000,ko00001,ko00002,ko01000 - - - Mannitol_dh,Mannitol_dh_C PHJFGMMN_00485 411477.PARMER_00240 0.0 996.0 COG2721@1|root,COG2721@2|Bacteria,4NFVQ@976|Bacteroidetes,2FPGJ@200643|Bacteroidia,22WYT@171551|Porphyromonadaceae 976|Bacteroidetes G D-galactarate dehydratase / Altronate hydrolase, C terminus uxaA - 4.2.1.42,4.2.1.7 ko:K01685,ko:K01708 ko00040,ko00053,ko01100,map00040,map00053,map01100 M00631 R01540,R05608 RC00543 ko00000,ko00001,ko00002,ko01000 - - - GD_AH_C,SAF PHJFGMMN_00486 411477.PARMER_00241 0.0 1032.0 COG1283@1|root,COG1283@2|Bacteria,4NHMY@976|Bacteroidetes,2FMJB@200643|Bacteroidia,22WCR@171551|Porphyromonadaceae 976|Bacteroidetes P Na Pi-cotransporter II-like protein - - - ko:K03324 - - - - ko00000,ko02000 2.A.58.2 - - Na_Pi_cotrans,PhoU PHJFGMMN_00487 411477.PARMER_00242 0.0 1115.0 COG0441@1|root,COG0572@1|root,COG0441@2|Bacteria,COG0572@2|Bacteria,4NIHT@976|Bacteroidetes,2FP3D@200643|Bacteroidia,22VXU@171551|Porphyromonadaceae 976|Bacteroidetes FJ ATPase (AAA udk2 - 2.7.1.48 ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PRK PHJFGMMN_00488 411477.PARMER_00245 0.0 1417.0 COG0642@1|root,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FNIT@200643|Bacteroidia,22WZF@171551|Porphyromonadaceae 976|Bacteroidetes T PAS domain - - - - - - - - - - - - GAF,HATPase_c,HisKA,PAS_4,PAS_9 PHJFGMMN_00489 411477.PARMER_00246 0.0 914.0 COG1508@1|root,COG1508@2|Bacteria,4NE5B@976|Bacteroidetes,2FM52@200643|Bacteroidia,22VUP@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma54 factor rpoN - - ko:K03092 ko02020,ko05111,map02020,map05111 - - - ko00000,ko00001,ko03021 - - - Sigma54_AID,Sigma54_CBD,Sigma54_DBD PHJFGMMN_00490 999419.HMPREF1077_01705 2.8e-135 384.0 COG0671@1|root,COG0671@2|Bacteria,4NPUG@976|Bacteroidetes,2FSUS@200643|Bacteroidia,22YR5@171551|Porphyromonadaceae 976|Bacteroidetes I Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - PAP2 PHJFGMMN_00491 411477.PARMER_00248 1.91e-85 251.0 COG0509@1|root,COG0509@2|Bacteria,4NQ35@976|Bacteroidetes,2FT3J@200643|Bacteroidia,22Y67@171551|Porphyromonadaceae 976|Bacteroidetes E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein gcvH - - ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 M00532 R01221 RC00022,RC02834 ko00000,ko00001,ko00002 - - - GCV_H PHJFGMMN_00492 411477.PARMER_00249 8.44e-107 309.0 COG0041@1|root,COG0041@2|Bacteria,4NME9@976|Bacteroidetes,2FMWN@200643|Bacteroidia,22XMM@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) purE - 5.4.99.18 ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R07405 RC01947 ko00000,ko00001,ko00002,ko01000 - - - AIRC PHJFGMMN_00493 411477.PARMER_00251 0.0 1221.0 COG0821@1|root,COG0821@2|Bacteria,4NE63@976|Bacteroidetes,2FM97@200643|Bacteroidia,22WAH@171551|Porphyromonadaceae 976|Bacteroidetes I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate ispG GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R08689,R10859 RC01486 ko00000,ko00001,ko00002,ko01000 - - - GcpE PHJFGMMN_00494 411477.PARMER_00252 0.0 1241.0 COG5434@1|root,COG5434@2|Bacteria,4NDWX@976|Bacteroidetes,2FMZA@200643|Bacteroidia,22X8E@171551|Porphyromonadaceae 976|Bacteroidetes M Parallel beta-helix repeats glaB - - - - - - - - - - - Beta_helix PHJFGMMN_00495 411477.PARMER_00253 0.0 962.0 COG0215@1|root,COG0215@2|Bacteria,4NE3Y@976|Bacteroidetes,2FM9D@200643|Bacteroidia,22WDE@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the class-I aminoacyl-tRNA synthetase family cysS - 6.1.1.16 ko:K01883 ko00970,map00970 M00359,M00360 R03650 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DALR_2,tRNA-synt_1e PHJFGMMN_00496 411477.PARMER_00254 3.47e-90 264.0 COG2050@1|root,COG2050@2|Bacteria,4NM7W@976|Bacteroidetes,2FS5M@200643|Bacteroidia,22YUF@171551|Porphyromonadaceae 976|Bacteroidetes Q Thioesterase superfamily paaI - - ko:K02614 ko00360,map00360 - R09840 RC00004,RC00014 ko00000,ko00001,ko01000 - - - 4HBT PHJFGMMN_00497 411477.PARMER_00255 0.0 1585.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN9Q@200643|Bacteroidia,22Z9G@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD PHJFGMMN_00498 411477.PARMER_00256 7.9e-149 419.0 COG1136@1|root,COG1136@2|Bacteria,4NFDW@976|Bacteroidetes,2FNWN@200643|Bacteroidia,231SS@171551|Porphyromonadaceae 976|Bacteroidetes V ATPases associated with a variety of cellular activities - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran PHJFGMMN_00499 411477.PARMER_00257 0.0 1560.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FP64@200643|Bacteroidia,231FQ@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD PHJFGMMN_00500 411477.PARMER_00258 2.72e-256 708.0 COG0845@1|root,COG0845@2|Bacteria,4NDUH@976|Bacteroidetes,2FM9Q@200643|Bacteroidia,22W2T@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3 PHJFGMMN_00501 411477.PARMER_00259 9.18e-317 863.0 COG1538@1|root,COG1538@2|Bacteria,4NJ4M@976|Bacteroidetes,2FN0S@200643|Bacteroidia,22WDV@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 - - OEP PHJFGMMN_00502 411477.PARMER_00260 2.09e-125 356.0 COG1853@1|root,COG1853@2|Bacteria,4NNFP@976|Bacteroidetes,2FPWU@200643|Bacteroidia,22XVU@171551|Porphyromonadaceae 976|Bacteroidetes S Conserved protein domain typically associated with flavoprotein - - - - - - - - - - - - Flavin_Reduct PHJFGMMN_00503 411477.PARMER_00261 0.0 887.0 COG1115@1|root,COG1115@2|Bacteria,4NDX7@976|Bacteroidetes,2FMFZ@200643|Bacteroidia,22XG3@171551|Porphyromonadaceae 976|Bacteroidetes E Psort location CytoplasmicMembrane, score 10.00 agcS - - ko:K03310 - - - - ko00000 2.A.25 - - Na_Ala_symp PHJFGMMN_00504 411477.PARMER_00263 0.0 879.0 COG0612@1|root,COG0612@2|Bacteria,4NEE4@976|Bacteroidetes,2FN50@200643|Bacteroidia,22WUV@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the peptidase M16 family - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C PHJFGMMN_00505 411477.PARMER_00262 1.07e-143 405.0 COG0794@1|root,COG0794@2|Bacteria,4NED8@976|Bacteroidetes,2FMXM@200643|Bacteroidia,22X6D@171551|Porphyromonadaceae 976|Bacteroidetes M Iron dicitrate transport regulator FecR kdsD - 5.3.1.13 ko:K06041 ko00540,ko01100,map00540,map01100 M00063 R01530 RC00541 ko00000,ko00001,ko00002,ko01000,ko01005 - - - CBS,SIS PHJFGMMN_00506 411477.PARMER_00264 2.59e-230 633.0 COG0524@1|root,COG0524@2|Bacteria,4NG11@976|Bacteroidetes,2FMAX@200643|Bacteroidia,22XEA@171551|Porphyromonadaceae 976|Bacteroidetes G pfkB family carbohydrate kinase - - 2.7.1.4 ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 - R00760,R00867,R03920 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PfkB PHJFGMMN_00507 411477.PARMER_00265 8.07e-259 709.0 COG2365@1|root,COG2365@2|Bacteria,4NMQ7@976|Bacteroidetes,2FMCH@200643|Bacteroidia,22XUN@171551|Porphyromonadaceae 976|Bacteroidetes T Tyrosine phosphatase family - - 3.1.3.48 ko:K01104 - - - - ko00000,ko01000 - - - Y_phosphatase3 PHJFGMMN_00508 411477.PARMER_00267 0.0 1135.0 COG0513@1|root,COG0513@2|Bacteria,4NEJV@976|Bacteroidetes,2FMB6@200643|Bacteroidia,22W44@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the DEAD box helicase family - - 3.6.4.13 ko:K05592 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03009,ko03019 - - - DEAD,DbpA,Helicase_C PHJFGMMN_00510 411477.PARMER_00271 0.0 1088.0 COG3525@1|root,COG3525@2|Bacteria,4NHSY@976|Bacteroidetes,2FPK5@200643|Bacteroidia,22Z51@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - Glyco_hydro_20,Glyco_hydro_20b PHJFGMMN_00511 411477.PARMER_00272 0.0 1092.0 COG4690@1|root,COG4690@2|Bacteria,4NEQE@976|Bacteroidetes,2FN3E@200643|Bacteroidia,22XFY@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family C69 - - - - - - - - - - - - Peptidase_C69 PHJFGMMN_00512 411477.PARMER_00273 8.23e-286 780.0 COG3579@1|root,COG3579@2|Bacteria,4NE02@976|Bacteroidetes,2FPW0@200643|Bacteroidia,22WUF@171551|Porphyromonadaceae 976|Bacteroidetes E Papain family cysteine protease - - 3.4.22.40 ko:K01372 - - - - ko00000,ko01000,ko01002 - - - Peptidase_C1,Peptidase_C1_2 PHJFGMMN_00513 1235803.C825_05224 0.0 1587.0 COG3250@1|root,COG3250@2|Bacteria,4NHBP@976|Bacteroidetes,2FN8A@200643|Bacteroidia,2307E@171551|Porphyromonadaceae 976|Bacteroidetes G Beta galactosidase small chain - - - - - - - - - - - - Bgal_small_N,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N PHJFGMMN_00514 411477.PARMER_00277 0.0 999.0 COG4146@1|root,COG4146@2|Bacteria,4NE9S@976|Bacteroidetes,2FNXT@200643|Bacteroidia,22XEJ@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family sglT - - ko:K03307 - - - - ko00000 2.A.21 - - SSF PHJFGMMN_00515 411477.PARMER_00278 2.61e-191 530.0 COG1028@1|root,COG1028@2|Bacteria,4NHJ9@976|Bacteroidetes,2FWNX@200643|Bacteroidia 976|Bacteroidetes IQ KR domain - - - - - - - - - - - - adh_short_C2 PHJFGMMN_00516 411477.PARMER_00279 4.99e-298 811.0 COG4948@1|root,COG4948@2|Bacteria,4NIIJ@976|Bacteroidetes,2FUG5@200643|Bacteroidia 976|Bacteroidetes M Mandelate racemase / muconate lactonizing enzyme, N-terminal domain - - 4.2.1.6 ko:K01684 ko00052,ko01100,ko01120,map00052,map01100,map01120 M00552 R03033 RC00543 ko00000,ko00001,ko00002,ko01000 - - - MR_MLE_C,MR_MLE_N PHJFGMMN_00517 411477.PARMER_00280 6.62e-164 458.0 COG0684@1|root,COG0684@2|Bacteria,4NHRR@976|Bacteroidetes,2FWCP@200643|Bacteroidia 976|Bacteroidetes H Aldolase/RraA - - 4.1.3.17 ko:K10218 ko00362,ko00660,ko01120,map00362,map00660,map01120 - R00008,R00350 RC00067,RC00502,RC01205 ko00000,ko00001,ko01000 - - - RraA-like PHJFGMMN_00518 411477.PARMER_00281 9.6e-207 572.0 COG2207@1|root,COG2207@2|Bacteria,4NJ6C@976|Bacteroidetes,2FP6V@200643|Bacteroidia 976|Bacteroidetes K AraC-like ligand binding domain - - - - - - - - - - - - AraC_binding,HTH_18,HTH_AraC PHJFGMMN_00519 411477.PARMER_00282 0.0 2345.0 COG3250@1|root,COG3250@2|Bacteria,4NHBP@976|Bacteroidetes,2FPQV@200643|Bacteroidia 976|Bacteroidetes G Glycosyl hydrolases family 2, TIM barrel domain - - - - - - - - - - - - Bgal_small_N,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N PHJFGMMN_00521 411477.PARMER_02944 1.07e-186 520.0 COG2801@1|root,COG2801@2|Bacteria,4NKGS@976|Bacteroidetes,2FRAQ@200643|Bacteroidia,22YVN@171551|Porphyromonadaceae 976|Bacteroidetes L PFAM Integrase core domain - - - - - - - - - - - - rve,rve_3 PHJFGMMN_00523 411477.PARMER_00288 0.0 1145.0 2DBIZ@1|root,2Z9HU@2|Bacteria,4PMUM@976|Bacteroidetes,2G0GQ@200643|Bacteroidia,2323R@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00524 411477.PARMER_00289 0.0 1463.0 COG3669@1|root,COG3669@2|Bacteria,4NEDX@976|Bacteroidetes,2FPVR@200643|Bacteroidia,22ZGP@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha-L-fucosidase - - 3.2.1.51 ko:K01206 ko00511,map00511 - - - ko00000,ko00001,ko01000,ko04147 - GH29 - Alpha_L_fucos,CHB_HEX_C_1,F5_F8_type_C,Fn3_assoc PHJFGMMN_00525 411477.PARMER_00290 0.0 1635.0 COG1874@1|root,COG1874@2|Bacteria,4NE2P@976|Bacteroidetes,2FN5P@200643|Bacteroidia,22WQT@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 35 - - 3.2.1.23 ko:K12308 ko00052,map00052 - R01105 RC00452 ko00000,ko00001,ko01000 - - - BetaGal_dom4_5,F5_F8_type_C,Glyco_hydro_35 PHJFGMMN_00526 411477.PARMER_00291 0.0 1588.0 COG1554@1|root,COG1554@2|Bacteria,4NG60@976|Bacteroidetes,2FQZD@200643|Bacteroidia,230AM@171551|Porphyromonadaceae 976|Bacteroidetes G COG NOG04001 non supervised orthologous group - - 3.2.1.51 ko:K15923 ko00511,map00511 - - - ko00000,ko00001,ko01000 - GH95 - Glyco_hyd_65N_2 PHJFGMMN_00527 411477.PARMER_00292 2.36e-100 291.0 COG3250@1|root,COG3250@2|Bacteria 2|Bacteria G beta-galactosidase activity lacM - 3.2.1.23,3.2.1.35,3.2.1.51,3.2.1.97 ko:K01190,ko:K01197,ko:K01206,ko:K17624 ko00052,ko00511,ko00531,ko00600,ko01100,map00052,map00511,map00531,map00600,map01100 M00076,M00077 R01105,R01678,R03355,R04783,R06114,R07824,R07825,R10905 RC00049,RC00452 ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042,ko04147 - GH101,GH29 - Bgal_small_N,DUF5011,F5_F8_type_C,Glyco_hydro_2_C,NPCBM,Peptidase_M60 PHJFGMMN_00528 411477.PARMER_00293 0.0 1112.0 COG3119@1|root,COG3119@2|Bacteria,4NHH7@976|Bacteroidetes,2FPC0@200643|Bacteroidia,23030@171551|Porphyromonadaceae 976|Bacteroidetes P Domain of unknown function (DUF4976) - - - - - - - - - - - - DUF4976,Sulfatase PHJFGMMN_00530 411477.PARMER_00295 0.0 1396.0 COG1629@1|root,COG4771@2|Bacteria,4NJPB@976|Bacteroidetes,2FMKA@200643|Bacteroidia 976|Bacteroidetes P Psort location OuterMembrane, score - - - - - - - - - - - - CarbopepD_reg_2 PHJFGMMN_00532 411477.PARMER_00299 3.48e-98 285.0 COG0457@1|root,COG0457@2|Bacteria,4PHIR@976|Bacteroidetes,2FRSJ@200643|Bacteroidia 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - - PHJFGMMN_00534 411477.PARMER_00304 0.0 1428.0 COG3591@1|root,COG3591@2|Bacteria,4NEAK@976|Bacteroidetes,2FMI1@200643|Bacteroidia,22W04@171551|Porphyromonadaceae 976|Bacteroidetes E peptidase dpp7 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009987,GO:0016020,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033218,GO:0034641,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - - - - - - - - - - Peptidase_S46 PHJFGMMN_00535 411477.PARMER_00305 1.39e-311 850.0 COG1808@1|root,COG1808@2|Bacteria,4NDXI@976|Bacteroidetes,2FMJZ@200643|Bacteroidia,22X46@171551|Porphyromonadaceae 976|Bacteroidetes S membrane - - - - - - - - - - - - DUF389 PHJFGMMN_00536 411477.PARMER_00307 0.0 1238.0 COG0642@1|root,COG2205@2|Bacteria,4NJCH@976|Bacteroidetes,2FMSB@200643|Bacteroidia,22ZEQ@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA PHJFGMMN_00537 411477.PARMER_00308 0.0 971.0 COG2244@1|root,COG2244@2|Bacteria,4NDZ0@976|Bacteroidetes,2FKYU@200643|Bacteroidia,22W09@171551|Porphyromonadaceae 976|Bacteroidetes S Polysaccharide biosynthesis protein cap - - - - - - - - - - - Polysacc_synt,Polysacc_synt_3,Polysacc_synt_C PHJFGMMN_00538 411477.PARMER_00309 1.48e-241 665.0 COG2255@1|root,COG2255@2|Bacteria,4NEB9@976|Bacteroidetes,2FNZB@200643|Bacteroidia,22W3Z@171551|Porphyromonadaceae 976|Bacteroidetes L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing ruvB - 3.6.4.12 ko:K03551 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - RuvB_C,RuvB_N PHJFGMMN_00539 411477.PARMER_00310 3.46e-143 404.0 2913J@1|root,2ZNQZ@2|Bacteria,4P6UN@976|Bacteroidetes,2FQYD@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00540 411477.PARMER_00311 1.6e-269 738.0 COG1215@1|root,COG1215@2|Bacteria,4NFI8@976|Bacteroidetes,2FQAZ@200643|Bacteroidia,22W2Z@171551|Porphyromonadaceae 976|Bacteroidetes M Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - GT87 PHJFGMMN_00543 411477.PARMER_00315 0.0 1063.0 COG0457@1|root,COG0457@2|Bacteria,4NFMG@976|Bacteroidetes,2FN4A@200643|Bacteroidia,2307T@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - GerE,TPR_10,TPR_12,TPR_19,TPR_7,TPR_8 PHJFGMMN_00546 411477.PARMER_00321 3.6e-285 780.0 COG1522@1|root,COG1940@1|root,COG1522@2|Bacteria,COG1940@2|Bacteria,4NFZ1@976|Bacteroidetes,2FNEQ@200643|Bacteroidia,22XBR@171551|Porphyromonadaceae 976|Bacteroidetes GK ROK family nagC - 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - HTH_24,ROK PHJFGMMN_00547 411477.PARMER_00323 1.28e-228 628.0 COG0329@1|root,COG0329@2|Bacteria,4NHBA@976|Bacteroidetes,2FM35@200643|Bacteroidia,22WCK@171551|Porphyromonadaceae 976|Bacteroidetes EM Belongs to the DapA family nanA - 4.1.3.3,4.2.1.41,4.3.3.7 ko:K01639,ko:K01707,ko:K01714 ko00053,ko00261,ko00300,ko00520,ko01100,ko01110,ko01120,ko01130,ko01230,map00053,map00261,map00300,map00520,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R01811,R02279,R10147 RC00159,RC00600,RC00678,RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 - - - DHDPS PHJFGMMN_00548 411477.PARMER_00324 0.0 862.0 COG2942@1|root,COG2942@2|Bacteria,4NEFV@976|Bacteroidetes,2FN6V@200643|Bacteroidia,22WNI@171551|Porphyromonadaceae 976|Bacteroidetes G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) nanE - 5.1.3.8 ko:K01787 ko00520,map00520 - R01207 RC00290 ko00000,ko00001,ko01000 - - - GlcNAc_2-epim PHJFGMMN_00549 411477.PARMER_00325 3.32e-303 826.0 COG2271@1|root,COG2271@2|Bacteria,4NFKX@976|Bacteroidetes,2FPKV@200643|Bacteroidia,22WHS@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator Superfamily - - - ko:K08191 - - - - ko00000,ko02000 2.A.1.14.2 - - MFS_1 PHJFGMMN_00550 411477.PARMER_00326 0.0 1090.0 COG4409@1|root,COG4409@2|Bacteria,4NFNK@976|Bacteroidetes,2FNCR@200643|Bacteroidia,22WP4@171551|Porphyromonadaceae 976|Bacteroidetes G N-terminal domain of BNR-repeat neuraminidase nanH - 3.2.1.18 ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 - R04018 RC00028,RC00077 ko00000,ko00001,ko01000,ko02042 - GH33 - BNR_2,BNR_3,BNR_assoc_N PHJFGMMN_00551 411477.PARMER_00327 0.0 1414.0 COG3525@1|root,COG3525@2|Bacteria,4NF9Z@976|Bacteroidetes,2FP2G@200643|Bacteroidia,22XDY@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain protein - - - - - - - - - - - - Glyco_hydro_20,Glyco_hydro_20b PHJFGMMN_00552 411477.PARMER_00328 0.0 2187.0 COG2755@1|root,COG3055@1|root,COG2755@2|Bacteria,COG3055@2|Bacteria,4NK31@976|Bacteroidetes,2G3HM@200643|Bacteroidia,22VZS@171551|Porphyromonadaceae 976|Bacteroidetes E Carbohydrate esterase, sialic acid-specific acetylesterase estS - 3.1.1.53 ko:K05970 - - - - ko00000,ko01000 - - - Lipase_GDSL_2,SASA PHJFGMMN_00553 411477.PARMER_00329 3.75e-141 398.0 COG1611@1|root,COG1611@2|Bacteria,4NGWU@976|Bacteroidetes,2FNYZ@200643|Bacteroidia,22XPU@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the LOG family yvdD - 3.2.2.10 ko:K06966 ko00230,ko00240,map00230,map00240 - R00182,R00510 RC00063,RC00318 ko00000,ko00001,ko01000 - - - Lysine_decarbox PHJFGMMN_00554 411477.PARMER_00330 6.95e-188 520.0 COG0177@1|root,COG0177@2|Bacteria,4NE7K@976|Bacteroidetes,2FMKR@200643|Bacteroidia,22YCK@171551|Porphyromonadaceae 976|Bacteroidetes L Protein of unknown function (DUF2400) - - - - - - - - - - - - DUF2400 PHJFGMMN_00555 411477.PARMER_00331 4.67e-171 477.0 COG4912@1|root,COG4912@2|Bacteria,4NKBS@976|Bacteroidetes,2FM3U@200643|Bacteroidia,22XNZ@171551|Porphyromonadaceae 976|Bacteroidetes L DNA alkylation repair - - - - - - - - - - - - DNA_alkylation PHJFGMMN_00556 411477.PARMER_00332 1.23e-229 632.0 COG1052@1|root,COG1052@2|Bacteria,4PKE3@976|Bacteroidetes,2G31I@200643|Bacteroidia,22WVY@171551|Porphyromonadaceae 976|Bacteroidetes CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family - - 1.1.1.26 ko:K00015 ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120 - R00717,R01388 RC00031,RC00042 ko00000,ko00001,ko01000 - - - 2-Hacid_dh,2-Hacid_dh_C PHJFGMMN_00557 411477.PARMER_00333 1.11e-199 552.0 COG0657@1|root,COG0657@2|Bacteria,4NHDX@976|Bacteroidetes,2FP2B@200643|Bacteroidia,22VVK@171551|Porphyromonadaceae 976|Bacteroidetes I Carboxylesterase family - - - - - - - - - - - - Abhydrolase_3,COesterase PHJFGMMN_00558 411477.PARMER_03612 2.85e-285 780.0 COG0700@1|root,COG2715@1|root,COG0700@2|Bacteria,COG2715@2|Bacteria,4NFUN@976|Bacteroidetes,2FNNY@200643|Bacteroidia,22VV0@171551|Porphyromonadaceae 976|Bacteroidetes S membrane spmA - - ko:K06373 - - - - ko00000 - - - Gate PHJFGMMN_00559 411477.PARMER_03613 2.98e-104 301.0 COG0319@1|root,COG0319@2|Bacteria,4NS93@976|Bacteroidetes,2FS5C@200643|Bacteroidia,22XW3@171551|Porphyromonadaceae 976|Bacteroidetes S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA ybeY - - - - - - - - - - - UPF0054 PHJFGMMN_00560 411477.PARMER_03614 2.34e-286 781.0 COG3391@1|root,COG3391@2|Bacteria,4P1PM@976|Bacteroidetes,2FP6F@200643|Bacteroidia,230NH@171551|Porphyromonadaceae 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 PHJFGMMN_00561 411477.PARMER_03616 0.0 1728.0 COG2972@1|root,COG2972@2|Bacteria,4NFZB@976|Bacteroidetes,2G2V9@200643|Bacteroidia,22ZVP@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase - - - - - - - - - - - - His_kinase,Reg_prop,Y_Y_Y PHJFGMMN_00562 411477.PARMER_03617 5.84e-173 483.0 COG3279@1|root,COG3279@2|Bacteria,4NNHE@976|Bacteroidetes,2FUZW@200643|Bacteroidia,22ZYW@171551|Porphyromonadaceae 976|Bacteroidetes T LytTr DNA-binding domain - - - ko:K02477 - - - - ko00000,ko02022 - - - LytTR,Response_reg PHJFGMMN_00563 411477.PARMER_03618 2.5e-99 288.0 2BFTD@1|root,329NB@2|Bacteria,4PHNK@976|Bacteroidetes,2FSP7@200643|Bacteroidia,2317Q@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00564 411477.PARMER_03619 1.51e-159 446.0 2DV38@1|root,33TU9@2|Bacteria,4P2PK@976|Bacteroidetes,2FRAD@200643|Bacteroidia,230QG@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - OMP_b-brl PHJFGMMN_00565 999419.HMPREF1077_01651 1.02e-96 283.0 2DRZT@1|root,33DVB@2|Bacteria,4NYNJ@976|Bacteroidetes 976|Bacteroidetes S Bacterial PH domain - - - - - - - - - - - - bPH_5 PHJFGMMN_00566 411477.PARMER_03621 0.0 1246.0 COG0445@1|root,COG0445@2|Bacteria,4NFNH@976|Bacteroidetes,2FMA5@200643|Bacteroidia,22WWR@171551|Porphyromonadaceae 976|Bacteroidetes D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 gidA GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - ko:K03495 - - R08701 RC00053,RC00209,RC00870 ko00000,ko03016,ko03036 - - - GIDA,GIDA_assoc PHJFGMMN_00567 411477.PARMER_03622 0.0 1170.0 COG0322@1|root,COG0322@2|Bacteria,4NE61@976|Bacteroidetes,2FNW9@200643|Bacteroidia,22W6Y@171551|Porphyromonadaceae 976|Bacteroidetes L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision uvrC GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - ko:K03703 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - GIY-YIG,HHH_2,HHH_5,UVR,UvrC_HhH_N PHJFGMMN_00568 411477.PARMER_03623 8.49e-105 302.0 COG1490@1|root,COG1490@2|Bacteria,4NNFF@976|Bacteroidetes,2FNMW@200643|Bacteroidia,22XWS@171551|Porphyromonadaceae 976|Bacteroidetes J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality dtd GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - ko:K07560 - - - - ko00000,ko01000,ko03016 - - - Tyr_Deacylase PHJFGMMN_00569 411477.PARMER_03624 4.46e-72 216.0 COG1694@1|root,COG1694@2|Bacteria,4NQ3H@976|Bacteroidetes,2FT28@200643|Bacteroidia,22Y6R@171551|Porphyromonadaceae 976|Bacteroidetes S MazG nucleotide pyrophosphohydrolase domain ypjD - - - - - - - - - - - MazG PHJFGMMN_00570 411477.PARMER_03625 1.83e-206 573.0 COG0274@1|root,COG0274@2|Bacteria,4NGE3@976|Bacteroidetes,2FMTH@200643|Bacteroidia,22W3Q@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate deoC - 4.1.2.4 ko:K01619 ko00030,map00030 - R01066 RC00436,RC00437 ko00000,ko00001,ko01000 - - - DeoC PHJFGMMN_00571 411477.PARMER_03627 1.97e-228 629.0 COG0142@1|root,COG0142@2|Bacteria,4NET2@976|Bacteroidetes,2FMMI@200643|Bacteroidia,22WX7@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the FPP GGPP synthase family ispB - 2.5.1.90 ko:K02523 ko00900,ko01110,map00900,map01110 - R09248 RC00279 ko00000,ko00001,ko01000,ko01006 - - - polyprenyl_synt PHJFGMMN_00572 411477.PARMER_03628 0.0 1830.0 COG0258@1|root,COG0749@1|root,COG0258@2|Bacteria,COG0749@2|Bacteria,4NDVA@976|Bacteroidetes,2FM8X@200643|Bacteroidia,22WNP@171551|Porphyromonadaceae 976|Bacteroidetes L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity polA - 2.7.7.7 ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 - R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko01000,ko03032,ko03400 - - - 5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1 PHJFGMMN_00574 411477.PARMER_03631 2.42e-262 719.0 COG0012@1|root,COG0012@2|Bacteria,4NF7N@976|Bacteroidetes,2FMWX@200643|Bacteroidia,22W5D@171551|Porphyromonadaceae 976|Bacteroidetes J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner ychF - - ko:K06942 - - - - ko00000,ko03009 - - - MMR_HSR1,YchF-GTPase_C PHJFGMMN_00575 411477.PARMER_03633 0.0 954.0 COG1387@1|root,COG1387@2|Bacteria,4NMBC@976|Bacteroidetes,2FNU7@200643|Bacteroidia,22ZUG@171551|Porphyromonadaceae 976|Bacteroidetes E Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 PHJFGMMN_00576 411477.PARMER_03636 1.11e-231 636.0 COG0823@1|root,COG0823@2|Bacteria,4NG4S@976|Bacteroidetes,2FQK8@200643|Bacteroidia,22XUM@171551|Porphyromonadaceae 976|Bacteroidetes U WD40-like Beta Propeller Repeat tolB3 - - - - - - - - - - - PD40 PHJFGMMN_00577 411477.PARMER_03638 1.84e-284 776.0 COG3274@1|root,COG3274@2|Bacteria,4NP3U@976|Bacteroidetes,2FN6D@200643|Bacteroidia,22XW5@171551|Porphyromonadaceae 976|Bacteroidetes S Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 PHJFGMMN_00578 999419.HMPREF1077_01635 1.51e-243 672.0 COG4977@1|root,COG4977@2|Bacteria,4NRMC@976|Bacteroidetes,2FSF8@200643|Bacteroidia,22YUH@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - HTH_18 PHJFGMMN_00579 411477.PARMER_03641 3.78e-228 628.0 2DNBI@1|root,32WMS@2|Bacteria,4NU4W@976|Bacteroidetes,2FQV5@200643|Bacteroidia 976|Bacteroidetes S Fimbrillin-like - - - - - - - - - - - - Mfa_like_1 PHJFGMMN_00580 411477.PARMER_03642 0.0 996.0 COG0531@1|root,COG0531@2|Bacteria,4NIQT@976|Bacteroidetes,2FM2G@200643|Bacteroidia,22VW8@171551|Porphyromonadaceae 976|Bacteroidetes E glutamate gamma-aminobutyrate antiporter gadC - - ko:K20265 ko02024,map02024 - - - ko00000,ko00001,ko02000 2.A.3.7.1,2.A.3.7.3 - - AA_permease_2 PHJFGMMN_00581 411477.PARMER_03643 1.74e-177 495.0 COG0664@1|root,COG0664@2|Bacteria,4PMV8@976|Bacteroidetes,2G0HJ@200643|Bacteroidia 976|Bacteroidetes T Ion channel - - - - - - - - - - - - - PHJFGMMN_00582 411477.PARMER_03645 5.02e-230 633.0 COG2066@1|root,COG2066@2|Bacteria,4NERJ@976|Bacteroidetes,2FM3D@200643|Bacteroidia,22WTN@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the glutaminase family glsA GO:0003674,GO:0003824,GO:0004359,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006543,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009084,GO:0009987,GO:0016053,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 3.5.1.2 ko:K01425 ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230 - R00256,R01579 RC00010,RC02798 ko00000,ko00001,ko01000 - - - Glutaminase PHJFGMMN_00583 411477.PARMER_03646 0.0 981.0 COG0076@1|root,COG0076@2|Bacteria,4NJ2F@976|Bacteroidetes,2FNM0@200643|Bacteroidia,22WZ2@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the group II decarboxylase family gadB - 4.1.1.15,4.1.2.27 ko:K01580,ko:K01634 ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940 M00027,M00100 R00261,R00489,R01682,R02464,R02466,R06516 RC00264,RC00299,RC00721,RC01266 ko00000,ko00001,ko00002,ko01000 - - - Pyridoxal_deC PHJFGMMN_00584 411477.PARMER_03647 1.11e-282 774.0 COG2807@1|root,COG2807@2|Bacteria,4NHUR@976|Bacteroidetes,2FMD3@200643|Bacteroidia,22WZH@171551|Porphyromonadaceae 976|Bacteroidetes P Major Facilitator Superfamily - - - - - - - - - - - - MFS_1 PHJFGMMN_00585 411477.PARMER_03648 1.69e-201 559.0 COG0697@1|root,COG0697@2|Bacteria,4NG65@976|Bacteroidetes,2FN22@200643|Bacteroidia,22ZQV@171551|Porphyromonadaceae 976|Bacteroidetes EG EamA-like transporter family - - - - - - - - - - - - EamA PHJFGMMN_00586 411477.PARMER_03649 2.34e-102 296.0 2EU1G@1|root,33MIH@2|Bacteria,4NZ7F@976|Bacteroidetes,2FUUZ@200643|Bacteroidia,22YW5@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4252) - - - - - - - - - - - - DUF4252 PHJFGMMN_00587 411477.PARMER_03650 4.18e-118 338.0 COG1595@1|root,COG1595@2|Bacteria,4NREV@976|Bacteroidetes,2FNCE@200643|Bacteroidia,22YBZ@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_00588 411477.PARMER_03651 3.33e-88 259.0 2BVQD@1|root,332WQ@2|Bacteria,4NXE1@976|Bacteroidetes,2FQSK@200643|Bacteroidia,22YY8@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00589 411477.PARMER_03652 2.65e-108 312.0 2E9E6@1|root,333MR@2|Bacteria,4NVIJ@976|Bacteroidetes,2FQN2@200643|Bacteroidia,22YN8@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4252) - - - - - - - - - - - - DUF4252 PHJFGMMN_00590 411477.PARMER_03653 0.0 2085.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22W07@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor plug domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_00591 411477.PARMER_03654 0.0 1033.0 COG0702@1|root,COG0702@2|Bacteria,4NEDB@976|Bacteroidetes,2FPB4@200643|Bacteroidia 976|Bacteroidetes GM COG NOG26302 non supervised orthologous group - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_00592 411477.PARMER_03655 0.0 2165.0 COG3250@1|root,COG3250@2|Bacteria,4NIBS@976|Bacteroidetes,2FPZ2@200643|Bacteroidia,22ZBT@171551|Porphyromonadaceae 976|Bacteroidetes G alpha-L-rhamnosidase - - - - - - - - - - - - Glyco_hydro_106 PHJFGMMN_00593 411477.PARMER_03656 0.0 1934.0 COG3408@1|root,COG3408@2|Bacteria,4NESP@976|Bacteroidetes,2FMGH@200643|Bacteroidia,22X6X@171551|Porphyromonadaceae 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - - - - - - - - - - Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N PHJFGMMN_00594 999419.HMPREF1077_01613 0.0 929.0 COG2407@1|root,COG2407@2|Bacteria,4NF0C@976|Bacteroidetes,2FQMA@200643|Bacteroidia 976|Bacteroidetes G Catalyzes the conversion of L-arabinose to L-ribulose - - 5.3.1.4 ko:K01804 ko00040,ko01100,map00040,map01100 - R01761 RC00516 ko00000,ko00001,ko01000 - - - Arabinose_Isome,Fucose_iso_C PHJFGMMN_00595 411477.PARMER_02659 0.0 1694.0 COG0249@1|root,COG0249@2|Bacteria,4NEGB@976|Bacteroidetes,2FMFA@200643|Bacteroidia,22WUH@171551|Porphyromonadaceae 976|Bacteroidetes L that it carries out the mismatch recognition step. This protein has a weak ATPase activity mutS GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - ko:K03555 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - MutS_I,MutS_II,MutS_III,MutS_IV,MutS_V PHJFGMMN_00596 411477.PARMER_02660 0.0 1021.0 COG3119@1|root,COG3119@2|Bacteria,4NEM3@976|Bacteroidetes,2FMG2@200643|Bacteroidia,22WGH@171551|Porphyromonadaceae 976|Bacteroidetes P Sulfatase - - - - - - - - - - - - DUF4976,Sulfatase PHJFGMMN_00598 411477.PARMER_02665 2.46e-158 445.0 28MFD@1|root,2ZASV@2|Bacteria,4NH4N@976|Bacteroidetes,2FQXU@200643|Bacteroidia,22X7H@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00599 411477.PARMER_02666 0.0 3069.0 COG0841@1|root,COG1131@1|root,COG0841@2|Bacteria,COG1131@2|Bacteria,4NF8M@976|Bacteroidetes,2FQY7@200643|Bacteroidia,22XD9@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ABC_tran,ACR_tran PHJFGMMN_00600 411477.PARMER_02667 0.0 1908.0 COG0841@1|root,COG0841@2|Bacteria,4NGCI@976|Bacteroidetes,2FM1V@200643|Bacteroidia,22WWN@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran PHJFGMMN_00601 411477.PARMER_02668 1.3e-242 667.0 COG0845@1|root,COG0845@2|Bacteria,4NERP@976|Bacteroidetes,2FQSG@200643|Bacteroidia,22W5U@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - HlyD_D23,OEP PHJFGMMN_00602 411477.PARMER_02669 0.0 931.0 COG1538@1|root,COG1538@2|Bacteria,4NGIX@976|Bacteroidetes,2FM9H@200643|Bacteroidia,22WV6@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP PHJFGMMN_00603 411477.PARMER_02670 0.0 2146.0 COG1277@1|root,COG1277@2|Bacteria,4NI5T@976|Bacteroidetes,2FNVZ@200643|Bacteroidia,22W2G@171551|Porphyromonadaceae 976|Bacteroidetes E ABC-type transport system involved in multi-copper enzyme maturation permease component - - - - - - - - - - - - Peptidase_M1 PHJFGMMN_00604 411477.PARMER_02671 1.13e-218 602.0 COG1131@1|root,COG1131@2|Bacteria,4NFWM@976|Bacteroidetes,2FP8M@200643|Bacteroidia,22W8V@171551|Porphyromonadaceae 976|Bacteroidetes V AAA domain, putative AbiEii toxin, Type IV TA system - - - - - - - - - - - - ABC_tran PHJFGMMN_00605 411477.PARMER_02672 1.79e-131 373.0 COG1592@1|root,COG1592@2|Bacteria,4NH0J@976|Bacteroidetes,2FNC9@200643|Bacteroidia,22WSM@171551|Porphyromonadaceae 976|Bacteroidetes C Rubrerythrin rbr GO:0003674,GO:0005488,GO:0005506,GO:0006950,GO:0006979,GO:0008150,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0050896 - - - - - - - - - - Rubrerythrin PHJFGMMN_00606 411477.PARMER_02673 0.0 1025.0 COG0659@1|root,COG0659@2|Bacteria,4NF1C@976|Bacteroidetes,2FPEW@200643|Bacteroidia,22WP7@171551|Porphyromonadaceae 976|Bacteroidetes P Sulfate permease sulP - - ko:K03321 - - - - ko00000,ko02000 2.A.53.3 - - STAS,Sulfate_transp PHJFGMMN_00609 411477.PARMER_02676 1.54e-103 325.0 COG3591@1|root,COG3591@2|Bacteria,4NG2K@976|Bacteroidetes,2FNQS@200643|Bacteroidia,22XGI@171551|Porphyromonadaceae 976|Bacteroidetes E Leucine-rich repeat (LRR) protein - - 3.4.21.50 ko:K01337 - - - - ko00000,ko01000,ko01002 - - - Trypsin,Trypsin_2 PHJFGMMN_00610 411477.PARMER_02676 0.0 1407.0 COG3591@1|root,COG3591@2|Bacteria,4NG2K@976|Bacteroidetes,2FNQS@200643|Bacteroidia,22XGI@171551|Porphyromonadaceae 976|Bacteroidetes E Leucine-rich repeat (LRR) protein - - 3.4.21.50 ko:K01337 - - - - ko00000,ko01000,ko01002 - - - Trypsin,Trypsin_2 PHJFGMMN_00611 411477.PARMER_02677 2.4e-185 515.0 COG0731@1|root,COG0731@2|Bacteria,4NJEM@976|Bacteroidetes,2FMWY@200643|Bacteroidia,22WAC@171551|Porphyromonadaceae 976|Bacteroidetes C radical SAM domain protein - - - - - - - - - - - - Fer4_14,Radical_SAM PHJFGMMN_00612 411477.PARMER_02678 0.0 1352.0 COG1555@1|root,COG1555@2|Bacteria,4NE88@976|Bacteroidetes,2FP15@200643|Bacteroidia,22X8S@171551|Porphyromonadaceae 976|Bacteroidetes L Psort location OuterMembrane, score - - - - - - - - - - - - HHH_3 PHJFGMMN_00613 411477.PARMER_02679 8.78e-197 545.0 COG1555@1|root,COG1555@2|Bacteria,4NUGB@976|Bacteroidetes,2FUT7@200643|Bacteroidia,231NR@171551|Porphyromonadaceae 976|Bacteroidetes L photosystem II stabilization - - - - - - - - - - - - - PHJFGMMN_00615 411477.PARMER_02681 4.06e-129 367.0 2CI1G@1|root,2Z7JA@2|Bacteria,4NF1T@976|Bacteroidetes,2FPFD@200643|Bacteroidia,22XYB@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4294) - - - - - - - - - - - - DUF4294 PHJFGMMN_00616 411477.PARMER_02682 1.34e-125 357.0 COG0566@1|root,COG0566@2|Bacteria,4NM8C@976|Bacteroidetes,2FS50@200643|Bacteroidia,22XKS@171551|Porphyromonadaceae 976|Bacteroidetes J RNA methyltransferase spoU - - - - - - - - - - - SpoU_methylase PHJFGMMN_00618 411477.PARMER_02684 3.45e-240 659.0 COG0379@1|root,COG0379@2|Bacteria,4NDVX@976|Bacteroidetes,2FMT0@200643|Bacteroidia,22VXC@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate nadA - 2.5.1.72 ko:K03517 ko00760,ko01100,map00760,map01100 M00115 R04292 RC01119 ko00000,ko00001,ko00002,ko01000 - - - NadA PHJFGMMN_00619 411477.PARMER_02685 0.0 1545.0 COG3292@1|root,COG3292@2|Bacteria,4NDWE@976|Bacteroidetes,2FQ6Y@200643|Bacteroidia,22WCG@171551|Porphyromonadaceae 976|Bacteroidetes T Two component regulator propeller - - - - - - - - - - - - Reg_prop PHJFGMMN_00620 411477.PARMER_02686 1.32e-138 391.0 COG0127@1|root,COG0127@2|Bacteria,4NM42@976|Bacteroidetes,2FP46@200643|Bacteroidia,22XN1@171551|Porphyromonadaceae 976|Bacteroidetes F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions rdgB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 ko:K02428 ko00230,map00230 - R00426,R00720,R01855,R02100,R02720,R03531 RC00002 ko00000,ko00001,ko01000 - - - Ham1p_like PHJFGMMN_00621 411477.PARMER_02687 1.02e-198 551.0 COG1284@1|root,COG1284@2|Bacteria,4NG9F@976|Bacteroidetes,2FP2N@200643|Bacteroidia,22WWJ@171551|Porphyromonadaceae 976|Bacteroidetes S membrane - - - - - - - - - - - - DUF2179,YitT_membrane PHJFGMMN_00622 411477.PARMER_02689 0.0 1949.0 COG0495@1|root,COG0495@2|Bacteria,4NE5K@976|Bacteroidetes,2FM7V@200643|Bacteroidia,22X0R@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the class-I aminoacyl-tRNA synthetase family leuS GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 ko:K01869 ko00970,map00970 M00359,M00360 R03657 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - Anticodon_1,DUF559,tRNA-synt_1,tRNA-synt_1_2 PHJFGMMN_00624 411477.PARMER_02694 6.85e-115 330.0 COG5492@1|root,COG5492@2|Bacteria 2|Bacteria N domain, Protein - - - - - - - - - - - - Big_2,F5_F8_type_C,FGE-sulfatase,Glyco_hydro_53 PHJFGMMN_00625 411477.PARMER_02696 0.0 1077.0 COG3119@1|root,COG3119@2|Bacteria,4NF1X@976|Bacteroidetes,2FMGA@200643|Bacteroidia,22W18@171551|Porphyromonadaceae 976|Bacteroidetes P Sulfatase - - - - - - - - - - - - DUF4976,Sulfatase PHJFGMMN_00626 411477.PARMER_02697 2.46e-248 681.0 COG2768@1|root,COG2768@2|Bacteria,4NGYC@976|Bacteroidetes,2FPAI@200643|Bacteroidia,22X1P@171551|Porphyromonadaceae 976|Bacteroidetes C Domain of unknown function (DUF362) - - - ko:K07138 - - - - ko00000 - - - DUF362 PHJFGMMN_00627 411477.PARMER_02698 2.22e-260 712.0 COG3391@1|root,COG3391@2|Bacteria,4NSU5@976|Bacteroidetes,2FS0J@200643|Bacteroidia,230NQ@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4221) - - - - - - - - - - - - DUF4221 PHJFGMMN_00628 411477.PARMER_02699 0.0 1033.0 COG0029@1|root,COG0029@2|Bacteria,4NGUE@976|Bacteroidetes,2FNMT@200643|Bacteroidia,22WRX@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the oxidation of L-aspartate to iminoaspartate nadB - 1.4.3.16 ko:K00278 ko00250,ko00760,ko01100,map00250,map00760,map01100 M00115 R00357,R00481 RC00006,RC02566 ko00000,ko00001,ko00002,ko01000 - - - FAD_binding_2,Succ_DH_flav_C PHJFGMMN_00629 411477.PARMER_02700 7.45e-167 466.0 28P2C@1|root,32W2C@2|Bacteria,4NSN6@976|Bacteroidetes,2FSPW@200643|Bacteroidia,2318Y@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00630 999419.HMPREF1077_01581 1.45e-93 273.0 2EGMM@1|root,33ADT@2|Bacteria 2|Bacteria S Bacterial PH domain - - - - - - - - - - - - bPH_4 PHJFGMMN_00632 411477.PARMER_02704 0.0 868.0 COG1249@1|root,COG1249@2|Bacteria,4NDVC@976|Bacteroidetes,2FM8Y@200643|Bacteroidia,22WU2@171551|Porphyromonadaceae 976|Bacteroidetes C Dihydrolipoyl dehydrogenase lpdA - 1.8.1.4 ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00036,M00307,M00532 R00209,R01221,R01698,R03815,R07618,R08549 RC00004,RC00022,RC00583,RC02742,RC02833,RC02834 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 - - - Pyr_redox_2,Pyr_redox_dim PHJFGMMN_00633 411477.PARMER_02706 0.0 1036.0 COG0423@1|root,COG0423@2|Bacteria,4NE1C@976|Bacteroidetes,2FMM2@200643|Bacteroidia,22WCA@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of glycine to tRNA(Gly) glyQS - 6.1.1.14 ko:K01880 ko00970,map00970 M00359,M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - HGTP_anticodon,tRNA-synt_2b PHJFGMMN_00634 411477.PARMER_02707 1.01e-135 384.0 COG0545@1|root,COG0545@2|Bacteria,4NVE8@976|Bacteroidetes,2FUUP@200643|Bacteroidia 976|Bacteroidetes M Peptidyl-prolyl cis-trans isomerase - - 5.2.1.8 ko:K01802,ko:K03773 - - - - ko00000,ko01000,ko03110 - - - FKBP_C PHJFGMMN_00635 411477.PARMER_02708 9.96e-135 382.0 COG3059@1|root,COG3059@2|Bacteria,4NG9V@976|Bacteroidetes,2FMSP@200643|Bacteroidia,22Y9K@171551|Porphyromonadaceae 976|Bacteroidetes S membrane ykgB - - - - - - - - - - - DUF417 PHJFGMMN_00636 411477.PARMER_02710 3.77e-139 393.0 COG1595@1|root,COG1595@2|Bacteria,4NS12@976|Bacteroidetes,2FQ76@200643|Bacteroidia,22YD2@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_00637 411477.PARMER_02711 3.43e-234 644.0 COG3712@1|root,COG3712@2|Bacteria,4NJY6@976|Bacteroidetes,2G303@200643|Bacteroidia,22XZK@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_00638 411477.PARMER_02712 0.0 2240.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FW4E@200643|Bacteroidia,22XIY@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_00639 411477.PARMER_02713 0.0 1326.0 COG0614@1|root,COG0702@1|root,COG0614@2|Bacteria,COG0702@2|Bacteria,4NFDZ@976|Bacteroidetes,2G094@200643|Bacteroidia 976|Bacteroidetes P SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_00640 411477.PARMER_02714 2.15e-286 780.0 COG1409@1|root,COG1409@2|Bacteria,4NUQV@976|Bacteroidetes,2FTMD@200643|Bacteroidia 976|Bacteroidetes S Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos PHJFGMMN_00641 411477.PARMER_02715 2.91e-241 662.0 COG2220@1|root,COG2220@2|Bacteria,4NMHS@976|Bacteroidetes 976|Bacteroidetes S Zn-dependent hydrolases of the beta-lactamase fold - - - - - - - - - - - - Lactamase_B_3 PHJFGMMN_00643 411477.PARMER_02717 5.08e-107 310.0 COG1595@1|root,COG1595@2|Bacteria,4NS12@976|Bacteroidetes,2FQ76@200643|Bacteroidia,22Y3I@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_00644 411477.PARMER_02718 5.39e-250 686.0 COG3712@1|root,COG3712@2|Bacteria,4NKN5@976|Bacteroidetes,2FP6E@200643|Bacteroidia,230DS@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_00645 411477.PARMER_02719 0.0 2242.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FQX3@200643|Bacteroidia,2302T@171551|Porphyromonadaceae 976|Bacteroidetes P Secretin and TonB N terminus short domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_00646 411477.PARMER_02720 0.0 1199.0 COG0614@1|root,COG0614@2|Bacteria 2|Bacteria P abc-type fe3 -hydroxamate transport system, periplasmic component - - - ko:K02016,ko:K21572 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14,8.A.46.1,8.A.46.3 - - Glyco_trans_1_2,Peripla_BP_2,SusD-like_3,SusD_RagB PHJFGMMN_00647 411477.PARMER_02721 0.0 2050.0 28IXK@1|root,2Z8VG@2|Bacteria,4NHBH@976|Bacteroidetes,2FQIC@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00648 411477.PARMER_02722 0.0 2160.0 COG0457@1|root,COG0457@2|Bacteria,4NIBU@976|Bacteroidetes,2FP1P@200643|Bacteroidia,231U2@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF5107) - - - - - - - - - - - - DUF5107,TPR_16,TPR_8 PHJFGMMN_00649 411477.PARMER_02724 2.16e-198 549.0 COG0657@1|root,COG0657@2|Bacteria,4NH62@976|Bacteroidetes,2FKYA@200643|Bacteroidia,22XNS@171551|Porphyromonadaceae 976|Bacteroidetes I alpha/beta hydrolase fold - - - - - - - - - - - - Abhydrolase_3,Peptidase_S9 PHJFGMMN_00650 411477.PARMER_02725 0.0 1244.0 2DBP8@1|root,2ZA84@2|Bacteria,4NKHW@976|Bacteroidetes,2FQDJ@200643|Bacteroidia,22ZNZ@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00651 411477.PARMER_02726 2.11e-217 599.0 COG3622@1|root,COG3622@2|Bacteria,4NG0V@976|Bacteroidetes,2FSYZ@200643|Bacteroidia,22Z34@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - 5.3.1.22 ko:K01816 ko00630,ko01100,map00630,map01100 - R01394 RC00511 ko00000,ko00001,ko01000 - - - AP_endonuc_2 PHJFGMMN_00652 411477.PARMER_02727 1.07e-297 809.0 COG3507@1|root,COG3507@2|Bacteria,4PKZY@976|Bacteroidetes,2G09G@200643|Bacteroidia,22WA2@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 43 - - - - - - - - - - - - Glyco_hydro_43 PHJFGMMN_00653 411477.PARMER_02728 1.66e-206 572.0 COG1284@1|root,COG1284@2|Bacteria,4NG9F@976|Bacteroidetes,2FP2N@200643|Bacteroidia,22WWJ@171551|Porphyromonadaceae 976|Bacteroidetes S membrane - - - - - - - - - - - - DUF2179,YitT_membrane PHJFGMMN_00654 411477.PARMER_02729 0.0 1862.0 COG0612@1|root,COG0612@2|Bacteria,4NFY0@976|Bacteroidetes,2FMCE@200643|Bacteroidia,22WW4@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the peptidase M16 family - - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16,Peptidase_M16_C PHJFGMMN_00655 999419.HMPREF1077_01561 0.0 991.0 COG0673@1|root,COG0673@2|Bacteria,4NH13@976|Bacteroidetes,2FPIH@200643|Bacteroidia,22WA6@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA PHJFGMMN_00656 411477.PARMER_02732 2.8e-171 478.0 2CEK0@1|root,321UV@2|Bacteria,4NUC9@976|Bacteroidetes,2FQ1Y@200643|Bacteroidia,22YU9@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4271) - - - - - - - - - - - - DUF4271 PHJFGMMN_00657 411477.PARMER_02733 1.14e-182 508.0 COG1587@1|root,COG1587@2|Bacteria,4NEQ3@976|Bacteroidetes,2FMX9@200643|Bacteroidia,22W2D@171551|Porphyromonadaceae 976|Bacteroidetes H Uroporphyrinogen-III synthase hemD - 4.2.1.75 ko:K01719 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R03165 RC01861 ko00000,ko00001,ko00002,ko01000 - - - HEM4 PHJFGMMN_00658 411477.PARMER_02734 1.24e-82 244.0 COG0594@1|root,COG0594@2|Bacteria,4NUMM@976|Bacteroidetes,2FUKM@200643|Bacteroidia,22YNG@171551|Porphyromonadaceae 976|Bacteroidetes J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme rnpA - 3.1.26.5 ko:K03536 - - - - ko00000,ko01000,ko03016 - - - Ribonuclease_P PHJFGMMN_00659 411477.PARMER_02735 6.23e-51 160.0 COG0759@1|root,COG0759@2|Bacteria,4NV1N@976|Bacteroidetes,2FTU6@200643|Bacteroidia,22YS5@171551|Porphyromonadaceae 976|Bacteroidetes S Could be involved in insertion of integral membrane proteins into the membrane yidD - - ko:K08998 - - - - ko00000 - - - Haemolytic PHJFGMMN_00660 411477.PARMER_02736 2.73e-153 430.0 COG0084@1|root,COG0084@2|Bacteria,4NSGW@976|Bacteroidetes,2FQ90@200643|Bacteroidia,22Y9I@171551|Porphyromonadaceae 976|Bacteroidetes L hydrolase, TatD family - - - ko:K03424 - - - - ko00000,ko01000 - - - TatD_DNase PHJFGMMN_00661 411477.PARMER_02737 1.91e-304 830.0 COG0162@1|root,COG0162@2|Bacteria,4NF19@976|Bacteroidetes,2FN0B@200643|Bacteroidia,22VXJ@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) tyrS - 6.1.1.1 ko:K01866 ko00970,map00970 M00359,M00360 R02918 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - S4,tRNA-synt_1b PHJFGMMN_00663 411477.PARMER_02740 0.0 1510.0 COG3408@1|root,COG3408@2|Bacteria,4NESP@976|Bacteroidetes,2FMGH@200643|Bacteroidia,22X2T@171551|Porphyromonadaceae 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - 3.2.1.40 ko:K05989 - - - - ko00000,ko01000 - - - Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N PHJFGMMN_00664 411477.PARMER_02741 8.94e-118 336.0 COG3408@1|root,COG3408@2|Bacteria,4NESP@976|Bacteroidetes,2FMGH@200643|Bacteroidia 976|Bacteroidetes G Alpha-L-rhamnosidase N-terminal domain protein - - 3.2.1.40 ko:K05989 - - - - ko00000,ko01000 - - - Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N PHJFGMMN_00665 411477.PARMER_02742 9.68e-119 338.0 COG3467@1|root,COG3467@2|Bacteria,4NPDK@976|Bacteroidetes,2G2MH@200643|Bacteroidia,22Y2U@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:Pyridox_oxidase - - - ko:K07005 - - - - ko00000 - - - Pyridox_ox_2 PHJFGMMN_00666 411477.PARMER_02745 9.69e-222 610.0 COG1045@1|root,COG1045@2|Bacteria,4NGZ7@976|Bacteroidetes,2FM9U@200643|Bacteroidia,22XAZ@171551|Porphyromonadaceae 976|Bacteroidetes E Serine acetyltransferase cysE - 2.3.1.30 ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 M00021 R00586 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 - - - Hexapep,SATase_N PHJFGMMN_00667 411477.PARMER_02746 0.0 1003.0 COG0116@1|root,COG0116@2|Bacteria,4NFJM@976|Bacteroidetes,2FMNN@200643|Bacteroidia,22WIQ@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the methyltransferase superfamily rlmL - - ko:K07444 - - - - ko00000,ko01000 - - - THUMP,UPF0020 PHJFGMMN_00668 411477.PARMER_02747 0.0 1514.0 COG1506@1|root,COG1506@2|Bacteria,4NF7I@976|Bacteroidetes,2FMJD@200643|Bacteroidia,22W5C@171551|Porphyromonadaceae 976|Bacteroidetes E Peptidase, S9A B C family, catalytic domain protein pepX2 - 3.4.14.12,3.4.14.5 ko:K01278,ko:K18574 ko04974,map04974 - - - ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 - - - DPPIV_N,Peptidase_S9 PHJFGMMN_00669 411477.PARMER_02749 2.09e-305 832.0 COG0151@1|root,COG0151@2|Bacteria,4NEUN@976|Bacteroidetes,2FN59@200643|Bacteroidia,22WGM@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the GARS family purD - 6.3.4.13 ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04144 RC00090,RC00166 ko00000,ko00001,ko00002,ko01000 - - - GARS_A,GARS_C,GARS_N PHJFGMMN_00670 999419.HMPREF1077_01546 3.17e-236 650.0 2DQYE@1|root,339DJ@2|Bacteria,4NSHZ@976|Bacteroidetes,2FMS8@200643|Bacteroidia,22YSV@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - PHJFGMMN_00671 411477.PARMER_02751 4.56e-104 300.0 COG1238@1|root,COG1238@2|Bacteria,4NQAX@976|Bacteroidetes,2FRY9@200643|Bacteroidia,22Y6N@171551|Porphyromonadaceae 976|Bacteroidetes S SNARE associated Golgi protein - - - - - - - - - - - - SNARE_assoc PHJFGMMN_00672 411477.PARMER_02752 4.3e-168 469.0 2F6UR@1|root,33ZAV@2|Bacteria,4P40C@976|Bacteroidetes,2FT2S@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF5036) - - - - - - - - - - - - DUF5036 PHJFGMMN_00673 411477.PARMER_02754 3.34e-110 316.0 COG2207@1|root,COG2207@2|Bacteria 2|Bacteria K Transcriptional regulator - - - - - - - - - - - - HTH_18 PHJFGMMN_00674 411477.PARMER_02755 0.0 864.0 COG1073@1|root,COG1073@2|Bacteria,4NFCA@976|Bacteroidetes,2FP8B@200643|Bacteroidia,22XUE@171551|Porphyromonadaceae 976|Bacteroidetes S PS-10 peptidase S37 - - - - - - - - - - - - Peptidase_S37 PHJFGMMN_00675 411477.PARMER_02756 3.62e-254 696.0 COG1600@1|root,COG1600@2|Bacteria,4NFCJ@976|Bacteroidetes,2FPCB@200643|Bacteroidia,22W87@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) queG - 1.17.99.6 ko:K18979 - - - - ko00000,ko01000,ko03016 - - - DUF1730,Fer4_16 PHJFGMMN_00676 411477.PARMER_02757 3.09e-155 434.0 COG0726@1|root,COG0726@2|Bacteria,4NM7D@976|Bacteroidetes,2FMF7@200643|Bacteroidia,22XKK@171551|Porphyromonadaceae 976|Bacteroidetes G polysaccharide deacetylase pgdA_1 - - - - - - - - - - - Polysacc_deac_1 PHJFGMMN_00677 411477.PARMER_02758 0.0 2167.0 COG0457@1|root,COG0697@1|root,COG0457@2|Bacteria,COG0697@2|Bacteria,4PKRH@976|Bacteroidetes,2G090@200643|Bacteroidia,23243@171551|Porphyromonadaceae 976|Bacteroidetes EG Protein of unknown function (DUF2723) - - - - - - - - - - - - DUF2723 PHJFGMMN_00678 411477.PARMER_02764 6.95e-114 325.0 COG4225@1|root,COG4225@2|Bacteria,4NDYS@976|Bacteroidetes,2FM61@200643|Bacteroidia,231NX@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl Hydrolase Family 88 - - - - - - - - - - - - Glyco_hydro_88 PHJFGMMN_00679 411477.PARMER_02765 6.38e-26 95.1 COG1331@1|root,COG1331@2|Bacteria 2|Bacteria O Highly conserved protein containing a thioredoxin domain ugl - 3.2.1.180 ko:K18581 - - R10867 RC00049,RC02427 ko00000,ko01000 - GH88 - Glyco_hydro_88 PHJFGMMN_00680 411477.PARMER_02766 1.1e-114 330.0 COG0394@1|root,COG0394@2|Bacteria,4NNN6@976|Bacteroidetes,2FSB5@200643|Bacteroidia,22Y30@171551|Porphyromonadaceae 976|Bacteroidetes T Low molecular weight phosphatase family arsC - 1.20.4.1 ko:K03741 - - - - ko00000,ko01000 - - - LMWPc PHJFGMMN_00681 1235803.C825_01756 8.78e-08 54.7 COG1629@1|root,COG4771@2|Bacteria,4NFU8@976|Bacteroidetes,2G2FE@200643|Bacteroidia 976|Bacteroidetes P TonB-dependent receptor - - - - - - - - - - - - CarbopepD_reg_2 PHJFGMMN_00682 411477.PARMER_02770 0.0 1769.0 COG0188@1|root,COG0188@2|Bacteria,4NERI@976|Bacteroidetes,2FPAU@200643|Bacteroidia,22WF8@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the type II topoisomerase GyrA ParC subunit family parC - - ko:K02621 - - - - ko00000,ko01000,ko02048,ko03032,ko03036 - - - DNA_topoisoIV PHJFGMMN_00683 411477.PARMER_02771 1.25e-208 577.0 29UC5@1|root,30FNJ@2|Bacteria,4NS0Y@976|Bacteroidetes,2FNR7@200643|Bacteroidia,22Y6Z@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3316) - - - - - - - - - - - - DUF3316 PHJFGMMN_00684 411477.PARMER_02772 3.82e-258 706.0 COG0793@1|root,COG0793@2|Bacteria,4NFEN@976|Bacteroidetes,2FMMP@200643|Bacteroidia,22WMS@171551|Porphyromonadaceae 976|Bacteroidetes M peptidase S41 - - - - - - - - - - - - Peptidase_S41,Tricorn_C1 PHJFGMMN_00686 411477.PARMER_02774 9.56e-216 595.0 COG0803@1|root,COG0803@2|Bacteria,4NGMC@976|Bacteroidetes,2FMQR@200643|Bacteroidia,22XUG@171551|Porphyromonadaceae 976|Bacteroidetes P Zinc-uptake complex component A periplasmic mntA - - ko:K09815,ko:K11707 ko02010,map02010 M00242,M00319 - - ko00000,ko00001,ko00002,ko02000 3.A.1.15,3.A.1.15.3,3.A.1.15.5 - - ZnuA PHJFGMMN_00687 411477.PARMER_02775 3.25e-177 496.0 COG1121@1|root,COG1121@2|Bacteria,4NHZ9@976|Bacteroidetes,2FM2P@200643|Bacteroidia,22VV3@171551|Porphyromonadaceae 976|Bacteroidetes P ABC transporter, ATP-binding protein znuC - - ko:K09817 ko02010,map02010 M00242 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.15.3,3.A.1.15.5 - - ABC_tran PHJFGMMN_00688 411477.PARMER_02775 1.98e-35 128.0 COG1121@1|root,COG1121@2|Bacteria,4NHZ9@976|Bacteroidetes,2FM2P@200643|Bacteroidia,22VV3@171551|Porphyromonadaceae 976|Bacteroidetes P ABC transporter, ATP-binding protein znuC - - ko:K09817 ko02010,map02010 M00242 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.15.3,3.A.1.15.5 - - ABC_tran PHJFGMMN_00689 411477.PARMER_02776 1.6e-249 684.0 COG0451@1|root,COG0451@2|Bacteria,4NEJJ@976|Bacteroidetes,2FNM5@200643|Bacteroidia,22W40@171551|Porphyromonadaceae 976|Bacteroidetes GM NAD dependent epimerase dehydratase family protein - - 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 - - - Epimerase PHJFGMMN_00690 411477.PARMER_02777 5.51e-156 441.0 COG3595@1|root,COG3595@2|Bacteria,4NSAQ@976|Bacteroidetes,2G1GM@200643|Bacteroidia,22YYE@171551|Porphyromonadaceae 976|Bacteroidetes S Putative auto-transporter adhesin, head GIN domain - - - - - - - - - - - - DUF2807 PHJFGMMN_00691 411477.PARMER_02778 1.5e-122 357.0 COG3595@1|root,COG3595@2|Bacteria,4NX4P@976|Bacteroidetes,2G3DB@200643|Bacteroidia,2321K@171551|Porphyromonadaceae 976|Bacteroidetes S Putative auto-transporter adhesin, head GIN domain - - - - - - - - - - - - DUF2807 PHJFGMMN_00692 411477.PARMER_02779 6.95e-264 721.0 2DBNR@1|root,2ZA54@2|Bacteria,4NHW9@976|Bacteroidetes,2FZFG@200643|Bacteroidia,231AZ@171551|Porphyromonadaceae 976|Bacteroidetes S Methane oxygenase PmoA - - - - - - - - - - - - PmoA PHJFGMMN_00693 411477.PARMER_02781 0.0 1046.0 COG0673@1|root,COG0673@2|Bacteria,4NIF1@976|Bacteroidetes,2FX47@200643|Bacteroidia 976|Bacteroidetes S Oxidoreductase family, C-terminal alpha/beta domain - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C PHJFGMMN_00694 411477.PARMER_02782 4.33e-185 514.0 COG4758@1|root,COG4758@2|Bacteria,4NQRE@976|Bacteroidetes,2FMXH@200643|Bacteroidia,22YB9@171551|Porphyromonadaceae 976|Bacteroidetes S Cell wall-active antibiotics response 4TMS YvqF - - - - - - - - - - - - DUF2154 PHJFGMMN_00695 411477.PARMER_02783 5.9e-189 525.0 COG3279@1|root,COG3279@2|Bacteria,4NRFD@976|Bacteroidetes,2FM05@200643|Bacteroidia,22Y7Y@171551|Porphyromonadaceae 976|Bacteroidetes KT LytTr DNA-binding domain - - - - - - - - - - - - LytTR PHJFGMMN_00697 411477.PARMER_02784 5.69e-189 524.0 COG1718@1|root,COG1718@2|Bacteria,4NEF6@976|Bacteroidetes,2FQ2B@200643|Bacteroidia,22WD8@171551|Porphyromonadaceae 976|Bacteroidetes DT aminotransferase class I and II - - - - - - - - - - - - - PHJFGMMN_00698 411477.PARMER_02785 2.14e-87 256.0 2CP0Z@1|root,32SI8@2|Bacteria,4NQDB@976|Bacteroidetes,2FSIV@200643|Bacteroidia,22Y7G@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3037) - - - - - - - - - - - - DUF3037 PHJFGMMN_00699 411477.PARMER_02786 3.29e-120 372.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,22WTZ@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,Plug,STN,TonB_dep_Rec PHJFGMMN_00700 411477.PARMER_02786 0.0 1849.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,22WTZ@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,Plug,STN,TonB_dep_Rec PHJFGMMN_00701 999419.HMPREF1077_01505 0.0 1166.0 COG0457@1|root,COG0457@2|Bacteria,4NDX0@976|Bacteroidetes,2FM6J@200643|Bacteroidia,22X0J@171551|Porphyromonadaceae 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_00702 411477.PARMER_02788 2.78e-221 608.0 COG3568@1|root,COG3568@2|Bacteria,4NHXV@976|Bacteroidetes,2FNR3@200643|Bacteroidia,22W7F@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos PHJFGMMN_00703 411477.PARMER_02789 2.91e-180 502.0 COG1555@1|root,COG1555@2|Bacteria,4NK4K@976|Bacteroidetes,2FPCH@200643|Bacteroidia,22Y5J@171551|Porphyromonadaceae 976|Bacteroidetes L Helix-hairpin-helix motif - - - - - - - - - - - - HHH_3 PHJFGMMN_00704 411477.PARMER_02790 0.0 876.0 COG0733@1|root,COG0733@2|Bacteria,4NGQ5@976|Bacteroidetes,2FMVD@200643|Bacteroidia,22X4U@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family - - - ko:K03308 - - - - ko00000 2.A.22.4,2.A.22.5 - - SNF PHJFGMMN_00705 411477.PARMER_02791 2.4e-153 431.0 COG1136@1|root,COG1136@2|Bacteria,4NGDU@976|Bacteroidetes,2FKZC@200643|Bacteroidia,22W92@171551|Porphyromonadaceae 976|Bacteroidetes V Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner lolD - - ko:K09810 ko02010,map02010 M00255 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.125 - - ABC_tran PHJFGMMN_00706 411477.PARMER_02792 1.5e-170 476.0 COG1179@1|root,COG1179@2|Bacteria,4NEKB@976|Bacteroidetes,2FMG4@200643|Bacteroidia,22XGU@171551|Porphyromonadaceae 976|Bacteroidetes H COGs COG1179 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 1 hypB - - ko:K22132 - - - - ko00000,ko03016 - - - ThiF PHJFGMMN_00707 411477.PARMER_02793 0.0 1345.0 COG3525@1|root,COG3525@2|Bacteria,4NFC5@976|Bacteroidetes,2FQ22@200643|Bacteroidia,22X8T@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - Glyco_hydro_20,Glyco_hydro_20b PHJFGMMN_00709 411477.PARMER_02796 0.0 1264.0 COG1053@1|root,COG1053@2|Bacteria,4NG56@976|Bacteroidetes,2FNK8@200643|Bacteroidia,22YF8@171551|Porphyromonadaceae 976|Bacteroidetes C FAD dependent oxidoreductase - - - - - - - - - - - - FAD_oxidored PHJFGMMN_00710 411477.PARMER_02797 0.0 1976.0 COG0644@1|root,COG0654@1|root,COG0644@2|Bacteria,COG0654@2|Bacteria,4NR3F@976|Bacteroidetes,2G2WD@200643|Bacteroidia,22ZRE@171551|Porphyromonadaceae 976|Bacteroidetes CH TAT (twin-arginine translocation) pathway signal sequence - - - - - - - - - - - - FAD_oxidored,TAT_signal PHJFGMMN_00711 411477.PARMER_02798 0.0 1378.0 COG2081@1|root,COG2081@2|Bacteria,4PMNY@976|Bacteroidetes,2FQ67@200643|Bacteroidia,22W1E@171551|Porphyromonadaceae 976|Bacteroidetes S FAD dependent oxidoreductase - - - - - - - - - - - - FAD_oxidored PHJFGMMN_00712 411477.PARMER_02799 0.0 1263.0 COG1435@1|root,COG1435@2|Bacteria,4NFWU@976|Bacteroidetes,2FN5G@200643|Bacteroidia,22ZR8@171551|Porphyromonadaceae 976|Bacteroidetes F Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_00713 411477.PARMER_02800 0.0 2235.0 COG1629@1|root,COG1629@2|Bacteria,4NIPG@976|Bacteroidetes,2FRQY@200643|Bacteroidia,22Z8M@171551|Porphyromonadaceae 976|Bacteroidetes P Secretin and TonB N terminus short domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_00714 411477.PARMER_02801 1.63e-233 642.0 COG3712@1|root,COG3712@2|Bacteria,4NMA2@976|Bacteroidetes,2FXKB@200643|Bacteroidia 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_00715 411477.PARMER_02802 8.95e-129 366.0 COG1595@1|root,COG1595@2|Bacteria,4NR0P@976|Bacteroidetes,2FN1H@200643|Bacteroidia 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_00716 411477.PARMER_02803 0.0 1394.0 COG0306@1|root,COG0306@2|Bacteria,4NFCB@976|Bacteroidetes,2FN8Q@200643|Bacteroidia,22WHP@171551|Porphyromonadaceae 976|Bacteroidetes U Phosphate transporter - - - - - - - - - - - - PHO4 PHJFGMMN_00717 411477.PARMER_02804 6.76e-213 587.0 28IAJ@1|root,2Z8D5@2|Bacteria,4NJNA@976|Bacteroidetes,2FQ8K@200643|Bacteroidia,22WD2@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00718 411477.PARMER_02805 2.61e-314 857.0 2C31A@1|root,2Z7UP@2|Bacteria,4NECU@976|Bacteroidetes,2FPEI@200643|Bacteroidia,22VWH@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - PHJFGMMN_00719 411477.PARMER_02806 1.98e-190 528.0 COG0637@1|root,COG0637@2|Bacteria,4NIYB@976|Bacteroidetes,2FM33@200643|Bacteroidia,22WA4@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the HAD-like hydrolase superfamily. PhnX family phnX - 3.11.1.1 ko:K05306 ko00440,ko01100,ko01120,map00440,map01100,map01120 - R00747 RC00368 ko00000,ko00001,ko01000 - - - HAD_2 PHJFGMMN_00720 411477.PARMER_02807 3.73e-269 736.0 COG0075@1|root,COG0075@2|Bacteria,4NH61@976|Bacteroidetes,2FP5I@200643|Bacteroidia,22X2A@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily phnW - 2.6.1.37 ko:K03430 ko00440,ko01100,ko01120,map00440,map01100,map01120 - R04152 RC00008,RC00062 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_5 PHJFGMMN_00721 411477.PARMER_02808 3.45e-198 548.0 COG0671@1|root,COG0671@2|Bacteria,4NJEX@976|Bacteroidetes,2G39P@200643|Bacteroidia,22XX7@171551|Porphyromonadaceae 976|Bacteroidetes I Acid phosphatase homologues - - - - - - - - - - - - PAP2 PHJFGMMN_00722 411477.PARMER_02809 0.0 1032.0 COG1541@1|root,COG1541@2|Bacteria,4NFRI@976|Bacteroidetes,2FMJX@200643|Bacteroidia,22WCF@171551|Porphyromonadaceae 976|Bacteroidetes H GH3 auxin-responsive promoter - - - - - - - - - - - - GH3 PHJFGMMN_00723 411477.PARMER_02810 2.64e-244 671.0 COG0205@1|root,COG0205@2|Bacteria,4NGN7@976|Bacteroidetes,2FNIF@200643|Bacteroidia,22X1H@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis pfkA - 2.7.1.11,2.7.1.90 ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 - R00756,R00764,R02073,R03236,R04779 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PFK PHJFGMMN_00724 411477.PARMER_02811 2.84e-199 553.0 COG0571@1|root,COG0571@2|Bacteria,4NE0N@976|Bacteroidetes,2FMV3@200643|Bacteroidia,22W54@171551|Porphyromonadaceae 976|Bacteroidetes J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism rnc GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 ko:K03685 ko03008,ko05205,map03008,map05205 - - - ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 - - - Ribonucleas_3_3,dsrm PHJFGMMN_00725 411477.PARMER_02812 1.26e-305 833.0 COG0304@1|root,COG0304@2|Bacteria,4NEKC@976|Bacteroidetes,2FNDB@200643|Bacteroidia,22W73@171551|Porphyromonadaceae 976|Bacteroidetes I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP fabF - 2.3.1.179 ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Ketoacyl-synt_C,ketoacyl-synt PHJFGMMN_00726 411477.PARMER_02813 4.31e-44 143.0 COG0236@1|root,COG0236@2|Bacteria,4NS6C@976|Bacteroidetes,2FTWG@200643|Bacteroidia,22YF4@171551|Porphyromonadaceae 976|Bacteroidetes IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis acpP GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - ko:K02078 - - - - ko00000,ko00001 - - - PP-binding PHJFGMMN_00727 411477.PARMER_02814 5.59e-134 379.0 COG0299@1|root,COG0299@2|Bacteria,4NNZP@976|Bacteroidetes,2FPNN@200643|Bacteroidia,22XY4@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate purN - 2.1.2.2 ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 M00048 R04325,R04326 RC00026,RC00197,RC01128 ko00000,ko00001,ko00002,ko01000 - - - Formyl_trans_N PHJFGMMN_00728 411477.PARMER_02816 0.0 1782.0 COG1629@1|root,COG4771@2|Bacteria,4PMUZ@976|Bacteroidetes,2FMM0@200643|Bacteroidia,22ZTD@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_00729 411477.PARMER_02817 1.29e-271 744.0 2EZVJ@1|root,33T03@2|Bacteria,4NZUJ@976|Bacteroidetes,2FQB0@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4925) - - - - - - - - - - - - DUF4925 PHJFGMMN_00730 411477.PARMER_02818 5.82e-203 562.0 COG2169@1|root,COG2169@2|Bacteria,4P21T@976|Bacteroidetes,2FR6F@200643|Bacteroidia,231H2@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - HTH_18 PHJFGMMN_00731 411477.PARMER_02819 1.92e-282 772.0 COG0477@1|root,COG2814@2|Bacteria,4NE7F@976|Bacteroidetes,2FQAA@200643|Bacteroidia,22VYY@171551|Porphyromonadaceae 976|Bacteroidetes EGP Major Facilitator Superfamily - - - - - - - - - - - - MFS_1,MFS_1_like,Sugar_tr PHJFGMMN_00732 411477.PARMER_02820 2.9e-276 754.0 COG0111@1|root,COG0111@2|Bacteria,4NGEB@976|Bacteroidetes,2FMMV@200643|Bacteroidia,22X0T@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate pdxB - 1.1.1.290 ko:K03473 ko00750,ko01100,map00750,map01100 M00124 R04210 RC00084 ko00000,ko00001,ko00002,ko01000 - - - 2-Hacid_dh,2-Hacid_dh_C,DUF3410 PHJFGMMN_00733 411477.PARMER_02821 1.16e-209 578.0 2EZ6Z@1|root,33SCY@2|Bacteria,4P10J@976|Bacteroidetes,2FNYE@200643|Bacteroidia 976|Bacteroidetes S COG NOG24904 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_00735 411477.PARMER_02823 0.0 1670.0 COG1629@1|root,COG1629@2|Bacteria,4NF6X@976|Bacteroidetes,2FPI0@200643|Bacteroidia,22WGP@171551|Porphyromonadaceae 976|Bacteroidetes P Psort location OuterMembrane, score - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg PHJFGMMN_00736 411477.PARMER_02824 8.5e-208 574.0 2E380@1|root,32Y7Q@2|Bacteria,4NN04@976|Bacteroidetes,2FM58@200643|Bacteroidia,22YHN@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (Porph_ging) - - - - - - - - - - - - Porph_ging PHJFGMMN_00737 411477.PARMER_02825 8.14e-73 218.0 COG2361@1|root,COG2361@2|Bacteria,4NZQ7@976|Bacteroidetes,2FV50@200643|Bacteroidia 976|Bacteroidetes S Protein of unknown function DUF86 - - - - - - - - - - - - DUF86 PHJFGMMN_00739 411477.PARMER_02826 8.98e-48 154.0 COG1669@1|root,COG1669@2|Bacteria 2|Bacteria S nucleotidyltransferase activity - - - ko:K07075 - - - - ko00000 - - - NTP_transf_2 PHJFGMMN_00740 411477.PARMER_02827 0.0 2488.0 COG3250@1|root,COG3250@2|Bacteria,4NE7H@976|Bacteroidetes,2FNT8@200643|Bacteroidia,22WE2@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 2 family - - - - - - - - - - - - F5_F8_type_C,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N PHJFGMMN_00741 411477.PARMER_02829 0.0 915.0 COG0642@1|root,COG2205@2|Bacteria,4NJKX@976|Bacteroidetes,2FPF2@200643|Bacteroidia,22WU9@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - 2.7.13.3 ko:K07636 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c PHJFGMMN_00742 411477.PARMER_02830 4.84e-160 448.0 COG0745@1|root,COG0745@2|Bacteria,4NKVJ@976|Bacteroidetes,2FNYS@200643|Bacteroidia,22XHK@171551|Porphyromonadaceae 976|Bacteroidetes KT Transcriptional regulatory protein, C terminal - - - - - - - - - - - - Response_reg,Trans_reg_C PHJFGMMN_00743 411477.PARMER_02831 5.54e-144 405.0 COG0463@1|root,COG0463@2|Bacteria,4NGJK@976|Bacteroidetes,2FM49@200643|Bacteroidia,22X83@171551|Porphyromonadaceae 976|Bacteroidetes M Protein of unknown function (DUF4254) - - - - - - - - - - - - DUF4254 PHJFGMMN_00744 411477.PARMER_02832 6.03e-248 680.0 COG0859@1|root,COG0859@2|Bacteria,4NEPH@976|Bacteroidetes,2FMP7@200643|Bacteroidia,22XC7@171551|Porphyromonadaceae 976|Bacteroidetes M glycosyl transferase family - - - ko:K02843 ko00540,ko01100,map00540,map01100 M00080 - - ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT9 - Glyco_transf_9 PHJFGMMN_00745 411477.PARMER_02833 2.02e-245 674.0 COG0438@1|root,COG0438@2|Bacteria,4NF89@976|Bacteroidetes,2FMFR@200643|Bacteroidia,22XFI@171551|Porphyromonadaceae 976|Bacteroidetes M transferase activity, transferring glycosyl groups - - - - - - - - - - - - - PHJFGMMN_00746 411477.PARMER_02834 1.06e-229 631.0 COG0515@1|root,COG0515@2|Bacteria,4PMF4@976|Bacteroidetes,2G0DX@200643|Bacteroidia,23244@171551|Porphyromonadaceae 976|Bacteroidetes KLT Lipopolysaccharide kinase (Kdo/WaaP) family - - - - - - - - - - - - Glycos_transf_2,Kdo PHJFGMMN_00747 411477.PARMER_02835 6.67e-190 526.0 COG1216@1|root,COG1216@2|Bacteria,4NRTB@976|Bacteroidetes 976|Bacteroidetes S Glycosyl transferase, family 2 - - - - - - - - - - - - - PHJFGMMN_00748 411477.PARMER_02836 3.72e-192 532.0 28JAC@1|root,2Z956@2|Bacteria,4NPKM@976|Bacteroidetes,2FSIK@200643|Bacteroidia,22XWZ@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00749 411477.PARMER_02838 5.71e-175 486.0 COG3774@1|root,COG3774@2|Bacteria,4NSMR@976|Bacteroidetes,2FR41@200643|Bacteroidia,231F2@171551|Porphyromonadaceae 976|Bacteroidetes M Capsular polysaccharide synthesis protein - - - - - - - - - - - - Gly_transf_sug PHJFGMMN_00750 411477.PARMER_02839 0.0 870.0 COG0677@1|root,COG0677@2|Bacteria,4NDTW@976|Bacteroidetes,2FMXE@200643|Bacteroidia,22W6E@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - 1.1.1.136 ko:K02474,ko:K13015 ko00520,map00520 - R00421,R06894 RC00291 ko00000,ko00001,ko01000,ko01005 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N PHJFGMMN_00751 411477.PARMER_02840 2.25e-157 440.0 COG0328@1|root,COG3341@1|root,COG0328@2|Bacteria,COG3341@2|Bacteria,4NI01@976|Bacteroidetes,2FMEU@200643|Bacteroidia,22XM6@171551|Porphyromonadaceae 976|Bacteroidetes L Ribonuclease H rnhA - 3.1.26.4 ko:K03469 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - Cauli_VI,RNase_H PHJFGMMN_00752 411477.PARMER_02842 3.18e-118 338.0 COG0703@1|root,COG0703@2|Bacteria,4NQ73@976|Bacteroidetes,2FM3K@200643|Bacteroidia,22Y40@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate aroK GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 ko:K00891 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02412 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - SKI PHJFGMMN_00753 411477.PARMER_02843 9.92e-285 778.0 COG0686@1|root,COG0686@2|Bacteria,4NE8F@976|Bacteroidetes,2FP71@200643|Bacteroidia,22XBI@171551|Porphyromonadaceae 976|Bacteroidetes E Alanine dehydrogenase/PNT, N-terminal domain ald - 1.4.1.1 ko:K00259 ko00250,ko00430,ko01100,map00250,map00430,map01100 - R00396 RC00008 ko00000,ko00001,ko01000 - - - AlaDh_PNT_C,AlaDh_PNT_N PHJFGMMN_00754 411477.PARMER_02844 0.0 1226.0 COG0674@1|root,COG1014@1|root,COG0674@2|Bacteria,COG1014@2|Bacteria,4NEP3@976|Bacteroidetes,2FN08@200643|Bacteroidia,22WBU@171551|Porphyromonadaceae 976|Bacteroidetes C 2-oxoacid acceptor oxidoreductase, alpha subunit porA - 1.2.7.11,1.2.7.3 ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - PFOR_II,POR,POR_N PHJFGMMN_00755 411477.PARMER_02845 1.18e-252 692.0 COG1013@1|root,COG1013@2|Bacteria,4NIE0@976|Bacteroidetes,2FME7@200643|Bacteroidia,22VVU@171551|Porphyromonadaceae 976|Bacteroidetes C ferredoxin oxidoreductase subunit beta oorB - 1.2.7.11,1.2.7.3 ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C PHJFGMMN_00756 411477.PARMER_02846 4.31e-76 227.0 COG1669@1|root,COG1669@2|Bacteria,4NXGR@976|Bacteroidetes,2FV7W@200643|Bacteroidia,230WQ@171551|Porphyromonadaceae 976|Bacteroidetes S Nucleotidyltransferase domain - - - ko:K07075 - - - - ko00000 - - - NTP_transf_2 PHJFGMMN_00757 999419.HMPREF1077_01449 1.13e-17 78.6 COG2361@1|root,COG2361@2|Bacteria,4NZQ7@976|Bacteroidetes,2FV50@200643|Bacteroidia 976|Bacteroidetes S Protein of unknown function DUF86 - - - - - - - - - - - - DUF86 PHJFGMMN_00759 411477.PARMER_02849 0.0 1083.0 COG1866@1|root,COG1866@2|Bacteria,4NEGI@976|Bacteroidetes,2FNYK@200643|Bacteroidia,22VYR@171551|Porphyromonadaceae 976|Bacteroidetes H Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA pckA GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 M00003,M00170 R00341 RC00002,RC02741 ko00000,ko00001,ko00002,ko01000 - - - PEPCK_ATP PHJFGMMN_00760 411477.PARMER_02850 8.89e-269 736.0 COG0526@1|root,COG0526@2|Bacteria,4NRAI@976|Bacteroidetes,2FSX6@200643|Bacteroidia,22YDF@171551|Porphyromonadaceae 976|Bacteroidetes CO Domain of unknown function (DUF4369) - - - - - - - - - - - - AhpC-TSA,DUF4369,Thioredoxin_8 PHJFGMMN_00761 411477.PARMER_02851 0.0 990.0 COG0606@1|root,COG0606@2|Bacteria,4NE0G@976|Bacteroidetes,2FMHE@200643|Bacteroidia,22W0Y@171551|Porphyromonadaceae 976|Bacteroidetes O magnesium chelatase comM - - ko:K07391 - - - - ko00000 - - - ChlI,Mg_chelatase,Mg_chelatase_C PHJFGMMN_00762 411477.PARMER_02854 7.86e-145 409.0 COG0776@1|root,COG0776@2|Bacteria,4P6DN@976|Bacteroidetes,2FRK1@200643|Bacteroidia 976|Bacteroidetes L DNA-binding protein - - - - - - - - - - - - Bac_DNA_binding PHJFGMMN_00763 411477.PARMER_02855 8.81e-204 563.0 COG2207@1|root,COG2207@2|Bacteria,4NKDR@976|Bacteroidetes,2FP0U@200643|Bacteroidia,22Y8B@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - AraC_binding,HTH_18 PHJFGMMN_00764 411477.PARMER_02856 0.0 1761.0 2DUDX@1|root,33Q5F@2|Bacteria,4P077@976|Bacteroidetes,2FQ17@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4493) - - - - - - - - - - - - DUF4493,PCMD PHJFGMMN_00766 411477.PARMER_02858 4.16e-314 856.0 2DMQ7@1|root,32SZ7@2|Bacteria,4NUCN@976|Bacteroidetes,2FUBQ@200643|Bacteroidia,230TG@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4493) - - - - - - - - - - - - DUF4493 PHJFGMMN_00767 411477.PARMER_02859 0.0 1437.0 2AGHM@1|root,316Q7@2|Bacteria,4NS0B@976|Bacteroidetes,2FP8S@200643|Bacteroidia,231HR@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4493) - - - - - - - - - - - - DUF4493,PCMD PHJFGMMN_00768 411477.PARMER_02860 4.29e-172 480.0 COG3170@1|root,COG3170@2|Bacteria,4NMEM@976|Bacteroidetes,2FQ49@200643|Bacteroidia,23080@171551|Porphyromonadaceae 976|Bacteroidetes NU Tfp pilus assembly protein FimV - - - - - - - - - - - - - PHJFGMMN_00769 411477.PARMER_02861 0.0 1095.0 2DBVW@1|root,2ZBDE@2|Bacteria,4NIA9@976|Bacteroidetes,2FPE2@200643|Bacteroidia,22XM3@171551|Porphyromonadaceae 976|Bacteroidetes S Putative carbohydrate metabolism domain - - - - - - - - - - - - PCMD PHJFGMMN_00770 411477.PARMER_02862 1.66e-61 189.0 COG1669@1|root,COG1669@2|Bacteria 2|Bacteria S nucleotidyltransferase activity - - - ko:K07075 - - - - ko00000 - - - NTP_transf_2 PHJFGMMN_00771 411477.PARMER_02863 4.35e-86 253.0 COG2361@1|root,COG2361@2|Bacteria 2|Bacteria S Protein of unknown function DUF86 - - - - - - - - - - - - DUF86 PHJFGMMN_00772 411477.PARMER_02864 0.0 2496.0 COG2247@1|root,COG2247@2|Bacteria,4NU8E@976|Bacteroidetes,2FU3C@200643|Bacteroidia,230P8@171551|Porphyromonadaceae 976|Bacteroidetes M Listeria-Bacteroides repeat domain (List_Bact_rpt) - - - - - - - - - - - - Flg_new PHJFGMMN_00773 411477.PARMER_02865 0.0 1383.0 COG0073@1|root,COG0143@1|root,COG0073@2|Bacteria,COG0143@2|Bacteria,4NECB@976|Bacteroidetes,2FNV6@200643|Bacteroidia,22WAM@171551|Porphyromonadaceae 976|Bacteroidetes J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation metG - 6.1.1.10 ko:K01874 ko00450,ko00970,map00450,map00970 M00359,M00360 R03659,R04773 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,tRNA-synt_1g,tRNA_bind PHJFGMMN_00774 411477.PARMER_02866 2.43e-284 776.0 COG0399@1|root,COG0399@2|Bacteria,4NEBI@976|Bacteroidetes,2FPAJ@200643|Bacteroidia,22WTH@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the DegT DnrJ EryC1 family degT - - - - - - - - - - - DegT_DnrJ_EryC1 PHJFGMMN_00775 411477.PARMER_02867 1.48e-254 697.0 COG0673@1|root,COG0673@2|Bacteria,4NFY3@976|Bacteroidetes,2FR8Q@200643|Bacteroidia,22XGS@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase, NAD-binding domain protein - - 1.1.1.335 ko:K13016 ko00520,map00520 - R10140 RC00182 ko00000,ko00001,ko01000,ko01005 - - - GFO_IDH_MocA,GFO_IDH_MocA_C PHJFGMMN_00776 411477.PARMER_02868 1.62e-105 305.0 COG1522@1|root,COG1522@2|Bacteria,4NNH2@976|Bacteroidetes,2FS1F@200643|Bacteroidia,22XNH@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix ASNC type lrp - - ko:K03719,ko:K05800 - - - - ko00000,ko03000,ko03036 - - - AsnC_trans_reg,HTH_24 PHJFGMMN_00777 411477.PARMER_02869 8.96e-310 844.0 COG2873@1|root,COG2873@2|Bacteria,4NE27@976|Bacteroidetes,2FMQX@200643|Bacteroidia,22WIS@171551|Porphyromonadaceae 976|Bacteroidetes E O-acetylhomoserine aminocarboxypropyltransferase metY - 2.5.1.49 ko:K01740 ko00270,ko01100,map00270,map01100 - R01287,R04859 RC00020,RC02821,RC02848 ko00000,ko00001,ko01000 - - - Cys_Met_Meta_PP PHJFGMMN_00778 411477.PARMER_02870 1.23e-226 623.0 29C0C@1|root,2ZYYV@2|Bacteria,4NPGV@976|Bacteroidetes 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00779 411477.PARMER_02871 2.41e-141 399.0 COG0330@1|root,COG0330@2|Bacteria,4NH8V@976|Bacteroidetes,2FQPC@200643|Bacteroidia,22Z0Q@171551|Porphyromonadaceae 976|Bacteroidetes O SPFH Band 7 PHB domain protein - - - - - - - - - - - - Band_7 PHJFGMMN_00780 411477.PARMER_02872 2.9e-56 175.0 COG0330@1|root,COG0330@2|Bacteria 2|Bacteria O stress-induced mitochondrial fusion hflC GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0031224,GO:0031226,GO:0031233,GO:0032991,GO:0043086,GO:0043170,GO:0044092,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0098796,GO:0140096,GO:1901564 - ko:K04087 - M00742 - - ko00000,ko00002,ko01000 - - - Band_7 PHJFGMMN_00781 411477.PARMER_02873 1.15e-82 244.0 COG1725@1|root,COG1725@2|Bacteria,4PKHR@976|Bacteroidetes,2G09Z@200643|Bacteroidia,2313V@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix gluconate operon transcriptional repressor - - - - - - - - - - - - GntR,Peripla_BP_3 PHJFGMMN_00782 411477.PARMER_00713 5.02e-84 247.0 COG2963@1|root,COG2963@2|Bacteria,4P67R@976|Bacteroidetes,2FSQH@200643|Bacteroidia,231AJ@171551|Porphyromonadaceae 976|Bacteroidetes L transposase activity - - - ko:K07497 - - - - ko00000 - - - - PHJFGMMN_00783 411477.PARMER_00664 3.62e-88 258.0 COG3436@1|root,COG3436@2|Bacteria,4NV0F@976|Bacteroidetes,2FSTJ@200643|Bacteroidia,230PF@171551|Porphyromonadaceae 976|Bacteroidetes L PFAM IS66 Orf2 like protein - - - ko:K07484 - - - - ko00000 - - - TnpB_IS66 PHJFGMMN_00784 411477.PARMER_02876 0.0 1025.0 COG4974@1|root,COG4974@2|Bacteria,4NEK2@976|Bacteroidetes,2FMJC@200643|Bacteroidia,22YQB@171551|Porphyromonadaceae 976|Bacteroidetes L COG3436 Transposase and inactivated derivatives - - - - - - - - - - - - DDE_Tnp_IS66,DDE_Tnp_IS66_C,LZ_Tnp_IS66 PHJFGMMN_00785 411477.PARMER_01148 1.28e-296 809.0 COG3328@1|root,COG3328@2|Bacteria,4NFQS@976|Bacteroidetes,2FM5A@200643|Bacteroidia,22YJ0@171551|Porphyromonadaceae 976|Bacteroidetes L COG COG3328 Transposase and inactivated derivatives - - - - - - - - - - - - Transposase_mut PHJFGMMN_00787 411477.PARMER_00526 0.0 2545.0 COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,2FM2N@200643|Bacteroidia,22WMC@171551|Porphyromonadaceae 976|Bacteroidetes T helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y PHJFGMMN_00788 411477.PARMER_00527 0.0 1030.0 COG5434@1|root,COG5434@2|Bacteria,4NTBW@976|Bacteroidetes,2G2Q6@200643|Bacteroidia 976|Bacteroidetes M Right handed beta helix region - - - - - - - - - - - - Beta_helix PHJFGMMN_00789 411477.PARMER_00528 0.0 1163.0 COG1435@1|root,COG1435@2|Bacteria,4NE0A@976|Bacteroidetes,2FM03@200643|Bacteroidia,22WUB@171551|Porphyromonadaceae 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_00790 411477.PARMER_00529 0.0 1843.0 COG1629@1|root,COG4771@2|Bacteria,4NFFW@976|Bacteroidetes,2FMGS@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - Plug,TonB_dep_Rec PHJFGMMN_00791 411477.PARMER_00530 0.0 1274.0 COG1435@1|root,COG1435@2|Bacteria,4P1ZS@976|Bacteroidetes,2G099@200643|Bacteroidia 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_00792 411477.PARMER_00531 0.0 2120.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FWW6@200643|Bacteroidia,22W8X@171551|Porphyromonadaceae 976|Bacteroidetes H CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug PHJFGMMN_00795 411477.PARMER_00534 0.0 1380.0 COG0475@1|root,COG0490@1|root,COG0475@2|Bacteria,COG0490@2|Bacteria,4NGF6@976|Bacteroidetes,2FNTX@200643|Bacteroidia,22WU6@171551|Porphyromonadaceae 976|Bacteroidetes P COG0475 Kef-type K transport systems, membrane components - - - ko:K03455 - - - - ko00000 2.A.37 - - Na_H_Exchanger,TrkA_C PHJFGMMN_00796 411477.PARMER_00536 3.66e-98 285.0 COG3015@1|root,COG3015@2|Bacteria,4NU1I@976|Bacteroidetes,2FT4X@200643|Bacteroidia,230KN@171551|Porphyromonadaceae 976|Bacteroidetes MP NlpE N-terminal domain - - - - - - - - - - - - NlpE PHJFGMMN_00798 411477.PARMER_00539 1.44e-257 708.0 COG0628@1|root,COG0628@2|Bacteria,4NFHZ@976|Bacteroidetes,2FN2B@200643|Bacteroidia,22X4Y@171551|Porphyromonadaceae 976|Bacteroidetes S Permease - - - - - - - - - - - - AI-2E_transport PHJFGMMN_00799 411477.PARMER_00540 0.0 958.0 COG2027@1|root,COG2027@2|Bacteria,4NGIQ@976|Bacteroidetes,2FM0Y@200643|Bacteroidia,22WU4@171551|Porphyromonadaceae 976|Bacteroidetes M D-alanyl-D-alanine carboxypeptidase dacB - 3.4.16.4 ko:K07259 ko00550,map00550 - - - ko00000,ko00001,ko01000,ko01002,ko01011 - - - Peptidase_S13 PHJFGMMN_00800 411477.PARMER_00541 3.96e-164 459.0 COG3279@1|root,COG3279@2|Bacteria,4NI3K@976|Bacteroidetes,2FMT1@200643|Bacteroidia,22WEI@171551|Porphyromonadaceae 976|Bacteroidetes KT LytTr DNA-binding domain yehT_1 - - - - - - - - - - - LytTR,Response_reg PHJFGMMN_00801 411477.PARMER_00542 8.21e-251 688.0 COG2972@1|root,COG2972@2|Bacteria,4NGQZ@976|Bacteroidetes,2FMGN@200643|Bacteroidia,22WQN@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase cheA - - - - - - - - - - - HATPase_c_5,His_kinase PHJFGMMN_00802 411477.PARMER_00544 3.17e-280 767.0 COG0577@1|root,COG0577@2|Bacteria,4NEBD@976|Bacteroidetes,2FM6F@200643|Bacteroidia,22WK8@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD PHJFGMMN_00803 411477.PARMER_00546 1.89e-171 479.0 COG1136@1|root,COG1136@2|Bacteria,4NE5N@976|Bacteroidetes,2FPB3@200643|Bacteroidia,22VYF@171551|Porphyromonadaceae 976|Bacteroidetes V ATPases associated with a variety of cellular activities - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran PHJFGMMN_00804 411477.PARMER_00547 7.65e-272 748.0 COG0845@1|root,COG0845@2|Bacteria,4NFT4@976|Bacteroidetes,2FN2G@200643|Bacteroidia,22W7Z@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005 - - - - ko00000 - - - HlyD_D23 PHJFGMMN_00805 411477.PARMER_00548 3.93e-306 837.0 COG1538@1|root,COG1538@2|Bacteria,4NEEN@976|Bacteroidetes,2FM5G@200643|Bacteroidia,22XC6@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 - - OEP PHJFGMMN_00806 411477.PARMER_00549 1.88e-124 355.0 COG2059@1|root,COG2059@2|Bacteria,4NNF5@976|Bacteroidetes,2FP4K@200643|Bacteroidia,22XY1@171551|Porphyromonadaceae 976|Bacteroidetes P Chromate transporter - - - ko:K07240 - - - - ko00000,ko02000 2.A.51.1 - - Chromate_transp PHJFGMMN_00807 411477.PARMER_00550 2.92e-120 343.0 COG2059@1|root,COG2059@2|Bacteria,4NNZ1@976|Bacteroidetes,2FPBG@200643|Bacteroidia,22XYA@171551|Porphyromonadaceae 976|Bacteroidetes P Chromate transporter - - - ko:K07240 - - - - ko00000,ko02000 2.A.51.1 - - Chromate_transp PHJFGMMN_00808 411477.PARMER_00551 2.42e-63 193.0 COG3041@1|root,COG3041@2|Bacteria,4NUUP@976|Bacteroidetes,2FVFC@200643|Bacteroidia 976|Bacteroidetes S Bacterial toxin of type II toxin-antitoxin system, YafQ yafQ2 - - ko:K19157 - - - - ko00000,ko01000,ko02048 - - - YafQ_toxin PHJFGMMN_00810 411477.PARMER_00553 0.0 1033.0 COG0793@1|root,COG0793@2|Bacteria,4NEGV@976|Bacteroidetes,2FN98@200643|Bacteroidia,22WA5@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the peptidase S41A family ctpA - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - PDZ_2,Peptidase_S41 PHJFGMMN_00811 411477.PARMER_00554 8.06e-123 350.0 COG0669@1|root,COG0669@2|Bacteria,4NM84@976|Bacteroidetes,2FT6A@200643|Bacteroidia,22Y2B@171551|Porphyromonadaceae 976|Bacteroidetes H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate coaD - 2.7.7.3 ko:K00954 ko00770,ko01100,map00770,map01100 M00120 R03035 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_like PHJFGMMN_00812 411477.PARMER_00555 0.0 1218.0 COG0187@1|root,COG0187@2|Bacteria,4NF18@976|Bacteroidetes,2FMMD@200643|Bacteroidia,22VXW@171551|Porphyromonadaceae 976|Bacteroidetes L DNA topoisomerase (ATP-hydrolyzing) parE - - ko:K02622 - - - - ko00000,ko01000,ko02048,ko03032,ko03036 - - - DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim PHJFGMMN_00813 411477.PARMER_00556 7.76e-281 766.0 COG0454@1|root,COG0456@2|Bacteria,4NFWE@976|Bacteroidetes,2FNG4@200643|Bacteroidia,22WRZ@171551|Porphyromonadaceae 976|Bacteroidetes K Psort location Cytoplasmic, score 8.96 yghO - - - - - - - - - - - Acetyltransf_1 PHJFGMMN_00814 411477.PARMER_00557 0.0 865.0 COG1004@1|root,COG1004@2|Bacteria,4NE00@976|Bacteroidetes,2FMZ9@200643|Bacteroidia,22WMK@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the UDP-glucose GDP-mannose dehydrogenase family ugd - 1.1.1.22 ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 M00014,M00129,M00361,M00362 R00286 RC00291 ko00000,ko00001,ko00002,ko01000 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N PHJFGMMN_00815 999419.HMPREF1077_01411 1.59e-10 58.5 COG1708@1|root,COG1708@2|Bacteria,4NUA1@976|Bacteroidetes,2FUCM@200643|Bacteroidia,22YPU@171551|Porphyromonadaceae 976|Bacteroidetes L Nucleotidyltransferase domain - - - - - - - - - - - - NTP_transf_2 PHJFGMMN_00816 411477.PARMER_00559 0.0 912.0 COG2244@1|root,COG2244@2|Bacteria,4NFKD@976|Bacteroidetes,2FNDA@200643|Bacteroidia,22WCM@171551|Porphyromonadaceae 976|Bacteroidetes S Polysaccharide biosynthesis protein - - - - - - - - - - - - Polysacc_synt_3,Polysacc_synt_C PHJFGMMN_00818 411477.PARMER_00562 5.12e-107 311.0 COG0110@1|root,COG0110@2|Bacteria,4NTZI@976|Bacteroidetes,2FUAU@200643|Bacteroidia 976|Bacteroidetes S Bacterial transferase hexapeptide (six repeats) - - 2.3.1.28 ko:K00638 - - - - br01600,ko00000,ko01000,ko01504 - - - Hexapep PHJFGMMN_00819 411477.PARMER_00563 3.36e-271 744.0 COG0381@1|root,COG0381@2|Bacteria,4NGBD@976|Bacteroidetes,2FM5D@200643|Bacteroidia,22W64@171551|Porphyromonadaceae 976|Bacteroidetes G UDP-N-acetylglucosamine 2-epimerase epsC - 5.1.3.14 ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 M00362 R00420 RC00290 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Epimerase_2 PHJFGMMN_00820 411477.PARMER_00564 5.71e-157 447.0 COG0438@1|root,COG0438@2|Bacteria,4P2DZ@976|Bacteroidetes 976|Bacteroidetes M transferase activity, transferring glycosyl groups - - - - - - - - - - - - - PHJFGMMN_00821 411477.PARMER_00566 3.21e-244 670.0 COG4641@1|root,COG4641@2|Bacteria 2|Bacteria M Protein conserved in bacteria cpsH GO:0000271,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0046401,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - ko:K06320,ko:K12986 - - - - ko00000,ko01000,ko01003,ko01005 - GT8 - DUF3880,Glyco_trans_1_2 PHJFGMMN_00822 411477.PARMER_00567 1.93e-204 565.0 arCOG09486@1|root,2ZC3Y@2|Bacteria,4NNUF@976|Bacteroidetes,2FP8A@200643|Bacteroidia,230J0@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl transferase family 11 - - - - - - - - - - - - Glyco_transf_11 PHJFGMMN_00823 411477.PARMER_00568 2.37e-311 848.0 COG0677@1|root,COG0677@2|Bacteria,4NDTW@976|Bacteroidetes,2FMXE@200643|Bacteroidia,22W6E@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - 1.1.1.136 ko:K02474,ko:K13015 ko00520,map00520 - R00421,R06894 RC00291 ko00000,ko00001,ko01000,ko01005 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N PHJFGMMN_00824 411477.PARMER_00569 2.12e-225 620.0 COG1216@1|root,COG1216@2|Bacteria,4NJWR@976|Bacteroidetes,2G3FK@200643|Bacteroidia,22XRB@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 PHJFGMMN_00825 411477.PARMER_00570 4.76e-249 681.0 COG1442@1|root,COG1442@2|Bacteria,4NGMZ@976|Bacteroidetes,2FRP1@200643|Bacteroidia 976|Bacteroidetes M glycosyl transferase family 8 - - - - - - - - - - - - - PHJFGMMN_00826 411477.PARMER_00571 5.79e-89 260.0 COG1898@1|root,COG1898@2|Bacteria,4PKN3@976|Bacteroidetes,2G0GR@200643|Bacteroidia,231PV@171551|Porphyromonadaceae 976|Bacteroidetes M WxcM-like, C-terminal - - - - - - - - - - - - FdtA PHJFGMMN_00827 411477.PARMER_00572 4.92e-267 730.0 COG0399@1|root,COG0399@2|Bacteria,4NEBI@976|Bacteroidetes,2FPAJ@200643|Bacteroidia,22WTH@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the DegT DnrJ EryC1 family eryC - - - - - - - - - - - DegT_DnrJ_EryC1 PHJFGMMN_00829 411477.PARMER_00574 6.22e-107 308.0 COG1705@1|root,COG1705@2|Bacteria,4NR3X@976|Bacteroidetes,2FY2U@200643|Bacteroidia 976|Bacteroidetes NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase - - - ko:K02395 - - - - ko00000,ko02035 - - - Glucosaminidase PHJFGMMN_00830 411477.PARMER_00575 2.79e-91 268.0 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation - - - - - - - - - - - - - PHJFGMMN_00831 411477.PARMER_00576 9.66e-51 160.0 298PA@1|root,2ZVTS@2|Bacteria,4P8K8@976|Bacteroidetes,2FUDY@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4248) - - - - - - - - - - - - DUF4248 PHJFGMMN_00834 411477.PARMER_00580 0.0 874.0 COG0305@1|root,COG0305@2|Bacteria,4NF8P@976|Bacteroidetes,2FNFH@200643|Bacteroidia,231UH@171551|Porphyromonadaceae 976|Bacteroidetes L DnaB-like helicase N terminal domain - - 3.6.4.12 ko:K02314 ko03030,ko04112,map03030,map04112 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB,DnaB_C PHJFGMMN_00835 411477.PARMER_00581 1.73e-306 835.0 COG0358@1|root,COG0358@2|Bacteria,4NENT@976|Bacteroidetes,2FMV1@200643|Bacteroidia,22WQI@171551|Porphyromonadaceae 976|Bacteroidetes L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication dnaG - - ko:K02316 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB_bind,Toprim_2,Toprim_4,Toprim_N,zf-CHC2 PHJFGMMN_00836 411477.PARMER_00582 3.05e-185 514.0 COG0463@1|root,COG0463@2|Bacteria,4PKFU@976|Bacteroidetes,2G3FQ@200643|Bacteroidia,231N7@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 PHJFGMMN_00837 411477.PARMER_00583 0.0 1631.0 COG4485@1|root,COG4485@2|Bacteria,4NEE5@976|Bacteroidetes,2FMKE@200643|Bacteroidia,22VZ1@171551|Porphyromonadaceae 976|Bacteroidetes S membrane - - - - - - - - - - - - YfhO PHJFGMMN_00838 411477.PARMER_00585 7.6e-246 674.0 COG1216@1|root,COG1216@2|Bacteria,4NFS6@976|Bacteroidetes,2FNNV@200643|Bacteroidia,22W6N@171551|Porphyromonadaceae 976|Bacteroidetes M glycosyl transferase family 2 - - - - - - - - - - - - Glyco_trans_2_3,Glycos_transf_2 PHJFGMMN_00839 411477.PARMER_00586 1.03e-194 538.0 COG2227@1|root,COG2227@2|Bacteria,4NJ5I@976|Bacteroidetes,2FPAS@200643|Bacteroidia,22W82@171551|Porphyromonadaceae 976|Bacteroidetes H Methyltransferase domain - - - - - - - - - - - - Methyltransf_11,Methyltransf_23,Methyltransf_25,Methyltransf_31 PHJFGMMN_00840 411477.PARMER_00587 0.0 927.0 COG0499@1|root,COG0499@2|Bacteria,4NEKE@976|Bacteroidetes,2FPWZ@200643|Bacteroidia,22W9Y@171551|Porphyromonadaceae 976|Bacteroidetes H May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine ahcY GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 ko:K01251 ko00270,ko01100,map00270,map01100 M00035 R00192,R04936 RC00056,RC00069,RC01161,RC01243 ko00000,ko00001,ko00002,ko01000,ko01009,ko04147 - - - AdoHcyase,AdoHcyase_NAD PHJFGMMN_00841 411477.PARMER_00588 0.0 1135.0 COG0318@1|root,COG0318@2|Bacteria,4NFPF@976|Bacteroidetes,2FMTR@200643|Bacteroidia,22W6H@171551|Porphyromonadaceae 976|Bacteroidetes IQ AMP-binding enzyme C-terminal domain - - - ko:K00666 - - - - ko00000,ko01000,ko01004 - - - AMP-binding,AMP-binding_C PHJFGMMN_00842 411477.PARMER_00589 3.87e-132 375.0 COG1396@1|root,COG1917@1|root,COG1396@2|Bacteria,COG1917@2|Bacteria,4NN23@976|Bacteroidetes,2FN1Y@200643|Bacteroidia,22XT7@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - Cupin_2,HTH_19,HTH_3 PHJFGMMN_00843 411477.PARMER_00590 1.38e-54 171.0 COG0184@1|root,COG0184@2|Bacteria,4NS7U@976|Bacteroidetes,2FTTZ@200643|Bacteroidia,22YD7@171551|Porphyromonadaceae 976|Bacteroidetes J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome rpsO GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02956 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S15 PHJFGMMN_00844 411477.PARMER_00591 0.0 1182.0 COG1217@1|root,COG1217@2|Bacteria,4NDVM@976|Bacteroidetes,2FMNU@200643|Bacteroidia,22WPR@171551|Porphyromonadaceae 976|Bacteroidetes T GTP-binding protein TypA typA - - ko:K06207 - - - - ko00000 - - - EFG_C,GTP_EFTU,GTP_EFTU_D2 PHJFGMMN_00845 411477.PARMER_00592 0.0 1109.0 COG4690@1|root,COG4690@2|Bacteria,4NEQE@976|Bacteroidetes,2FN3E@200643|Bacteroidia,22XFY@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family C69 - - - - - - - - - - - - Peptidase_C69 PHJFGMMN_00846 411477.PARMER_00593 1.62e-227 625.0 COG2207@1|root,COG2207@2|Bacteria,4NEGP@976|Bacteroidetes,2G0GS@200643|Bacteroidia,231YF@171551|Porphyromonadaceae 976|Bacteroidetes K AraC-like ligand binding domain - - - - - - - - - - - - AraC_binding,HTH_18 PHJFGMMN_00847 411477.PARMER_00594 0.0 2116.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_00848 411477.PARMER_00595 0.0 1271.0 COG0561@1|root,COG0561@2|Bacteria,4PMUN@976|Bacteroidetes,2G0GT@200643|Bacteroidia 976|Bacteroidetes S Pfam:SusD - - - - - - - - - - - - SusD-like_3,SusD_RagB PHJFGMMN_00849 411477.PARMER_00596 0.0 1113.0 28KYZ@1|root,347JM@2|Bacteria,4P5QT@976|Bacteroidetes,2FUBY@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00850 411477.PARMER_00597 0.0 984.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 PHJFGMMN_00851 411477.PARMER_00598 0.0 984.0 COG5434@1|root,COG5434@2|Bacteria,4NFSC@976|Bacteroidetes,2FNQN@200643|Bacteroidia,22Y8F@171551|Porphyromonadaceae 976|Bacteroidetes G Pectate lyase superfamily protein - - - - - - - - - - - - Glyco_hydro_28,Pectate_lyase_3 PHJFGMMN_00852 411477.PARMER_00599 1.19e-176 492.0 COG5434@1|root,COG5434@2|Bacteria,4NQX5@976|Bacteroidetes,2FXWX@200643|Bacteroidia 976|Bacteroidetes G Pectate lyase superfamily protein - - - - - - - - - - - - Glyco_hydro_28 PHJFGMMN_00853 411477.PARMER_00600 0.0 1996.0 COG3250@1|root,COG3250@2|Bacteria,4NGZH@976|Bacteroidetes,2FN7Y@200643|Bacteroidia,22XPZ@171551|Porphyromonadaceae 976|Bacteroidetes G alpha-L-rhamnosidase - - - - - - - - - - - - Glyco_hydro_106 PHJFGMMN_00854 411477.PARMER_00601 0.0 936.0 COG5434@1|root,COG5434@2|Bacteria,4NFSC@976|Bacteroidetes,2FNQN@200643|Bacteroidia,22Y8F@171551|Porphyromonadaceae 976|Bacteroidetes G Pectate lyase superfamily protein - - - - - - - - - - - - Glyco_hydro_28,Pectate_lyase_3 PHJFGMMN_00855 411477.PARMER_00604 0.0 1138.0 2DZRA@1|root,32VGT@2|Bacteria,4NW08@976|Bacteroidetes,2FWST@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00856 411477.PARMER_00605 0.0 1609.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMQ9@200643|Bacteroidia,22W3K@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 PHJFGMMN_00857 411477.PARMER_00607 0.0 978.0 COG3063@1|root,COG3063@2|Bacteria,4PKG6@976|Bacteroidetes,2G3G2@200643|Bacteroidia,2322F@171551|Porphyromonadaceae 976|Bacteroidetes NU Tetratricopeptide repeat protein - - - - - - - - - - - - TPR_16,TPR_2,TPR_8 PHJFGMMN_00858 411477.PARMER_00608 0.0 1123.0 COG5640@1|root,COG5640@2|Bacteria,4PKEW@976|Bacteroidetes,2FRKU@200643|Bacteroidia,231HM@171551|Porphyromonadaceae 976|Bacteroidetes O Trypsin-like peptidase domain - - 3.4.21.50 ko:K01337 - - - - ko00000,ko01000,ko01002 - - - Trypsin_2 PHJFGMMN_00859 411477.PARMER_00609 3.88e-97 283.0 COG3212@1|root,COG3212@2|Bacteria,4NQW5@976|Bacteroidetes,2FSR8@200643|Bacteroidia,22Y96@171551|Porphyromonadaceae 976|Bacteroidetes S Putative beta-lactamase-inhibitor-like, PepSY-like - - - - - - - - - - - - PepSY_like PHJFGMMN_00860 411477.PARMER_00610 3.74e-204 564.0 295Z7@1|root,2ZTA0@2|Bacteria,4NP7A@976|Bacteroidetes,2FPCX@200643|Bacteroidia,22YVA@171551|Porphyromonadaceae 976|Bacteroidetes S Putative beta-lactamase-inhibitor-like, PepSY-like - - - - - - - - - - - - PepSY_like PHJFGMMN_00861 411477.PARMER_00612 1.15e-131 372.0 COG0406@1|root,COG0406@2|Bacteria,4NQD3@976|Bacteroidetes,2FS51@200643|Bacteroidia,22XZ9@171551|Porphyromonadaceae 976|Bacteroidetes G phosphoglycerate mutase cobC - 3.1.3.73 ko:K02226 ko00860,ko01100,map00860,map01100 M00122 R04594,R11173 RC00017 ko00000,ko00001,ko00002,ko01000 - - - His_Phos_1 PHJFGMMN_00862 411477.PARMER_00613 3.81e-173 483.0 COG0368@1|root,COG0368@2|Bacteria,4NHNT@976|Bacteroidetes,2FNXF@200643|Bacteroidia,22XVT@171551|Porphyromonadaceae 976|Bacteroidetes H Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate cobS - 2.7.8.26 ko:K02233 ko00860,ko01100,map00860,map01100 M00122 R05223,R11174 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - CobS PHJFGMMN_00863 411477.PARMER_00614 6.09e-254 696.0 COG2038@1|root,COG2038@2|Bacteria,4NG1E@976|Bacteroidetes,2FMWI@200643|Bacteroidia,22WI9@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) cobT - 2.4.2.21 ko:K00768 ko00860,ko01100,map00860,map01100 M00122 R04148 RC00033,RC00063 ko00000,ko00001,ko00002,ko01000 - - - DBI_PRT PHJFGMMN_00864 411477.PARMER_00615 1.2e-121 347.0 COG2087@1|root,COG2087@2|Bacteria,4NMKE@976|Bacteroidetes,2FSA1@200643|Bacteroidia,22XKW@171551|Porphyromonadaceae 976|Bacteroidetes H cobinamide kinase cobU - 2.7.1.156,2.7.7.62 ko:K02231 ko00860,ko01100,map00860,map01100 M00122 R05221,R05222,R06558 RC00002,RC00428 ko00000,ko00001,ko00002,ko01000 - - - CobU PHJFGMMN_00865 411477.PARMER_00616 1.04e-126 362.0 COG1187@1|root,COG1187@2|Bacteria,4P7C7@976|Bacteroidetes,2FZBQ@200643|Bacteroidia,22Z0M@171551|Porphyromonadaceae 976|Bacteroidetes J S4 domain protein - - 5.4.99.21 ko:K06182 - - - - ko00000,ko01000,ko03009 - - - S4 PHJFGMMN_00866 411477.PARMER_00617 3.29e-221 610.0 COG1270@1|root,COG1270@2|Bacteria,4NH59@976|Bacteroidetes,2FPBS@200643|Bacteroidia,22WQQ@171551|Porphyromonadaceae 976|Bacteroidetes H Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group cobD - 6.3.1.10 ko:K02227 ko00860,ko01100,map00860,map01100 M00122 R06529,R07302 RC00090,RC00096 ko00000,ko00001,ko00002,ko01000 - - - CobD_Cbib PHJFGMMN_00867 411477.PARMER_00618 2.09e-303 828.0 COG0642@1|root,COG0642@2|Bacteria,4NEW4@976|Bacteroidetes,2FMVB@200643|Bacteroidia,22W83@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase qseC - - - - - - - - - - - HATPase_c,HisKA PHJFGMMN_00868 999419.HMPREF1077_01364 2.38e-160 450.0 COG0745@1|root,COG0745@2|Bacteria,4NGVV@976|Bacteroidetes,2FMSE@200643|Bacteroidia,22XFJ@171551|Porphyromonadaceae 976|Bacteroidetes T Transcriptional regulator - - - - - - - - - - - - Response_reg,Trans_reg_C PHJFGMMN_00870 411477.PARMER_00620 0.0 1115.0 COG1838@1|root,COG1951@1|root,COG1838@2|Bacteria,COG1951@2|Bacteria,4NE85@976|Bacteroidetes,2FNPE@200643|Bacteroidia,22WPF@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the reversible hydration of fumarate to (S)- malate fumB - 4.2.1.2 ko:K01676 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374 R01082 RC00443 ko00000,ko00001,ko00002,ko01000 - - - Fumerase,Fumerase_C PHJFGMMN_00871 411477.PARMER_00623 0.0 1410.0 COG1185@1|root,COG1185@2|Bacteria,4NE4Q@976|Bacteroidetes,2FN5H@200643|Bacteroidia,22W1K@171551|Porphyromonadaceae 976|Bacteroidetes J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction pnp - 2.7.7.8 ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 M00394 R00437,R00438,R00439,R00440 RC02795 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 - - - KH_1,PNPase,RNase_PH,RNase_PH_C,S1 PHJFGMMN_00872 999419.HMPREF1077_01359 2.98e-268 735.0 COG0526@1|root,COG0526@2|Bacteria,4P37Z@976|Bacteroidetes,2G3DY@200643|Bacteroidia,22WDB@171551|Porphyromonadaceae 976|Bacteroidetes CO Domain of unknown function (DUF4369) - - - - - - - - - - - - AhpC-TSA,DUF4369,Thioredoxin_8 PHJFGMMN_00873 411477.PARMER_00626 3.53e-100 291.0 COG0782@1|root,COG0782@2|Bacteria,4NNH6@976|Bacteroidetes,2FPFU@200643|Bacteroidia,22XVA@171551|Porphyromonadaceae 976|Bacteroidetes K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides greA - - ko:K03624 - - - - ko00000,ko03021 - - - GreA_GreB,GreA_GreB_N PHJFGMMN_00874 411477.PARMER_00627 2.57e-90 264.0 COG0537@1|root,COG0537@2|Bacteria,4NQ4X@976|Bacteroidetes,2FSRY@200643|Bacteroidia,22Y7E@171551|Porphyromonadaceae 976|Bacteroidetes FG HIT family hydrolase hinT - - ko:K02503 - - - - ko00000,ko04147 - - - HIT PHJFGMMN_00876 411477.PARMER_00628 9.71e-143 407.0 COG3595@1|root,COG3595@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DUF2807,DUF4097 PHJFGMMN_00877 411477.PARMER_00629 7.28e-246 677.0 COG1983@1|root,COG1983@2|Bacteria,4NG3T@976|Bacteroidetes,2FPZX@200643|Bacteroidia,22XZS@171551|Porphyromonadaceae 976|Bacteroidetes KT PspC domain - - - ko:K03973 - - - - ko00000,ko02048,ko03000 - - - DUF2807,PspC PHJFGMMN_00878 411477.PARMER_00630 1.34e-72 218.0 COG1695@1|root,COG1695@2|Bacteria,4NSI4@976|Bacteroidetes,2FTF6@200643|Bacteroidia,22Y5S@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator - - - ko:K10947 - - - - ko00000,ko03000 - - - PadR PHJFGMMN_00879 411477.PARMER_00631 0.0 1223.0 COG1022@1|root,COG1022@2|Bacteria,4NEA4@976|Bacteroidetes,2FNK9@200643|Bacteroidia,22WFS@171551|Porphyromonadaceae 976|Bacteroidetes I Long-chain fatty acid--CoA ligase fadD - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding PHJFGMMN_00880 411477.PARMER_00632 2.39e-228 629.0 COG1186@1|root,COG1186@2|Bacteria,4NEN1@976|Bacteroidetes,2FMZK@200643|Bacteroidia,22WHJ@171551|Porphyromonadaceae 976|Bacteroidetes J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA prfB - - ko:K02836 - - - - ko00000,ko03012 - - - PCRF,RF-1 PHJFGMMN_00883 411477.PARMER_00635 4.9e-138 390.0 COG0477@1|root,COG2814@2|Bacteria,4NG6X@976|Bacteroidetes,2FMDN@200643|Bacteroidia,22WNZ@171551|Porphyromonadaceae 976|Bacteroidetes EGP Sugar (and other) transporter bcr - - ko:K03446,ko:K07552 - M00701 - - ko00000,ko00002,ko02000 2.A.1.2,2.A.1.3 - - MFS_1 PHJFGMMN_00885 411477.PARMER_00637 6.56e-294 801.0 28PFH@1|root,2ZC6N@2|Bacteria,4NGVG@976|Bacteroidetes,2FWMP@200643|Bacteroidia,2303N@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4272) - - - - - - - - - - - - DUF4272 PHJFGMMN_00886 999419.HMPREF1077_01341 0.0 1338.0 COG1073@1|root,COG1073@2|Bacteria,4PKM0@976|Bacteroidetes,2G0GU@200643|Bacteroidia,2323S@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG10880 non supervised orthologous group - - - - - - - - - - - - Lipase_GDSL_2,Peptidase_S9 PHJFGMMN_00887 411477.PARMER_00639 0.0 941.0 COG2271@1|root,COG2271@2|Bacteria,4NE7R@976|Bacteroidetes,2FNZJ@200643|Bacteroidia,22WCH@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator Superfamily exuT - - ko:K08191 - - - - ko00000,ko02000 2.A.1.14.2 - - MFS_1 PHJFGMMN_00890 616991.JPOO01000003_gene1097 1.01e-34 122.0 2EBGV@1|root,335HF@2|Bacteria,4NV5E@976|Bacteroidetes,1I6Q2@117743|Flavobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00891 411477.PARMER_04256 0.0 1068.0 COG3119@1|root,COG3119@2|Bacteria,4NJ83@976|Bacteroidetes,2FM83@200643|Bacteroidia,22XH2@171551|Porphyromonadaceae 976|Bacteroidetes P Type I phosphodiesterase / nucleotide pyrophosphatase - - - - - - - - - - - - DUF4976,Sulfatase PHJFGMMN_00892 411477.PARMER_04255 4.78e-218 600.0 COG0657@1|root,COG0657@2|Bacteria,4NH62@976|Bacteroidetes,2FRBT@200643|Bacteroidia,22XBQ@171551|Porphyromonadaceae 976|Bacteroidetes I alpha/beta hydrolase fold - - - - - - - - - - - - Abhydrolase_3,Peptidase_S9 PHJFGMMN_00895 762968.HMPREF9441_03454 5.43e-17 75.9 28NYZ@1|root,2ZBW0@2|Bacteria,4P37G@976|Bacteroidetes,2FSME@200643|Bacteroidia 976|Bacteroidetes S Protein of unknown function (DUF3990) - - - - - - - - - - - - DUF3990 PHJFGMMN_00896 411477.PARMER_04248 8.64e-97 281.0 COG3328@1|root,COG3328@2|Bacteria,4NFQS@976|Bacteroidetes,2FM5A@200643|Bacteroidia 976|Bacteroidetes L COG3328 Transposase and inactivated derivatives - - - - - - - - - - - - Transposase_mut PHJFGMMN_00897 411477.PARMER_04245 3.45e-116 333.0 COG3039@1|root,COG3039@2|Bacteria,4NGW9@976|Bacteroidetes,2FQ99@200643|Bacteroidia,22WBT@171551|Porphyromonadaceae 976|Bacteroidetes L PFAM Transposase domain (DUF772) - - - - - - - - - - - - DDE_Tnp_1_2,DUF772 PHJFGMMN_00900 616991.JPOO01000003_gene1097 1.01e-34 122.0 2EBGV@1|root,335HF@2|Bacteria,4NV5E@976|Bacteroidetes,1I6Q2@117743|Flavobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00901 411477.PARMER_03121 3.6e-67 204.0 COG0393@1|root,COG0393@2|Bacteria,4NQGB@976|Bacteroidetes,2FT9V@200643|Bacteroidia,22YBW@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the UPF0145 family - - - - - - - - - - - - YbjQ_1 PHJFGMMN_00902 411477.PARMER_03122 0.0 1566.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMQ9@200643|Bacteroidia,22XIK@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 PHJFGMMN_00903 411477.PARMER_03124 4.44e-91 266.0 2BHVX@1|root,32BZS@2|Bacteria,4PFCD@976|Bacteroidetes,2G1IB@200643|Bacteroidia,2310R@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_00904 411477.PARMER_03125 2.96e-55 172.0 2EFF3@1|root,3397Y@2|Bacteria,4NVP1@976|Bacteroidetes,2FTU1@200643|Bacteroidia,22YUY@171551|Porphyromonadaceae 976|Bacteroidetes S Lysine exporter LysO - - - - - - - - - - - - Lys_export PHJFGMMN_00905 411477.PARMER_03126 3.7e-141 399.0 COG2431@1|root,COG2431@2|Bacteria,4NMM0@976|Bacteroidetes,2FNT2@200643|Bacteroidia,22XP9@171551|Porphyromonadaceae 976|Bacteroidetes S Lysine exporter LysO - - - - - - - - - - - - Lys_export PHJFGMMN_00906 411477.PARMER_03129 0.0 2127.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,4NGU2@976|Bacteroidetes,2FPGA@200643|Bacteroidia,22W33@171551|Porphyromonadaceae 976|Bacteroidetes M Tricorn protease homolog - - - - - - - - - - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ PHJFGMMN_00907 411477.PARMER_03130 9.61e-131 371.0 COG1595@1|root,COG1595@2|Bacteria,4P3YW@976|Bacteroidetes,2FTCS@200643|Bacteroidia,231PM@171551|Porphyromonadaceae 976|Bacteroidetes K ECF sigma factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_00908 411477.PARMER_03131 2.61e-235 647.0 COG3712@1|root,COG3712@2|Bacteria,4NH8I@976|Bacteroidetes,2FTRI@200643|Bacteroidia 976|Bacteroidetes PT Sigma factor regulatory protein, FecR PupR family - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_00909 411477.PARMER_03132 0.0 2224.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia,22XBF@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_00910 999419.HMPREF1077_00015 0.0 1183.0 COG0436@1|root,COG0436@2|Bacteria,4NEN3@976|Bacteroidetes,2FNFW@200643|Bacteroidia,22ZQW@171551|Porphyromonadaceae 976|Bacteroidetes E Starch-binding associating with outer membrane - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_00912 411477.PARMER_03138 0.0 2196.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,4NGU2@976|Bacteroidetes,2FPGA@200643|Bacteroidia,22XI5@171551|Porphyromonadaceae 976|Bacteroidetes M Tricorn protease homolog - - - ko:K08676 - - - - ko00000,ko01000,ko01002 - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ PHJFGMMN_00913 411477.PARMER_03139 9.87e-127 360.0 COG0847@1|root,COG0847@2|Bacteria,4NEQX@976|Bacteroidetes,2FQEU@200643|Bacteroidia,22Y8S@171551|Porphyromonadaceae 976|Bacteroidetes L DNA polymerase III - - 2.7.7.7 ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DUF5051,RNase_T PHJFGMMN_00914 411477.PARMER_03140 6.08e-245 677.0 COG1301@1|root,COG1301@2|Bacteria,4NE5X@976|Bacteroidetes,2FP3G@200643|Bacteroidia,22X00@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family sstT - - - - - - - - - - - SDF PHJFGMMN_00915 411477.PARMER_03141 0.0 913.0 COG1757@1|root,COG1757@2|Bacteria,4NFQT@976|Bacteroidetes,2FNIY@200643|Bacteroidia,22WAI@171551|Porphyromonadaceae 976|Bacteroidetes C Na+/H+ antiporter family nhaC - - ko:K03315 - - - - ko00000,ko02000 2.A.35 - - Na_H_antiporter PHJFGMMN_00916 411477.PARMER_03142 2.32e-169 472.0 COG0846@1|root,COG0846@2|Bacteria,4NE9Q@976|Bacteroidetes,2FNXN@200643|Bacteroidia,22VUN@171551|Porphyromonadaceae 976|Bacteroidetes K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form cobB - - ko:K12410 - - - - ko00000,ko01000 - - - SIR2 PHJFGMMN_00917 411477.PARMER_03143 0.0 1022.0 COG3538@1|root,COG3538@2|Bacteria,4NGY6@976|Bacteroidetes,2FM8H@200643|Bacteroidia,22VYN@171551|Porphyromonadaceae 976|Bacteroidetes S DUF1237 - - - ko:K09704 - - - - ko00000 - - - Glyco_hydro_125 PHJFGMMN_00918 999419.HMPREF1077_00023 8.98e-296 806.0 COG4833@1|root,COG4833@2|Bacteria,4NF5Z@976|Bacteroidetes,2FNXG@200643|Bacteroidia,22XJC@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 76 - - - - - - - - - - - - Glyco_hydro_76 PHJFGMMN_00919 411477.PARMER_03145 2.97e-136 385.0 COG0545@1|root,COG0545@2|Bacteria,4NDW4@976|Bacteroidetes,2FNCK@200643|Bacteroidia,22W5R@171551|Porphyromonadaceae 976|Bacteroidetes O Peptidyl-prolyl cis-trans isomerase - - 5.2.1.8 ko:K03772,ko:K03773 - - - - ko00000,ko01000,ko03110 - - - FKBP_C,FKBP_N PHJFGMMN_00920 411477.PARMER_03146 1.61e-165 463.0 COG0545@1|root,COG0545@2|Bacteria,4NDW4@976|Bacteroidetes,2G31Y@200643|Bacteroidia,22XYD@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidyl-prolyl cis-trans isomerase - - 5.2.1.8 ko:K03772,ko:K03773 - - - - ko00000,ko01000,ko03110 - - - FKBP_C,FKBP_N PHJFGMMN_00921 411477.PARMER_03147 4.68e-109 313.0 COG1522@1|root,COG1522@2|Bacteria,4NMEN@976|Bacteroidetes,2FMP2@200643|Bacteroidia,22XKX@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator asnC - - ko:K03718 - - - - ko00000,ko03000 - - - AsnC_trans_reg,HTH_24,HTH_AsnC-type PHJFGMMN_00922 411477.PARMER_03148 0.0 972.0 COG1404@1|root,COG1404@2|Bacteria,4NEIJ@976|Bacteroidetes,2FNT5@200643|Bacteroidia,22W7I@171551|Porphyromonadaceae 976|Bacteroidetes O Subtilase family aprN - - - - - - - - - - - Peptidase_S8 PHJFGMMN_00923 411477.PARMER_03149 2.02e-305 834.0 COG1570@1|root,COG1570@2|Bacteria,4NE64@976|Bacteroidetes,2FMMA@200643|Bacteroidia,22WD7@171551|Porphyromonadaceae 976|Bacteroidetes L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides xseA - 3.1.11.6 ko:K03601 ko03430,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - Exonuc_VII_L,tRNA_anti_2 PHJFGMMN_00924 411477.PARMER_03150 3.95e-33 114.0 COG1722@1|root,COG1722@2|Bacteria,4NXJV@976|Bacteroidetes,2FVH6@200643|Bacteroidia,22YWF@171551|Porphyromonadaceae 976|Bacteroidetes L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides xseB - 3.1.11.6 ko:K03602 ko03430,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - Exonuc_VII_S PHJFGMMN_00925 411477.PARMER_03151 3.17e-172 479.0 COG1211@1|root,COG1211@2|Bacteria,4NMB5@976|Bacteroidetes,2FM5H@200643|Bacteroidia,22XSS@171551|Porphyromonadaceae 976|Bacteroidetes I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) ispD GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 ko:K00991 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05633 RC00002 ko00000,ko00001,ko00002,ko01000 - - - IspD PHJFGMMN_00926 411477.PARMER_03152 0.0 1374.0 COG1200@1|root,COG1200@2|Bacteria,4NDZV@976|Bacteroidetes,2FNKB@200643|Bacteroidia,22WQP@171551|Porphyromonadaceae 976|Bacteroidetes L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) recG - 3.6.4.12 ko:K03655 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,RecG_wedge PHJFGMMN_00928 999419.HMPREF1077_00033 2.41e-279 766.0 COG0739@1|root,COG1388@1|root,COG0739@2|Bacteria,COG1388@2|Bacteria,4NGHH@976|Bacteroidetes,2FMHT@200643|Bacteroidia,22XCK@171551|Porphyromonadaceae 976|Bacteroidetes M peptidase mepM_1 - - - - - - - - - - - LysM,Peptidase_M23 PHJFGMMN_00929 411477.PARMER_03156 4.11e-129 367.0 28HFG@1|root,2Z7RJ@2|Bacteria,4NFNY@976|Bacteroidetes,2FKZK@200643|Bacteroidia,22X14@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of Unknown Function (DUF1599) - - - - - - - - - - - - DUF1599 PHJFGMMN_00930 411477.PARMER_03157 2.28e-310 845.0 COG2259@1|root,COG2259@2|Bacteria,4NGNF@976|Bacteroidetes,2G2Z3@200643|Bacteroidia,22W11@171551|Porphyromonadaceae 976|Bacteroidetes S DoxX family - - - - - - - - - - - - DoxX PHJFGMMN_00931 411477.PARMER_03158 5.03e-179 498.0 COG0149@1|root,COG0149@2|Bacteria,4NE2F@976|Bacteroidetes,2FNEK@200643|Bacteroidia,22VV8@171551|Porphyromonadaceae 976|Bacteroidetes G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) tpiA GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003 R01015 RC00423 ko00000,ko00001,ko00002,ko01000,ko04147 - - - TIM PHJFGMMN_00932 411477.PARMER_03159 1.6e-113 325.0 2E2TU@1|root,32XVZ@2|Bacteria,4NVA0@976|Bacteroidetes,2FUX1@200643|Bacteroidia,22YNI@171551|Porphyromonadaceae 976|Bacteroidetes S Sporulation related domain - - - - - - - - - - - - SPOR PHJFGMMN_00933 411477.PARMER_03160 3.09e-139 393.0 COG0302@1|root,COG0302@2|Bacteria,4NFC2@976|Bacteroidetes,2FMYB@200643|Bacteroidia,22WSJ@171551|Porphyromonadaceae 976|Bacteroidetes F GTP cyclohydrolase 1 folE GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 ko:K01495 ko00790,ko01100,map00790,map01100 M00126,M00841,M00842,M00843 R00428,R04639,R05046,R05048 RC00263,RC00294,RC00323,RC00945,RC01188 ko00000,ko00001,ko00002,ko01000 - - - GTP_cyclohydroI PHJFGMMN_00934 411477.PARMER_03163 1.29e-302 823.0 28TKX@1|root,2ZFUJ@2|Bacteria,4NKCT@976|Bacteroidetes,2G3EV@200643|Bacteroidia,22XSQ@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_00935 411477.PARMER_03164 0.0 1116.0 COG5107@1|root,COG5107@2|Bacteria,4NEPG@976|Bacteroidetes,2FNHC@200643|Bacteroidia,22WFC@171551|Porphyromonadaceae 976|Bacteroidetes A Domain of Unknown Function (DUF349) - - - - - - - - - - - - DUF349 PHJFGMMN_00936 411477.PARMER_03165 8.1e-281 769.0 COG1883@1|root,COG1883@2|Bacteria,4NGCN@976|Bacteroidetes,2FNXC@200643|Bacteroidia,22WH7@171551|Porphyromonadaceae 976|Bacteroidetes C Na+-transporting oxaloacetate decarboxylase beta subunit - - 4.1.1.3 ko:K01572 ko00620,ko01100,map00620,map01100 - R00217 RC00040 ko00000,ko00001,ko01000,ko02000 3.B.1.1.1 - - OAD_beta PHJFGMMN_00937 411477.PARMER_03166 0.0 1233.0 COG0511@1|root,COG5016@1|root,COG0511@2|Bacteria,COG5016@2|Bacteria,4NEQV@976|Bacteroidetes,2FMXG@200643|Bacteroidia,22WMD@171551|Porphyromonadaceae 976|Bacteroidetes C Oxaloacetate decarboxylase - - 6.4.1.1 ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 M00173,M00620 R00344 RC00040,RC00367 ko00000,ko00001,ko00002,ko01000 - - - Biotin_lipoyl,Biotin_lipoyl_2,HMGL-like,PYC_OADA PHJFGMMN_00938 411477.PARMER_03167 7.14e-42 138.0 COG3630@1|root,COG3630@2|Bacteria,4NXVZ@976|Bacteroidetes,2FTVB@200643|Bacteroidia,22Z2E@171551|Porphyromonadaceae 976|Bacteroidetes C Oxaloacetate decarboxylase, gamma chain - - 4.1.1.3 ko:K01573 ko00620,ko01100,map00620,map01100 - R00217 RC00040 ko00000,ko00001,ko01000,ko02000 3.B.1.1.1 - - OAD_gamma PHJFGMMN_00939 411477.PARMER_03168 3.4e-108 325.0 COG0457@1|root,COG0457@2|Bacteria,4NMG2@976|Bacteroidetes,2FP23@200643|Bacteroidia,22XTY@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_1,TPR_16,TPR_19,TPR_2,TPR_8 PHJFGMMN_00940 411477.PARMER_03172 5.21e-227 627.0 COG3710@1|root,COG3710@2|Bacteria 2|Bacteria K Transcriptional regulator - - - - - - - - - - - - Trans_reg_C PHJFGMMN_00942 411477.PARMER_03175 8.44e-264 721.0 COG3391@1|root,COG3391@2|Bacteria,4NM81@976|Bacteroidetes,2FP02@200643|Bacteroidia,22XZP@171551|Porphyromonadaceae 976|Bacteroidetes S TolB-like 6-blade propeller-like - - - - - - - - - - - - TolB_like PHJFGMMN_00943 411477.PARMER_03176 5.79e-214 590.0 2BZEB@1|root,2ZMZD@2|Bacteria,4NMWK@976|Bacteroidetes,2FQNP@200643|Bacteroidia,22XQ3@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1573) - - - - - - - - - - - - DUF1573 PHJFGMMN_00944 1235803.C825_02443 3.25e-17 75.9 296Z9@1|root,2ZU7U@2|Bacteria,4P8CM@976|Bacteroidetes 976|Bacteroidetes S NVEALA protein - - - - - - - - - - - - NVEALA PHJFGMMN_00946 411477.PARMER_03181 2.53e-266 728.0 COG3391@1|root,COG3391@2|Bacteria,4P5NR@976|Bacteroidetes,2FZ2G@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4934) - - - - - - - - - - - - DUF5128 PHJFGMMN_00947 999419.HMPREF1077_00112 6.3e-19 80.1 2DCRY@1|root,2ZF47@2|Bacteria,4P972@976|Bacteroidetes 976|Bacteroidetes S NVEALA protein - - - - - - - - - - - - NVEALA PHJFGMMN_00948 411477.PARMER_03183 8.58e-251 687.0 2F8ZB@1|root,341B2@2|Bacteria,4P4SF@976|Bacteroidetes,2FUV2@200643|Bacteroidia,2318M@171551|Porphyromonadaceae 976|Bacteroidetes S TolB-like 6-blade propeller-like - - - - - - - - - - - - TolB_like PHJFGMMN_00949 435591.BDI_0049 7.1e-76 245.0 COG3391@1|root,COG3391@2|Bacteria 2|Bacteria CO amine dehydrogenase activity - - - - - - - - - - - - DUF5128 PHJFGMMN_00950 999419.HMPREF1077_00113 7.38e-23 94.7 2BZEB@1|root,2ZMZD@2|Bacteria,4NMWK@976|Bacteroidetes,2FQNP@200643|Bacteroidia,22XQ3@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1573) - - - - - - - - - - - - DUF1573 PHJFGMMN_00951 999419.HMPREF1077_00112 9.67e-19 79.7 2DCRY@1|root,2ZF47@2|Bacteria,4P972@976|Bacteroidetes 976|Bacteroidetes S NVEALA protein - - - - - - - - - - - - NVEALA PHJFGMMN_00952 411477.PARMER_03190 2.24e-262 718.0 COG3391@1|root,COG3391@2|Bacteria,4P4JU@976|Bacteroidetes,2FUCS@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4934) - - - - - - - - - - - - DUF5128 PHJFGMMN_00954 411477.PARMER_03195 3.34e-19 80.9 2DCRY@1|root,2ZF47@2|Bacteria,4P972@976|Bacteroidetes 976|Bacteroidetes S NVEALA protein - - - - - - - - - - - - NVEALA PHJFGMMN_00955 411477.PARMER_03194 4.39e-290 790.0 2DW4W@1|root,33YJ0@2|Bacteria,4PMV3@976|Bacteroidetes,2FUB2@200643|Bacteroidia 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 PHJFGMMN_00956 411477.PARMER_03195 4.84e-58 179.0 2DCRY@1|root,2ZF47@2|Bacteria,4P972@976|Bacteroidetes 976|Bacteroidetes S NVEALA protein - - - - - - - - - - - - NVEALA PHJFGMMN_00957 411477.PARMER_03196 1.04e-289 790.0 2DPKY@1|root,332K2@2|Bacteria,4NVGX@976|Bacteroidetes,2FSTM@200643|Bacteroidia,230S1@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - DUF4221 PHJFGMMN_00958 411477.PARMER_03197 0.0 1337.0 COG1305@1|root,COG1305@2|Bacteria,4NGMN@976|Bacteroidetes,2FM89@200643|Bacteroidia,22W96@171551|Porphyromonadaceae 976|Bacteroidetes E non supervised orthologous group - - - - - - - - - - - - Transglut_core PHJFGMMN_00959 411477.PARMER_03198 1e-216 597.0 COG0681@1|root,COG0681@2|Bacteria,4NJXI@976|Bacteroidetes,2FNKZ@200643|Bacteroidia,22XP5@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the peptidase S26 family - - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24,Peptidase_S26 PHJFGMMN_00960 411477.PARMER_03199 0.0 1199.0 COG0457@1|root,COG3307@1|root,COG0457@2|Bacteria,COG3307@2|Bacteria,4NJ9U@976|Bacteroidetes,2FMEI@200643|Bacteroidia,22XAU@171551|Porphyromonadaceae 976|Bacteroidetes M O-Antigen ligase - - - - - - - - - - - - ANAPC3,TPR_8,Wzy_C PHJFGMMN_00961 411477.PARMER_03200 1.26e-246 678.0 COG0845@1|root,COG0845@2|Bacteria,4NHJH@976|Bacteroidetes,2FP9C@200643|Bacteroidia,22VUH@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 PHJFGMMN_00962 411477.PARMER_03201 0.0 1937.0 COG0841@1|root,COG0841@2|Bacteria,4NE3H@976|Bacteroidetes,2FN4H@200643|Bacteroidia,22WXN@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran PHJFGMMN_00963 411477.PARMER_03202 0.0 954.0 COG1538@1|root,COG1538@2|Bacteria,4NGXM@976|Bacteroidetes,2FMD9@200643|Bacteroidia,22XFV@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP PHJFGMMN_00964 999419.HMPREF1077_00103 0.0 2014.0 COG0841@1|root,COG0841@2|Bacteria,4NH0G@976|Bacteroidetes,2FM3G@200643|Bacteroidia,22X2G@171551|Porphyromonadaceae 976|Bacteroidetes V AcrB/AcrD/AcrF family - - - - - - - - - - - - ACR_tran PHJFGMMN_00965 411477.PARMER_00038 0.0 1209.0 COG3307@1|root,COG3307@2|Bacteria,4NJ9U@976|Bacteroidetes,2FMEI@200643|Bacteroidia,22XAU@171551|Porphyromonadaceae 976|Bacteroidetes M O-Antigen ligase - - - - - - - - - - - - ANAPC3,TPR_8,Wzy_C PHJFGMMN_00966 411477.PARMER_00037 0.0 1217.0 COG4225@1|root,COG4225@2|Bacteria,4NF1N@976|Bacteroidetes,2G3HE@200643|Bacteroidia,22Z10@171551|Porphyromonadaceae 976|Bacteroidetes S Heparinase II/III-like protein - - - - - - - - - - - - DUF4962,Hepar_II_III PHJFGMMN_00967 411477.PARMER_00035 0.0 2105.0 COG0458@1|root,COG0458@2|Bacteria,4NEQ0@976|Bacteroidetes,2FMKD@200643|Bacteroidia,22X6E@171551|Porphyromonadaceae 976|Bacteroidetes EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain carB - 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - CPSase_L_D2,CPSase_L_D3,MGS PHJFGMMN_00968 411477.PARMER_00034 0.0 1357.0 COG2825@1|root,COG2825@2|Bacteria,4PMUJ@976|Bacteroidetes,2G0GN@200643|Bacteroidia,22X9J@171551|Porphyromonadaceae 976|Bacteroidetes M helix_turn_helix, Lux Regulon - - - - - - - - - - - - Y_Y_Y PHJFGMMN_00969 411477.PARMER_00033 0.0 935.0 COG0446@1|root,COG0446@2|Bacteria,4NEK6@976|Bacteroidetes,2FT9Y@200643|Bacteroidia,22ZSH@171551|Porphyromonadaceae 976|Bacteroidetes S Pyridine nucleotide-disulphide oxidoreductase - - 1.8.5.4 ko:K17218 ko00920,map00920 - R10152 RC03155 ko00000,ko00001,ko01000 - - - Pyr_redox_2 PHJFGMMN_00970 411477.PARMER_00032 1.45e-280 766.0 COG3391@1|root,COG3391@2|Bacteria,4P02P@976|Bacteroidetes,2FNKC@200643|Bacteroidia,2303Q@171551|Porphyromonadaceae 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 PHJFGMMN_00972 411477.PARMER_00028 4.16e-283 772.0 COG0614@1|root,COG0614@2|Bacteria,4NH9F@976|Bacteroidetes,2FMDS@200643|Bacteroidia,22X11@171551|Porphyromonadaceae 976|Bacteroidetes P COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component - - - ko:K02016 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - Peripla_BP_2 PHJFGMMN_00973 411477.PARMER_00027 1.36e-265 726.0 COG3391@1|root,COG3391@2|Bacteria,4NESV@976|Bacteroidetes,2G2ND@200643|Bacteroidia,22YAZ@171551|Porphyromonadaceae 976|Bacteroidetes S amine dehydrogenase activity - - - - - - - - - - - - - PHJFGMMN_00974 411477.PARMER_00026 0.0 1366.0 COG4206@1|root,COG4206@2|Bacteria,4NED9@976|Bacteroidetes,2FNSZ@200643|Bacteroidia,22WUA@171551|Porphyromonadaceae 976|Bacteroidetes H TonB-dependent receptor - - - - - - - - - - - - Plug,TonB_dep_Rec PHJFGMMN_00976 411477.PARMER_00024 0.0 979.0 COG0055@1|root,COG0055@2|Bacteria,4NF1Q@976|Bacteroidetes,2FP0J@200643|Bacteroidia,22W4U@171551|Porphyromonadaceae 976|Bacteroidetes C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits atpD - 3.6.3.14 ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 - - ATP-synt_ab,ATP-synt_ab_N PHJFGMMN_00977 411477.PARMER_00023 1.36e-49 157.0 COG0355@1|root,COG0355@2|Bacteria,4NUYG@976|Bacteroidetes,2FUIM@200643|Bacteroidia,22YYA@171551|Porphyromonadaceae 976|Bacteroidetes C ATP synthase atpC - - ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt_DE_N PHJFGMMN_00978 411477.PARMER_00022 9.37e-96 279.0 2EK6R@1|root,33DX4@2|Bacteria,4NY14@976|Bacteroidetes,2FVRA@200643|Bacteroidia,22YXH@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - PHJFGMMN_00979 411477.PARMER_00021 9.4e-257 703.0 COG0356@1|root,COG0356@2|Bacteria,4NEPK@976|Bacteroidetes,2FNAB@200643|Bacteroidia,22VYZ@171551|Porphyromonadaceae 976|Bacteroidetes C it plays a direct role in the translocation of protons across the membrane atpB - - ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194,ko03110 3.A.2.1 - - ATP-synt_A PHJFGMMN_00980 411477.PARMER_00020 2.87e-29 106.0 COG0636@1|root,COG0636@2|Bacteria,4NURW@976|Bacteroidetes,2FTSZ@200643|Bacteroidia,22YE5@171551|Porphyromonadaceae 976|Bacteroidetes C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation atpE GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt_C PHJFGMMN_00981 411477.PARMER_00019 2.07e-67 209.0 COG0711@1|root,COG0711@2|Bacteria,4NQKA@976|Bacteroidetes,2FQWH@200643|Bacteroidia,22Y51@171551|Porphyromonadaceae 976|Bacteroidetes C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) atpF - - ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt_B PHJFGMMN_00982 411477.PARMER_00018 9.72e-121 345.0 COG0712@1|root,COG0712@2|Bacteria,4NSNF@976|Bacteroidetes,2FQZ5@200643|Bacteroidia,22YFG@171551|Porphyromonadaceae 976|Bacteroidetes C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation atpH - - ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - OSCP PHJFGMMN_00983 411477.PARMER_00017 0.0 1018.0 COG0056@1|root,COG0056@2|Bacteria,4NFZW@976|Bacteroidetes,2FM4H@200643|Bacteroidia,22WEQ@171551|Porphyromonadaceae 976|Bacteroidetes C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit atpA - 3.6.3.14 ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 - - ATP-synt_ab,ATP-synt_ab_C,ATP-synt_ab_N PHJFGMMN_00984 411477.PARMER_00016 3.99e-197 547.0 COG0224@1|root,COG0224@2|Bacteria,4NECM@976|Bacteroidetes,2FP5N@200643|Bacteroidia,22WNB@171551|Porphyromonadaceae 976|Bacteroidetes C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex atpG - - ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt PHJFGMMN_00985 411477.PARMER_00015 0.0 1487.0 COG1327@1|root,COG1328@1|root,COG1327@2|Bacteria,COG1328@2|Bacteria,4NGPS@976|Bacteroidetes,2FNK4@200643|Bacteroidia,22WTK@171551|Porphyromonadaceae 976|Bacteroidetes FK Ribonucleoside-triphosphate reductase nrdD - 1.1.98.6 ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R11633,R11634,R11635,R11636 RC00613 ko00000,ko00001,ko00002,ko01000 - - - ATP-cone,NRDD PHJFGMMN_00986 411477.PARMER_00014 1.37e-120 343.0 COG0602@1|root,COG0602@2|Bacteria,4NN9F@976|Bacteroidetes,2FPEE@200643|Bacteroidia,22Y2A@171551|Porphyromonadaceae 976|Bacteroidetes C Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine nrdG - 1.97.1.4 ko:K04068 - - R04710 - ko00000,ko01000 - - - Fer4_12,Radical_SAM PHJFGMMN_00987 411477.PARMER_00013 0.0 875.0 COG2966@1|root,COG3610@1|root,COG2966@2|Bacteria,COG3610@2|Bacteria,4NI61@976|Bacteroidetes,2FNR6@200643|Bacteroidia,22X7F@171551|Porphyromonadaceae 976|Bacteroidetes S Putative threonine/serine exporter - - - - - - - - - - - - ThrE,ThrE_2 PHJFGMMN_00988 411477.PARMER_00012 0.0 1003.0 COG4799@1|root,COG4799@2|Bacteria,4NEMJ@976|Bacteroidetes,2FNCD@200643|Bacteroidia,22W7T@171551|Porphyromonadaceae 976|Bacteroidetes I Carboxyl transferase domain - - 2.1.3.15,6.4.1.3 ko:K01966 ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200 M00373,M00741 R01859 RC00097,RC00609 ko00000,ko00001,ko00002,ko01000 - - - Carboxyl_trans PHJFGMMN_00989 411477.PARMER_00011 2.3e-123 352.0 COG4770@1|root,COG4770@2|Bacteria,4NQ86@976|Bacteroidetes,2FNTU@200643|Bacteroidia,22YEW@171551|Porphyromonadaceae 976|Bacteroidetes I Biotin-requiring enzyme - - 6.4.1.1 ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 M00173,M00620 R00344 RC00040,RC00367 ko00000,ko00001,ko00002,ko01000 - - - Biotin_lipoyl PHJFGMMN_00990 411477.PARMER_00010 0.0 1011.0 COG0439@1|root,COG0439@2|Bacteria,4NFEQ@976|Bacteroidetes,2FMBN@200643|Bacteroidia,22WI1@171551|Porphyromonadaceae 976|Bacteroidetes I Biotin carboxylase C-terminal domain accC - 6.3.4.14,6.4.1.2,6.4.1.3 ko:K01961,ko:K01965 ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00373,M00376,M00741 R00742,R01859,R04385 RC00040,RC00097,RC00253,RC00367,RC00609 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,CPSase_L_D2 PHJFGMMN_00991 411477.PARMER_00008 1.36e-270 739.0 COG3274@1|root,COG3274@2|Bacteria,4NNCD@976|Bacteroidetes,2G2FY@200643|Bacteroidia,231WI@171551|Porphyromonadaceae 976|Bacteroidetes M Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 PHJFGMMN_00993 411477.PARMER_00005 8.99e-116 332.0 COG1595@1|root,COG1595@2|Bacteria,4NTD3@976|Bacteroidetes,2G33X@200643|Bacteroidia 976|Bacteroidetes K Putative helix-turn-helix protein, YlxM / p13 like - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_00994 411477.PARMER_00004 0.0 1382.0 COG0614@1|root,COG0614@2|Bacteria,4NEXQ@976|Bacteroidetes,2G2NN@200643|Bacteroidia,22XB6@171551|Porphyromonadaceae 976|Bacteroidetes P SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_00995 411477.PARMER_00003 0.0 2254.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,22W9I@171551|Porphyromonadaceae 976|Bacteroidetes P CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_00996 411477.PARMER_00002 1.69e-180 509.0 COG3712@1|root,COG3712@2|Bacteria,4NE6N@976|Bacteroidetes,2G30E@200643|Bacteroidia 976|Bacteroidetes PT COG3712 Fe2 -dicitrate sensor, membrane component - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_00997 411477.PARMER_01720 0.0 1630.0 COG1629@1|root,COG4771@2|Bacteria,4NF05@976|Bacteroidetes,2FMJS@200643|Bacteroidia,22X9C@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor - - - ko:K16089 - - - - ko00000,ko02000 1.B.14.1,1.B.14.10 - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_00999 411477.PARMER_01717 7.82e-80 237.0 COG5496@1|root,COG5496@2|Bacteria,4NR7G@976|Bacteroidetes,2FUCR@200643|Bacteroidia 976|Bacteroidetes S Thioesterase family - - - - - - - - - - - - 4HBT PHJFGMMN_01000 999419.HMPREF1077_00069 0.0 1563.0 COG4206@1|root,COG4206@2|Bacteria,4NE1W@976|Bacteroidetes,2FME0@200643|Bacteroidia,22XAS@171551|Porphyromonadaceae 976|Bacteroidetes H TonB-dependent Receptor Plug Domain - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,Plug,TonB_dep_Rec PHJFGMMN_01001 411477.PARMER_01716 0.0 998.0 COG5492@1|root,COG5492@2|Bacteria,4NJ44@976|Bacteroidetes,2G0H1@200643|Bacteroidia,2323Z@171551|Porphyromonadaceae 976|Bacteroidetes N Bacterial Ig-like domain 2 - - - - - - - - - - - - Big_2 PHJFGMMN_01002 411477.PARMER_01713 8.08e-190 526.0 COG0483@1|root,COG0483@2|Bacteria,4NI6D@976|Bacteroidetes,2FNAK@200643|Bacteroidia,22X9F@171551|Porphyromonadaceae 976|Bacteroidetes G Inositol monophosphatase family suhB - 3.1.3.25 ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 M00131 R01185,R01186,R01187 RC00078 ko00000,ko00001,ko00002,ko01000 - - - Inositol_P PHJFGMMN_01003 411477.PARMER_01711 0.0 2997.0 COG2911@1|root,COG2911@2|Bacteria,4NF7F@976|Bacteroidetes,2FPH8@200643|Bacteroidia,22WTX@171551|Porphyromonadaceae 976|Bacteroidetes M TamB, inner membrane protein subunit of TAM complex - - - - - - - - - - - - TamB PHJFGMMN_01004 411477.PARMER_01710 0.0 1558.0 COG4775@1|root,COG4775@2|Bacteria,4NE80@976|Bacteroidetes,2G3E0@200643|Bacteroidia,22WAV@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein, OMP85 family - - - - - - - - - - - - Bac_surface_Ag PHJFGMMN_01005 411477.PARMER_01709 9.62e-216 595.0 COG0010@1|root,COG0010@2|Bacteria,4NE26@976|Bacteroidetes,2FU2Y@200643|Bacteroidia,22YZP@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the arginase family rocF - 3.5.3.1,3.5.3.11 ko:K01476,ko:K01480 ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146 M00029,M00133,M00134 R00551,R01157 RC00024,RC00329 ko00000,ko00001,ko00002,ko01000 - - - Arginase PHJFGMMN_01006 411477.PARMER_01708 1.98e-302 823.0 COG4992@1|root,COG4992@2|Bacteria,4NE93@976|Bacteroidetes,2FMPQ@200643|Bacteroidia,22WQY@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family rocD - 2.6.1.13 ko:K00819 ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130 - R00667 RC00006,RC00062 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_3 PHJFGMMN_01007 411477.PARMER_01707 3.63e-288 788.0 COG0477@1|root,COG2814@2|Bacteria,4PKJD@976|Bacteroidetes,2G0H0@200643|Bacteroidia,2323Y@171551|Porphyromonadaceae 976|Bacteroidetes EGP MFS_1 like family - - - - - - - - - - - - Nuc_H_symport PHJFGMMN_01008 411477.PARMER_01705 0.0 2415.0 COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,2FM2N@200643|Bacteroidia,22X4F@171551|Porphyromonadaceae 976|Bacteroidetes T Y_Y_Y domain - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y PHJFGMMN_01009 411477.PARMER_01704 6.88e-278 759.0 COG0204@1|root,COG0204@2|Bacteria,4NGR9@976|Bacteroidetes,2FM79@200643|Bacteroidia,22VV6@171551|Porphyromonadaceae 976|Bacteroidetes I Acyltransferase - - - - - - - - - - - - Acyltransferase PHJFGMMN_01010 411477.PARMER_01703 7.8e-238 653.0 COG1181@1|root,COG1181@2|Bacteria,4NE9P@976|Bacteroidetes,2FNMC@200643|Bacteroidia,22WV1@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the D-alanine--D-alanine ligase family ddl - 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 - R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Dala_Dala_lig_C,Dala_Dala_lig_N PHJFGMMN_01011 411477.PARMER_01702 2.44e-267 731.0 COG0564@1|root,COG0564@2|Bacteria,4NEV3@976|Bacteroidetes,2FMD1@200643|Bacteroidia,22W4T@171551|Porphyromonadaceae 976|Bacteroidetes J Responsible for synthesis of pseudouridine from uracil rluD - 5.4.99.23 ko:K06180 - - - - ko00000,ko01000,ko03009 - - - PseudoU_synth_2,S4 PHJFGMMN_01012 411477.PARMER_01701 3.85e-144 407.0 COG2815@1|root,COG2815@2|Bacteria,4NSUI@976|Bacteroidetes,2FPS4@200643|Bacteroidia,22YEV@171551|Porphyromonadaceae 976|Bacteroidetes S PASTA domain protein pknB - 2.7.11.1,6.3.2.4 ko:K01921,ko:K08884,ko:K12132 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 - R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01001,ko01011 - - - PASTA PHJFGMMN_01013 1235803.C825_02399 1.85e-26 97.1 COG0230@1|root,COG0230@2|Bacteria,4NUTV@976|Bacteroidetes,2FUJ7@200643|Bacteroidia,23132@171551|Porphyromonadaceae 976|Bacteroidetes J Ribosomal protein L34 rpmH - - ko:K02914 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L34 PHJFGMMN_01014 411477.PARMER_03199 0.0 1197.0 COG0457@1|root,COG3307@1|root,COG0457@2|Bacteria,COG3307@2|Bacteria,4NJ9U@976|Bacteroidetes,2FMEI@200643|Bacteroidia,22XAU@171551|Porphyromonadaceae 976|Bacteroidetes M O-Antigen ligase - - - - - - - - - - - - ANAPC3,TPR_8,Wzy_C PHJFGMMN_01015 411477.PARMER_03198 1e-216 597.0 COG0681@1|root,COG0681@2|Bacteria,4NJXI@976|Bacteroidetes,2FNKZ@200643|Bacteroidia,22XP5@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the peptidase S26 family - - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24,Peptidase_S26 PHJFGMMN_01016 411477.PARMER_03197 0.0 1337.0 COG1305@1|root,COG1305@2|Bacteria,4NGMN@976|Bacteroidetes,2FM89@200643|Bacteroidia,22W96@171551|Porphyromonadaceae 976|Bacteroidetes E non supervised orthologous group - - - - - - - - - - - - Transglut_core PHJFGMMN_01017 411477.PARMER_03196 1.04e-289 790.0 2DPKY@1|root,332K2@2|Bacteria,4NVGX@976|Bacteroidetes,2FSTM@200643|Bacteroidia,230S1@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - DUF4221 PHJFGMMN_01018 411477.PARMER_01680 1.06e-54 170.0 2DCRY@1|root,2ZF47@2|Bacteria,4P972@976|Bacteroidetes 976|Bacteroidetes S NVEALA protein - - - - - - - - - - - - NVEALA PHJFGMMN_01019 411477.PARMER_01679 1.51e-262 718.0 COG3391@1|root,COG3391@2|Bacteria,4NU1X@976|Bacteroidetes,2FR4G@200643|Bacteroidia,22YGV@171551|Porphyromonadaceae 976|Bacteroidetes S TolB-like 6-blade propeller-like - - - - - - - - - - - - TolB_like PHJFGMMN_01021 1235803.C825_02443 2.17e-15 71.2 296Z9@1|root,2ZU7U@2|Bacteria,4P8CM@976|Bacteroidetes 976|Bacteroidetes S NVEALA protein - - - - - - - - - - - - NVEALA PHJFGMMN_01022 411477.PARMER_01676 3.79e-211 583.0 2BZEB@1|root,2ZMZD@2|Bacteria,4NMWK@976|Bacteroidetes,2FQNP@200643|Bacteroidia,22XQ3@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1573) - - - - - - - - - - - - DUF1573 PHJFGMMN_01023 999419.HMPREF1077_00114 1.59e-243 670.0 COG3391@1|root,COG3391@2|Bacteria,4NM81@976|Bacteroidetes,2FP02@200643|Bacteroidia,22XZP@171551|Porphyromonadaceae 976|Bacteroidetes S TolB-like 6-blade propeller-like - - - - - - - - - - - - TolB_like PHJFGMMN_01025 411477.PARMER_01673 1.07e-263 723.0 COG3710@1|root,COG3710@2|Bacteria,4P6VC@976|Bacteroidetes 976|Bacteroidetes K Transcriptional regulator - - - - - - - - - - - - Trans_reg_C PHJFGMMN_01026 411477.PARMER_01669 1.3e-252 692.0 28KNF@1|root,2ZA6N@2|Bacteria,4NGZC@976|Bacteroidetes,2FPMJ@200643|Bacteroidia,22W2H@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - DUF5128,TolB_like PHJFGMMN_01028 411477.PARMER_01667 2.8e-257 704.0 COG0180@1|root,COG0180@2|Bacteria,4NETX@976|Bacteroidetes,2FMAT@200643|Bacteroidia,22VZJ@171551|Porphyromonadaceae 976|Bacteroidetes J Tryptophanyl-tRNA synthetase trpS - 6.1.1.2 ko:K01867 ko00970,map00970 M00359,M00360 R03664 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_1b PHJFGMMN_01029 411477.PARMER_01666 1.3e-116 334.0 COG1595@1|root,COG1595@2|Bacteria,4NP39@976|Bacteroidetes,2FP42@200643|Bacteroidia,22Y53@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_01030 411477.PARMER_01665 6.25e-184 512.0 2DX7F@1|root,343QT@2|Bacteria,4P6PI@976|Bacteroidetes,2FSXP@200643|Bacteroidia 976|Bacteroidetes S Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl_2 PHJFGMMN_01031 411477.PARMER_01664 1.27e-181 508.0 COG3712@1|root,COG3712@2|Bacteria,4NSK2@976|Bacteroidetes,2FSKZ@200643|Bacteroidia,22YFD@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_01032 411477.PARMER_01663 0.0 1814.0 COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,2FM7I@200643|Bacteroidia,22XCB@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor plug domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_01033 411477.PARMER_01662 8.59e-252 690.0 2EDB5@1|root,3377G@2|Bacteria,4NZFE@976|Bacteroidetes,2G1S3@200643|Bacteroidia,2315Q@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4249) - - - - - - - - - - - - DUF4249 PHJFGMMN_01034 411477.PARMER_01661 0.0 1859.0 COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,2FM7I@200643|Bacteroidia,22XCB@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor plug domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_01035 411477.PARMER_01660 1.09e-251 689.0 2EG5K@1|root,339XG@2|Bacteria,4NVFE@976|Bacteroidetes,2G2D7@200643|Bacteroidia,231W5@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4249) - - - - - - - - - - - - DUF4249 PHJFGMMN_01036 411477.PARMER_01659 2.58e-225 619.0 COG0708@1|root,COG0708@2|Bacteria,4NR5R@976|Bacteroidetes,2FR88@200643|Bacteroidia,230JN@171551|Porphyromonadaceae 976|Bacteroidetes L Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos PHJFGMMN_01037 411477.PARMER_01658 1.36e-204 565.0 2C8MF@1|root,2ZKMZ@2|Bacteria,4P812@976|Bacteroidetes,2FVI1@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01038 411477.PARMER_01657 2.48e-36 122.0 COG1595@1|root,COG1595@2|Bacteria 2|Bacteria K DNA-templated transcription, initiation - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2,zf-HC2 PHJFGMMN_01039 411477.PARMER_01656 2.14e-154 433.0 COG0176@1|root,COG0176@2|Bacteria,4NFVZ@976|Bacteroidetes,2FNM3@200643|Bacteroidia,22X0U@171551|Porphyromonadaceae 976|Bacteroidetes F Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway tal - 2.2.1.2 ko:K00616,ko:K08314 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01827 RC00439,RC00604 ko00000,ko00001,ko00002,ko01000 - - - TAL_FSA PHJFGMMN_01040 411477.PARMER_01655 0.0 1543.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN93@200643|Bacteroidia,22WTA@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD PHJFGMMN_01041 411477.PARMER_01654 1.17e-181 506.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMRV@200643|Bacteroidia,22W60@171551|Porphyromonadaceae 976|Bacteroidetes T COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat PHJFGMMN_01042 1235803.C825_02597 3.59e-79 259.0 298AE@1|root,2ZVFY@2|Bacteria,4P8XC@976|Bacteroidetes 976|Bacteroidetes - - - - - - - - - - - - - - DUF4933,DUF5128 PHJFGMMN_01043 411477.PARMER_01649 0.0 892.0 2A58H@1|root,30TXN@2|Bacteria,4NPD1@976|Bacteroidetes,2FQJR@200643|Bacteroidia,22Y14@171551|Porphyromonadaceae 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 PHJFGMMN_01044 411477.PARMER_01648 7.49e-232 639.0 COG4191@1|root,COG4191@2|Bacteria,4PMUQ@976|Bacteroidetes 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c PHJFGMMN_01045 411477.PARMER_01647 0.0 1834.0 COG1506@1|root,COG1506@2|Bacteria,4NDVD@976|Bacteroidetes,2FPXW@200643|Bacteroidia,22WN5@171551|Porphyromonadaceae 976|Bacteroidetes E Prolyl oligopeptidase family - - - - - - - - - - - - Peptidase_S9 PHJFGMMN_01046 411477.PARMER_01646 4.98e-250 685.0 2FJ9F@1|root,34AZF@2|Bacteria,4P8DW@976|Bacteroidetes,2FZZQ@200643|Bacteroidia 976|Bacteroidetes S Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 PHJFGMMN_01047 411477.PARMER_01645 2.91e-277 758.0 COG0526@1|root,COG0526@2|Bacteria,4NMSZ@976|Bacteroidetes,2FPQE@200643|Bacteroidia,22XXU@171551|Porphyromonadaceae 976|Bacteroidetes CO Domain of unknown function (DUF4369) - - - - - - - - - - - - AhpC-TSA,DUF4369 PHJFGMMN_01048 411477.PARMER_01644 1.33e-151 427.0 COG1136@1|root,COG1136@2|Bacteria,4NFDW@976|Bacteroidetes,2FMDA@200643|Bacteroidia,22XHP@171551|Porphyromonadaceae 976|Bacteroidetes V Rad17 cell cycle checkpoint protein - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran PHJFGMMN_01050 411477.PARMER_01643 1.25e-195 541.0 COG2816@1|root,COG2816@2|Bacteria,4NKCV@976|Bacteroidetes,2FN61@200643|Bacteroidia,22YHY@171551|Porphyromonadaceae 976|Bacteroidetes L NADH pyrophosphatase zinc ribbon domain nudC - 3.6.1.22 ko:K03426 ko00760,ko01100,ko04146,map00760,map01100,map04146 - R00103,R03004,R11104 RC00002 ko00000,ko00001,ko01000 - - - NUDIX,NUDIX-like,zf-NADH-PPase PHJFGMMN_01051 411477.PARMER_01642 0.0 1399.0 COG1506@1|root,COG1506@2|Bacteria,4NE2Q@976|Bacteroidetes,2FPZU@200643|Bacteroidia,22VXZ@171551|Porphyromonadaceae 976|Bacteroidetes E Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - - - - - - - - - - DPPIV_N,Peptidase_S9 PHJFGMMN_01052 411477.PARMER_01641 0.0 1075.0 COG4409@1|root,COG4409@2|Bacteria,4NFNK@976|Bacteroidetes,2FNCR@200643|Bacteroidia,22ZYS@171551|Porphyromonadaceae 976|Bacteroidetes G N-terminal domain of BNR-repeat neuraminidase - - 3.2.1.18 ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 - R04018 RC00028,RC00077 ko00000,ko00001,ko01000,ko02042 - GH33 - BNR_2,BNR_3,BNR_assoc_N PHJFGMMN_01053 411477.PARMER_01640 0.0 996.0 COG3119@1|root,COG3119@2|Bacteria,4NFGI@976|Bacteroidetes,2FMUC@200643|Bacteroidia 976|Bacteroidetes P COG COG3119 Arylsulfatase A and related enzymes - - - - - - - - - - - - DUF4976,Sulfatase PHJFGMMN_01054 411477.PARMER_01639 1.19e-282 771.0 COG4409@1|root,COG4409@2|Bacteria,4NFNK@976|Bacteroidetes,2FQR6@200643|Bacteroidia,231H0@171551|Porphyromonadaceae 976|Bacteroidetes G BNR/Asp-box repeat - - 3.2.1.18 ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 - R04018 RC00028,RC00077 ko00000,ko00001,ko01000,ko02042 - GH33 - BNR_2,BNR_assoc_N PHJFGMMN_01055 411477.PARMER_01638 7.49e-236 647.0 COG0329@1|root,COG0329@2|Bacteria,4NKXI@976|Bacteroidetes,2FWIB@200643|Bacteroidia 976|Bacteroidetes EM Dihydrodipicolinate synthetase family - - - - - - - - - - - - DHDPS PHJFGMMN_01056 411477.PARMER_01637 0.0 984.0 COG0702@1|root,COG0702@2|Bacteria,4NEPE@976|Bacteroidetes,2FNTP@200643|Bacteroidia,231I8@171551|Porphyromonadaceae 976|Bacteroidetes GM SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_01057 411477.PARMER_01636 0.0 2105.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22X4D@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_01058 411477.PARMER_01635 3.11e-219 604.0 COG0329@1|root,COG0329@2|Bacteria,4NHBA@976|Bacteroidetes,2FM35@200643|Bacteroidia,22WCK@171551|Porphyromonadaceae 976|Bacteroidetes EM Belongs to the DapA family - - 4.1.3.3,4.2.1.41,4.3.3.7 ko:K01639,ko:K01707,ko:K01714 ko00053,ko00261,ko00300,ko00520,ko01100,ko01110,ko01120,ko01130,ko01230,map00053,map00261,map00300,map00520,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R01811,R02279,R10147 RC00159,RC00600,RC00678,RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 - - - DHDPS PHJFGMMN_01059 411477.PARMER_01634 0.0 1712.0 COG0591@1|root,COG3055@1|root,COG0591@2|Bacteria,COG3055@2|Bacteria,4NEN8@976|Bacteroidetes,2FPDT@200643|Bacteroidia,22Y18@171551|Porphyromonadaceae 976|Bacteroidetes E Sodium:solute symporter family - - - - - - - - - - - - Kelch_1,Kelch_5,SSF PHJFGMMN_01060 411477.PARMER_01633 1.61e-163 458.0 COG2186@1|root,COG2186@2|Bacteria,4NEUP@976|Bacteroidetes,2FQHW@200643|Bacteroidia,22ZGU@171551|Porphyromonadaceae 976|Bacteroidetes K FCD - - - - - - - - - - - - FCD,GntR PHJFGMMN_01063 411477.PARMER_01630 2.6e-254 698.0 COG0526@1|root,COG0526@2|Bacteria,4NEX3@976|Bacteroidetes,2FN8N@200643|Bacteroidia,22XAM@171551|Porphyromonadaceae 976|Bacteroidetes CO Antioxidant, AhpC TSA family - - - - - - - - - - - - AhpC-TSA,DUF4369,Thioredoxin_8 PHJFGMMN_01064 411477.PARMER_01629 0.0 1513.0 COG0577@1|root,COG0577@2|Bacteria,4P04X@976|Bacteroidetes,2FM7X@200643|Bacteroidia,22ZDY@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - - - - - - - - - - FtsX,MacB_PCD PHJFGMMN_01065 411477.PARMER_01628 0.0 1570.0 COG0577@1|root,COG0577@2|Bacteria,4P0SY@976|Bacteroidetes,2FS0I@200643|Bacteroidia 976|Bacteroidetes V MacB-like periplasmic core domain - - - - - - - - - - - - FtsX,MacB_PCD PHJFGMMN_01066 411477.PARMER_01627 0.0 1516.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2G2XM@200643|Bacteroidia,22WGT@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD PHJFGMMN_01067 411477.PARMER_01626 0.0 1551.0 COG0577@1|root,COG0577@2|Bacteria,4NKVT@976|Bacteroidetes,2G2XN@200643|Bacteroidia,22Z46@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - - - - - - - - - - FtsX,MacB_PCD PHJFGMMN_01068 411477.PARMER_01625 4.36e-283 775.0 COG0845@1|root,COG0845@2|Bacteria,4NDUH@976|Bacteroidetes,2FM9Q@200643|Bacteroidia,22X9B@171551|Porphyromonadaceae 976|Bacteroidetes M Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 PHJFGMMN_01069 411477.PARMER_01624 0.0 917.0 COG1538@1|root,COG1538@2|Bacteria,4NGXM@976|Bacteroidetes,2FMD9@200643|Bacteroidia,22WDN@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP PHJFGMMN_01070 411477.PARMER_01622 0.0 882.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMTU@200643|Bacteroidia,22WJK@171551|Porphyromonadaceae 976|Bacteroidetes T Sigma-54 interaction domain - - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat PHJFGMMN_01071 411477.PARMER_01621 6.12e-232 639.0 COG5000@1|root,COG5000@2|Bacteria,4NE49@976|Bacteroidetes,2FRVJ@200643|Bacteroidia,22VYX@171551|Porphyromonadaceae 976|Bacteroidetes T COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation zraS_1 - - - - - - - - - - - HATPase_c,HisKA PHJFGMMN_01072 411477.PARMER_01620 0.0 1478.0 COG0642@1|root,COG0745@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,4NE05@976|Bacteroidetes,2FN0Q@200643|Bacteroidia,2323X@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA PHJFGMMN_01073 411477.PARMER_01619 0.0 1580.0 COG1629@1|root,COG4771@2|Bacteria,4NE4M@976|Bacteroidetes,2FNUY@200643|Bacteroidia,22VV4@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_01074 411477.PARMER_01618 1.15e-149 421.0 COG4121@1|root,COG4121@2|Bacteria,4NE5S@976|Bacteroidetes,2FM5I@200643|Bacteroidia,22XPJ@171551|Porphyromonadaceae 976|Bacteroidetes S S-adenosyl-L-methionine-dependent methyltransferase mnmC - - - - - - - - - - - Methyltransf_30 PHJFGMMN_01075 411477.PARMER_01617 8.22e-72 215.0 COG3118@1|root,COG3118@2|Bacteria,4NQ5B@976|Bacteroidetes,2FTV5@200643|Bacteroidia,22YCQ@171551|Porphyromonadaceae 976|Bacteroidetes O Belongs to the thioredoxin family trxA - - ko:K03671 ko04621,ko05418,map04621,map05418 - - - ko00000,ko00001,ko03110 - - - Thioredoxin PHJFGMMN_01076 411477.PARMER_01616 0.0 2520.0 COG0587@1|root,COG0587@2|Bacteria,4NFA0@976|Bacteroidetes,2FNND@200643|Bacteroidia,22X3C@171551|Porphyromonadaceae 976|Bacteroidetes L DNA-directed DNA polymerase dnaE - 2.7.7.7 ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_alpha,HHH_6,PHP,RNase_T,tRNA_anti-codon PHJFGMMN_01077 999419.HMPREF1077_00167 2.74e-138 392.0 COG3637@1|root,COG3637@2|Bacteria,4NRZA@976|Bacteroidetes,2G1FY@200643|Bacteroidia,22YYY@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl,OMP_b-brl_2 PHJFGMMN_01078 411477.PARMER_01614 9.91e-109 312.0 COG0102@1|root,COG0102@2|Bacteria,4NNGA@976|Bacteroidetes,2FS3I@200643|Bacteroidia,22XMC@171551|Porphyromonadaceae 976|Bacteroidetes J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly rplM - - ko:K02871 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L13 PHJFGMMN_01079 411477.PARMER_01613 2.49e-82 244.0 COG0103@1|root,COG0103@2|Bacteria,4NNN1@976|Bacteroidetes,2FSGZ@200643|Bacteroidia,22XV9@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the universal ribosomal protein uS9 family rpsI - - ko:K02996 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S9 PHJFGMMN_01080 411477.PARMER_01612 9.72e-191 530.0 COG0052@1|root,COG0052@2|Bacteria,4NER0@976|Bacteroidetes,2FM4T@200643|Bacteroidia,22WM5@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the universal ribosomal protein uS2 family rpsB - - ko:K02967 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S2 PHJFGMMN_01081 411477.PARMER_01611 9.29e-225 620.0 COG0264@1|root,COG0264@2|Bacteria,4NF03@976|Bacteroidetes,2FNAD@200643|Bacteroidia,22W7D@171551|Porphyromonadaceae 976|Bacteroidetes J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome tsf GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - ko:K02357 - - - - ko00000,ko03012,ko03029 - - - EF_TS PHJFGMMN_01082 999419.HMPREF1077_00177 9.49e-282 770.0 COG0436@1|root,COG0436@2|Bacteria,4NENS@976|Bacteroidetes,2FMU2@200643|Bacteroidia,22VY5@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase aspC - 2.6.1.1 ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 - R00355,R00694,R00734,R00896,R02433,R02619,R05052 RC00006 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 PHJFGMMN_01083 411477.PARMER_01609 3.96e-294 802.0 COG0108@1|root,COG0807@1|root,COG0108@2|Bacteria,COG0807@2|Bacteria,4NF6I@976|Bacteroidetes,2FNS0@200643|Bacteroidia,22WUR@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate ribBA - 3.5.4.25,4.1.99.12 ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 M00125,M00840 R00425,R07281 RC00293,RC01792,RC01815,RC02504 ko00000,ko00001,ko00002,ko01000 - - - DHBP_synthase,GTP_cyclohydro2 PHJFGMMN_01084 411477.PARMER_01608 0.0 1245.0 COG0795@1|root,COG0795@2|Bacteria,4NE8B@976|Bacteroidetes,2FP6P@200643|Bacteroidia,22XC3@171551|Porphyromonadaceae 976|Bacteroidetes S Permease, YjgP YjgQ family - - - ko:K07091 ko02010,map02010 M00320 - - ko00000,ko00001,ko00002,ko02000 1.B.42.1 - - YjgP_YjgQ PHJFGMMN_01085 411477.PARMER_01607 5.26e-88 258.0 COG3832@1|root,COG3832@2|Bacteria,4NNY1@976|Bacteroidetes,2FSYB@200643|Bacteroidia,22YFH@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - AHSA1 PHJFGMMN_01087 411477.PARMER_01605 4.75e-216 597.0 2FA05@1|root,347QT@2|Bacteria,4P5V6@976|Bacteroidetes,2FYSR@200643|Bacteroidia,230WN@171551|Porphyromonadaceae 976|Bacteroidetes S Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 - - - - - - - - - - - - Mfa2 PHJFGMMN_01088 411477.PARMER_01604 0.0 1182.0 COG0642@1|root,COG0745@1|root,COG2207@1|root,COG0642@2|Bacteria,COG0745@2|Bacteria,COG2207@2|Bacteria,4P04W@976|Bacteroidetes,2FP7F@200643|Bacteroidia 976|Bacteroidetes T cheY-homologous receiver domain - - - - - - - - - - - - HTH_18,Response_reg PHJFGMMN_01089 435591.BDI_3498 9.74e-19 96.3 2ENTM@1|root,33GET@2|Bacteria 2|Bacteria S Major fimbrial subunit protein (FimA) - - - - - - - - - - - - P_gingi_FimA PHJFGMMN_01090 411477.PARMER_01602 2.04e-295 805.0 2ENTM@1|root,33GET@2|Bacteria,4P3M4@976|Bacteroidetes 976|Bacteroidetes S Major fimbrial subunit protein (FimA) - GO:0005575,GO:0005623,GO:0009289,GO:0042995,GO:0044464 - - - - - - - - - - Fimbrillin_C,P_gingi_FimA PHJFGMMN_01091 449673.BACSTE_02908 9.48e-14 78.2 2FA05@1|root,3429A@2|Bacteria,4P4HT@976|Bacteroidetes,2FM63@200643|Bacteroidia,4AS0S@815|Bacteroidaceae 976|Bacteroidetes S Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 - - - - - - - - - - - - Mfa2 PHJFGMMN_01092 880526.KE386488_gene1471 5.17e-07 62.0 28NA0@1|root,2ZBDV@2|Bacteria,4NJGM@976|Bacteroidetes,2G0Q5@200643|Bacteroidia,22UVZ@171550|Rikenellaceae 976|Bacteroidetes S Domain of unknown function (DUF4906) - - - - - - - - - - - - DUF4906,Fib_succ_major PHJFGMMN_01093 411477.PARMER_01599 5.73e-263 721.0 2DV6Y@1|root,33UEJ@2|Bacteria,4P844@976|Bacteroidetes 976|Bacteroidetes S Major fimbrial subunit protein (FimA) - - - - - - - - - - - - P_gingi_FimA PHJFGMMN_01097 411477.PARMER_01595 0.0 1411.0 COG5545@1|root,COG5545@2|Bacteria,4NG2W@976|Bacteroidetes,2FNU1@200643|Bacteroidia,2300D@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG26639 non supervised orthologous group - - - - - - - - - - - - DUF3874,VirE,VirE_N PHJFGMMN_01098 411477.PARMER_01594 2.11e-89 262.0 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation - - - - - - - - - - - - Bac_DNA_binding PHJFGMMN_01099 411477.PARMER_01593 1.6e-138 390.0 COG2885@1|root,COG2885@2|Bacteria,4NN9C@976|Bacteroidetes,2FPCM@200643|Bacteroidia,2305C@171551|Porphyromonadaceae 976|Bacteroidetes M Protein of unknown function (DUF3575) - - - - - - - - - - - - DUF3575 PHJFGMMN_01100 411477.PARMER_01591 0.0 937.0 COG2885@1|root,COG5010@1|root,COG2885@2|Bacteria,COG5010@2|Bacteria,4NJN8@976|Bacteroidetes,2FMCB@200643|Bacteroidia,22X1J@171551|Porphyromonadaceae 976|Bacteroidetes M Domain of unknown function, B. Theta Gene description (DUF3868) - - - - - - - - - - - - DUF3868,OmpA PHJFGMMN_01102 411477.PARMER_01589 1.02e-149 421.0 COG1564@1|root,COG1564@2|Bacteria,4NPR1@976|Bacteroidetes,2FP1N@200643|Bacteroidia,22ZWI@171551|Porphyromonadaceae 976|Bacteroidetes H Thiamin pyrophosphokinase, catalytic domain thiN - 2.7.6.2 ko:K00949 ko00730,ko01100,map00730,map01100 - R00619 RC00002,RC00017 ko00000,ko00001,ko01000 - - - TPK_catalytic PHJFGMMN_01103 411477.PARMER_01588 2.94e-143 404.0 COG3201@1|root,COG3201@2|Bacteria,4NFJI@976|Bacteroidetes,2FRYG@200643|Bacteroidia,22YI0@171551|Porphyromonadaceae 976|Bacteroidetes H nicotinamide mononucleotide transporter pnuC - - ko:K03811 - - - - ko00000,ko02000 4.B.1.1 - - NMN_transporter PHJFGMMN_01104 411477.PARMER_01587 0.0 1492.0 COG4773@1|root,COG4773@2|Bacteria,4P1XR@976|Bacteroidetes,2G0GZ@200643|Bacteroidia,2323W@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent Receptor Plug Domain - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec PHJFGMMN_01105 411477.PARMER_01586 7.14e-105 303.0 COG0779@1|root,COG0779@2|Bacteria,4NQ32@976|Bacteroidetes,2FSM9@200643|Bacteroidia,22Y41@171551|Porphyromonadaceae 976|Bacteroidetes S Required for maturation of 30S ribosomal subunits rimP GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - ko:K09748 - - - - ko00000,ko03009 - - - DUF150,DUF150_C PHJFGMMN_01106 411477.PARMER_01585 3.85e-297 811.0 COG0195@1|root,COG0195@2|Bacteria,4NFGA@976|Bacteroidetes,2FNJF@200643|Bacteroidia,22WBR@171551|Porphyromonadaceae 976|Bacteroidetes K Participates in both transcription termination and antitermination nusA - - ko:K02600 - - - - ko00000,ko03009,ko03021 - - - KH_5,NusA_N,S1 PHJFGMMN_01107 411477.PARMER_01584 0.0 1660.0 COG0532@1|root,COG0532@2|Bacteria,4NGP3@976|Bacteroidetes,2FM01@200643|Bacteroidia,22VWZ@171551|Porphyromonadaceae 976|Bacteroidetes J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex infB - - ko:K02519 - - - - ko00000,ko03012,ko03029 - - - GTP_EFTU,GTP_EFTU_D2,IF-2,IF2_N PHJFGMMN_01108 411477.PARMER_01583 9.6e-106 306.0 COG1286@1|root,COG1286@2|Bacteria,4NW4E@976|Bacteroidetes,2FUQ5@200643|Bacteroidia,22YQ3@171551|Porphyromonadaceae 976|Bacteroidetes S Colicin V production protein - - - ko:K03558 - - - - ko00000 - - - Colicin_V PHJFGMMN_01109 411477.PARMER_01582 0.0 966.0 COG0719@1|root,COG0719@2|Bacteria,4NFXH@976|Bacteroidetes,2FMUZ@200643|Bacteroidia,22WAX@171551|Porphyromonadaceae 976|Bacteroidetes O Cysteine desulfurase sufB - - ko:K09014 - - - - ko00000 - - - UPF0051 PHJFGMMN_01110 411477.PARMER_01581 7.11e-174 485.0 COG0396@1|root,COG0396@2|Bacteria,4NEMY@976|Bacteroidetes,2FMCD@200643|Bacteroidia,22WQ0@171551|Porphyromonadaceae 976|Bacteroidetes O Part of SUF system involved in inserting iron-sulfur clusters into proteins sufC - - ko:K09013 - - - - ko00000,ko02000 - - - ABC_tran PHJFGMMN_01111 411477.PARMER_01580 0.0 892.0 COG0719@1|root,COG0719@2|Bacteria,4NFPG@976|Bacteroidetes,2FNCN@200643|Bacteroidia,22VW3@171551|Porphyromonadaceae 976|Bacteroidetes O FeS assembly protein SufD sufD - - ko:K09015 - - - - ko00000 - - - UPF0051 PHJFGMMN_01112 411477.PARMER_01579 6.93e-88 258.0 COG0346@1|root,COG0346@2|Bacteria,4NQQA@976|Bacteroidetes,2FKZP@200643|Bacteroidia,22YGJ@171551|Porphyromonadaceae 976|Bacteroidetes E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily gloA - 4.4.1.5 ko:K01759,ko:K03827 ko00620,map00620 - R02530 RC00004,RC00740 ko00000,ko00001,ko01000 - - - Acetyltransf_3,Glyoxalase,Glyoxalase_4 PHJFGMMN_01113 411477.PARMER_01578 7.64e-131 371.0 COG1595@1|root,COG1595@2|Bacteria,4NR7M@976|Bacteroidetes,2FQG7@200643|Bacteroidia,231CR@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_01114 411477.PARMER_01576 0.0 1597.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FNRT@200643|Bacteroidia,22ZMF@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 PHJFGMMN_01115 411477.PARMER_01575 0.0 2245.0 COG0457@1|root,COG0457@2|Bacteria,4NKMF@976|Bacteroidetes,2FXC5@200643|Bacteroidia,231HD@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF5107) - - - - - - - - - - - - DUF5107,TPR_8 PHJFGMMN_01116 411477.PARMER_01574 0.0 1078.0 COG0702@1|root,COG0702@2|Bacteria,4NJQQ@976|Bacteroidetes,2FP4E@200643|Bacteroidia 976|Bacteroidetes GM SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_01117 411477.PARMER_01573 0.0 2177.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_01118 411477.PARMER_01572 1.79e-306 835.0 COG3712@1|root,COG3712@2|Bacteria,4NJBJ@976|Bacteroidetes,2FQUN@200643|Bacteroidia,22YHT@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_01119 411477.PARMER_01571 1.71e-131 374.0 COG1595@1|root,COG1595@2|Bacteria,4NVCP@976|Bacteroidetes,2FTBY@200643|Bacteroidia,22YK6@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_01122 411477.PARMER_01567 5.41e-226 622.0 COG3712@1|root,COG3712@2|Bacteria,4NKTC@976|Bacteroidetes,2FMS6@200643|Bacteroidia,22XRQ@171551|Porphyromonadaceae 976|Bacteroidetes PT COG3712 Fe2 -dicitrate sensor, membrane component - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_01123 411477.PARMER_01566 3.42e-257 707.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_01124 411477.PARMER_01565 0.0 1489.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_01125 411477.PARMER_01564 1.83e-217 600.0 COG0702@1|root,COG0702@2|Bacteria,4NFWH@976|Bacteroidetes,2G0GY@200643|Bacteroidia 976|Bacteroidetes GM SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_01126 411477.PARMER_01563 1.52e-148 417.0 COG0702@1|root,COG0702@2|Bacteria,4NFWH@976|Bacteroidetes,2G0GY@200643|Bacteroidia 976|Bacteroidetes GM SusD family - - - - - - - - - - - - SusD-like_3,SusD_RagB PHJFGMMN_01127 411477.PARMER_01562 0.0 1386.0 COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FNFR@200643|Bacteroidia,22XGQ@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - CHB_HEX,CHB_HEX_C,Glyco_hydro_20,Glyco_hydro_20b PHJFGMMN_01129 411477.PARMER_01561 0.0 1838.0 COG3250@1|root,COG3250@2|Bacteria,4NHRH@976|Bacteroidetes,2FMR5@200643|Bacteroidia,22ZST@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 2, TIM barrel domain lacZ_17 - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N PHJFGMMN_01130 411477.PARMER_01560 1.41e-199 551.0 COG2273@1|root,COG2273@2|Bacteria,4NGMJ@976|Bacteroidetes,2FQ32@200643|Bacteroidia,22XRY@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 16 bglA_1 - - - - - - - - - - - Glyco_hydro_16 PHJFGMMN_01131 411477.PARMER_01559 6.89e-299 814.0 COG0520@1|root,COG0520@2|Bacteria,4NDUB@976|Bacteroidetes,2FPF8@200643|Bacteroidia,22WTU@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine sufS - 2.8.1.7,4.4.1.16 ko:K11717 ko00450,ko01100,map00450,map01100 - R03599,R11528 RC00961,RC01789,RC02313 ko00000,ko00001,ko01000 - - - Aminotran_5 PHJFGMMN_01132 411477.PARMER_01558 4.39e-97 281.0 COG5652@1|root,COG5652@2|Bacteria,4NXUQ@976|Bacteroidetes,2FSFT@200643|Bacteroidia,22YYX@171551|Porphyromonadaceae 976|Bacteroidetes S VanZ like family fjo27 - - - - - - - - - - - VanZ PHJFGMMN_01133 411477.PARMER_01557 1.21e-146 412.0 COG0164@1|root,COG0164@2|Bacteria,4NGVR@976|Bacteroidetes,2FMS7@200643|Bacteroidia,22WJC@171551|Porphyromonadaceae 976|Bacteroidetes L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids rnhB GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 ko:K03470 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - RNase_HII PHJFGMMN_01134 411477.PARMER_01555 1.62e-96 281.0 COG2166@1|root,COG2166@2|Bacteria,4NM9N@976|Bacteroidetes,2FSRV@200643|Bacteroidia,22XYC@171551|Porphyromonadaceae 976|Bacteroidetes S Fe-S metabolism sufE - - ko:K02426 - - - - ko00000 - - - SufE PHJFGMMN_01135 411477.PARMER_01554 1.94e-248 681.0 COG2234@1|root,COG2234@2|Bacteria,4NG2A@976|Bacteroidetes,2FN1C@200643|Bacteroidia,22X6Y@171551|Porphyromonadaceae 976|Bacteroidetes S Glutamine cyclotransferase - - - - - - - - - - - - Peptidase_M28 PHJFGMMN_01136 411477.PARMER_01553 0.0 1182.0 COG2071@1|root,COG2355@1|root,COG2071@2|Bacteria,COG2355@2|Bacteria,4NEBG@976|Bacteroidetes,2FMPY@200643|Bacteroidia,22X2P@171551|Porphyromonadaceae 976|Bacteroidetes E Membrane dipeptidase (Peptidase family M19) - - 3.4.13.19 ko:K01273,ko:K01274 - - - - ko00000,ko00537,ko01000,ko01002,ko04147 - - - Peptidase_C26,Peptidase_M19 PHJFGMMN_01137 411477.PARMER_01552 0.0 1276.0 COG0187@1|root,COG0187@2|Bacteria,4NE0P@976|Bacteroidetes,2FPG7@200643|Bacteroidia,22WA1@171551|Porphyromonadaceae 976|Bacteroidetes L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner gyrB - 5.99.1.3 ko:K02470 - - - - ko00000,ko01000,ko03032,ko03400 - - - DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim PHJFGMMN_01139 411477.PARMER_01549 1.94e-50 160.0 COG0268@1|root,COG0268@2|Bacteria,4NSB1@976|Bacteroidetes,2FTW4@200643|Bacteroidia,22YCU@171551|Porphyromonadaceae 976|Bacteroidetes J Binds directly to 16S ribosomal RNA rpsT - - ko:K02968 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S20p PHJFGMMN_01141 411477.PARMER_01546 8.46e-80 239.0 2CH3Z@1|root,32RP9@2|Bacteria,4NQUA@976|Bacteroidetes,2FS8T@200643|Bacteroidia,22YJ2@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF2721) - - - - - - - - - - - - DUF2721 PHJFGMMN_01142 999419.HMPREF1077_00242 7.98e-166 464.0 COG1381@1|root,COG1381@2|Bacteria,4NIBQ@976|Bacteroidetes,2FPGE@200643|Bacteroidia,22XU1@171551|Porphyromonadaceae 976|Bacteroidetes L Involved in DNA repair and RecF pathway recombination recO - - ko:K03584 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - RecO_C,RecO_N PHJFGMMN_01144 411477.PARMER_01543 7.22e-106 304.0 2C6X9@1|root,34AQQ@2|Bacteria,4P6US@976|Bacteroidetes,2G1S8@200643|Bacteroidia,2316B@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01145 1122931.AUAE01000005_gene3397 1.02e-86 270.0 291SX@1|root,2ZPCV@2|Bacteria,4P7IG@976|Bacteroidetes,2FZBN@200643|Bacteroidia 976|Bacteroidetes S Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 - - - - - - - - - - - - Mfa2 PHJFGMMN_01146 411477.PARMER_01541 2.57e-256 700.0 COG1082@1|root,COG1082@2|Bacteria,4NGBE@976|Bacteroidetes,2FNN2@200643|Bacteroidia,22ZAK@171551|Porphyromonadaceae 976|Bacteroidetes G AP endonuclease family 2 C terminus - - - - - - - - - - - - AP_endonuc_2,AP_endonuc_2_N PHJFGMMN_01147 411477.PARMER_01540 0.0 1636.0 COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes,2FM1K@200643|Bacteroidia,22X66@171551|Porphyromonadaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug PHJFGMMN_01149 411477.PARMER_01538 0.0 2135.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FWW6@200643|Bacteroidia,22X0F@171551|Porphyromonadaceae 976|Bacteroidetes H CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_01150 411477.PARMER_01537 0.0 1372.0 COG0614@1|root,COG0614@2|Bacteria,4NEF0@976|Bacteroidetes,2FNDC@200643|Bacteroidia,2303Y@171551|Porphyromonadaceae 976|Bacteroidetes P Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_01151 999419.HMPREF1077_00260 4.57e-289 793.0 COG3511@1|root,COG3511@2|Bacteria,4NXFA@976|Bacteroidetes,2FXPI@200643|Bacteroidia,22YX1@171551|Porphyromonadaceae 976|Bacteroidetes M Domain of unknown function (DUF1735) - - - - - - - - - - - - DUF1735,F5_F8_type_C PHJFGMMN_01152 999419.HMPREF1077_00285 1.12e-10 61.6 COG0745@1|root,COG0745@2|Bacteria,4NTDZ@976|Bacteroidetes,2FS9E@200643|Bacteroidia 976|Bacteroidetes T Transcriptional regulatory protein, C terminal - - - - - - - - - - - - Response_reg,Trans_reg_C PHJFGMMN_01153 411477.PARMER_01532 3.6e-211 583.0 COG0673@1|root,COG0673@2|Bacteria,4NGP9@976|Bacteroidetes,2FMTZ@200643|Bacteroidia,22WG9@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate ddh - 1.4.1.16 ko:K03340 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 M00526 R02755 RC00006 ko00000,ko00001,ko00002,ko01000 - - - CoA_binding,DAPDH_C,GFO_IDH_MocA,Semialdhyde_dh PHJFGMMN_01154 411477.PARMER_01531 2.1e-213 587.0 COG0682@1|root,COG0682@2|Bacteria,4NFP7@976|Bacteroidetes,2FMXU@200643|Bacteroidia,22WIT@171551|Porphyromonadaceae 976|Bacteroidetes M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins lgt - - - - - - - - - - - LGT PHJFGMMN_01155 411477.PARMER_01530 1.96e-295 805.0 COG0426@1|root,COG0426@2|Bacteria,4NGI2@976|Bacteroidetes,2FMWU@200643|Bacteroidia,22W6S@171551|Porphyromonadaceae 976|Bacteroidetes C Metallo-beta-lactamase domain protein fprA - 1.6.3.4 ko:K22405 - - - - ko00000,ko01000 - - - Flavodoxin_1,Flavodoxin_5,Lactamase_B,Lactamase_B_2 PHJFGMMN_01156 411477.PARMER_01529 1.7e-195 541.0 COG0363@1|root,COG0363@2|Bacteria,4NHF8@976|Bacteroidetes,2FN1D@200643|Bacteroidia,22W1C@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion nagB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 3.5.99.6 ko:K02564 ko00520,ko01100,map00520,map01100 - R00765 RC00163 ko00000,ko00001,ko01000 - - - Glucosamine_iso PHJFGMMN_01157 411477.PARMER_01528 1.45e-55 173.0 COG1729@1|root,COG1729@2|Bacteria,4NYBX@976|Bacteroidetes,2G0GX@200643|Bacteroidia,231ES@171551|Porphyromonadaceae 976|Bacteroidetes S TPR repeat - - - - - - - - - - - - TPR_1,TPR_11,TPR_16,TPR_2 PHJFGMMN_01158 411477.PARMER_01526 0.0 1503.0 COG0550@1|root,COG0550@2|Bacteria,4NF9S@976|Bacteroidetes,2FMSF@200643|Bacteroidia,22WGN@171551|Porphyromonadaceae 976|Bacteroidetes L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone topA - 5.99.1.2 ko:K03168 - - - - ko00000,ko01000,ko03032,ko03400 - - - Topoisom_bac,Toprim,Toprim_C_rpt PHJFGMMN_01160 411477.PARMER_01523 0.0 1176.0 COG0018@1|root,COG0018@2|Bacteria,4NE7Q@976|Bacteroidetes,2FN06@200643|Bacteroidia,22VUX@171551|Porphyromonadaceae 976|Bacteroidetes J Arginyl-tRNA synthetase argS - 6.1.1.19 ko:K01887 ko00970,map00970 M00359,M00360 R03646 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - Arg_tRNA_synt_N,DALR_1,tRNA-synt_1d PHJFGMMN_01161 411477.PARMER_01522 1.01e-52 166.0 COG0776@1|root,COG0776@2|Bacteria,4NSK6@976|Bacteroidetes,2FTWW@200643|Bacteroidia,22YD0@171551|Porphyromonadaceae 976|Bacteroidetes L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions hupB - - ko:K03530 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding PHJFGMMN_01162 411477.PARMER_01521 9.77e-169 472.0 COG0705@1|root,COG0705@2|Bacteria,4NIYR@976|Bacteroidetes,2FNMJ@200643|Bacteroidia,22Y0S@171551|Porphyromonadaceae 976|Bacteroidetes S membrane - - 3.4.21.105 ko:K09650 - - - - ko00000,ko01000,ko01002,ko03029 - - - Rhomboid PHJFGMMN_01163 411477.PARMER_01520 2.14e-200 556.0 COG0705@1|root,COG0705@2|Bacteria,4NGVJ@976|Bacteroidetes,2FMGW@200643|Bacteroidia,22WSS@171551|Porphyromonadaceae 976|Bacteroidetes S Rhomboid family - - - - - - - - - - - - Rhomboid PHJFGMMN_01164 411477.PARMER_01519 1.82e-276 755.0 COG3568@1|root,COG3568@2|Bacteria,4NGUV@976|Bacteroidetes,2FNIX@200643|Bacteroidia,22WTP@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease Exonuclease phosphatase family protein - - - - - - - - - - - - Exo_endo_phos PHJFGMMN_01165 999419.HMPREF1077_00299 8.95e-121 345.0 2E80C@1|root,332EN@2|Bacteria,4NX72@976|Bacteroidetes,2FUR6@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4468) with TBP-like fold - - - - - - - - - - - - DUF4468 PHJFGMMN_01166 411477.PARMER_01517 2.29e-227 627.0 2EAXQ@1|root,334YS@2|Bacteria,4NI39@976|Bacteroidetes,2FNTF@200643|Bacteroidia,22XQP@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4468) with TBP-like fold - - - ko:K03646 - - - - ko00000,ko02000 2.C.1.2 - - DUF4468 PHJFGMMN_01167 411477.PARMER_01516 0.0 1871.0 COG0341@1|root,COG0342@1|root,COG0341@2|Bacteria,COG0342@2|Bacteria,4NE1X@976|Bacteroidetes,2FMPX@200643|Bacteroidia,22WE8@171551|Porphyromonadaceae 976|Bacteroidetes U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA secD - - ko:K03072,ko:K12257 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 2.A.6.4,3.A.5.2,3.A.5.7 - - SecD_SecF,Sec_GG PHJFGMMN_01168 411477.PARMER_01515 0.0 1348.0 COG2987@1|root,COG2987@2|Bacteria,4NF2P@976|Bacteroidetes,2FNQK@200643|Bacteroidia,22X3D@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate hutU - 4.2.1.49 ko:K01712 ko00340,ko01100,map00340,map01100 M00045 R02914 RC00804 ko00000,ko00001,ko00002,ko01000 - - - Urocanase,Urocanase_C,Urocanase_N PHJFGMMN_01169 411477.PARMER_01514 2.86e-214 592.0 COG3643@1|root,COG3643@2|Bacteria,4NFE3@976|Bacteroidetes,2FMWT@200643|Bacteroidia,22WZC@171551|Porphyromonadaceae 976|Bacteroidetes E Glutamate formiminotransferase ftcD - 2.1.2.5,4.3.1.4 ko:K00603,ko:K13990 ko00340,ko00670,ko01100,map00340,map00670,map01100 - R02287,R02302,R03189 RC00165,RC00221,RC00223,RC00688,RC00870 ko00000,ko00001,ko01000,ko03036,ko04147 - - - FTCD,FTCD_C,FTCD_N PHJFGMMN_01170 411477.PARMER_01513 3.71e-300 818.0 COG1228@1|root,COG1228@2|Bacteria,4NE6C@976|Bacteroidetes,2FNW2@200643|Bacteroidia,22W99@171551|Porphyromonadaceae 976|Bacteroidetes Q Imidazolone-5-propionate hydrolase hutI - 3.5.2.7 ko:K01468 ko00340,ko01100,map00340,map01100 M00045 R02288 RC00683 ko00000,ko00001,ko00002,ko01000 - - - Amidohydro_1,Amidohydro_3 PHJFGMMN_01171 411477.PARMER_01512 3.52e-136 387.0 COG3404@1|root,COG3404@2|Bacteria,4NN2J@976|Bacteroidetes,2FPSN@200643|Bacteroidia,22XZX@171551|Porphyromonadaceae 976|Bacteroidetes E Methenyltetrahydrofolate cyclohydrolase fchA - - - - - - - - - - - FTCD_C,Peptidase_M78 PHJFGMMN_01172 411477.PARMER_01511 0.0 979.0 COG2986@1|root,COG2986@2|Bacteria,4NE0D@976|Bacteroidetes,2FMCF@200643|Bacteroidia,22X1Y@171551|Porphyromonadaceae 976|Bacteroidetes E Histidine ammonia-lyase hutH - 4.3.1.3 ko:K01745 ko00340,ko01100,map00340,map01100 M00045 R01168 RC00361 ko00000,ko00001,ko00002,ko01000 - - - Lyase_aromatic PHJFGMMN_01173 411477.PARMER_01509 7.26e-265 725.0 COG0489@1|root,COG0489@2|Bacteria,4NF5I@976|Bacteroidetes,2FKYK@200643|Bacteroidia,22WYQ@171551|Porphyromonadaceae 976|Bacteroidetes D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP mrp - - ko:K03593 - - - - ko00000,ko03029,ko03036 - - - FeS_assembly_P,ParA PHJFGMMN_01174 411477.PARMER_01508 6.17e-189 523.0 COG0220@1|root,COG0220@2|Bacteria,4NG4V@976|Bacteroidetes,2FN8Z@200643|Bacteroidia,22WBB@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA trmB GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 ko:K03439 - - - - ko00000,ko01000,ko03016 - - - Methyltransf_4 PHJFGMMN_01178 411477.PARMER_01504 5.84e-226 623.0 COG0524@1|root,COG0524@2|Bacteria,4NIHI@976|Bacteroidetes,2FPRJ@200643|Bacteroidia,22WDP@171551|Porphyromonadaceae 976|Bacteroidetes G pfkB family carbohydrate kinase - - - - - - - - - - - - PfkB PHJFGMMN_01179 411477.PARMER_01503 0.0 1105.0 COG0793@1|root,COG0793@2|Bacteria,4NDWU@976|Bacteroidetes,2FM0W@200643|Bacteroidia,22W1I@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the peptidase S41A family prc - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - PDZ,PDZ_2,Peptidase_S41 PHJFGMMN_01180 411477.PARMER_01502 7.98e-274 749.0 COG1994@1|root,COG1994@2|Bacteria,4P0HH@976|Bacteroidetes,2FQBX@200643|Bacteroidia 976|Bacteroidetes S Peptidase M50 - - - - - - - - - - - - - PHJFGMMN_01181 411477.PARMER_01501 2.31e-280 765.0 COG1408@1|root,COG1408@2|Bacteria,4NFCH@976|Bacteroidetes,2FQ9F@200643|Bacteroidia,22XNV@171551|Porphyromonadaceae 976|Bacteroidetes S Ser Thr phosphatase family protein - - - ko:K07098 - - - - ko00000 - - - Metallophos PHJFGMMN_01182 411477.PARMER_01500 5.77e-268 733.0 COG1408@1|root,COG1408@2|Bacteria,4NFCH@976|Bacteroidetes,2FQ9F@200643|Bacteroidia,22WWB@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase superfamily domain - - - ko:K07098 - - - - ko00000 - - - Metallophos PHJFGMMN_01183 411477.PARMER_01499 8.86e-93 270.0 COG3177@1|root,COG3177@2|Bacteria 2|Bacteria D Filamentation induced by cAMP protein fic - - - - - - - - - - - - Fic PHJFGMMN_01184 411477.PARMER_01498 0.0 1841.0 COG3250@1|root,COG3250@2|Bacteria,4NE7H@976|Bacteroidetes,2FNT8@200643|Bacteroidia,22VUE@171551|Porphyromonadaceae 976|Bacteroidetes G COG COG3250 Beta-galactosidase beta-glucuronidase csxA_4 - - - - - - - - - - - Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N PHJFGMMN_01185 411477.PARMER_01497 7.85e-290 789.0 COG2152@1|root,COG2152@2|Bacteria,4NG7B@976|Bacteroidetes,2FN5N@200643|Bacteroidia,22X9U@171551|Porphyromonadaceae 976|Bacteroidetes G beta-1,4-mannooligosaccharide phosphorylase - - 3.2.1.197 ko:K21065 - - R11544 RC00049 ko00000,ko01000 - - - Glyco_hydro_130 PHJFGMMN_01186 999419.HMPREF1077_00317 1.45e-159 447.0 28JK0@1|root,30UFS@2|Bacteria,4NPRQ@976|Bacteroidetes,2FSUV@200643|Bacteroidia,22Z99@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3823) - - - - - - - - - - - - DUF3823 PHJFGMMN_01187 411477.PARMER_01495 0.0 1260.0 COG1435@1|root,COG1435@2|Bacteria,4NFEY@976|Bacteroidetes,2FPHM@200643|Bacteroidia,22ZE2@171551|Porphyromonadaceae 976|Bacteroidetes F SusD family - - - - - - - - - - - - SusD-like_3,SusD_RagB PHJFGMMN_01188 411477.PARMER_01494 0.0 2219.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FWW6@200643|Bacteroidia,22X8G@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_01189 411477.PARMER_01493 3.01e-224 617.0 COG3712@1|root,COG3712@2|Bacteria,4NKTC@976|Bacteroidetes,2FMS6@200643|Bacteroidia,22XRQ@171551|Porphyromonadaceae 976|Bacteroidetes PT COG3712 Fe2 -dicitrate sensor, membrane component - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_01190 411477.PARMER_01259 3.24e-134 381.0 COG1595@1|root,COG1595@2|Bacteria,4NR7M@976|Bacteroidetes,2FRPH@200643|Bacteroidia,22Y7V@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_01191 411477.PARMER_01489 5.9e-144 406.0 COG0778@1|root,COG0778@2|Bacteria,4NP0K@976|Bacteroidetes,2FPFS@200643|Bacteroidia,22XYX@171551|Porphyromonadaceae 976|Bacteroidetes C Nitroreductase family - - - - - - - - - - - - Nitroreductase PHJFGMMN_01192 411477.PARMER_01488 0.0 1692.0 COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes,2FM1K@200643|Bacteroidia,22XI8@171551|Porphyromonadaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug PHJFGMMN_01193 411477.PARMER_01487 0.0 1412.0 COG3250@1|root,COG3250@2|Bacteria,4NEDF@976|Bacteroidetes,2FMTQ@200643|Bacteroidia,22WYP@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 2 family - - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N PHJFGMMN_01194 411477.PARMER_01485 0.0 1073.0 COG3119@1|root,COG3119@2|Bacteria,4NGX1@976|Bacteroidetes,2FMSX@200643|Bacteroidia,22WIH@171551|Porphyromonadaceae 976|Bacteroidetes P Type I phosphodiesterase / nucleotide pyrophosphatase aslA - - - - - - - - - - - Sulfatase PHJFGMMN_01195 411477.PARMER_01484 0.0 997.0 COG3119@1|root,COG3119@2|Bacteria,4NFGI@976|Bacteroidetes,2FMUC@200643|Bacteroidia,22ZPT@171551|Porphyromonadaceae 976|Bacteroidetes P Sulfatase - - - - - - - - - - - - Sulfatase PHJFGMMN_01196 411477.PARMER_01483 0.0 1181.0 COG0614@1|root,COG0614@2|Bacteria,4NIFM@976|Bacteroidetes,2G3HP@200643|Bacteroidia,22XNI@171551|Porphyromonadaceae 976|Bacteroidetes P Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_01197 411477.PARMER_01482 0.0 2126.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FW4E@200643|Bacteroidia,22XIY@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_01198 411477.PARMER_01477 0.0 1335.0 COG4225@1|root,COG4225@2|Bacteria,4NG6C@976|Bacteroidetes,2FNB0@200643|Bacteroidia,22WUT@171551|Porphyromonadaceae 976|Bacteroidetes S Heparinase II/III-like protein - - - - - - - - - - - - Hepar_II_III PHJFGMMN_01199 411477.PARMER_01476 3.03e-297 810.0 COG1331@1|root,COG1331@2|Bacteria,4PKHP@976|Bacteroidetes,2G06V@200643|Bacteroidia,22X55@171551|Porphyromonadaceae 976|Bacteroidetes O Glycosyl Hydrolase Family 88 - - - - - - - - - - - - Glyco_hydro_88 PHJFGMMN_01200 411477.PARMER_01474 4.11e-222 611.0 COG1524@1|root,COG1524@2|Bacteria,4NIUS@976|Bacteroidetes,2FP4Q@200643|Bacteroidia,22W5X@171551|Porphyromonadaceae 976|Bacteroidetes S Metalloenzyme superfamily - - - - - - - - - - - - CHB_HEX_C_1,Fn3_assoc,PA14,Phosphodiest PHJFGMMN_01201 411477.PARMER_01472 0.0 2523.0 COG0745@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,2FWSR@200643|Bacteroidia,231P1@171551|Porphyromonadaceae 976|Bacteroidetes T helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y PHJFGMMN_01202 411477.PARMER_01473 2.9e-231 638.0 COG0609@1|root,COG0609@2|Bacteria,4NEDU@976|Bacteroidetes,2FNDK@200643|Bacteroidia,22WJI@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily - - - ko:K02015 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - FecCD PHJFGMMN_01203 411477.PARMER_01471 8.31e-253 693.0 COG1120@1|root,COG1120@2|Bacteria,4NG1Q@976|Bacteroidetes,2FMCI@200643|Bacteroidia,22WS6@171551|Porphyromonadaceae 976|Bacteroidetes HP ATP-binding protein - - 3.6.3.34 ko:K02013 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.14 - - ABC_tran PHJFGMMN_01204 411477.PARMER_01470 0.0 872.0 COG0534@1|root,COG0534@2|Bacteria,4NDUF@976|Bacteroidetes,2FMX6@200643|Bacteroidia,22WP6@171551|Porphyromonadaceae 976|Bacteroidetes V Multidrug transporter MatE - - - - - - - - - - - - MatE PHJFGMMN_01205 411477.PARMER_01469 1.23e-112 325.0 2924H@1|root,2ZPPH@2|Bacteria,4NNST@976|Bacteroidetes,2FR7C@200643|Bacteroidia,22YFV@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4251) - - - - - - - - - - - - DUF4251 PHJFGMMN_01206 411477.PARMER_01468 4.32e-87 256.0 COG0234@1|root,COG0234@2|Bacteria,4NRE1@976|Bacteroidetes,2FTDY@200643|Bacteroidia,230V1@171551|Porphyromonadaceae 976|Bacteroidetes O Chaperonin 10 Kd subunit - - - - - - - - - - - - Cpn10 PHJFGMMN_01207 411477.PARMER_01467 1.14e-186 519.0 COG0543@1|root,COG0543@2|Bacteria,4NJ0I@976|Bacteroidetes,2FNBW@200643|Bacteroidia,22WH8@171551|Porphyromonadaceae 976|Bacteroidetes C Ferredoxin-NADP reductase gltD - 1.18.1.2,1.19.1.1 ko:K00528 - - R10159 - ko00000,ko01000 - - - DHODB_Fe-S_bind,FAD_binding_6,NAD_binding_1 PHJFGMMN_01208 411477.PARMER_01466 0.0 946.0 COG0493@1|root,COG0493@2|Bacteria,4NG9R@976|Bacteroidetes,2FMJF@200643|Bacteroidia,22XDN@171551|Porphyromonadaceae 976|Bacteroidetes E catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation gltA - 1.3.1.1,1.4.1.13,1.4.1.14 ko:K00266,ko:K17722 ko00240,ko00250,ko00410,ko00770,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00240,map00250,map00410,map00770,map00910,map01100,map01110,map01120,map01130,map01230 M00046 R00093,R00114,R00248,R00977,R01414,R11026 RC00006,RC00010,RC00072,RC00123,RC02799 ko00000,ko00001,ko00002,ko01000 - - - DHODB_Fe-S_bind,FAD_binding_6,Fer4_20,NAD_binding_1,Pyr_redox_2 PHJFGMMN_01209 411477.PARMER_01465 0.0 1425.0 COG0614@1|root,COG0614@2|Bacteria,4NEF0@976|Bacteroidetes,2FNDC@200643|Bacteroidia,2323V@171551|Porphyromonadaceae 976|Bacteroidetes P Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_01210 411477.PARMER_01464 0.0 2161.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,22W9I@171551|Porphyromonadaceae 976|Bacteroidetes P CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_01214 411477.PARMER_01456 1.78e-111 319.0 COG2146@1|root,COG2146@2|Bacteria,4NWQ5@976|Bacteroidetes,2FUP8@200643|Bacteroidia,22YSX@171551|Porphyromonadaceae 976|Bacteroidetes P nitrite reductase [NAD(P)H] activity - - - - - - - - - - - - Rieske PHJFGMMN_01215 411477.PARMER_01455 0.0 876.0 COG0165@1|root,COG0165@2|Bacteria,4NFCY@976|Bacteroidetes,2FPNB@200643|Bacteroidia,22WJN@171551|Porphyromonadaceae 976|Bacteroidetes E argininosuccinate lyase argH GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 M00029,M00844,M00845 R01086 RC00445,RC00447 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Lyase_1 PHJFGMMN_01216 411477.PARMER_01454 5.05e-93 271.0 COG3427@1|root,COG3427@2|Bacteria,4NT9F@976|Bacteroidetes,2G2KQ@200643|Bacteroidia,231XE@171551|Porphyromonadaceae 976|Bacteroidetes E oxidoreductase activity, acting on CH-OH group of donors - - - - - - - - - - - - Polyketide_cyc2 PHJFGMMN_01217 411477.PARMER_01453 1.51e-147 416.0 COG0461@1|root,COG0461@2|Bacteria,4NEF8@976|Bacteroidetes,2FMTB@200643|Bacteroidia,22XEK@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) pyrE - 2.4.2.10,4.1.1.23 ko:K00762,ko:K13421 ko00240,ko00983,ko01100,map00240,map00983,map01100 M00051 R00965,R01870,R08231 RC00063,RC00409,RC00611 ko00000,ko00001,ko00002,ko01000 - - - OMPdecase,Pribosyltran PHJFGMMN_01218 999419.HMPREF1077_00351 1.44e-158 445.0 COG1040@1|root,COG1040@2|Bacteria,4NNI1@976|Bacteroidetes,2FP14@200643|Bacteroidia,22XYS@171551|Porphyromonadaceae 976|Bacteroidetes S Phosphoribosyl transferase domain comF - 2.4.2.14 ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048 R01072 RC00010,RC02724,RC02752 ko00000,ko00001,ko00002,ko01000,ko01002 - - - Pribosyltran PHJFGMMN_01219 411477.PARMER_01451 3.49e-108 312.0 COG2137@1|root,COG2137@2|Bacteria,4NSAS@976|Bacteroidetes,2FS4X@200643|Bacteroidia,22YE0@171551|Porphyromonadaceae 976|Bacteroidetes S Modulates RecA activity recX - - ko:K03565 - - - - ko00000,ko03400 - - - RecX PHJFGMMN_01220 411477.PARMER_01450 2.78e-200 555.0 COG2890@1|root,COG2890@2|Bacteria,4NDZB@976|Bacteroidetes,2FM3H@200643|Bacteroidia,22XPT@171551|Porphyromonadaceae 976|Bacteroidetes J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif prmC GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 ko:K02493 - - R10806 RC00003,RC03279 ko00000,ko01000,ko03012 - - - MTS PHJFGMMN_01221 411477.PARMER_01449 2.9e-251 691.0 COG0117@1|root,COG1985@1|root,COG0117@2|Bacteria,COG1985@2|Bacteria,4NFJE@976|Bacteroidetes,2FM4R@200643|Bacteroidia,22WQZ@171551|Porphyromonadaceae 976|Bacteroidetes H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate ribD - 1.1.1.193,3.5.4.26 ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 M00125 R03458,R03459 RC00204,RC00933 ko00000,ko00001,ko00002,ko01000 - - - RibD_C,dCMP_cyt_deam_1 PHJFGMMN_01222 411477.PARMER_01448 0.0 941.0 COG1621@1|root,COG1621@2|Bacteria,4NTHV@976|Bacteroidetes,2FPZA@200643|Bacteroidia,22YEN@171551|Porphyromonadaceae 976|Bacteroidetes G COG NOG27066 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_01223 411477.PARMER_01447 1.11e-180 501.0 COG3637@1|root,COG3637@2|Bacteria,4NF6B@976|Bacteroidetes,2FQWF@200643|Bacteroidia,22XT6@171551|Porphyromonadaceae 976|Bacteroidetes M Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - - - - - - - - - - OMP_b-brl PHJFGMMN_01224 411477.PARMER_01446 6.35e-175 488.0 COG0020@1|root,COG0020@2|Bacteria,4NF2B@976|Bacteroidetes,2FMM4@200643|Bacteroidia,22WWT@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids uppS GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 ko:K00806 ko00900,ko01110,map00900,map01110 - R06447 RC00279,RC02839 ko00000,ko00001,ko01000,ko01006 - - - Prenyltransf PHJFGMMN_01225 411477.PARMER_01445 0.0 1744.0 COG4775@1|root,COG4775@2|Bacteria,4NE6Z@976|Bacteroidetes,2FM76@200643|Bacteroidia,22WYU@171551|Porphyromonadaceae 976|Bacteroidetes M membrane yaeT - - ko:K07277 - - - - ko00000,ko02000,ko03029 1.B.33 - - Bac_surface_Ag,POTRA PHJFGMMN_01226 411477.PARMER_01443 3.43e-112 323.0 COG2825@1|root,COG2825@2|Bacteria,4NH46@976|Bacteroidetes,2FQDW@200643|Bacteroidia,22XM9@171551|Porphyromonadaceae 976|Bacteroidetes M membrane ompH - - ko:K06142 - - - - ko00000 - - - OmpH PHJFGMMN_01227 411477.PARMER_01442 2.66e-88 262.0 COG2825@1|root,COG2825@2|Bacteria,4NSCM@976|Bacteroidetes,2FQ15@200643|Bacteroidia,2321M@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein (OmpH-like) ompH - - ko:K06142 - - - - ko00000 - - - OmpH PHJFGMMN_01228 411477.PARMER_01441 1.58e-204 565.0 COG0796@1|root,COG0796@2|Bacteria,4NG1C@976|Bacteroidetes,2FKYW@200643|Bacteroidia,22WDQ@171551|Porphyromonadaceae 976|Bacteroidetes M Provides the (R)-glutamate required for cell wall biosynthesis murI - 5.1.1.3 ko:K01776 ko00471,ko01100,map00471,map01100 - R00260 RC00302 ko00000,ko00001,ko01000,ko01011 - - - Asp_Glu_race PHJFGMMN_01229 411477.PARMER_01440 9.61e-84 247.0 COG3304@1|root,COG3304@2|Bacteria,4NQSS@976|Bacteroidetes,2FTAX@200643|Bacteroidia,22Y70@171551|Porphyromonadaceae 976|Bacteroidetes S Inner membrane component domain yccF - - - - - - - - - - - YccF PHJFGMMN_01230 411477.PARMER_01439 3.46e-305 831.0 COG0739@1|root,COG0739@2|Bacteria,4NECF@976|Bacteroidetes,2FQ2Q@200643|Bacteroidia,22X4J@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family M23 - - - - - - - - - - - - Peptidase_M23 PHJFGMMN_01233 411477.PARMER_01434 8.35e-94 274.0 COG3187@1|root,COG3187@2|Bacteria,4NRFE@976|Bacteroidetes,2FQEM@200643|Bacteroidia,22YMY@171551|Porphyromonadaceae 976|Bacteroidetes O META domain - - - - - - - - - - - - META PHJFGMMN_01234 411477.PARMER_01433 3.77e-102 295.0 COG3187@1|root,COG3187@2|Bacteria,4NRFE@976|Bacteroidetes,2FQEM@200643|Bacteroidia,22YMY@171551|Porphyromonadaceae 976|Bacteroidetes O META domain - - - - - - - - - - - - META PHJFGMMN_01235 411477.PARMER_01432 0.0 1231.0 COG0642@1|root,COG5002@1|root,COG2205@2|Bacteria,COG5002@2|Bacteria,4NKBC@976|Bacteroidetes,2FNE0@200643|Bacteroidia,22WMG@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c,HisKA PHJFGMMN_01236 411477.PARMER_01431 7.25e-300 816.0 COG3876@1|root,COG3876@2|Bacteria,4NEXD@976|Bacteroidetes,2FN5Q@200643|Bacteroidia,22WI7@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1343) - - - - - - - - - - - - DUF1343 PHJFGMMN_01237 411477.PARMER_01430 3.04e-133 377.0 COG2206@1|root,COG2206@2|Bacteria,4PKEV@976|Bacteroidetes,2G3ER@200643|Bacteroidia,22XYR@171551|Porphyromonadaceae 976|Bacteroidetes T HDIG domain protein - - - ko:K06950 - - - - ko00000 - - - HD PHJFGMMN_01238 411477.PARMER_01429 0.0 1858.0 COG1452@1|root,COG1452@2|Bacteria,4NFWD@976|Bacteroidetes,2FM9F@200643|Bacteroidia,22W8Y@171551|Porphyromonadaceae 976|Bacteroidetes M Psort location OuterMembrane, score - - - - - - - - - - - - - PHJFGMMN_01239 411477.PARMER_01428 1.84e-165 461.0 COG0692@1|root,COG0692@2|Bacteria,4NE2B@976|Bacteroidetes,2FM57@200643|Bacteroidia,22WGA@171551|Porphyromonadaceae 976|Bacteroidetes L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine ung GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360 3.2.2.27 ko:K03648 ko03410,ko05340,map03410,map05340 - - - ko00000,ko00001,ko01000,ko03400 - - - UDG PHJFGMMN_01240 411477.PARMER_01427 4.29e-254 696.0 COG2502@1|root,COG2502@2|Bacteria,4NFZA@976|Bacteroidetes,2FMP0@200643|Bacteroidia,22W9D@171551|Porphyromonadaceae 976|Bacteroidetes E aspartate--ammonia ligase asnA - 6.3.1.1 ko:K01914 ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230 - R00483 RC00010 ko00000,ko00001,ko01000 - - - AsnA PHJFGMMN_01242 411477.PARMER_01423 1.32e-97 284.0 COG2259@1|root,COG2259@2|Bacteria,4NSBJ@976|Bacteroidetes,2FSQZ@200643|Bacteroidia,22YE6@171551|Porphyromonadaceae 976|Bacteroidetes S DoxX - - - ko:K15977 - - - - ko00000 - - - DoxX PHJFGMMN_01246 411477.PARMER_01416 0.0 887.0 COG0015@1|root,COG0015@2|Bacteria,4NFY8@976|Bacteroidetes,2FMYF@200643|Bacteroidia,22X1N@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily purB - 4.3.2.2 ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048,M00049 R01083,R04559 RC00379,RC00444,RC00445 ko00000,ko00001,ko00002,ko01000 - - - ADSL_C,ASL_C,Lyase_1 PHJFGMMN_01247 999419.HMPREF1077_00375 2.09e-271 752.0 COG1187@1|root,COG1187@2|Bacteria,4NEE1@976|Bacteroidetes,2FP7M@200643|Bacteroidia,22WKX@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the pseudouridine synthase RsuA family rluB - 5.4.99.22 ko:K06178 - - - - ko00000,ko01000,ko03009 - - - PseudoU_synth_2,S4 PHJFGMMN_01248 411477.PARMER_01413 0.0 951.0 COG0017@1|root,COG0017@2|Bacteria,4NDY4@976|Bacteroidetes,2FKYI@200643|Bacteroidia,22XA5@171551|Porphyromonadaceae 976|Bacteroidetes J Asparaginyl-tRNA synthetase asnS - 6.1.1.22 ko:K01893 ko00970,map00970 M00359,M00360 R03648 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_2,tRNA_anti-codon PHJFGMMN_01249 411477.PARMER_01412 9.4e-110 315.0 COG1522@1|root,COG1522@2|Bacteria,4NMEN@976|Bacteroidetes,2FPN5@200643|Bacteroidia,22XMV@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator asnC - - ko:K03718 - - - - ko00000,ko03000 - - - AsnC_trans_reg,HTH_24,HTH_AsnC-type PHJFGMMN_01250 411477.PARMER_01411 5.62e-137 387.0 COG0454@1|root,COG0456@2|Bacteria,4NSIB@976|Bacteroidetes,2FPE3@200643|Bacteroidia,22YKB@171551|Porphyromonadaceae 976|Bacteroidetes K Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_1,Acetyltransf_7 PHJFGMMN_01251 411477.PARMER_01410 1.1e-98 287.0 COG0848@1|root,COG0848@2|Bacteria,4NKT1@976|Bacteroidetes,2FM42@200643|Bacteroidia,22XTT@171551|Porphyromonadaceae 976|Bacteroidetes U Biopolymer transporter ExbD - - - ko:K03559 - - - - ko00000,ko02000 1.A.30.2.1 - - ExbD PHJFGMMN_01252 411477.PARMER_01409 3.89e-132 375.0 COG0848@1|root,COG0848@2|Bacteria,4NHYQ@976|Bacteroidetes,2FMZ4@200643|Bacteroidia,22Y6V@171551|Porphyromonadaceae 976|Bacteroidetes U Biopolymer transporter ExbD - - - - - - - - - - - - ExbD PHJFGMMN_01253 411477.PARMER_01408 2.91e-104 301.0 2FH6B@1|root,3490R@2|Bacteria,4NSP7@976|Bacteroidetes,2FRZ3@200643|Bacteroidia,22YSE@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - PHJFGMMN_01254 411477.PARMER_01407 1.42e-161 454.0 COG0811@1|root,COG0811@2|Bacteria,4NEA2@976|Bacteroidetes,2FMMQ@200643|Bacteroidia,22WD0@171551|Porphyromonadaceae 976|Bacteroidetes U MotA TolQ ExbB proton channel family protein exbB - - ko:K03561 - - - - ko00000,ko02000 1.A.30.2.1 - - MotA_ExbB PHJFGMMN_01256 411477.PARMER_01405 1.02e-192 534.0 COG0084@1|root,COG0084@2|Bacteria,4NEVW@976|Bacteroidetes,2FMP9@200643|Bacteroidia,22XKP@171551|Porphyromonadaceae 976|Bacteroidetes L hydrolase, TatD tatD - - ko:K03424 - - - - ko00000,ko01000 - - - TatD_DNase PHJFGMMN_01257 411477.PARMER_01404 5.25e-233 641.0 COG0142@1|root,COG0142@2|Bacteria,4NEGQ@976|Bacteroidetes,2FPV5@200643|Bacteroidia,22VXB@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the FPP GGPP synthase family ispA - 2.5.1.1,2.5.1.10,2.5.1.29 ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00364,M00366 R01658,R02003,R02061 RC00279 ko00000,ko00001,ko00002,ko01000,ko01006 - - - polyprenyl_synt PHJFGMMN_01258 411477.PARMER_01403 4.74e-120 347.0 COG0810@1|root,COG0810@2|Bacteria,4NMG7@976|Bacteroidetes,2FPKW@200643|Bacteroidia,22XTD@171551|Porphyromonadaceae 976|Bacteroidetes M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins tonB2 - - ko:K03832 - - - - ko00000,ko02000 2.C.1.1 - - TonB_C PHJFGMMN_01259 411477.PARMER_01401 3.67e-240 660.0 COG2067@1|root,COG2067@2|Bacteria,4NHNC@976|Bacteroidetes,2FP24@200643|Bacteroidia,22WI2@171551|Porphyromonadaceae 976|Bacteroidetes I penicillin-binding protein porQ - - - - - - - - - - - PorP_SprF PHJFGMMN_01260 411477.PARMER_01400 7.67e-176 491.0 COG0283@1|root,COG0283@2|Bacteria,4NEMB@976|Bacteroidetes,2FM71@200643|Bacteroidia,22X8Z@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the cytidylate kinase family. Type 1 subfamily cmk GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 ko:K00945 ko00240,ko01100,map00240,map01100 M00052 R00158,R00512,R01665 RC00002 ko00000,ko00001,ko00002,ko01000 - - - Cytidylate_kin PHJFGMMN_01261 411477.PARMER_01399 1.59e-210 581.0 COG0761@1|root,COG0761@2|Bacteria,4NDUX@976|Bacteroidetes,2FMU7@200643|Bacteroidia,22XB1@171551|Porphyromonadaceae 976|Bacteroidetes IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis ispH - 1.17.7.4 ko:K03527 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05884,R08210 RC01137,RC01487 ko00000,ko00001,ko00002,ko01000 - - - LYTB PHJFGMMN_01262 411477.PARMER_01397 7.16e-232 638.0 COG0205@1|root,COG0205@2|Bacteria,4NF8F@976|Bacteroidetes,2FMPI@200643|Bacteroidia,22W6D@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis pfkA - 2.7.1.11 ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 M00001,M00345 R00756,R03236,R03237,R03238,R03239,R04779 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 - - - PFK PHJFGMMN_01263 411477.PARMER_01396 0.0 1604.0 COG1409@1|root,COG1520@1|root,COG1409@2|Bacteria,COG1520@2|Bacteria,4NFA9@976|Bacteroidetes,2FPAX@200643|Bacteroidia,22X7X@171551|Porphyromonadaceae 976|Bacteroidetes S PQQ enzyme repeat - - - - - - - - - - - - Metallophos,PQQ,PQQ_2,PQQ_3 PHJFGMMN_01264 411477.PARMER_01395 8.16e-265 725.0 COG1703@1|root,COG1703@2|Bacteria,4NE7Y@976|Bacteroidetes,2FNHU@200643|Bacteroidia,22XBJ@171551|Porphyromonadaceae 976|Bacteroidetes E LAO AO transport system ATPase argK - - ko:K07588 - - - - ko00000,ko01000 - - - ArgK PHJFGMMN_01265 411477.PARMER_01394 1.26e-266 730.0 2CG1Y@1|root,2Z9QX@2|Bacteria,4NJI6@976|Bacteroidetes,2FPRX@200643|Bacteroidia,22XW6@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1573) - - - - - - - - - - - - DUF1573 PHJFGMMN_01266 411477.PARMER_01393 1.03e-84 249.0 2CG1Y@1|root,31NHZ@2|Bacteria,4NQ9Z@976|Bacteroidetes,2FSBR@200643|Bacteroidia,22YJ9@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1573) - - - - - - - - - - - - DUF1573 PHJFGMMN_01268 411477.PARMER_01392 0.0 3773.0 COG2373@1|root,COG2373@2|Bacteria,4NED2@976|Bacteroidetes,2FNFE@200643|Bacteroidia,22WEK@171551|Porphyromonadaceae 976|Bacteroidetes S Alpha-2-macroglobulin family - - - - - - - - - - - - A2M,A2M_N,A2M_N_2,CarbopepD_reg_2,Plug PHJFGMMN_01269 411477.PARMER_01391 4.92e-123 350.0 COG0262@1|root,COG0262@2|Bacteria,4NQ2Y@976|Bacteroidetes,2FT42@200643|Bacteroidia,22Y3Q@171551|Porphyromonadaceae 976|Bacteroidetes H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis folA - 1.5.1.3 ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 M00126,M00840 R00936,R00937,R00939,R00940,R02235,R02236,R11765 RC00109,RC00110,RC00158 ko00000,ko00001,ko00002,ko01000 - - - 2TM,DHFR_1 PHJFGMMN_01270 411477.PARMER_01390 4.21e-202 558.0 COG0207@1|root,COG0207@2|Bacteria,4NEC2@976|Bacteroidetes,2FM46@200643|Bacteroidia,22W2J@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis thyA - 2.1.1.45 ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 M00053 R02101 RC00219,RC00332 ko00000,ko00001,ko00002,ko01000 - - - Thymidylat_synt PHJFGMMN_01271 411477.PARMER_01389 4.15e-282 769.0 COG2017@1|root,COG2017@2|Bacteria,4NF5G@976|Bacteroidetes,2FMMZ@200643|Bacteroidia,22X1S@171551|Porphyromonadaceae 976|Bacteroidetes G Converts alpha-aldose to the beta-anomer galM - 5.1.3.3 ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 M00632 R01602,R10619 RC00563 ko00000,ko00001,ko00002,ko01000 - - - Aldose_epim,Glyco_hydro_43 PHJFGMMN_01273 411477.PARMER_01384 3.6e-31 109.0 28XP8@1|root,2ZJK4@2|Bacteria,4P8M7@976|Bacteroidetes,2FZD5@200643|Bacteroidia,2311C@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01274 411477.PARMER_01383 1.79e-116 333.0 COG4185@1|root,COG4185@2|Bacteria,4NNKA@976|Bacteroidetes,2FQ6Z@200643|Bacteroidia,22Y15@171551|Porphyromonadaceae 976|Bacteroidetes S Zeta toxin - - - - - - - - - - - - Zeta_toxin PHJFGMMN_01276 411477.PARMER_01382 1.62e-258 709.0 COG0635@1|root,COG0635@2|Bacteria,4NFEE@976|Bacteroidetes,2FPFC@200643|Bacteroidia,22VY4@171551|Porphyromonadaceae 976|Bacteroidetes H Involved in the biosynthesis of porphyrin-containing compound hemN - - - - - - - - - - - HemN_C,Radical_SAM PHJFGMMN_01277 411477.PARMER_01381 0.0 1428.0 COG0480@1|root,COG0480@2|Bacteria,4NG4H@976|Bacteroidetes,2FN1G@200643|Bacteroidia,22VW0@171551|Porphyromonadaceae 976|Bacteroidetes J elongation factor G fusA2 - - ko:K02355 - - - - ko00000,ko03012,ko03029 - - - EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2 PHJFGMMN_01278 411477.PARMER_01379 5.3e-286 780.0 COG0707@1|root,COG0707@2|Bacteria,4PKSS@976|Bacteroidetes,2FMCT@200643|Bacteroidia,22WGK@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferase family 1 - - - - - - - - - - - - Glyco_trans_1_3 PHJFGMMN_01279 411477.PARMER_01378 0.0 863.0 COG2873@1|root,COG2873@2|Bacteria,4NE27@976|Bacteroidetes,2FMQX@200643|Bacteroidia,22XJV@171551|Porphyromonadaceae 976|Bacteroidetes E Cys/Met metabolism PLP-dependent enzyme metZ - 2.5.1.49 ko:K01740,ko:K10764 ko00270,ko00920,ko01100,map00270,map00920,map01100 - R01287,R01288,R04859 RC00020,RC02821,RC02848 ko00000,ko00001,ko01000 - - - Cys_Met_Meta_PP PHJFGMMN_01280 411477.PARMER_01377 3.84e-313 853.0 COG0534@1|root,COG0534@2|Bacteria,4NHCU@976|Bacteroidetes,2FMEH@200643|Bacteroidia,22VWJ@171551|Porphyromonadaceae 976|Bacteroidetes V Mate efflux family protein - - - - - - - - - - - - MatE PHJFGMMN_01281 411477.PARMER_01375 0.0 1176.0 COG4206@1|root,COG4206@2|Bacteria,4NGYD@976|Bacteroidetes,2FNFI@200643|Bacteroidia,22X28@171551|Porphyromonadaceae 976|Bacteroidetes H Psort location OuterMembrane, score - - - - - - - - - - - - TonB_dep_Rec PHJFGMMN_01282 411477.PARMER_01374 0.0 1520.0 COG0457@1|root,COG1729@1|root,COG4105@1|root,COG0457@2|Bacteria,COG1729@2|Bacteria,COG4105@2|Bacteria,4NE4W@976|Bacteroidetes,2FM3C@200643|Bacteroidia,22X5K@171551|Porphyromonadaceae 976|Bacteroidetes G Tetratricopeptide repeat protein - - - - - - - - - - - - TPR_16,TPR_2,TPR_21,TPR_6,TPR_8 PHJFGMMN_01283 999419.HMPREF1077_00409 2.33e-112 323.0 COG1051@1|root,COG1051@2|Bacteria,4NP2X@976|Bacteroidetes,2FMSZ@200643|Bacteroidia,22Y32@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the Nudix hydrolase family - - 3.6.1.55 ko:K03574 - - - - ko00000,ko01000,ko03400 - - - NUDIX,zf-NADH-PPase PHJFGMMN_01284 411477.PARMER_01371 4.82e-227 625.0 COG1940@1|root,COG1940@2|Bacteria,4NFZ1@976|Bacteroidetes,2FNGN@200643|Bacteroidia,22WUD@171551|Porphyromonadaceae 976|Bacteroidetes G glucokinase glcK - 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - ROK PHJFGMMN_01285 411477.PARMER_01370 2.42e-92 269.0 COG0346@1|root,COG0346@2|Bacteria,4NPHB@976|Bacteroidetes,2FSJQ@200643|Bacteroidia,22XUZ@171551|Porphyromonadaceae 976|Bacteroidetes E Lactoylglutathione lyase gloA - 4.4.1.5 ko:K01759 ko00620,map00620 - R02530 RC00004,RC00740 ko00000,ko00001,ko01000 - - - Glyoxalase PHJFGMMN_01286 411477.PARMER_01369 4.18e-181 503.0 COG2220@1|root,COG2220@2|Bacteria,4NHYV@976|Bacteroidetes,2FPWS@200643|Bacteroidia,22WWH@171551|Porphyromonadaceae 976|Bacteroidetes S Beta-lactamase superfamily domain - - - - - - - - - - - - Lactamase_B_3 PHJFGMMN_01287 411477.PARMER_01368 1.1e-283 775.0 COG0027@1|root,COG0027@2|Bacteria,4PKAW@976|Bacteroidetes,2FMB2@200643|Bacteroidia,22XEZ@171551|Porphyromonadaceae 976|Bacteroidetes F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate purT - 2.1.2.2 ko:K08289 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 M00048 R04325,R04326 RC00026,RC00197,RC01128 ko00000,ko00001,ko00002,ko01000 - - - ATP-grasp,Epimerase PHJFGMMN_01288 411477.PARMER_01367 2.79e-157 441.0 COG1136@1|root,COG1136@2|Bacteria,4NE5N@976|Bacteroidetes,2FNRG@200643|Bacteroidia,22VW5@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter, ATP-binding protein - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran PHJFGMMN_01289 411477.PARMER_01366 5.26e-298 813.0 COG0577@1|root,COG0577@2|Bacteria,4NEBD@976|Bacteroidetes,2FNZ2@200643|Bacteroidia,22WQ3@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter permease - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD PHJFGMMN_01290 411477.PARMER_01365 6.17e-304 829.0 COG0577@1|root,COG0577@2|Bacteria,4NFUG@976|Bacteroidetes,2FM5B@200643|Bacteroidia,22X15@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter, permease protein - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD PHJFGMMN_01291 411477.PARMER_01364 2.56e-251 691.0 COG0845@1|root,COG0845@2|Bacteria,4NFT4@976|Bacteroidetes,2FPA0@200643|Bacteroidia,22VXS@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23,OEP PHJFGMMN_01292 411477.PARMER_01363 2.05e-312 852.0 COG1538@1|root,COG1538@2|Bacteria,4NEEN@976|Bacteroidetes,2FM98@200643|Bacteroidia,22WWD@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 - - OEP PHJFGMMN_01293 411477.PARMER_01362 0.0 1392.0 COG3023@1|root,COG3023@2|Bacteria,4PKIH@976|Bacteroidetes 976|Bacteroidetes V Alpha-glucosidase - - 3.2.1.20,3.2.1.3 ko:K01187,ko:K21574 ko00052,ko00500,ko01100,map00052,map00500,map01100 - R00028,R00801,R00802,R01790,R01791,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 - GH31,GH97 - GH97_C,GH97_N,Glyco_hydro_97 PHJFGMMN_01294 411477.PARMER_01361 3.26e-285 778.0 COG1082@1|root,COG1082@2|Bacteria,4NEWC@976|Bacteroidetes,2FMTJ@200643|Bacteroidia,22ZWZ@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl-hydrolase 97 C-terminal, oligomerisation - - 3.2.1.20 ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 - R00028,R00801,R00802,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 - GH31 - GH97_C,GH97_N,Glyco_hydro_97 PHJFGMMN_01295 411477.PARMER_01360 2.35e-92 270.0 COG4977@1|root,COG4977@2|Bacteria,4PKX4@976|Bacteroidetes,2FNFD@200643|Bacteroidia 976|Bacteroidetes K transcriptional regulator (AraC family) - - - - - - - - - - - - AraC_binding,HTH_18,HTH_AraC PHJFGMMN_01296 411477.PARMER_01359 3.26e-242 668.0 COG3507@1|root,COG3507@2|Bacteria,4NEMG@976|Bacteroidetes,2FPP1@200643|Bacteroidia,22WTR@171551|Porphyromonadaceae 976|Bacteroidetes G F5 8 type C domain - - - - - - - - - - - - F5_F8_type_C,Glyco_hydro_43 PHJFGMMN_01297 411477.PARMER_01358 2.45e-292 796.0 2DBYM@1|root,2ZBW8@2|Bacteria,4NHDU@976|Bacteroidetes,2FQXP@200643|Bacteroidia,22Y34@171551|Porphyromonadaceae 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 PHJFGMMN_01298 411477.PARMER_01357 0.0 1461.0 COG3968@1|root,COG3968@2|Bacteria,4NG2B@976|Bacteroidetes,2FMC9@200643|Bacteroidia,22WEW@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the glutamine synthetase family glnA - 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 - R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 - - - GSIII_N,Gln-synt_C PHJFGMMN_01299 411477.PARMER_01355 0.0 1349.0 COG3808@1|root,COG3808@2|Bacteria,4NF2I@976|Bacteroidetes,2FM7F@200643|Bacteroidia,22WAD@171551|Porphyromonadaceae 976|Bacteroidetes C Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane hppA - 3.6.1.1 ko:K15987 ko00190,map00190 - - - ko00000,ko00001,ko01000 3.A.10.1 - - H_PPase,OmpA PHJFGMMN_01300 411477.PARMER_01354 3.69e-200 554.0 COG1752@1|root,COG1752@2|Bacteria,4NERH@976|Bacteroidetes,2FNX7@200643|Bacteroidia,22XKQ@171551|Porphyromonadaceae 976|Bacteroidetes S Phospholipase - - - ko:K07001 - - - - ko00000 - - - Patatin PHJFGMMN_01301 411477.PARMER_01353 0.0 1178.0 COG0366@1|root,COG0366@2|Bacteria,4NEVK@976|Bacteroidetes,2FNVI@200643|Bacteroidia,22WSY@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha amylase, catalytic domain protein amyA2 - - - - - - - - - - - Alpha-amylase,tRNA_SAD PHJFGMMN_01302 411477.PARMER_01352 7.06e-221 609.0 COG0462@1|root,COG0462@2|Bacteria,4NEVF@976|Bacteroidetes,2FPH1@200643|Bacteroidia,22WNU@171551|Porphyromonadaceae 976|Bacteroidetes F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) prs - 2.7.6.1 ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 M00005 R01049 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - Pribosyl_synth,Pribosyltran_N PHJFGMMN_01303 411477.PARMER_01351 6.27e-274 747.0 COG0482@1|root,COG0482@2|Bacteria,4NFXZ@976|Bacteroidetes,2FPBU@200643|Bacteroidia,22W20@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 trmU - 2.8.1.13 ko:K00566 ko04122,map04122 - R08700 RC02313,RC02315 ko00000,ko00001,ko01000,ko03016 - - - tRNA_Me_trans PHJFGMMN_01305 411477.PARMER_01348 5.62e-252 691.0 COG0182@1|root,COG0182@2|Bacteria,4NETC@976|Bacteroidetes,2FR7K@200643|Bacteroidia,22ZA9@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) mtnA - 5.3.1.23 ko:K08963 ko00270,ko01100,map00270,map01100 M00034 R04420 RC01151 ko00000,ko00001,ko00002,ko01000 - - - IF-2B PHJFGMMN_01306 411477.PARMER_01347 8.55e-33 114.0 COG0828@1|root,COG0828@2|Bacteria,4NUPV@976|Bacteroidetes,2FUNX@200643|Bacteroidia,22YR8@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bS21 family rpsU - - ko:K02970 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S21 PHJFGMMN_01307 411477.PARMER_01346 3.22e-216 597.0 COG4974@1|root,COG4974@2|Bacteria,4NGQW@976|Bacteroidetes,2FNFK@200643|Bacteroidia,22WRA@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family xerC - - ko:K03733 - - - - ko00000,ko03036 - - - Phage_int_SAM_1,Phage_integrase PHJFGMMN_01308 411477.PARMER_01345 7.84e-61 187.0 COG1544@1|root,COG1544@2|Bacteria,4NUME@976|Bacteroidetes,2FTZJ@200643|Bacteroidia,22YG0@171551|Porphyromonadaceae 976|Bacteroidetes J Ribosomal subunit interface protein raiA - - ko:K05808 - - - - ko00000,ko03009 - - - Ribosomal_S30AE PHJFGMMN_01313 411477.PARMER_01340 7.06e-292 796.0 COG0050@1|root,COG0050@2|Bacteria,4NEWS@976|Bacteroidetes,2FKZA@200643|Bacteroidia,22W1B@171551|Porphyromonadaceae 976|Bacteroidetes J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis tuf - - ko:K02358 - - - - ko00000,ko03012,ko03029,ko04147 - - - GTP_EFTU,GTP_EFTU_D2,GTP_EFTU_D3 PHJFGMMN_01315 411477.PARMER_01338 5.7e-36 122.0 COG0690@1|root,COG0690@2|Bacteria,4NUSJ@976|Bacteroidetes,2FUTR@200643|Bacteroidia,22YRZ@171551|Porphyromonadaceae 976|Bacteroidetes U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation secE - - ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 - - SecE PHJFGMMN_01316 411477.PARMER_01337 2.49e-123 352.0 COG0250@1|root,COG0250@2|Bacteria,4NF2X@976|Bacteroidetes,2FNJ6@200643|Bacteroidia,22XKN@171551|Porphyromonadaceae 976|Bacteroidetes K Participates in transcription elongation, termination and antitermination nusG - - ko:K02601 - - - - ko00000,ko03009,ko03021 - - - KOW,NusG PHJFGMMN_01317 411477.PARMER_01336 1.04e-99 289.0 COG0080@1|root,COG0080@2|Bacteria,4NM60@976|Bacteroidetes,2FRYX@200643|Bacteroidia,22XQN@171551|Porphyromonadaceae 976|Bacteroidetes J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors rplK - - ko:K02867 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L11,Ribosomal_L11_N PHJFGMMN_01318 411477.PARMER_01335 1.01e-159 448.0 COG0081@1|root,COG0081@2|Bacteria,4NEIC@976|Bacteroidetes,2FNKI@200643|Bacteroidia,22X02@171551|Porphyromonadaceae 976|Bacteroidetes J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release rplA GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02863 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L1 PHJFGMMN_01319 411477.PARMER_01334 1.56e-115 332.0 COG0244@1|root,COG0244@2|Bacteria,4NFFK@976|Bacteroidetes,2FSBB@200643|Bacteroidia,22XXG@171551|Porphyromonadaceae 976|Bacteroidetes J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors rplJ - - ko:K02864 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L10 PHJFGMMN_01320 411477.PARMER_01333 6.3e-61 189.0 COG0222@1|root,COG0222@2|Bacteria,4NQAQ@976|Bacteroidetes,2FSJH@200643|Bacteroidia,22Y4T@171551|Porphyromonadaceae 976|Bacteroidetes J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation rplL - - ko:K02935 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L12,Ribosomal_L12_N PHJFGMMN_01321 411477.PARMER_01332 0.0 2490.0 COG0085@1|root,COG0085@2|Bacteria,4NF8D@976|Bacteroidetes,2FMDI@200643|Bacteroidia,22X4R@171551|Porphyromonadaceae 976|Bacteroidetes K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates rpoB - 2.7.7.6 ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - RNA_pol_Rpb2_1,RNA_pol_Rpb2_2,RNA_pol_Rpb2_3,RNA_pol_Rpb2_45,RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 PHJFGMMN_01322 411477.PARMER_01331 0.0 2783.0 COG0086@1|root,COG0086@2|Bacteria,4NEMW@976|Bacteroidetes,2FMWR@200643|Bacteroidia,22VWB@171551|Porphyromonadaceae 976|Bacteroidetes K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates rpoC GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - RNA_pol_Rpb1_1,RNA_pol_Rpb1_2,RNA_pol_Rpb1_3,RNA_pol_Rpb1_4,RNA_pol_Rpb1_5 PHJFGMMN_01323 411477.PARMER_01330 1.22e-217 599.0 COG3568@1|root,COG3568@2|Bacteria,4NHXV@976|Bacteroidetes,2FNR3@200643|Bacteroidia,22X95@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos PHJFGMMN_01324 411477.PARMER_01329 2.25e-207 573.0 COG2207@1|root,COG2207@2|Bacteria,4NEVG@976|Bacteroidetes,2FN82@200643|Bacteroidia,22WI8@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - AraC_binding,HTH_18 PHJFGMMN_01325 411477.PARMER_01328 7.41e-65 197.0 COG4191@1|root,COG4191@2|Bacteria,4NSNP@976|Bacteroidetes,2FTSX@200643|Bacteroidia,22YDJ@171551|Porphyromonadaceae 976|Bacteroidetes T Protein of unknown function (DUF3467) - - - - - - - - - - - - DUF3467 PHJFGMMN_01326 997884.HMPREF1068_03676 9.77e-07 47.8 2A7KA@1|root,30WI8@2|Bacteria,4P9XY@976|Bacteroidetes,2FUN8@200643|Bacteroidia,4AS70@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01327 411477.PARMER_01326 4.47e-174 485.0 COG0204@1|root,COG0204@2|Bacteria,4NG5R@976|Bacteroidetes,2FMJG@200643|Bacteroidia,22XRW@171551|Porphyromonadaceae 976|Bacteroidetes I Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family plsC - 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyltransferase PHJFGMMN_01328 411477.PARMER_01325 0.0 1026.0 2C95T@1|root,2Z7NG@2|Bacteria,4NGVW@976|Bacteroidetes,2G2HY@200643|Bacteroidia,22XWJ@171551|Porphyromonadaceae 976|Bacteroidetes S Capsule assembly protein Wzi - - - - - - - - - - - - Caps_assemb_Wzi PHJFGMMN_01329 411477.PARMER_01324 7.47e-263 718.0 COG2267@1|root,COG2267@2|Bacteria,4NHI2@976|Bacteroidetes,2FNPW@200643|Bacteroidia,22WWI@171551|Porphyromonadaceae 976|Bacteroidetes I Alpha/beta hydrolase family - - - - - - - - - - - - Hydrolase_4 PHJFGMMN_01330 411477.PARMER_03987 7.09e-30 106.0 298PA@1|root,2ZQYC@2|Bacteria,4P7SE@976|Bacteroidetes,2FTQE@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4248) - - - - - - - - - - - - DUF4248 PHJFGMMN_01331 411477.PARMER_01320 2.32e-75 225.0 COG0360@1|root,COG0360@2|Bacteria,4NQ9W@976|Bacteroidetes,2FSHK@200643|Bacteroidia,22Y4M@171551|Porphyromonadaceae 976|Bacteroidetes J Binds together with S18 to 16S ribosomal RNA rpsF - - ko:K02990 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011,ko03029 - - - Ribosomal_S6 PHJFGMMN_01332 411477.PARMER_01319 1.44e-56 176.0 COG0238@1|root,COG0238@2|Bacteria,4NSAR@976|Bacteroidetes,2FT22@200643|Bacteroidia,22Y4P@171551|Porphyromonadaceae 976|Bacteroidetes J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit rpsR GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02963 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S18 PHJFGMMN_01333 411477.PARMER_01318 8.85e-92 269.0 COG0359@1|root,COG0359@2|Bacteria,4NNRP@976|Bacteroidetes,2FSTU@200643|Bacteroidia,22XP0@171551|Porphyromonadaceae 976|Bacteroidetes J binds to the 23S rRNA rplI - - ko:K02939 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L9_C,Ribosomal_L9_N PHJFGMMN_01334 411477.PARMER_01317 1.06e-280 771.0 COG0860@1|root,COG0860@2|Bacteria,4NGKC@976|Bacteroidetes,2FPGX@200643|Bacteroidia,22WFQ@171551|Porphyromonadaceae 976|Bacteroidetes M N-acetylmuramoyl-L-alanine amidase amiA - 3.5.1.28 ko:K01448 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 - - - Amidase_3 PHJFGMMN_01335 411477.PARMER_01316 8.71e-201 557.0 COG1463@1|root,COG1463@2|Bacteria,4NHT9@976|Bacteroidetes,2FPK9@200643|Bacteroidia,22X9M@171551|Porphyromonadaceae 976|Bacteroidetes Q Virulence factor Mce family protein - - - ko:K02067 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - MlaD PHJFGMMN_01336 411477.PARMER_01314 0.0 917.0 COG0593@1|root,COG0593@2|Bacteria,4NE6Q@976|Bacteroidetes,2FNPD@200643|Bacteroidia,22X3Z@171551|Porphyromonadaceae 976|Bacteroidetes L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids dnaA GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - ko:K02313 ko02020,ko04112,map02020,map04112 - - - ko00000,ko00001,ko03032,ko03036 - - - Bac_DnaA,Bac_DnaA_C,DnaA_N PHJFGMMN_01337 411477.PARMER_01312 0.0 1732.0 COG0209@1|root,COG0209@2|Bacteria,4NEHQ@976|Bacteroidetes,2FN30@200643|Bacteroidia,22W6K@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen nrd - 1.17.4.1 ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R02017,R02018,R02019,R02024 RC00613 ko00000,ko00001,ko00002,ko01000,ko03400 - - - Ribonuc_red_lgC,Ribonuc_red_lgN PHJFGMMN_01338 411477.PARMER_01311 0.0 1853.0 COG1640@1|root,COG1640@2|Bacteria,4NF7Z@976|Bacteroidetes,2FMBZ@200643|Bacteroidia,22WJ2@171551|Porphyromonadaceae 976|Bacteroidetes G 4-alpha-glucanotransferase malQ - 2.4.1.25 ko:K00705 ko00500,ko01100,map00500,map01100 - R05196 RC00049 ko00000,ko00001,ko01000 - GH77 - CBM_20,Glyco_hydro_77 PHJFGMMN_01339 411477.PARMER_01310 4.92e-285 780.0 COG5263@1|root,COG5263@2|Bacteria 2|Bacteria S dextransucrase activity - - - - - - - - - - - - CW_binding_1,Glug,Peptidase_C39_2,Peptidase_S9,SLH,YSIRK_signal PHJFGMMN_01340 411477.PARMER_01309 2.96e-56 177.0 COG1664@1|root,COG1664@2|Bacteria,4NUZA@976|Bacteroidetes,2FUPU@200643|Bacteroidia,22YMZ@171551|Porphyromonadaceae 976|Bacteroidetes M Integral membrane protein CcmA involved in cell shape determination - - - - - - - - - - - - Bactofilin PHJFGMMN_01341 411477.PARMER_01308 7.67e-80 237.0 COG1539@1|root,COG1539@2|Bacteria,4NQ53@976|Bacteroidetes,2FSRG@200643|Bacteroidia,22YF6@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin folB - 1.13.11.81,4.1.2.25,5.1.99.8 ko:K01633 ko00790,ko01100,map00790,map01100 M00126,M00840 R03504,R11037,R11073 RC00721,RC00943,RC01479,RC03333,RC03334 ko00000,ko00001,ko00002,ko01000 - - - FolB PHJFGMMN_01342 411477.PARMER_01307 0.0 881.0 COG1142@1|root,COG4624@1|root,COG1142@2|Bacteria,COG4624@2|Bacteria,4NGF4@976|Bacteroidetes,2FPND@200643|Bacteroidia,22WV7@171551|Porphyromonadaceae 976|Bacteroidetes C Hydrogenase - - - - - - - - - - - - Fe_hyd_lg_C,Fer4 PHJFGMMN_01343 411477.PARMER_01306 8.59e-314 853.0 28HW2@1|root,2Z825@2|Bacteria,4NF6G@976|Bacteroidetes,2FMR4@200643|Bacteroidia,22X2Q@171551|Porphyromonadaceae 976|Bacteroidetes S Peptide-N-glycosidase F, N terminal - - - - - - - - - - - - N-glycanase_C,N-glycanase_N PHJFGMMN_01344 999419.HMPREF1077_00479 2.59e-144 407.0 COG2095@1|root,COG2095@2|Bacteria,4NIHF@976|Bacteroidetes,2FMIJ@200643|Bacteroidia,22XS3@171551|Porphyromonadaceae 976|Bacteroidetes U MarC family integral membrane protein - - - ko:K05595 - - - - ko00000,ko02000 2.A.95.1 - - MarC PHJFGMMN_01345 411477.PARMER_01303 1.35e-266 728.0 COG1216@1|root,COG1216@2|Bacteria,4NFP0@976|Bacteroidetes,2FN97@200643|Bacteroidia,22WGJ@171551|Porphyromonadaceae 976|Bacteroidetes S glycosyl transferase family 2 - - - ko:K07011 - - - - ko00000 - - - Glycos_transf_2 PHJFGMMN_01346 411477.PARMER_01302 1.33e-224 618.0 COG1560@1|root,COG1560@2|Bacteria,4NGQU@976|Bacteroidetes,2FPU3@200643|Bacteroidia,22WWZ@171551|Porphyromonadaceae 976|Bacteroidetes M Lipid A Biosynthesis waaM - 2.3.1.241 ko:K02517 ko00540,ko01100,map00540,map01100 M00060 R05146 RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Lip_A_acyltrans PHJFGMMN_01347 411477.PARMER_01301 0.0 884.0 COG0621@1|root,COG0621@2|Bacteria,4NE0R@976|Bacteroidetes,2FM1T@200643|Bacteroidia,22XEW@171551|Porphyromonadaceae 976|Bacteroidetes J Fe-S oxidoreductase yqeV - 2.8.4.5 ko:K18707 - - R10649 RC00003,RC03221 ko00000,ko01000,ko03016 - - - Radical_SAM,UPF0004 PHJFGMMN_01348 411477.PARMER_01300 3.56e-303 825.0 COG1317@1|root,COG1317@2|Bacteria,4NWPE@976|Bacteroidetes,2G39N@200643|Bacteroidia,2303S@171551|Porphyromonadaceae 976|Bacteroidetes NU Lipid A 3-O-deacylase (PagL) - - - - - - - - - - - - PagL PHJFGMMN_01349 411477.PARMER_01299 0.0 1108.0 COG1022@1|root,COG1022@2|Bacteria,4NGFQ@976|Bacteroidetes,2FN1X@200643|Bacteroidia,22W8F@171551|Porphyromonadaceae 976|Bacteroidetes I Long-chain fatty acid--CoA ligase - - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding PHJFGMMN_01351 411477.PARMER_01297 0.0 1401.0 COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,4P0XV@976|Bacteroidetes,2FWCI@200643|Bacteroidia,22ZUA@171551|Porphyromonadaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - OMP_b-brl_3 PHJFGMMN_01352 411477.PARMER_01296 9.08e-238 653.0 COG0078@1|root,COG0078@2|Bacteria,4NEYX@976|Bacteroidetes,2FNR9@200643|Bacteroidia,22WE0@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the ATCase OTCase family argF GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 ko:K09065,ko:K13043 ko00220,ko01100,ko01230,map00220,map01100,map01230 M00845 R07245,R08937 RC00096 ko00000,ko00001,ko00002,ko01000 - - - OTCace,OTCace_N PHJFGMMN_01353 411477.PARMER_01295 7.16e-297 810.0 COG0014@1|root,COG0014@2|Bacteria,4NEPQ@976|Bacteroidetes,2FN24@200643|Bacteroidia,22WMQ@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate proA GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 M00015 R03313 RC00684 ko00000,ko00001,ko00002,ko01000 - - - Aldedh PHJFGMMN_01354 411477.PARMER_01294 1.66e-268 735.0 COG0263@1|root,COG0263@2|Bacteria,4NH75@976|Bacteroidetes,2FM31@200643|Bacteroidia,22WGI@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate proB GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 M00015 R00239 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase,PUA PHJFGMMN_01355 411477.PARMER_01293 0.0 1143.0 COG0365@1|root,COG0365@2|Bacteria,4NEAD@976|Bacteroidetes,2FNEM@200643|Bacteroidia,22VYT@171551|Porphyromonadaceae 976|Bacteroidetes I AMP-binding enzyme C-terminal domain acsA - 6.2.1.1,6.2.1.32 ko:K01895,ko:K08295 ko00010,ko00620,ko00627,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00627,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 M00357 R00235,R00236,R00316,R00926,R00982,R01354 RC00004,RC00012,RC00043,RC00070,RC00174,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko01004 - - - AMP-binding,AMP-binding_C PHJFGMMN_01356 411477.PARMER_01292 3.66e-127 362.0 COG1396@1|root,COG1917@1|root,COG1396@2|Bacteria,COG1917@2|Bacteria,4NNDM@976|Bacteroidetes,2FP7C@200643|Bacteroidia,22XSH@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix XRE-family like proteins - - - - - - - - - - - - Cupin_2,HTH_19,HTH_3,HTH_31 PHJFGMMN_01357 411477.PARMER_01290 1.08e-39 131.0 COG1141@1|root,COG1141@2|Bacteria,4P7D9@976|Bacteroidetes,2FZ83@200643|Bacteroidia 976|Bacteroidetes C 4Fe-4S single cluster domain of Ferredoxin I - - - - - - - - - - - - Fer4_13 PHJFGMMN_01358 411477.PARMER_01289 0.0 1097.0 COG1012@1|root,COG1012@2|Bacteria,4NFTW@976|Bacteroidetes,2FQQ7@200643|Bacteroidia,22WBS@171551|Porphyromonadaceae 976|Bacteroidetes C 1-pyrroline-5-carboxylate dehydrogenase pruA - 1.2.1.88,1.5.5.2 ko:K00294,ko:K13821 ko00250,ko00330,ko01100,ko01110,ko01130,map00250,map00330,map01100,map01110,map01130 - R00245,R00707,R00708,R01253,R04444,R04445,R05051 RC00080,RC00083,RC00216,RC00242,RC00255 ko00000,ko00001,ko01000,ko03000 - - - Aldedh,Pro_dh PHJFGMMN_01359 411477.PARMER_01288 1.64e-284 777.0 COG0506@1|root,COG0506@2|Bacteria,4NEH5@976|Bacteroidetes,2FRJ4@200643|Bacteroidia,22VZE@171551|Porphyromonadaceae 976|Bacteroidetes E Proline dehydrogenase - - - ko:K00318 ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130 - R10507 RC00083 ko00000,ko00001,ko01000 - - - Pro_dh PHJFGMMN_01361 411477.PARMER_01286 3.79e-182 508.0 COG0345@1|root,COG0345@2|Bacteria,4NE6F@976|Bacteroidetes,2FMRG@200643|Bacteroidia,22WAW@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline proC - 1.5.1.2 ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 M00015 R01248,R01251,R03291,R03293 RC00054,RC00083 ko00000,ko00001,ko00002,ko01000 - - - F420_oxidored,P5CR_dimer PHJFGMMN_01362 411477.PARMER_01285 4.01e-303 825.0 COG3579@1|root,COG3579@2|Bacteria,4NE02@976|Bacteroidetes,2FN7G@200643|Bacteroidia,22W1M@171551|Porphyromonadaceae 976|Bacteroidetes E aminopeptidase pepC - 3.4.22.40 ko:K01372 - - - - ko00000,ko01000,ko01002 - - - Peptidase_C1,Peptidase_C1_2 PHJFGMMN_01363 411477.PARMER_01284 8.05e-113 326.0 COG3015@1|root,COG3015@2|Bacteria,4P5SI@976|Bacteroidetes 976|Bacteroidetes MP NlpE N-terminal domain - - - - - - - - - - - - NlpE PHJFGMMN_01364 411477.PARMER_01283 0.0 1609.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NETS@976|Bacteroidetes,2FRBH@200643|Bacteroidia,22ZE0@171551|Porphyromonadaceae 976|Bacteroidetes EU Dipeptidyl peptidase IV (DPP IV) N-terminal region - - 3.4.14.5 ko:K01278 ko04974,map04974 - - - ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 - - - DPPIV_N,Peptidase_S9 PHJFGMMN_01366 411477.PARMER_01281 0.0 1550.0 COG3408@1|root,COG3408@2|Bacteria,4PMQ8@976|Bacteroidetes,2FQR0@200643|Bacteroidia,2301J@171551|Porphyromonadaceae 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase C-terminal domain - - - - - - - - - - - - Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C PHJFGMMN_01367 411477.PARMER_01280 1.08e-118 339.0 COG0545@1|root,COG0545@2|Bacteria 2|Bacteria O Peptidyl-prolyl cis-trans isomerase - - - - - - - - - - - - FKBP_C PHJFGMMN_01368 411477.PARMER_01279 1.43e-274 750.0 COG4992@1|root,COG4992@2|Bacteria,4NE0Z@976|Bacteroidetes,2FNR5@200643|Bacteroidia,22VXR@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family argD - 2.6.1.11,2.6.1.17 ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00028,M00845 R02283,R04475 RC00006,RC00062 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3 PHJFGMMN_01370 411477.PARMER_01277 8.45e-238 653.0 COG0002@1|root,COG0002@2|Bacteria,4NEQR@976|Bacteroidetes,2FMWZ@200643|Bacteroidia,22WTC@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde argC - 1.2.1.38 ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028,M00845 R03443 RC00684 ko00000,ko00001,ko00002,ko01000 - - - Semialdhyde_dh,Semialdhyde_dhC PHJFGMMN_01371 411477.PARMER_01276 2.77e-291 795.0 COG0137@1|root,COG0137@2|Bacteria,4NE3R@976|Bacteroidetes,2FMRA@200643|Bacteroidia,22X17@171551|Porphyromonadaceae 976|Bacteroidetes E argininosuccinate synthase argG - 6.3.4.5 ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 M00029,M00844,M00845 R01954 RC00380,RC00629 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Arginosuc_synth PHJFGMMN_01372 411477.PARMER_01275 1.17e-141 399.0 COG1246@1|root,COG1246@2|Bacteria,4NGXY@976|Bacteroidetes,2FN6P@200643|Bacteroidia,22XAD@171551|Porphyromonadaceae 976|Bacteroidetes E Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_1 PHJFGMMN_01373 999419.HMPREF1077_00508 1.21e-110 318.0 COG1438@1|root,COG1438@2|Bacteria,4NSSS@976|Bacteroidetes,2FR3Q@200643|Bacteroidia,22YDN@171551|Porphyromonadaceae 976|Bacteroidetes K Regulates arginine biosynthesis genes argR - - ko:K03402 - - - - ko00000,ko03000 - - - Arg_repressor,Arg_repressor_C PHJFGMMN_01374 411477.PARMER_01273 5.82e-180 502.0 COG0501@1|root,COG0501@2|Bacteria,4NE0J@976|Bacteroidetes,2FQJ1@200643|Bacteroidia,22VWE@171551|Porphyromonadaceae 976|Bacteroidetes O Peptidase, M48 family - - - - - - - - - - - - Peptidase_M48 PHJFGMMN_01375 411477.PARMER_01271 0.0 1197.0 COG0249@1|root,COG0249@2|Bacteria,4NE6X@976|Bacteroidetes,2FM62@200643|Bacteroidia,22W8S@171551|Porphyromonadaceae 976|Bacteroidetes L ATPase domain of DNA mismatch repair MUTS family mutS_2 - - - - - - - - - - - MutS_III,MutS_V PHJFGMMN_01376 411477.PARMER_01270 4.74e-210 580.0 COG2829@1|root,COG2829@2|Bacteria,4NIYQ@976|Bacteroidetes,2FR73@200643|Bacteroidia,22WW2@171551|Porphyromonadaceae 976|Bacteroidetes M Phospholipase A1 pldA - 3.1.1.32,3.1.1.4 ko:K01058 ko00564,ko00565,ko00590,ko00591,ko00592,ko01100,ko01110,map00564,map00565,map00590,map00591,map00592,map01100,map01110 - R01315,R01316,R01317,R02053,R02054,R04034,R07064,R07379,R07387,R07859,R07860 RC00020,RC00037,RC00041,RC00094 ko00000,ko00001,ko01000 - - - PLA1 PHJFGMMN_01377 411477.PARMER_01269 1.21e-227 629.0 COG0628@1|root,COG0628@2|Bacteria,4NIB3@976|Bacteroidetes,2FPVP@200643|Bacteroidia,22WR3@171551|Porphyromonadaceae 976|Bacteroidetes S AI-2E family transporter - - - - - - - - - - - - AI-2E_transport PHJFGMMN_01378 411477.PARMER_01268 2.45e-212 585.0 COG0024@1|root,COG0024@2|Bacteria,4NIMB@976|Bacteroidetes,2FM2H@200643|Bacteroidia,22X18@171551|Porphyromonadaceae 976|Bacteroidetes E Metallopeptidase family M24 map - 3.4.11.18 ko:K01265 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M24 PHJFGMMN_01379 411477.PARMER_01267 1.49e-82 245.0 COG1970@1|root,COG1970@2|Bacteria,4NQ49@976|Bacteroidetes,2FT2E@200643|Bacteroidia,22Y4Y@171551|Porphyromonadaceae 976|Bacteroidetes M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell mscL GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - ko:K03282 - - - - ko00000,ko02000 1.A.22.1 - - MscL PHJFGMMN_01380 999419.HMPREF1077_02514 3.13e-53 182.0 COG0369@1|root,COG1151@2|Bacteria,4NGRB@976|Bacteroidetes,2FMDK@200643|Bacteroidia,22W6M@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O hcp GO:0000302,GO:0003674,GO:0003824,GO:0004601,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016661,GO:0016684,GO:0042221,GO:0042493,GO:0042542,GO:0046677,GO:0050418,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1990748 1.7.99.1 ko:K05601 ko00910,map00910 - R00143 RC02797 ko00000,ko00001,ko01000 - - - Prismane PHJFGMMN_01383 616991.JPOO01000003_gene1097 1.01e-34 122.0 2EBGV@1|root,335HF@2|Bacteria,4NV5E@976|Bacteroidetes,1I6Q2@117743|Flavobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01384 411477.PARMER_04233 3.83e-230 633.0 COG0454@1|root,COG0456@2|Bacteria,4NRHS@976|Bacteroidetes,2FTCT@200643|Bacteroidia,22Y54@171551|Porphyromonadaceae 976|Bacteroidetes K GNAT family acetyltransferase - - 2.3.1.82 ko:K18815 - - - - br01600,ko00000,ko01000,ko01504 - - - Acetyltransf_1,Acetyltransf_10,Acetyltransf_7 PHJFGMMN_01385 411477.PARMER_04232 1.9e-83 246.0 2E4R1@1|root,32ZJK@2|Bacteria,4NT8J@976|Bacteroidetes,2FU1N@200643|Bacteroidia,22YJZ@171551|Porphyromonadaceae 976|Bacteroidetes S Nitrous oxide-stimulated promoter - - - - - - - - - - - - YgbA_NO PHJFGMMN_01387 411477.PARMER_04230 0.0 1098.0 COG3507@1|root,COG3507@2|Bacteria,4NJ7K@976|Bacteroidetes,2FPFY@200643|Bacteroidia,22XK4@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 43 - - - - - - - - - - - - Glyco_hydro_43 PHJFGMMN_01389 411477.PARMER_04229 0.0 1098.0 COG0564@1|root,COG0564@2|Bacteria,4NE9B@976|Bacteroidetes,2FP72@200643|Bacteroidia,22ZHI@171551|Porphyromonadaceae 976|Bacteroidetes J RNA pseudouridylate synthase rluA - 5.4.99.28,5.4.99.29 ko:K06177 - - - - ko00000,ko01000,ko03009,ko03016 - - - PseudoU_synth_2 PHJFGMMN_01390 411477.PARMER_04227 1.36e-205 568.0 COG1028@1|root,COG1028@2|Bacteria,4NKYV@976|Bacteroidetes,2FNI3@200643|Bacteroidia,22Z6A@171551|Porphyromonadaceae 976|Bacteroidetes IQ Enoyl-(Acyl carrier protein) reductase - - - - - - - - - - - - adh_short_C2 PHJFGMMN_01391 411477.PARMER_04226 1.24e-192 534.0 COG0566@1|root,COG0566@2|Bacteria,4NEFJ@976|Bacteroidetes,2FMWP@200643|Bacteroidia,23039@171551|Porphyromonadaceae 976|Bacteroidetes J SpoU rRNA Methylase family spoU - - ko:K03437 - - - - ko00000,ko03016 - - - SpoU_methylase,SpoU_sub_bind PHJFGMMN_01392 411477.PARMER_04225 2.06e-260 712.0 COG1063@1|root,COG1063@2|Bacteria,4NE11@976|Bacteroidetes,2FNP5@200643|Bacteroidia,22WVA@171551|Porphyromonadaceae 976|Bacteroidetes E COG1063 Threonine dehydrogenase and related Zn-dependent yjmD_2 - - ko:K18369 ko00640,map00640 - R10703 RC00545 ko00000,ko00001,ko01000 - - - ADH_N,ADH_N_assoc,ADH_zinc_N,ADH_zinc_N_2 PHJFGMMN_01393 411477.PARMER_04224 3.44e-238 655.0 COG3147@1|root,COG3147@2|Bacteria,4PKTI@976|Bacteroidetes,2FQ1W@200643|Bacteroidia,22YHW@171551|Porphyromonadaceae 976|Bacteroidetes S Sporulation and cell division repeat protein - - - - - - - - - - - - SPOR PHJFGMMN_01394 411477.PARMER_04223 1.11e-37 126.0 COG4877@1|root,COG4877@2|Bacteria,4NXSU@976|Bacteroidetes,2FUU4@200643|Bacteroidia,22YTT@171551|Porphyromonadaceae 976|Bacteroidetes S Arc-like DNA binding domain - - - - - - - - - - - - Arc,RHH_5 PHJFGMMN_01395 411477.PARMER_04222 6.34e-197 547.0 COG0330@1|root,COG0330@2|Bacteria,4NEBV@976|Bacteroidetes,2FPV3@200643|Bacteroidia,22WRS@171551|Porphyromonadaceae 976|Bacteroidetes O prohibitin homologues - - - - - - - - - - - - Band_7 PHJFGMMN_01396 411477.PARMER_04221 0.0 1199.0 COG0457@1|root,COG0507@1|root,COG0457@2|Bacteria,COG0507@2|Bacteria,4NF6J@976|Bacteroidetes,2FM19@200643|Bacteroidia,22X68@171551|Porphyromonadaceae 976|Bacteroidetes L COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member - - - - - - - - - - - - Herpes_Helicase,PIF1,TPR_16,TPR_2,TPR_8 PHJFGMMN_01397 411477.PARMER_04220 0.0 2137.0 COG1629@1|root,COG4771@2|Bacteria,4NF66@976|Bacteroidetes,2FKYY@200643|Bacteroidia,22X50@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg,Plug,TonB_dep_Rec PHJFGMMN_01398 999419.HMPREF1077_02453 1.55e-293 800.0 COG1524@1|root,COG1524@2|Bacteria,4NFFG@976|Bacteroidetes,2FNFJ@200643|Bacteroidia,22WMT@171551|Porphyromonadaceae 976|Bacteroidetes S phosphodiesterase - - 3.1.3.1 ko:K01113 ko00790,ko01100,ko02020,map00790,map01100,map02020 M00126 R04620 RC00017 ko00000,ko00001,ko00002,ko01000 - - - Phosphodiest PHJFGMMN_01400 411477.PARMER_04216 0.0 1235.0 COG1884@1|root,COG1884@2|Bacteria,4NDVE@976|Bacteroidetes,2FM0R@200643|Bacteroidia,22X3V@171551|Porphyromonadaceae 976|Bacteroidetes I Methylmalonyl-CoA mutase mutA - 5.4.99.2 ko:K01847 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00373,M00376,M00741 R00833 RC00395 ko00000,ko00001,ko00002,ko01000 - - - MM_CoA_mutase PHJFGMMN_01401 411477.PARMER_04215 0.0 1449.0 COG1884@1|root,COG2185@1|root,COG1884@2|Bacteria,COG2185@2|Bacteria,4NFS0@976|Bacteroidetes,2FNWM@200643|Bacteroidia,22WFX@171551|Porphyromonadaceae 976|Bacteroidetes I Methylmalonyl-CoA mutase mutB - 5.4.99.2 ko:K01847 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00373,M00376,M00741 R00833 RC00395 ko00000,ko00001,ko00002,ko01000 - - - B12-binding,MM_CoA_mutase PHJFGMMN_01404 411477.PARMER_04213 0.0 1007.0 COG0793@1|root,COG0793@2|Bacteria,4NFKJ@976|Bacteroidetes,2FNZE@200643|Bacteroidia,22Y3M@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family S41 - - - - - - - - - - - - PDZ,PDZ_2,Peptidase_S41 PHJFGMMN_01405 411477.PARMER_04211 0.0 987.0 COG0463@1|root,COG0463@2|Bacteria,4NEQ9@976|Bacteroidetes,2G2IE@200643|Bacteroidia,22WXI@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferase family 2 - - - - - - - - - - - - DUF4922,Glycos_transf_2,SpoIID PHJFGMMN_01406 411477.PARMER_04210 4.46e-235 646.0 COG4360@1|root,COG4360@2|Bacteria,4NHAH@976|Bacteroidetes,2FMAC@200643|Bacteroidia,22WKR@171551|Porphyromonadaceae 976|Bacteroidetes F Domain of unknown function (DUF4922) - - - - - - - - - - - - DUF4922 PHJFGMMN_01407 411477.PARMER_04209 0.0 877.0 COG0477@1|root,COG2814@2|Bacteria,4NG5F@976|Bacteroidetes,2FPA7@200643|Bacteroidia,22WH2@171551|Porphyromonadaceae 976|Bacteroidetes EGP BT1 family - - - ko:K08218 ko01501,map01501 M00628 - - ko00000,ko00001,ko00002,ko02000 2.A.1.25 - - BT1,MFS_1 PHJFGMMN_01408 411477.PARMER_04208 3.88e-203 562.0 COG2971@1|root,COG2971@2|Bacteria,4NEV4@976|Bacteroidetes,2FNFM@200643|Bacteroidia,22WIC@171551|Porphyromonadaceae 976|Bacteroidetes G Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - BcrAD_BadFG PHJFGMMN_01409 411477.PARMER_04207 0.0 883.0 COG3458@1|root,COG3458@2|Bacteria,4NGH5@976|Bacteroidetes,2FMD6@200643|Bacteroidia,22WER@171551|Porphyromonadaceae 976|Bacteroidetes Q Acetyl xylan esterase (AXE1) - - - - - - - - - - - - AXE1,Glyco_hydro_26 PHJFGMMN_01410 999419.HMPREF1077_02463 2.17e-247 681.0 COG2706@1|root,COG2706@2|Bacteria,4NE87@976|Bacteroidetes,2FMKW@200643|Bacteroidia,22XJY@171551|Porphyromonadaceae 976|Bacteroidetes G Lactonase, 7-bladed beta-propeller pgl - 3.1.1.31 ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 M00004,M00006,M00008 R02035 RC00537 ko00000,ko00001,ko00002,ko01000 - - - Lactonase PHJFGMMN_01411 411477.PARMER_04204 3.66e-186 518.0 COG2103@1|root,COG2103@2|Bacteria,4NEPY@976|Bacteroidetes,2FNYH@200643|Bacteroidia,22W3R@171551|Porphyromonadaceae 976|Bacteroidetes G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate murQ - 4.2.1.126 ko:K07106 ko00520,ko01100,map00520,map01100 - R08555 RC00397,RC00746 ko00000,ko00001,ko01000 - - - SIS PHJFGMMN_01413 411477.PARMER_04201 4.42e-130 369.0 2DNHM@1|root,32UIZ@2|Bacteria,4NT16@976|Bacteroidetes,2FN7P@200643|Bacteroidia,22YD3@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1282) - - - - - - - - - - - - DUF1282 PHJFGMMN_01414 411477.PARMER_04200 8.42e-102 295.0 COG0691@1|root,COG0691@2|Bacteria,4NNJU@976|Bacteroidetes,2FQX0@200643|Bacteroidia,22XVF@171551|Porphyromonadaceae 976|Bacteroidetes O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA smpB - - ko:K03664 - - - - ko00000 - - - SmpB PHJFGMMN_01415 411477.PARMER_04199 0.0 2427.0 COG0646@1|root,COG1410@1|root,COG0646@2|Bacteria,COG1410@2|Bacteria,4NFRF@976|Bacteroidetes,2FMI7@200643|Bacteroidia,22WC9@171551|Porphyromonadaceae 976|Bacteroidetes E B12 binding domain metH - 2.1.1.13 ko:K00548 ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230 M00017 R00946,R09365 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 - - - B12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans PHJFGMMN_01416 999419.HMPREF1077_00883 1.35e-209 583.0 28HHD@1|root,2Z7T3@2|Bacteria,4NGWB@976|Bacteroidetes,2FQ08@200643|Bacteroidia,22Y4U@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3810) - - - - - - - - - - - - DUF3810 PHJFGMMN_01417 411477.PARMER_04197 0.0 2326.0 COG0060@1|root,COG0060@2|Bacteria,4NEYT@976|Bacteroidetes,2FM5R@200643|Bacteroidia,22W3E@171551|Porphyromonadaceae 976|Bacteroidetes J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) ileS GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 ko:K01870 ko00970,map00970 M00359,M00360 R03656 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,tRNA-synt_1 PHJFGMMN_01418 411477.PARMER_04196 1.45e-80 239.0 COG1734@1|root,COG1734@2|Bacteria,4NNID@976|Bacteroidetes,2FSI2@200643|Bacteroidia,22XWH@171551|Porphyromonadaceae 976|Bacteroidetes T Molecular chaperone DnaK yocK - - - - - - - - - - - zf-dskA_traR PHJFGMMN_01419 411477.PARMER_04195 2.25e-123 352.0 COG0597@1|root,COG0597@2|Bacteria,4NEZN@976|Bacteroidetes,2FS30@200643|Bacteroidia,22XTH@171551|Porphyromonadaceae 976|Bacteroidetes MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins lspA - 3.4.23.36 ko:K03101 ko03060,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_A8 PHJFGMMN_01420 411477.PARMER_04194 1.02e-191 532.0 2EK3P@1|root,33DU3@2|Bacteria,4NU68@976|Bacteroidetes,2FMUD@200643|Bacteroidia,22YCH@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4296) - - - - - - - - - - - - DUF4296 PHJFGMMN_01422 411477.PARMER_04193 2.22e-184 512.0 COG0566@1|root,COG0566@2|Bacteria,4NG1U@976|Bacteroidetes,2FNE2@200643|Bacteroidia,22WK6@171551|Porphyromonadaceae 976|Bacteroidetes J RNA methyltransferase aviRb - - ko:K03437 - - - - ko00000,ko03016 - - - SpoU_methylase,SpoU_sub_bind PHJFGMMN_01423 411477.PARMER_04192 0.0 1578.0 COG4775@1|root,COG4775@2|Bacteria,4NE80@976|Bacteroidetes,2FM1J@200643|Bacteroidia,22WAY@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein, OMP85 family - - - - - - - - - - - - Bac_surface_Ag,POTRA PHJFGMMN_01425 411477.PARMER_04190 0.0 1241.0 COG1166@1|root,COG1166@2|Bacteria,4PKX0@976|Bacteroidetes,2FMN2@200643|Bacteroidia,22W3A@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the biosynthesis of agmatine from arginine speA - 4.1.1.19 ko:K01585 ko00330,ko01100,map00330,map01100 M00133 R00566 RC00299 ko00000,ko00001,ko00002,ko01000 - - - Orn_Arg_deC_N PHJFGMMN_01426 411477.PARMER_04189 1.92e-262 719.0 COG0389@1|root,COG0389@2|Bacteria,4NF1Y@976|Bacteroidetes,2FNAN@200643|Bacteroidia,22VUU@171551|Porphyromonadaceae 976|Bacteroidetes L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII dinB - 2.7.7.7 ko:K02346 - - - - ko00000,ko01000,ko03400 - - - IMS,IMS_C,IMS_HHH PHJFGMMN_01427 411477.PARMER_04188 0.0 1018.0 COG1288@1|root,COG1288@2|Bacteria,4NEUI@976|Bacteroidetes,2FQKK@200643|Bacteroidia,22WMH@171551|Porphyromonadaceae 976|Bacteroidetes S AbgT putative transporter family - - - - - - - - - - - - DcuC PHJFGMMN_01428 411477.PARMER_04187 6.81e-291 796.0 COG1322@1|root,COG1322@2|Bacteria,4NE04@976|Bacteroidetes,2FQ56@200643|Bacteroidia,22XDQ@171551|Porphyromonadaceae 976|Bacteroidetes S RmuC family rmuC - - ko:K09760 - - - - ko00000 - - - RmuC PHJFGMMN_01429 411477.PARMER_04186 3.21e-115 330.0 COG2077@1|root,COG2077@2|Bacteria,4NNGR@976|Bacteroidetes,2FSI3@200643|Bacteroidia,22XVV@171551|Porphyromonadaceae 976|Bacteroidetes O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides tpx - 1.11.1.15 ko:K11065 - - - - ko00000,ko01000 - - - Redoxin PHJFGMMN_01430 411477.PARMER_04184 9.03e-162 453.0 COG0745@1|root,COG0745@2|Bacteria,4NGNK@976|Bacteroidetes,2FNUC@200643|Bacteroidia,22ZQ4@171551|Porphyromonadaceae 976|Bacteroidetes T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - - - - - - - - - - Response_reg,Trans_reg_C PHJFGMMN_01431 411477.PARMER_04183 0.0 999.0 COG0642@1|root,COG2205@2|Bacteria,4NISE@976|Bacteroidetes,2G0BB@200643|Bacteroidia 976|Bacteroidetes T histidine kinase DNA gyrase B - - 2.7.13.3 ko:K07636 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA PHJFGMMN_01432 411477.PARMER_04182 0.0 1478.0 COG1629@1|root,COG1629@2|Bacteria,4P2AA@976|Bacteroidetes,2FNFC@200643|Bacteroidia,23229@171551|Porphyromonadaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - OMP_b-brl_3 PHJFGMMN_01433 411477.PARMER_04181 2.05e-81 241.0 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation - - - - - - - - - - - - Bac_DNA_binding PHJFGMMN_01434 411477.PARMER_04180 0.0 1383.0 COG5545@1|root,COG5545@2|Bacteria,4NZWD@976|Bacteroidetes,2G30T@200643|Bacteroidia,231ZD@171551|Porphyromonadaceae 976|Bacteroidetes S VirE N-terminal domain - - - - - - - - - - - - DUF3874,VirE,VirE_N PHJFGMMN_01435 411477.PARMER_04178 0.0 1479.0 COG1203@1|root,COG1203@2|Bacteria,4NFZ0@976|Bacteroidetes,2FPYD@200643|Bacteroidia,22YEC@171551|Porphyromonadaceae 976|Bacteroidetes L CRISPR-associated endonuclease Cas3-HD - - - ko:K07012 - - - - ko00000,ko01000,ko02048 - - - DEAD,HD,Helicase_C,ResIII PHJFGMMN_01436 696281.Desru_1409 2.12e-36 125.0 COG1343@1|root,COG1343@2|Bacteria,1VAV3@1239|Firmicutes,24NZP@186801|Clostridia,2625X@186807|Peptococcaceae 186801|Clostridia L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette cas2 - - ko:K09951 - - - - ko00000,ko02048 - - - CRISPR_Cas2 PHJFGMMN_01437 411477.PARMER_04171 3.35e-246 676.0 COG1518@1|root,COG1518@2|Bacteria,4NRQB@976|Bacteroidetes,2G37T@200643|Bacteroidia,22Z9N@171551|Porphyromonadaceae 976|Bacteroidetes L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette cas1 - - ko:K15342 - - - - ko00000,ko02048,ko03400 - - - Cas_Cas1,Cas_Cas4 PHJFGMMN_01438 411477.PARMER_04170 2.15e-165 461.0 COG1468@1|root,COG1468@2|Bacteria,4P2GQ@976|Bacteroidetes,2FMX4@200643|Bacteroidia,23079@171551|Porphyromonadaceae 976|Bacteroidetes L Domain of unknown function DUF83 cas4 - 3.1.12.1 ko:K07464 - - - - ko00000,ko01000,ko02048 - - - Cas_Cas4 PHJFGMMN_01439 411477.PARMER_04169 1.66e-211 583.0 COG3649@1|root,COG3649@2|Bacteria,4NNSG@976|Bacteroidetes,2FVKD@200643|Bacteroidia,22Z1R@171551|Porphyromonadaceae 976|Bacteroidetes L CRISPR-associated protein Cas7 - - - ko:K19115,ko:K19118 - - - - ko00000,ko02048 - - - Cas_Cas7 PHJFGMMN_01440 411477.PARMER_04168 0.0 1175.0 28HN3@1|root,2Z7WH@2|Bacteria,4NK6U@976|Bacteroidetes,2FQZA@200643|Bacteroidia,22ZKA@171551|Porphyromonadaceae 976|Bacteroidetes S CRISPR-associated protein, Csd1 family csd1 - - ko:K19117 - - - - ko00000,ko02048 - - - Cas_Csd1 PHJFGMMN_01441 411477.PARMER_04167 6.16e-167 466.0 2DBAF@1|root,2Z82V@2|Bacteria,4NNES@976|Bacteroidetes,2FS4A@200643|Bacteroidia,22ZTK@171551|Porphyromonadaceae 976|Bacteroidetes S CRISPR-associated protein (Cas_Cas5) cas5d - - ko:K19119 - - - - ko00000,ko02048 - - - Cas_Cas5d PHJFGMMN_01442 411477.PARMER_04160 6.49e-304 829.0 COG0534@1|root,COG0534@2|Bacteria,4NG7Q@976|Bacteroidetes,2FN68@200643|Bacteroidia,22WPA@171551|Porphyromonadaceae 976|Bacteroidetes V Mate efflux family protein dinF - - ko:K03327 - - - - ko00000,ko02000 2.A.66.1 - - MatE PHJFGMMN_01444 411477.PARMER_04157 0.0 1135.0 COG1960@1|root,COG1960@2|Bacteria,4NEHA@976|Bacteroidetes,2FM28@200643|Bacteroidia,2301A@171551|Porphyromonadaceae 976|Bacteroidetes I Acyl-CoA dehydrogenase C terminal acd - - - - - - - - - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N,AcylCoA_dehyd_C PHJFGMMN_01445 411477.PARMER_04156 7.92e-247 677.0 COG2025@1|root,COG2025@2|Bacteria,4NFSE@976|Bacteroidetes,2FMEK@200643|Bacteroidia,22W4A@171551|Porphyromonadaceae 976|Bacteroidetes C Electron transfer flavoprotein etfA - - ko:K03522 - - - - ko00000,ko04147 - - - ETF,ETF_alpha PHJFGMMN_01446 411477.PARMER_04155 2.86e-214 592.0 COG2086@1|root,COG2086@2|Bacteria,4NFWB@976|Bacteroidetes,2FMG3@200643|Bacteroidia,22W81@171551|Porphyromonadaceae 976|Bacteroidetes C Electron transfer flavoprotein etfB - - ko:K03521 - - - - ko00000 - - - ETF PHJFGMMN_01447 411477.PARMER_04153 0.0 1904.0 COG0403@1|root,COG1003@1|root,COG0403@2|Bacteria,COG1003@2|Bacteria,4NEDE@976|Bacteroidetes,2FKZJ@200643|Bacteroidia,22W2V@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the GcvP family gcvP - 1.4.4.2 ko:K00281,ko:K00283 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 M00532 R01221,R03425 RC00022,RC00929,RC02834,RC02880 ko00000,ko00001,ko00002,ko01000 - - - Aminotran_5,GDC-P PHJFGMMN_01448 411477.PARMER_04152 2.84e-156 437.0 COG0491@1|root,COG0491@2|Bacteria,4NE2Y@976|Bacteroidetes,2FSQ1@200643|Bacteroidia,22XXM@171551|Porphyromonadaceae 976|Bacteroidetes P metallo-beta-lactamase - - - - - - - - - - - - Lactamase_B PHJFGMMN_01449 411477.PARMER_04151 1.19e-158 444.0 COG0357@1|root,COG0357@2|Bacteria,4NEJG@976|Bacteroidetes,2FMRQ@200643|Bacteroidia,22X1I@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically methylates the N7 position of a guanine in 16S rRNA rsmG GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 ko:K03501 - - - - ko00000,ko01000,ko03009,ko03036 - - - GidB PHJFGMMN_01450 411477.PARMER_04150 2.24e-205 568.0 2CPS1@1|root,32SJR@2|Bacteria,4NTZ6@976|Bacteroidetes,2FPC8@200643|Bacteroidia,22Y5W@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3298) - - - - - - - - - - - - DUF3298,DUF4163 PHJFGMMN_01451 999419.HMPREF1077_00914 3.29e-192 533.0 COG1477@1|root,COG1477@2|Bacteria,4NQ1T@976|Bacteroidetes,2FRR5@200643|Bacteroidia,2307Z@171551|Porphyromonadaceae 976|Bacteroidetes H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein - - 2.7.1.180 ko:K03734 - - - - ko00000,ko01000 - - - ApbE PHJFGMMN_01452 411477.PARMER_04148 0.0 904.0 COG0673@1|root,COG0673@2|Bacteria,4NFFJ@976|Bacteroidetes,2FQ50@200643|Bacteroidia,22ZX6@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C PHJFGMMN_01453 411477.PARMER_04147 8.3e-46 147.0 2EHKR@1|root,33BCH@2|Bacteria,4NXHF@976|Bacteroidetes,2FVUB@200643|Bacteroidia,23198@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01454 411477.PARMER_04145 0.0 1414.0 COG3533@1|root,COG3533@2|Bacteria,4NG7T@976|Bacteroidetes,2FPXE@200643|Bacteroidia,22WGE@171551|Porphyromonadaceae 976|Bacteroidetes S Beta-L-arabinofuranosidase, GH127 - - - - - - - - - - - - Glyco_hydro_127 PHJFGMMN_01455 411477.PARMER_04144 0.0 2529.0 COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,2FM2N@200643|Bacteroidia,22X4F@171551|Porphyromonadaceae 976|Bacteroidetes T Y_Y_Y domain - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y PHJFGMMN_01456 411477.PARMER_04143 0.0 1431.0 COG3533@1|root,COG3533@2|Bacteria,4NG7T@976|Bacteroidetes,2FPXE@200643|Bacteroidia,22WKF@171551|Porphyromonadaceae 976|Bacteroidetes S Beta-L-arabinofuranosidase, GH127 - - - - - - - - - - - - Glyco_hydro_127 PHJFGMMN_01457 411477.PARMER_04142 0.0 1306.0 COG3533@1|root,COG3533@2|Bacteria,4NFW3@976|Bacteroidetes,2FM1I@200643|Bacteroidia,22WXF@171551|Porphyromonadaceae 976|Bacteroidetes S Beta-L-arabinofuranosidase, GH127 - - - ko:K09955 - - - - ko00000 - - - Glyco_hydro_127 PHJFGMMN_01458 411477.PARMER_04141 0.0 1100.0 COG3408@1|root,COG3408@2|Bacteria,4NGV6@976|Bacteroidetes,2FPWP@200643|Bacteroidia,22W1W@171551|Porphyromonadaceae 976|Bacteroidetes G Glycogen debranching enzyme hypBA2 - - - - - - - - - - - BNR_2,GDE_C PHJFGMMN_01459 411477.PARMER_04140 0.0 1122.0 COG0702@1|root,COG0702@2|Bacteria,4PKTF@976|Bacteroidetes,2G0HN@200643|Bacteroidia,231PE@171551|Porphyromonadaceae 976|Bacteroidetes GM SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_01460 411477.PARMER_04139 0.0 2159.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FW53@200643|Bacteroidia,22W05@171551|Porphyromonadaceae 976|Bacteroidetes H TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_01461 411477.PARMER_04138 6.35e-229 630.0 COG3712@1|root,COG3712@2|Bacteria,4NKNV@976|Bacteroidetes,2FQUH@200643|Bacteroidia,22ZEF@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_01462 411477.PARMER_04136 6.73e-133 377.0 COG1595@1|root,COG1595@2|Bacteria,4NWCP@976|Bacteroidetes,2G33Z@200643|Bacteroidia,231ZX@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_01463 411477.PARMER_04135 3.96e-126 359.0 COG1595@1|root,COG1595@2|Bacteria,4NNU4@976|Bacteroidetes,2FS22@200643|Bacteroidia,22Y62@171551|Porphyromonadaceae 976|Bacteroidetes K COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_01465 411477.PARMER_04131 0.0 936.0 28KYZ@1|root,2ZAEB@2|Bacteria,4NHBZ@976|Bacteroidetes,2FP4X@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - PHJFGMMN_01466 411477.PARMER_04130 0.0 1005.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 PHJFGMMN_01467 411477.PARMER_04129 1.25e-239 658.0 COG3712@1|root,COG3712@2|Bacteria,4NN1C@976|Bacteroidetes,2FMQZ@200643|Bacteroidia,22Y05@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_01468 411477.PARMER_04128 0.0 2321.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,22ZUR@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_01469 411477.PARMER_04127 0.0 1259.0 COG1435@1|root,COG1435@2|Bacteria,4NE0S@976|Bacteroidetes,2FMZF@200643|Bacteroidia,2301H@171551|Porphyromonadaceae 976|Bacteroidetes F Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_01470 411477.PARMER_04126 9.35e-157 440.0 28IVF@1|root,2ZHV4@2|Bacteria,4NMPY@976|Bacteroidetes,2FTMS@200643|Bacteroidia,22ZK1@171551|Porphyromonadaceae 976|Bacteroidetes N Protein of unknown function (DUF3823) - - - - - - - - - - - - DUF3823 PHJFGMMN_01471 411477.PARMER_04124 0.0 2029.0 COG3250@1|root,COG3507@1|root,COG3250@2|Bacteria,COG3507@2|Bacteria,4NHZW@976|Bacteroidetes,2FM56@200643|Bacteroidia,22VZQ@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 43 arbA_2 - 3.2.1.99 ko:K06113 - - - - ko00000,ko01000 - GH43 - Glyco_hydro_43 PHJFGMMN_01472 411477.PARMER_04123 0.0 1277.0 COG3250@1|root,COG3250@2|Bacteria,4NFPC@976|Bacteroidetes,2FPUZ@200643|Bacteroidia,22WX3@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 2 family - - - - - - - - - - - - Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N PHJFGMMN_01473 999419.HMPREF1077_00921 0.0 1274.0 COG3250@1|root,COG3250@2|Bacteria,4NFPC@976|Bacteroidetes,2G2Q9@200643|Bacteroidia,231H6@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 2, TIM barrel domain - - - - - - - - - - - - Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N PHJFGMMN_01474 411477.PARMER_04121 1.72e-142 402.0 28H5J@1|root,2Z7I5@2|Bacteria,4NHK6@976|Bacteroidetes,2FM8F@200643|Bacteroidia,22XQ4@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4290) - - - - - - - - - - - - DUF4290 PHJFGMMN_01475 411477.PARMER_04120 1.19e-312 852.0 COG0766@1|root,COG0766@2|Bacteria,4NDV8@976|Bacteroidetes,2FNYN@200643|Bacteroidia,22WZU@171551|Porphyromonadaceae 976|Bacteroidetes M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine murA - 2.5.1.7 ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 - R00660 RC00350 ko00000,ko00001,ko01000,ko01011 - - - EPSP_synthase PHJFGMMN_01476 411477.PARMER_04119 4.7e-120 343.0 COG0806@1|root,COG0806@2|Bacteria,4NQF0@976|Bacteroidetes,2FMK1@200643|Bacteroidia,22YBJ@171551|Porphyromonadaceae 976|Bacteroidetes J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes rimM - - ko:K02860 - - - - ko00000,ko03009 - - - PRC,RimM PHJFGMMN_01477 411477.PARMER_04118 1.32e-193 538.0 COG0739@1|root,COG0739@2|Bacteria,4NFZN@976|Bacteroidetes,2FMIQ@200643|Bacteroidia,22XKT@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family M23 nlpD_1 - - - - - - - - - - - Peptidase_M23 PHJFGMMN_01478 411477.PARMER_04117 6.04e-271 742.0 COG0743@1|root,COG0743@2|Bacteria,4NG0S@976|Bacteroidetes,2FN5M@200643|Bacteroidia,22W5M@171551|Porphyromonadaceae 976|Bacteroidetes I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) dxr GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05688 RC01452 ko00000,ko00001,ko00002,ko01000 - - - DXPR_C,DXP_redisom_C,DXP_reductoisom PHJFGMMN_01479 411477.PARMER_04116 0.0 887.0 COG0750@1|root,COG0750@2|Bacteria,4NEAR@976|Bacteroidetes,2FM5E@200643|Bacteroidia,22X5U@171551|Porphyromonadaceae 976|Bacteroidetes M zinc metalloprotease rseP - - ko:K11749 ko02024,ko04112,map02024,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - PDZ,PDZ_2,Peptidase_M50 PHJFGMMN_01480 411477.PARMER_04115 3.56e-161 451.0 COG0132@1|root,COG0132@2|Bacteria,4NGKI@976|Bacteroidetes,2FM6V@200643|Bacteroidia,22XR0@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring bioD - 6.3.3.3 ko:K01935 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R03182 RC00868 ko00000,ko00001,ko00002,ko01000 - - - AAA_26 PHJFGMMN_01481 411477.PARMER_04114 9.83e-187 518.0 COG4106@1|root,COG4106@2|Bacteria,4PKFJ@976|Bacteroidetes,2G3FE@200643|Bacteroidia,22Y6P@171551|Porphyromonadaceae 976|Bacteroidetes H Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway bioC - 2.1.1.197 ko:K02169 ko00780,ko01100,map00780,map01100 M00572 R09543 RC00003,RC00460 ko00000,ko00001,ko00002,ko01000 - - - Methyltransf_11,Methyltransf_23 PHJFGMMN_01482 411477.PARMER_04113 1.07e-169 472.0 COG2830@1|root,COG2830@2|Bacteria,4NSQK@976|Bacteroidetes,2FTTG@200643|Bacteroidia,22YIE@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF452) - - 3.1.1.85 ko:K09789 ko00780,ko01100,map00780,map01100 M00572 R09725 RC00460,RC00461 ko00000,ko00001,ko00002,ko01000 - - - DUF452 PHJFGMMN_01483 411477.PARMER_04112 8.32e-276 754.0 COG0156@1|root,COG0156@2|Bacteria,4NEXI@976|Bacteroidetes,2FM2U@200643|Bacteroidia,22X1Z@171551|Porphyromonadaceae 976|Bacteroidetes E 8-amino-7-oxononanoate synthase bioF - 2.3.1.29,2.3.1.47 ko:K00639,ko:K00652 ko00260,ko00780,ko01100,map00260,map00780,map01100 M00123,M00573,M00577 R00371,R03210,R10124 RC00004,RC00039,RC00394,RC02725 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2 PHJFGMMN_01484 411477.PARMER_04111 0.0 868.0 COG0161@1|root,COG0161@2|Bacteria,4NEJN@976|Bacteroidetes,2FNNH@200643|Bacteroidia,22W4J@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor bioA - 2.6.1.62 ko:K00833 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R03231 RC00006,RC00887 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3 PHJFGMMN_01485 411477.PARMER_04110 8.13e-238 653.0 COG0502@1|root,COG0502@2|Bacteria,4NEMA@976|Bacteroidetes,2FN6Q@200643|Bacteroidia,22WH5@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism bioB - 2.8.1.6 ko:K01012 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R01078 RC00441 ko00000,ko00001,ko00002,ko01000 - - - BATS,Radical_SAM PHJFGMMN_01486 411477.PARMER_04109 1.14e-96 281.0 28YFF@1|root,32NQS@2|Bacteria,4P9U6@976|Bacteroidetes,2FVGN@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01487 411477.PARMER_04108 0.0 988.0 COG3104@1|root,COG3104@2|Bacteria,4NE8R@976|Bacteroidetes,2FNB6@200643|Bacteroidia,22WY5@171551|Porphyromonadaceae 976|Bacteroidetes E amino acid peptide transporter - - - ko:K03305 - - - - ko00000 2.A.17 - - PTR2 PHJFGMMN_01488 411477.PARMER_04107 8.24e-248 681.0 28M15@1|root,2ZAG0@2|Bacteria,4NJBY@976|Bacteroidetes,2FMGZ@200643|Bacteroidia,22WHH@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4831) - - - - - - - - - - - - DUF4831 PHJFGMMN_01489 411477.PARMER_04105 0.0 897.0 COG0457@1|root,COG0457@2|Bacteria,4NRRJ@976|Bacteroidetes,2FNWU@200643|Bacteroidia,231DJ@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_12,TPR_8 PHJFGMMN_01490 411477.PARMER_04103 0.0 984.0 COG0062@1|root,COG0063@1|root,COG0062@2|Bacteria,COG0063@2|Bacteria,4NG2F@976|Bacteroidetes,2FQ4K@200643|Bacteroidia,22W49@171551|Porphyromonadaceae 976|Bacteroidetes H Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration nnrD - 4.2.1.136,5.1.99.6 ko:K17758,ko:K17759 - - - - ko00000,ko01000 - - - Carb_kinase,YjeF_N PHJFGMMN_01492 411477.PARMER_04101 1.01e-175 490.0 COG0548@1|root,COG0548@2|Bacteria,4NDY8@976|Bacteroidetes,2FN66@200643|Bacteroidia,22VYC@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the acetylglutamate kinase family. ArgB subfamily argB GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R02649 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase PHJFGMMN_01493 411477.PARMER_04100 0.0 976.0 COG1119@1|root,COG1119@2|Bacteria,4NEWY@976|Bacteroidetes,2FMN3@200643|Bacteroidia,22X6F@171551|Porphyromonadaceae 976|Bacteroidetes P ATPases associated with a variety of cellular activities modF - - ko:K05776 ko02010,map02010 M00189 - - ko00000,ko00001,ko00002,ko02000 - - - ABC_tran PHJFGMMN_01494 411477.PARMER_04099 0.0 1159.0 28KYZ@1|root,2ZAEB@2|Bacteria,4NHBZ@976|Bacteroidetes,2FP4X@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - PHJFGMMN_01495 411477.PARMER_04098 0.0 994.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 PHJFGMMN_01496 411477.PARMER_04097 3.08e-208 575.0 2DVAF@1|root,33V17@2|Bacteria,4P2JG@976|Bacteroidetes,2FSVS@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01497 411477.PARMER_04096 0.0 1041.0 COG2956@1|root,COG2956@2|Bacteria,4PKB7@976|Bacteroidetes,2G0HM@200643|Bacteroidia 976|Bacteroidetes G SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_01498 411477.PARMER_04095 0.0 1971.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM37@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_01499 411477.PARMER_04094 2.14e-279 763.0 COG1672@1|root,COG1672@2|Bacteria,4NGM3@976|Bacteroidetes,2FM92@200643|Bacteroidia,22WF5@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:Arch_ATPase - - - ko:K06921 - - - - ko00000 - - - ATPase_2 PHJFGMMN_01500 411477.PARMER_04093 0.0 935.0 COG3193@1|root,COG3193@2|Bacteria,4NHC0@976|Bacteroidetes,2FNQR@200643|Bacteroidia,2324E@171551|Porphyromonadaceae 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_01501 411477.PARMER_04092 0.0 1896.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2G3FU@200643|Bacteroidia,2324D@171551|Porphyromonadaceae 976|Bacteroidetes P Psort location OuterMembrane, score - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_01502 999419.HMPREF1077_00953 0.0 2062.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM37@200643|Bacteroidia,22WEP@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent Receptor Plug Domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_01503 411477.PARMER_04090 0.0 1059.0 COG1834@1|root,COG1834@2|Bacteria,4NFQ7@976|Bacteroidetes,2FNG1@200643|Bacteroidia,22ZB2@171551|Porphyromonadaceae 976|Bacteroidetes E SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_01504 411477.PARMER_04089 1.15e-281 769.0 COG4974@1|root,COG4974@2|Bacteria,4NMPM@976|Bacteroidetes,2FMU8@200643|Bacteroidia,23033@171551|Porphyromonadaceae 976|Bacteroidetes L Arm DNA-binding domain - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_01505 411477.PARMER_04088 0.0 1058.0 COG3666@1|root,COG3666@2|Bacteria,4NEDD@976|Bacteroidetes,2FNIQ@200643|Bacteroidia,22WUY@171551|Porphyromonadaceae 976|Bacteroidetes L COG3666 Transposase and inactivated derivatives - - - - - - - - - - - - DDE_Tnp_1,DDE_Tnp_1_6,DUF772 PHJFGMMN_01506 411477.PARMER_04086 6.5e-306 834.0 COG2256@1|root,COG2256@2|Bacteria,4NEV8@976|Bacteroidetes,2FNF4@200643|Bacteroidia,22W72@171551|Porphyromonadaceae 976|Bacteroidetes L ATPase (AAA rarA - - ko:K07478 - - - - ko00000 - - - AAA,AAA_assoc_2,MgsA_C,RuvB_N PHJFGMMN_01507 411477.PARMER_04085 2.4e-256 702.0 COG1932@1|root,COG1932@2|Bacteria,4NE06@976|Bacteroidetes,2FMET@200643|Bacteroidia,22WAK@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine serC - 2.6.1.52 ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 M00020,M00124 R04173,R05085 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_5 PHJFGMMN_01508 411477.PARMER_04084 3.08e-212 587.0 COG1052@1|root,COG1052@2|Bacteria,4NFDE@976|Bacteroidetes,2FP6R@200643|Bacteroidia,22WZN@171551|Porphyromonadaceae 976|Bacteroidetes CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family serA - 1.1.1.399,1.1.1.95 ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R01513 RC00031 ko00000,ko00001,ko00002,ko01000,ko04147 - - - 2-Hacid_dh,2-Hacid_dh_C PHJFGMMN_01509 411477.PARMER_04083 1.36e-306 835.0 COG4198@1|root,COG4198@2|Bacteria,4NGQH@976|Bacteroidetes,2FN23@200643|Bacteroidia,22VYG@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1015) - - - - - - - - - - - - DUF1015 PHJFGMMN_01510 411477.PARMER_04082 3.33e-153 429.0 COG1011@1|root,COG1011@2|Bacteria,4NQT8@976|Bacteroidetes,2FMXN@200643|Bacteroidia,22Y2Q@171551|Porphyromonadaceae 976|Bacteroidetes S Haloacid dehalogenase-like hydrolase - GO:0003674,GO:0003824,GO:0006766,GO:0006767,GO:0006771,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042578,GO:0042726,GO:0042727,GO:0043726,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.1.3.10,3.1.3.104 ko:K07025,ko:K20866,ko:K21063 ko00010,ko00740,ko01100,ko01110,ko01120,map00010,map00740,map01100,map01110,map01120 M00125 R00947,R07280 RC00017,RC00078 ko00000,ko00001,ko00002,ko01000 - - - HAD_2,Hydrolase PHJFGMMN_01511 411477.PARMER_04080 3.81e-253 694.0 COG1087@1|root,COG1087@2|Bacteria,4NEM9@976|Bacteroidetes,2FMV2@200643|Bacteroidia,22X6S@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the NAD(P)-dependent epimerase dehydratase family galE - 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 - - - Epimerase,GDP_Man_Dehyd PHJFGMMN_01512 411477.PARMER_04079 1.46e-120 345.0 COG4657@1|root,COG4657@2|Bacteria,4NGEZ@976|Bacteroidetes,2FM9J@200643|Bacteroidia,22WWX@171551|Porphyromonadaceae 976|Bacteroidetes C Part of a membrane complex involved in electron transport rnfA - - ko:K03617 - - - - ko00000 - - - Rnf-Nqr PHJFGMMN_01513 411477.PARMER_04078 3.51e-119 342.0 COG4660@1|root,COG4660@2|Bacteria,4NHHP@976|Bacteroidetes,2FM8R@200643|Bacteroidia,22VWQ@171551|Porphyromonadaceae 976|Bacteroidetes C Part of a membrane complex involved in electron transport rnfE - - ko:K03613 - - - - ko00000 - - - Rnf-Nqr PHJFGMMN_01514 411477.PARMER_04077 5.7e-134 381.0 COG4659@1|root,COG4659@2|Bacteria,4NP1D@976|Bacteroidetes,2FM22@200643|Bacteroidia,22Y0Q@171551|Porphyromonadaceae 976|Bacteroidetes C Part of a membrane complex involved in electron transport rnfG - - ko:K03612 - - - - ko00000 - - - FMN_bind PHJFGMMN_01515 411477.PARMER_04076 2.03e-223 616.0 COG4658@1|root,COG4658@2|Bacteria,4NESE@976|Bacteroidetes,2FM2Y@200643|Bacteroidia,22XDK@171551|Porphyromonadaceae 976|Bacteroidetes C Part of a membrane complex involved in electron transport rnfD - - ko:K03614 - - - - ko00000 - - - NQR2_RnfD_RnfE PHJFGMMN_01516 411477.PARMER_04075 2.25e-301 824.0 COG4656@1|root,COG4656@2|Bacteria,4NIS7@976|Bacteroidetes,2FMAQ@200643|Bacteroidia,22WJW@171551|Porphyromonadaceae 976|Bacteroidetes C Part of a membrane complex involved in electron transport rnfC - - ko:K03615 - - - - ko00000 - - - Complex1_51K,Fer4_10,Fer4_17,Fer4_8,RnfC_N,SLBB PHJFGMMN_01517 411477.PARMER_04074 1.33e-200 560.0 COG1148@1|root,COG2878@1|root,COG1148@2|Bacteria,COG2878@2|Bacteria,4NFEB@976|Bacteroidetes,2FMPN@200643|Bacteroidia,22XEE@171551|Porphyromonadaceae 976|Bacteroidetes C Ferredoxin rnfB - - ko:K03616 - - - - ko00000 - - - FeS,Fer4 PHJFGMMN_01518 999419.HMPREF1077_00967 5.98e-100 290.0 COG3086@1|root,COG3086@2|Bacteria,4NV0R@976|Bacteroidetes,2FS4Y@200643|Bacteroidia,22YNS@171551|Porphyromonadaceae 976|Bacteroidetes T Positive regulator of sigma(E), RseC MucC - - - ko:K03803 - - - - ko00000,ko03021 - - - RseC_MucC PHJFGMMN_01519 411477.PARMER_04072 0.0 1060.0 2DBZ9@1|root,2ZC03@2|Bacteria,4NNB6@976|Bacteroidetes,2G1AM@200643|Bacteroidia,231XK@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3078) - - - - - - - - - - - - DUF3078 PHJFGMMN_01521 999419.HMPREF1077_00969 2.92e-20 89.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN9Q@200643|Bacteroidia,22ZZT@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD PHJFGMMN_01522 411477.PARMER_04068 1.97e-124 354.0 COG0634@1|root,COG0634@2|Bacteria,4NNIB@976|Bacteroidetes,2FN5J@200643|Bacteroidia,22Y0N@171551|Porphyromonadaceae 976|Bacteroidetes F Hypoxanthine phosphoribosyltransferase hpt - 2.4.2.8 ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 - R00190,R01132,R01229,R02142,R08237,R08238,R08245 RC00063,RC00122 ko00000,ko00001,ko01000 - - - Pribosyltran PHJFGMMN_01523 411477.PARMER_04067 1.94e-129 368.0 COG0563@1|root,COG0563@2|Bacteria,4NG7J@976|Bacteroidetes,2FM8T@200643|Bacteroidia,22XNF@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism adk - 2.7.4.3 ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 M00049 R00127,R01547,R11319 RC00002 ko00000,ko00001,ko00002,ko01000,ko04147 - - - ADK,Pribosyltran PHJFGMMN_01524 411477.PARMER_04066 2.76e-269 738.0 COG0536@1|root,COG0536@2|Bacteria,4NEK4@976|Bacteroidetes,2FM6Z@200643|Bacteroidia,22W3F@171551|Porphyromonadaceae 976|Bacteroidetes S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control obg - - ko:K03979 - - - - ko00000,ko01000,ko03009 - - - GTP1_OBG,MMR_HSR1 PHJFGMMN_01525 411477.PARMER_04065 1.28e-189 527.0 COG1496@1|root,COG1496@2|Bacteria,4NM9H@976|Bacteroidetes,2FN7X@200643|Bacteroidia,22XMH@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the multicopper oxidase YfiH RL5 family - GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016679,GO:0016682,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0046983,GO:0055114 - ko:K05810 - - - - ko00000,ko01000 - - - Cu-oxidase_4 PHJFGMMN_01526 411477.PARMER_04064 1.05e-40 134.0 COG1895@1|root,COG1895@2|Bacteria 2|Bacteria O HEPN domain - - - ko:K09132 - - - - ko00000 - - - HEPN PHJFGMMN_01527 411477.PARMER_04063 5.85e-158 443.0 COG3382@1|root,COG3382@2|Bacteria,4NMUG@976|Bacteroidetes,2FNY7@200643|Bacteroidia,22XQA@171551|Porphyromonadaceae 976|Bacteroidetes S B3/4 domain - - - - - - - - - - - - B3_4 PHJFGMMN_01528 411477.PARMER_04062 9.99e-40 131.0 2DQMQ@1|root,337NM@2|Bacteria,4NX13@976|Bacteroidetes,2FUJV@200643|Bacteroidia,22YU8@171551|Porphyromonadaceae 976|Bacteroidetes S Winged helix-turn-helix domain (DUF2582) - - - - - - - - - - - - DUF2582 PHJFGMMN_01529 411477.PARMER_04061 3.23e-59 183.0 2EGWR@1|root,33ANW@2|Bacteria,4NYKH@976|Bacteroidetes,2FT4M@200643|Bacteroidia,22YZ7@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_01530 411477.PARMER_04060 2.89e-57 178.0 29XCA@1|root,30J23@2|Bacteria,4PHN4@976|Bacteroidetes,2G1IC@200643|Bacteroidia,23189@171551|Porphyromonadaceae 976|Bacteroidetes D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division - - - ko:K09888 - - - - ko00000,ko03036 - - - ZapA PHJFGMMN_01531 411477.PARMER_04059 0.0 913.0 COG1418@1|root,COG1418@2|Bacteria,4NE3V@976|Bacteroidetes,2FKZ6@200643|Bacteroidia,22XBS@171551|Porphyromonadaceae 976|Bacteroidetes S Endoribonuclease that initiates mRNA decay rny - - ko:K18682 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - DUF3552,HD,KH_1 PHJFGMMN_01532 411477.PARMER_04058 0.0 2343.0 COG3250@1|root,COG3250@2|Bacteria,4NF3W@976|Bacteroidetes,2FM0P@200643|Bacteroidia,22VUW@171551|Porphyromonadaceae 976|Bacteroidetes G beta-galactosidase - - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - Bgal_small_N,DUF4981,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N PHJFGMMN_01533 411477.PARMER_04057 1.05e-126 360.0 2ARAZ@1|root,31GKZ@2|Bacteria,4NKJD@976|Bacteroidetes,2FPQT@200643|Bacteroidia,22Y6A@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF3332) - - - - - - - - - - - - DUF3332 PHJFGMMN_01534 411477.PARMER_04056 0.0 1211.0 COG1435@1|root,COG1435@2|Bacteria,4NFWU@976|Bacteroidetes,2FPY4@200643|Bacteroidia,22ZFJ@171551|Porphyromonadaceae 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_01535 411477.PARMER_04055 0.0 2083.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWUI@200643|Bacteroidia,22Z7X@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_01536 411477.PARMER_04053 0.0 2094.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FW4E@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_01537 411477.PARMER_04052 0.0 1094.0 COG1435@1|root,COG1435@2|Bacteria,4NFWU@976|Bacteroidetes,2FNY3@200643|Bacteroidia,22XJ7@171551|Porphyromonadaceae 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_01538 411477.PARMER_04051 0.0 1918.0 COG3250@1|root,COG3250@2|Bacteria,4NHRH@976|Bacteroidetes,2FMR5@200643|Bacteroidia,23008@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF4982) - - - - - - - - - - - - DUF4982,F5_F8_type_C,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N PHJFGMMN_01539 411477.PARMER_04050 1.81e-285 776.0 COG1621@1|root,COG1621@2|Bacteria,4NI6T@976|Bacteroidetes,2FP34@200643|Bacteroidia,2309C@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 43 family - - - - - - - - - - - - Glyco_hydro_32N,Glyco_hydro_43 PHJFGMMN_01540 411477.PARMER_04049 0.0 943.0 COG3119@1|root,COG3119@2|Bacteria,4NEPB@976|Bacteroidetes,2FS4E@200643|Bacteroidia 976|Bacteroidetes P COG COG3119 Arylsulfatase A and related enzymes - - - - - - - - - - - - Sulfatase PHJFGMMN_01541 411477.PARMER_04048 0.0 1181.0 COG0488@1|root,COG0488@2|Bacteria,4NG1W@976|Bacteroidetes,2FMY5@200643|Bacteroidia,22W6R@171551|Porphyromonadaceae 976|Bacteroidetes S glycosyl transferase family 2 - - - ko:K06158 - - - - ko00000,ko03012 - - - ABC_tran,ABC_tran_CTD,ABC_tran_Xtn PHJFGMMN_01542 411477.PARMER_04047 6.67e-282 770.0 COG1820@1|root,COG1820@2|Bacteria,4NK7A@976|Bacteroidetes,2G337@200643|Bacteroidia,231ZU@171551|Porphyromonadaceae 976|Bacteroidetes G Amidohydrolase family - - 3.5.1.25 ko:K01443 ko00520,ko01130,map00520,map01130 - R02059 RC00166,RC00300 ko00000,ko00001,ko01000 - - - Amidohydro_1 PHJFGMMN_01543 411477.PARMER_04046 1.34e-280 766.0 COG1820@1|root,COG1820@2|Bacteria,4NJ35@976|Bacteroidetes,2FMRP@200643|Bacteroidia,22XJK@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the metallo-dependent hydrolases superfamily. NagA family - - 3.5.1.25 ko:K01443 ko00520,ko01130,map00520,map01130 - R02059 RC00166,RC00300 ko00000,ko00001,ko01000 - - - Amidohydro_1 PHJFGMMN_01544 411477.PARMER_04045 0.0 1327.0 COG0363@1|root,COG2120@1|root,COG0363@2|Bacteria,COG2120@2|Bacteria,4NDUN@976|Bacteroidetes,2FM2W@200643|Bacteroidia,22WHT@171551|Porphyromonadaceae 976|Bacteroidetes G glucosamine-6-phosphate deaminase nagB - 3.5.99.6 ko:K02564 ko00520,ko01100,map00520,map01100 - R00765 RC00163 ko00000,ko00001,ko01000 - - - Glucosamine_iso,PIG-L PHJFGMMN_01545 411477.PARMER_04044 1.26e-116 336.0 2924H@1|root,33VNU@2|Bacteria,4P3NC@976|Bacteroidetes,2FQG9@200643|Bacteroidia,230JC@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4251) - - - - - - - - - - - - DUF4251 PHJFGMMN_01546 411477.PARMER_04043 4.48e-170 474.0 COG2045@1|root,COG2045@2|Bacteria,4NG1A@976|Bacteroidetes,2FSD1@200643|Bacteroidia,23094@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the ComB family comB - 3.1.3.71 ko:K05979 ko00680,ko01120,map00680,map01120 M00358 R05789 RC00428 ko00000,ko00001,ko00002,ko01000 - - - 2-ph_phosp PHJFGMMN_01547 411477.PARMER_04041 3.1e-249 684.0 COG0673@1|root,COG0673@2|Bacteria,4NE07@976|Bacteroidetes,2FNUN@200643|Bacteroidia,22X96@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase NAD-binding domain protein - - - ko:K22230 ko00562,ko01120,map00562,map01120 - R09954 RC00182 ko00000,ko00001,ko01000 - - - GFO_IDH_MocA PHJFGMMN_01548 411477.PARMER_04040 4.89e-313 852.0 2E252@1|root,32XC3@2|Bacteria,4NTX9@976|Bacteroidetes,2FNDW@200643|Bacteroidia,22Z00@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3843) - - - - - - - - - - - - DUF3843 PHJFGMMN_01549 411477.PARMER_01847 1.7e-34 151.0 COG5492@1|root,COG5492@2|Bacteria 2|Bacteria N domain, Protein - - - - - - - - - - - - FMN_bind,Flg_new,Glug,WxL PHJFGMMN_01551 411477.PARMER_04036 3.96e-178 496.0 2CC7R@1|root,334IS@2|Bacteria,4NX6W@976|Bacteroidetes,2FVDG@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4469) with IG-like fold - - - - - - - - - - - - DUF4469,HU-DNA_bdg PHJFGMMN_01552 411477.PARMER_04034 1.46e-282 772.0 COG2207@1|root,COG2207@2|Bacteria,4NWJN@976|Bacteroidetes,2FV23@200643|Bacteroidia 976|Bacteroidetes K transcriptional regulator (AraC family) - - - - - - - - - - - - HTH_18 PHJFGMMN_01553 411477.PARMER_04032 0.0 1876.0 COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,4NEIE@976|Bacteroidetes,2FMGF@200643|Bacteroidia,22X3J@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarbopepD_reg_2,OMP_b-brl_3,Plug,TonB_dep_Rec PHJFGMMN_01554 411477.PARMER_04031 0.0 1072.0 COG5492@1|root,COG5492@2|Bacteria,4NH7Q@976|Bacteroidetes,2FN1I@200643|Bacteroidia,22WZ6@171551|Porphyromonadaceae 976|Bacteroidetes N COG NOG06100 non supervised orthologous group - - - - - - - - - - - - TIG PHJFGMMN_01555 999419.HMPREF1077_01001 3.47e-35 126.0 COG2849@1|root,COG2849@2|Bacteria,4NUDS@976|Bacteroidetes,2FTTJ@200643|Bacteroidia,22Z1M@171551|Porphyromonadaceae 976|Bacteroidetes S MORN repeat variant - - - - - - - - - - - - MORN_2 PHJFGMMN_01556 411477.PARMER_04029 0.0 1243.0 COG1368@1|root,COG1368@2|Bacteria,4NFI9@976|Bacteroidetes,2FN88@200643|Bacteroidia,22X9H@171551|Porphyromonadaceae 976|Bacteroidetes M Sulfatase ltaS2 - - - - - - - - - - - Sulfatase PHJFGMMN_01557 411477.PARMER_04028 0.0 1068.0 COG0488@1|root,COG0488@2|Bacteria,4NEHU@976|Bacteroidetes,2FMW7@200643|Bacteroidia,22VV9@171551|Porphyromonadaceae 976|Bacteroidetes S ABC transporter, ATP-binding protein - - - - - - - - - - - - ABC_tran,ABC_tran_Xtn PHJFGMMN_01558 411477.PARMER_04027 0.0 1049.0 COG2234@1|root,COG2234@2|Bacteria,4NE66@976|Bacteroidetes,2FPXP@200643|Bacteroidia,22ZQH@171551|Porphyromonadaceae 976|Bacteroidetes S Peptidase family M28 - - - - - - - - - - - - PA,Peptidase_M28 PHJFGMMN_01559 411477.PARMER_04026 1.28e-179 500.0 COG0716@1|root,COG1149@1|root,COG0716@2|Bacteria,COG1149@2|Bacteria,4NPJC@976|Bacteroidetes,2G08U@200643|Bacteroidia,231PC@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S dicluster domain - - - - - - - - - - - - Fer4 PHJFGMMN_01560 411477.PARMER_04025 1.3e-239 658.0 COG0526@1|root,COG0526@2|Bacteria,4NEX3@976|Bacteroidetes,2FM3J@200643|Bacteroidia,231UD@171551|Porphyromonadaceae 976|Bacteroidetes CO Domain of unknown function (DUF4369) - - - - - - - - - - - - AhpC-TSA,DUF4369 PHJFGMMN_01561 999419.HMPREF1077_01007 1.3e-09 57.8 2DNG4@1|root,32XBP@2|Bacteria,4NUAE@976|Bacteroidetes,2FTVS@200643|Bacteroidia,22ZMR@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01562 999419.HMPREF1077_01007 1.02e-47 157.0 2DNG4@1|root,32XBP@2|Bacteria,4NUAE@976|Bacteroidetes,2FTVS@200643|Bacteroidia,22ZMR@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01563 411477.PARMER_04022 2.89e-100 290.0 COG1188@1|root,COG1188@2|Bacteria,4NP8I@976|Bacteroidetes,2FRYM@200643|Bacteroidia,22Y0I@171551|Porphyromonadaceae 976|Bacteroidetes J S4 domain protein hslR - - ko:K04762 - - - - ko00000,ko03110 - - - S4 PHJFGMMN_01564 411477.PARMER_04021 2.68e-135 382.0 COG0193@1|root,COG0193@2|Bacteria,4NI7N@976|Bacteroidetes,2FN36@200643|Bacteroidia,22VZX@171551|Porphyromonadaceae 976|Bacteroidetes J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis pth - 3.1.1.29 ko:K01056 - - - - ko00000,ko01000,ko03012 - - - Pept_tRNA_hydro PHJFGMMN_01565 411477.PARMER_04020 1.41e-129 369.0 COG1825@1|root,COG1825@2|Bacteria,4NEN6@976|Bacteroidetes,2FN3J@200643|Bacteroidia,22XPV@171551|Porphyromonadaceae 976|Bacteroidetes J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance ctc - - ko:K02897 ko03010,map03010 M00178 - - ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L25p,Ribosomal_TL5_C PHJFGMMN_01566 411477.PARMER_04018 1.16e-204 566.0 COG1028@1|root,COG1028@2|Bacteria,4NN35@976|Bacteroidetes,2FP1K@200643|Bacteroidia,22XQ0@171551|Porphyromonadaceae 976|Bacteroidetes IQ Enoyl-(Acyl carrier protein) reductase - - - - - - - - - - - - adh_short PHJFGMMN_01567 411477.PARMER_04017 1.46e-302 824.0 COG1902@1|root,COG1902@2|Bacteria,4NF98@976|Bacteroidetes,2FNNA@200643|Bacteroidia,22W6P@171551|Porphyromonadaceae 976|Bacteroidetes C NADH:flavin oxidoreductase / NADH oxidase family namA - - - - - - - - - - - Oxidored_FMN PHJFGMMN_01568 411477.PARMER_04016 2.01e-180 501.0 2DBF0@1|root,2Z8VT@2|Bacteria,4NECW@976|Bacteroidetes,2FP7Z@200643|Bacteroidia,22X94@171551|Porphyromonadaceae 976|Bacteroidetes S 3-oxo-5-alpha-steroid 4-dehydrogenase - - 1.3.1.22 ko:K12343 ko00140,map00140 - R02208,R02497,R08954,R10242 RC00145 ko00000,ko00001,ko01000 - - - Steroid_dh PHJFGMMN_01569 411477.PARMER_04015 1.02e-164 461.0 COG0745@1|root,COG0745@2|Bacteria,4NF1I@976|Bacteroidetes,2FNZV@200643|Bacteroidia,22WBV@171551|Porphyromonadaceae 976|Bacteroidetes K COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - - - - - - - - - - Response_reg,Trans_reg_C PHJFGMMN_01570 411477.PARMER_04014 1.31e-67 204.0 COG0347@1|root,COG0347@2|Bacteria,4NSBG@976|Bacteroidetes,2FT39@200643|Bacteroidia,22YG9@171551|Porphyromonadaceae 976|Bacteroidetes E COG NOG19114 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_01571 411477.PARMER_04013 0.0 1916.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FM3B@200643|Bacteroidia,22VY6@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family czcA - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran PHJFGMMN_01572 411477.PARMER_04012 3.87e-239 658.0 COG0845@1|root,COG0845@2|Bacteria,4NF23@976|Bacteroidetes,2FMQJ@200643|Bacteroidia,22VUK@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - HlyD_D23 PHJFGMMN_01573 411477.PARMER_04011 0.0 874.0 COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,2FN2J@200643|Bacteroidia,22WEM@171551|Porphyromonadaceae 976|Bacteroidetes MU outer membrane efflux protein - - - - - - - - - - - - OEP PHJFGMMN_01574 411477.PARMER_04010 1.5e-91 270.0 COG1309@1|root,COG1309@2|Bacteria,4NQ99@976|Bacteroidetes,2FMT3@200643|Bacteroidia,22YJI@171551|Porphyromonadaceae 976|Bacteroidetes K Bacterial regulatory proteins, tetR family - - - - - - - - - - - - TetR_N PHJFGMMN_01575 411477.PARMER_04010 3.54e-20 85.1 COG1309@1|root,COG1309@2|Bacteria,4NQ99@976|Bacteroidetes,2FMT3@200643|Bacteroidia,22YJI@171551|Porphyromonadaceae 976|Bacteroidetes K Bacterial regulatory proteins, tetR family - - - - - - - - - - - - TetR_N PHJFGMMN_01576 411477.PARMER_04009 1.6e-216 597.0 COG2207@1|root,COG2207@2|Bacteria,4NQI6@976|Bacteroidetes,2FU41@200643|Bacteroidia 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_18 PHJFGMMN_01577 411477.PARMER_04008 2.71e-114 328.0 COG3247@1|root,COG3247@2|Bacteria,4NTTU@976|Bacteroidetes,2FP3S@200643|Bacteroidia,22YEM@171551|Porphyromonadaceae 976|Bacteroidetes S Short repeat of unknown function (DUF308) - - - - - - - - - - - - DUF308 PHJFGMMN_01580 411477.PARMER_04003 0.0 1077.0 COG0504@1|root,COG0504@2|Bacteria,4NEWT@976|Bacteroidetes,2FMC4@200643|Bacteroidia,22XB9@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates pyrG - 6.3.4.2 ko:K01937 ko00240,ko01100,map00240,map01100 M00052 R00571,R00573 RC00010,RC00074 ko00000,ko00001,ko00002,ko01000 - - - CTP_synth_N,GATase PHJFGMMN_01581 411477.PARMER_04002 0.0 1229.0 COG0706@1|root,COG0706@2|Bacteria,4NESJ@976|Bacteroidetes,2FN3A@200643|Bacteroidia,22WA9@171551|Porphyromonadaceae 976|Bacteroidetes U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins yidC - - ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044,ko03029 2.A.9 - - 60KD_IMP,YidC_periplas PHJFGMMN_01582 411477.PARMER_04001 4.51e-191 530.0 COG1212@1|root,COG1212@2|Bacteria,4NG4B@976|Bacteroidetes,2FMHD@200643|Bacteroidia,22XG8@171551|Porphyromonadaceae 976|Bacteroidetes M Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria kdsB - 2.7.7.38 ko:K00979 ko00540,ko01100,map00540,map01100 M00063 R03351,R11396 RC00152,RC00910 ko00000,ko00001,ko00002,ko01000,ko01005 - - - CTP_transf_3 PHJFGMMN_01583 411477.PARMER_04000 0.0 1399.0 COG0475@1|root,COG0490@1|root,COG0475@2|Bacteria,COG0490@2|Bacteria,4NGF6@976|Bacteroidetes,2FNTX@200643|Bacteroidia,22WU6@171551|Porphyromonadaceae 976|Bacteroidetes P COG0475 Kef-type K transport systems, membrane components - - - ko:K03455 - - - - ko00000 2.A.37 - - Na_H_Exchanger,TrkA_C PHJFGMMN_01584 411477.PARMER_03999 8.77e-151 424.0 COG2865@1|root,COG2865@2|Bacteria,4NGPG@976|Bacteroidetes,2FMWB@200643|Bacteroidia,22XSV@171551|Porphyromonadaceae 976|Bacteroidetes K Putative DNA-binding domain - - - - - - - - - - - - AlbA_2 PHJFGMMN_01585 411477.PARMER_03998 0.0 894.0 COG1030@1|root,COG1030@2|Bacteria,4NGGV@976|Bacteroidetes,2FP4N@200643|Bacteroidia,22X22@171551|Porphyromonadaceae 976|Bacteroidetes O serine protease - - - ko:K07403 - - - - ko00000 - - - NfeD,Peptidase_S49,SDH_sah PHJFGMMN_01586 411477.PARMER_03997 2.63e-115 330.0 COG1595@1|root,COG1595@2|Bacteria,4NMM3@976|Bacteroidetes,2FNH5@200643|Bacteroidia,22XTV@171551|Porphyromonadaceae 976|Bacteroidetes K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_01587 411477.PARMER_03996 3.79e-250 686.0 COG2008@1|root,COG2008@2|Bacteria,4NEIH@976|Bacteroidetes,2FPGW@200643|Bacteroidia,22WFE@171551|Porphyromonadaceae 976|Bacteroidetes E Threonine aldolase ltaE - 4.1.2.48 ko:K01620 ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230 - R00751,R06171 RC00312,RC00372 ko00000,ko00001,ko01000 - - - Beta_elim_lyase PHJFGMMN_01588 411477.PARMER_03995 0.0 1273.0 COG1408@1|root,COG3568@1|root,COG1408@2|Bacteria,COG3568@2|Bacteria,4NEIF@976|Bacteroidetes,2FMWV@200643|Bacteroidia,22XIF@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos,Metallophos,Pur_ac_phosph_N PHJFGMMN_01589 411477.PARMER_03994 3.28e-312 852.0 COG2233@1|root,COG2233@2|Bacteria,4NG6D@976|Bacteroidetes,2FMKN@200643|Bacteroidia,22XBV@171551|Porphyromonadaceae 976|Bacteroidetes F Permease family pbuX - - ko:K16345 - - - - ko00000,ko02000 2.A.40.4.2 - - Xan_ur_permease PHJFGMMN_01590 411477.PARMER_03993 1.09e-130 371.0 COG0503@1|root,COG0503@2|Bacteria,4NEP0@976|Bacteroidetes,2FP5S@200643|Bacteroidia,22W2M@171551|Porphyromonadaceae 976|Bacteroidetes F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis xpt - 2.4.2.22 ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 - R01229,R02142 RC00063,RC00122 ko00000,ko00001,ko01000 - - - Pribosyltran PHJFGMMN_01591 411477.PARMER_03992 6.16e-121 345.0 COG0406@1|root,COG0406@2|Bacteria,4NPZ0@976|Bacteroidetes,2FPTF@200643|Bacteroidia,22XV2@171551|Porphyromonadaceae 976|Bacteroidetes G Phosphoglycerate mutase family - - 5.4.2.12 ko:K15634,ko:K15640 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000 - - - His_Phos_1 PHJFGMMN_01593 411477.PARMER_03990 8.52e-70 210.0 2E3D8@1|root,32YCF@2|Bacteria,4NUPM@976|Bacteroidetes,2FT2V@200643|Bacteroidia,22YI6@171551|Porphyromonadaceae 976|Bacteroidetes S MerR HTH family regulatory protein - - - - - - - - - - - - MerR_2 PHJFGMMN_01594 411477.PARMER_03989 2.52e-206 571.0 COG0484@1|root,COG0484@2|Bacteria,4NE4X@976|Bacteroidetes,2FP5X@200643|Bacteroidia,22WQ4@171551|Porphyromonadaceae 976|Bacteroidetes O DnaJ molecular chaperone homology domain dnaJ2 - - ko:K03686,ko:K05516 - - - - ko00000,ko03029,ko03036,ko03110 - - - DnaJ,DnaJ_C PHJFGMMN_01596 411477.PARMER_03987 1.47e-49 157.0 298PA@1|root,2ZQYC@2|Bacteria,4P7SE@976|Bacteroidetes,2FTQE@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4248) - - - - - - - - - - - - DUF4248 PHJFGMMN_01598 411477.PARMER_03982 5.75e-135 382.0 COG1309@1|root,COG1309@2|Bacteria,4NNNT@976|Bacteroidetes,2FS2Z@200643|Bacteroidia,22XV6@171551|Porphyromonadaceae 976|Bacteroidetes K tetR family qacR - - - - - - - - - - - TetR_C_5,TetR_N PHJFGMMN_01599 411477.PARMER_03981 6.36e-229 630.0 COG0332@1|root,COG0332@2|Bacteria,4NEWU@976|Bacteroidetes,2FQS4@200643|Bacteroidia,22X1D@171551|Porphyromonadaceae 976|Bacteroidetes I 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal - - 2.3.1.180 ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00082,M00083 R10707 RC00004,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACP_syn_III,ACP_syn_III_C PHJFGMMN_01600 411477.PARMER_03980 1.22e-168 472.0 COG1028@1|root,COG1028@2|Bacteria,4NEAI@976|Bacteroidetes,2FNB4@200643|Bacteroidia,22WN3@171551|Porphyromonadaceae 976|Bacteroidetes IQ reductase fabG - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short_C2 PHJFGMMN_01601 411477.PARMER_03979 1.64e-166 464.0 COG0564@1|root,COG0564@2|Bacteria,4NFS8@976|Bacteroidetes,2FN9G@200643|Bacteroidia,22WC3@171551|Porphyromonadaceae 976|Bacteroidetes J Pseudouridine synthase rluC - 5.4.99.23,5.4.99.28,5.4.99.29 ko:K06177,ko:K06180 - - - - ko00000,ko01000,ko03009,ko03016 - - - PseudoU_synth_2 PHJFGMMN_01602 411477.PARMER_03977 8.82e-213 588.0 COG0697@1|root,COG0697@2|Bacteria,4NGZ3@976|Bacteroidetes,2FP7S@200643|Bacteroidia,22XCP@171551|Porphyromonadaceae 976|Bacteroidetes EG membrane - - - - - - - - - - - - EamA PHJFGMMN_01603 411477.PARMER_03978 2.55e-171 481.0 COG3142@1|root,COG3142@2|Bacteria,4NINY@976|Bacteroidetes,2FN71@200643|Bacteroidia,22XRN@171551|Porphyromonadaceae 976|Bacteroidetes P Participates in the control of copper homeostasis cutC - - ko:K06201 - - - - ko00000 - - - CutC PHJFGMMN_01604 411477.PARMER_03976 6.67e-43 139.0 COG1983@1|root,COG1983@2|Bacteria,4NX1N@976|Bacteroidetes,2FUW2@200643|Bacteroidia,22YYQ@171551|Porphyromonadaceae 976|Bacteroidetes KT PspC domain - - - - - - - - - - - - PspC PHJFGMMN_01605 411477.PARMER_03975 0.0 1315.0 COG0556@1|root,COG0556@2|Bacteria,4NE6E@976|Bacteroidetes,2FNBD@200643|Bacteroidia,22W4K@171551|Porphyromonadaceae 976|Bacteroidetes L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage uvrB - - ko:K03702 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - Helicase_C,ResIII,UVR,UvrB PHJFGMMN_01606 411477.PARMER_03974 4.16e-205 566.0 COG0657@1|root,COG0657@2|Bacteria,4NGAF@976|Bacteroidetes,2FSWW@200643|Bacteroidia,22XU8@171551|Porphyromonadaceae 976|Bacteroidetes I Protein of unknown function (DUF1460) - - - - - - - - - - - - DUF1460 PHJFGMMN_01607 411477.PARMER_03973 0.0 1462.0 28J0I@1|root,2Z8XQ@2|Bacteria,4NK3G@976|Bacteroidetes,2G08X@200643|Bacteroidia,22XSJ@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01608 411477.PARMER_03972 3.65e-158 444.0 COG0664@1|root,COG0664@2|Bacteria,4NFB1@976|Bacteroidetes,2FNHP@200643|Bacteroidia,22WXA@171551|Porphyromonadaceae 976|Bacteroidetes K Crp Fnr family - - - ko:K21556 - - - - ko00000,ko03000 - - - HTH_Crp_2,cNMP_binding PHJFGMMN_01609 411477.PARMER_03971 1.83e-189 526.0 COG2877@1|root,COG2877@2|Bacteria,4NENN@976|Bacteroidetes,2FN47@200643|Bacteroidia,22WRG@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the KdsA family kdsA - 2.5.1.55 ko:K01627 ko00540,ko01100,map00540,map01100 M00063 R03254 RC00435 ko00000,ko00001,ko00002,ko01000,ko01005 - - - DAHP_synth_1 PHJFGMMN_01610 411477.PARMER_03970 4.24e-218 602.0 COG0324@1|root,COG0324@2|Bacteria,4NFJY@976|Bacteroidetes,2FM0H@200643|Bacteroidia,22W45@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) miaA2 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 - R01122 RC02820 ko00000,ko00001,ko01000,ko01006,ko03016 - - - IPPT PHJFGMMN_01611 411477.PARMER_03969 2.65e-223 617.0 COG0057@1|root,COG0057@2|Bacteria,4NEMF@976|Bacteroidetes,2FMT7@200643|Bacteroidia,22WYI@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family gap - 1.2.1.12 ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01061 RC00149 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - Gp_dh_C,Gp_dh_N PHJFGMMN_01612 411477.PARMER_03967 6.96e-83 245.0 2EG77@1|root,339Z4@2|Bacteria,4NYB3@976|Bacteroidetes,2FVKY@200643|Bacteroidia,22YYU@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01613 411477.PARMER_03966 5.07e-79 236.0 2E0ZK@1|root,32WFU@2|Bacteria,4NTTI@976|Bacteroidetes,2FUB3@200643|Bacteroidia,22YHR@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - Phage_holin_3_6 PHJFGMMN_01614 999419.HMPREF1077_01055 4.18e-33 115.0 2EGGF@1|root,33A8G@2|Bacteria,4NXJX@976|Bacteroidetes,2FVM3@200643|Bacteroidia,22Z2H@171551|Porphyromonadaceae 976|Bacteroidetes S YtxH-like protein - - - - - - - - - - - - YtxH PHJFGMMN_01615 411477.PARMER_03964 2.64e-210 580.0 COG2264@1|root,COG2264@2|Bacteria,4NFRW@976|Bacteroidetes,2FP0Q@200643|Bacteroidia,22VXF@171551|Porphyromonadaceae 976|Bacteroidetes J Ribosomal protein L11 methyltransferase prmA - - ko:K02687 - - - - ko00000,ko01000,ko03009 - - - PrmA PHJFGMMN_01616 411477.PARMER_03963 0.0 1337.0 COG1435@1|root,COG1435@2|Bacteria,4NHGD@976|Bacteroidetes,2FPQR@200643|Bacteroidia,22XE9@171551|Porphyromonadaceae 976|Bacteroidetes F Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_01617 411477.PARMER_03962 0.0 2254.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,22VZK@171551|Porphyromonadaceae 976|Bacteroidetes P CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_01618 411477.PARMER_03960 0.0 1869.0 COG4692@1|root,COG4692@2|Bacteria,4PKSV@976|Bacteroidetes,2G3H5@200643|Bacteroidia,2322S@171551|Porphyromonadaceae 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase C-terminal domain - - 3.2.1.40 ko:K05989 - - - - ko00000,ko01000 - - - BNR_2,Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N PHJFGMMN_01619 411477.PARMER_03959 4.75e-67 203.0 COG0261@1|root,COG0261@2|Bacteria,4NQKP@976|Bacteroidetes,2G2BD@200643|Bacteroidia,231IE@171551|Porphyromonadaceae 976|Bacteroidetes J This protein binds to 23S rRNA in the presence of protein L20 rplU - - ko:K02888 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L21p PHJFGMMN_01620 411477.PARMER_03958 3.83e-56 174.0 COG0211@1|root,COG0211@2|Bacteria,4NS7T@976|Bacteroidetes,2FTXU@200643|Bacteroidia,22YG4@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bL27 family rpmA - - ko:K02899 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L27 PHJFGMMN_01621 411477.PARMER_03957 1.14e-128 365.0 COG0791@1|root,COG0791@2|Bacteria,4NQSZ@976|Bacteroidetes,2FS8Y@200643|Bacteroidia,231MA@171551|Porphyromonadaceae 976|Bacteroidetes M NlpC/P60 family mepS - 3.4.17.13 ko:K13694 - - - - ko00000,ko01000,ko01002,ko01011 - - - NLPC_P60 PHJFGMMN_01622 411477.PARMER_03955 1.66e-307 838.0 COG0172@1|root,COG0172@2|Bacteria,4NED6@976|Bacteroidetes,2FN99@200643|Bacteroidia,22WPD@171551|Porphyromonadaceae 976|Bacteroidetes J seryl-tRNA synthetase serS - 6.1.1.11 ko:K01875 ko00970,map00970 M00359,M00360 R03662,R08218 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Seryl_tRNA_N,tRNA-synt_2b PHJFGMMN_01623 411477.PARMER_03953 0.0 1609.0 COG0446@1|root,COG0607@1|root,COG2210@1|root,COG0446@2|Bacteria,COG0607@2|Bacteria,COG2210@2|Bacteria,4PKEU@976|Bacteroidetes,2FKZ0@200643|Bacteroidia,22WZ3@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the sulfur carrier protein TusA family cdr - - - - - - - - - - - DrsE_2,Pyr_redox_2,Pyr_redox_dim,Rhodanese,TusA PHJFGMMN_01624 411477.PARMER_03952 1.27e-83 246.0 COG1846@1|root,COG1846@2|Bacteria,4NU5Q@976|Bacteroidetes,2FTWZ@200643|Bacteroidia,22YFR@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix multiple antibiotic resistance protein - - - - - - - - - - - - HTH_27,MarR,MarR_2 PHJFGMMN_01625 411477.PARMER_03950 6.91e-234 643.0 COG0167@1|root,COG0167@2|Bacteria,4NF4D@976|Bacteroidetes,2FM0X@200643|Bacteroidia,22WFK@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the conversion of dihydroorotate to orotate - - 1.3.98.1 ko:K00226 ko00240,ko01100,map00240,map01100 M00051 R01867 RC00051 ko00000,ko00001,ko00002,ko01000 - - - DHO_dh PHJFGMMN_01626 411477.PARMER_03949 2.71e-159 446.0 COG0325@1|root,COG0325@2|Bacteria,4NE42@976|Bacteroidetes,2FM94@200643|Bacteroidia,22XNT@171551|Porphyromonadaceae 976|Bacteroidetes S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis yggS - - ko:K06997 - - - - ko00000 - - - Ala_racemase_N PHJFGMMN_01627 411477.PARMER_03948 4.54e-111 320.0 2985A@1|root,2ZVB7@2|Bacteria,4NNTB@976|Bacteroidetes,2FPUX@200643|Bacteroidia,22XX1@171551|Porphyromonadaceae 976|Bacteroidetes S Phage tail protein - - - - - - - - - - - - DUF4494 PHJFGMMN_01628 411477.PARMER_03945 4.87e-141 399.0 COG1961@1|root,COG1961@2|Bacteria,4NJM8@976|Bacteroidetes,2G377@200643|Bacteroidia,231VC@171551|Porphyromonadaceae 976|Bacteroidetes L Resolvase, N terminal domain - - - - - - - - - - - - Resolvase PHJFGMMN_01629 411477.PARMER_03944 0.0 1227.0 COG2605@1|root,COG2605@2|Bacteria,4NHF2@976|Bacteroidetes,2FMWG@200643|Bacteroidia,22VW1@171551|Porphyromonadaceae 976|Bacteroidetes S L-fucokinase fkp - - - - - - - - - - - Fucokinase,GHMP_kinases_C,GHMP_kinases_N PHJFGMMN_01630 411477.PARMER_03944 5.83e-242 688.0 COG2605@1|root,COG2605@2|Bacteria,4NHF2@976|Bacteroidetes,2FMWG@200643|Bacteroidia,22VW1@171551|Porphyromonadaceae 976|Bacteroidetes S L-fucokinase fkp - - - - - - - - - - - Fucokinase,GHMP_kinases_C,GHMP_kinases_N PHJFGMMN_01631 411477.PARMER_03943 1.69e-256 704.0 COG3765@1|root,COG3765@2|Bacteria,4P36E@976|Bacteroidetes,2G0AE@200643|Bacteroidia,22X5N@171551|Porphyromonadaceae 976|Bacteroidetes M Chain length determinant protein - - - - - - - - - - - - GNVR,Wzz PHJFGMMN_01632 411477.PARMER_03942 0.0 1533.0 COG1596@1|root,COG1596@2|Bacteria,4NEXJ@976|Bacteroidetes,2FM4E@200643|Bacteroidia,22WXT@171551|Porphyromonadaceae 976|Bacteroidetes M Polysaccharide biosynthesis/export protein kpsD - - - - - - - - - - - Caps_synth_GfcC,Poly_export,SLBB PHJFGMMN_01633 411477.PARMER_03941 4.04e-241 662.0 COG0381@1|root,COG0381@2|Bacteria,4NGBD@976|Bacteroidetes,2FM5D@200643|Bacteroidia,22W64@171551|Porphyromonadaceae 976|Bacteroidetes G UDP-N-acetylglucosamine 2-epimerase - - 5.1.3.14 ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 M00362 R00420 RC00290 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Epimerase_2 PHJFGMMN_01634 411477.PARMER_03940 7.75e-170 474.0 COG1922@1|root,COG1922@2|Bacteria,4NJGT@976|Bacteroidetes,2FPBY@200643|Bacteroidia,22XRP@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the glycosyltransferase 26 family - - 2.4.1.180,2.4.1.187 ko:K02852,ko:K05946 ko05111,map05111 - - - ko00000,ko00001,ko01000,ko01003 - GT26 - Glyco_tran_WecB PHJFGMMN_01635 411477.PARMER_03939 8.01e-97 281.0 COG0110@1|root,COG0110@2|Bacteria,4P6DG@976|Bacteroidetes,2G32B@200643|Bacteroidia 976|Bacteroidetes H Hexapeptide repeat of succinyl-transferase - - - - - - - - - - - - Hexapep_2 PHJFGMMN_01636 411477.PARMER_03937 8.28e-121 352.0 COG3307@1|root,COG3307@2|Bacteria,4NF1G@976|Bacteroidetes,2FSH9@200643|Bacteroidia,230KP@171551|Porphyromonadaceae 976|Bacteroidetes M TupA-like ATPgrasp - - - - - - - - - - - - ATPgrasp_TupA PHJFGMMN_01637 411477.PARMER_03936 1.65e-244 672.0 COG0438@1|root,COG0438@2|Bacteria,4NPNN@976|Bacteroidetes,2FRYN@200643|Bacteroidia,22YQZ@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 PHJFGMMN_01638 411477.PARMER_03935 5.68e-297 811.0 2EP1K@1|root,33GNF@2|Bacteria,4NYEQ@976|Bacteroidetes,2G1S1@200643|Bacteroidia,2315J@171551|Porphyromonadaceae 976|Bacteroidetes S O-antigen ligase like membrane protein - - - - - - - - - - - - O-antigen_lig PHJFGMMN_01639 411477.PARMER_03934 4.19e-239 656.0 COG0438@1|root,COG0438@2|Bacteria,4PIFN@976|Bacteroidetes,2FT6Y@200643|Bacteroidia 976|Bacteroidetes M Glycosyltransferase, group 1 family - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 PHJFGMMN_01640 411477.PARMER_03933 0.0 899.0 COG2244@1|root,COG2244@2|Bacteria,4NEGZ@976|Bacteroidetes,2FNUG@200643|Bacteroidia,22WG6@171551|Porphyromonadaceae 976|Bacteroidetes S Polysaccharide biosynthesis protein - - - - - - - - - - - - MatE,Polysacc_synt PHJFGMMN_01641 411477.PARMER_03932 2.01e-291 795.0 COG0677@1|root,COG0677@2|Bacteria,4NDTW@976|Bacteroidetes,2FMSD@200643|Bacteroidia,22WMZ@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - 1.1.1.336 ko:K02472 ko00520,ko05111,map00520,map05111 - R03317 RC00291 ko00000,ko00001,ko01000 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N PHJFGMMN_01642 411477.PARMER_03931 1.83e-258 710.0 COG0472@1|root,COG0472@2|Bacteria,4NGKM@976|Bacteroidetes,2FM86@200643|Bacteroidia,22W3P@171551|Porphyromonadaceae 976|Bacteroidetes M UDP-N-acetylmuramyl pentapeptide phosphotransferase tagO - - - - - - - - - - - Glycos_transf_4 PHJFGMMN_01643 411477.PARMER_03929 1.11e-284 777.0 COG1835@1|root,COG1835@2|Bacteria,4NEW1@976|Bacteroidetes,2FN9M@200643|Bacteroidia,22W3U@171551|Porphyromonadaceae 976|Bacteroidetes I Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 PHJFGMMN_01644 411477.PARMER_03928 7.37e-133 376.0 COG0664@1|root,COG0664@2|Bacteria,4NNJE@976|Bacteroidetes,2FMVH@200643|Bacteroidia,22XG7@171551|Porphyromonadaceae 976|Bacteroidetes T Cyclic nucleotide-binding domain protein - - - - - - - - - - - - cNMP_binding PHJFGMMN_01645 411477.PARMER_03927 2.35e-268 734.0 COG2334@1|root,COG2334@2|Bacteria,4NH00@976|Bacteroidetes,2FKYD@200643|Bacteroidia,22XFX@171551|Porphyromonadaceae 976|Bacteroidetes S Phosphotransferase enzyme family mdsC - - - - - - - - - - - APH PHJFGMMN_01646 411477.PARMER_03926 4.78e-55 171.0 COG0254@1|root,COG0254@2|Bacteria,4NS7P@976|Bacteroidetes,2FTUG@200643|Bacteroidia,22YDW@171551|Porphyromonadaceae 976|Bacteroidetes J 50S ribosomal protein L31 type B rpmE2 - - ko:K02909 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L31 PHJFGMMN_01647 411477.PARMER_03925 1.41e-241 663.0 COG0191@1|root,COG0191@2|Bacteria,4NF5C@976|Bacteroidetes,2FMMR@200643|Bacteroidia,22WHF@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate fba - 4.1.2.13 ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003,M00165,M00167,M00344,M00345 R01068,R01070,R01829,R02568 RC00438,RC00439,RC00603,RC00604 ko00000,ko00001,ko00002,ko01000 - - - F_bP_aldolase PHJFGMMN_01648 411477.PARMER_03924 3.18e-141 399.0 2DVBG@1|root,32UZ2@2|Bacteria,4NSV1@976|Bacteroidetes,2FPAK@200643|Bacteroidia,22YFN@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4923) - - - - - - - - - - - - DUF4923 PHJFGMMN_01649 411477.PARMER_03922 0.0 1390.0 COG0210@1|root,COG0507@1|root,COG0210@2|Bacteria,COG0507@2|Bacteria,4NF6J@976|Bacteroidetes,2FM19@200643|Bacteroidia,22X68@171551|Porphyromonadaceae 976|Bacteroidetes L COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member uvrD2 - - - - - - - - - - - HRDC,HTH_40,Herpes_Helicase,PIF1,UvrD_C_2 PHJFGMMN_01650 411477.PARMER_03920 0.0 984.0 COG0490@1|root,COG2985@1|root,COG0490@2|Bacteria,COG2985@2|Bacteria,4NEBW@976|Bacteroidetes,2FMDF@200643|Bacteroidia,22XD6@171551|Porphyromonadaceae 976|Bacteroidetes P Predicted Permease Membrane Region - - - ko:K07085 - - - - ko00000 2.A.81 - - Asp-Al_Ex,TrkA_C PHJFGMMN_01651 411477.PARMER_03921 6.97e-216 595.0 COG0101@1|root,COG0101@2|Bacteria,4NFDC@976|Bacteroidetes,2FP2H@200643|Bacteroidia,22WF1@171551|Porphyromonadaceae 976|Bacteroidetes J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs truA GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 ko:K06173 - - - - ko00000,ko01000,ko03016 - - - PseudoU_synth_1 PHJFGMMN_01652 411477.PARMER_03919 2.96e-210 581.0 COG0697@1|root,COG0697@2|Bacteria,4NHQX@976|Bacteroidetes,2FM74@200643|Bacteroidia,22VZY@171551|Porphyromonadaceae 976|Bacteroidetes EG EamA-like transporter family - - - ko:K08978 - - - - ko00000,ko02000 2.A.7.2 - - EamA PHJFGMMN_01653 411477.PARMER_03918 1.46e-148 418.0 2C9DF@1|root,333A7@2|Bacteria,4NSB0@976|Bacteroidetes,2FMUV@200643|Bacteroidia,22YFC@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3256) - - - - - - - - - - - - DUF3256 PHJFGMMN_01655 411477.PARMER_03916 1.02e-108 314.0 COG1595@1|root,COG1595@2|Bacteria,4NS8T@976|Bacteroidetes,2FRUY@200643|Bacteroidia,22YCS@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_01656 411477.PARMER_03915 6.59e-124 353.0 COG1413@1|root,COG1413@2|Bacteria,4NXQU@976|Bacteroidetes,2FTDB@200643|Bacteroidia,22Z03@171551|Porphyromonadaceae 976|Bacteroidetes C lyase activity - - - - - - - - - - - - - PHJFGMMN_01657 411477.PARMER_03914 1.34e-103 300.0 2CFJZ@1|root,32SKC@2|Bacteria,4NTV9@976|Bacteroidetes,2G38N@200643|Bacteroidia,22YGH@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01658 411477.PARMER_03913 1.01e-224 618.0 28NPZ@1|root,2ZBPQ@2|Bacteria,4NN3K@976|Bacteroidetes,2FPEH@200643|Bacteroidia,22Y6X@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - OMP_b-brl_2 PHJFGMMN_01660 411477.PARMER_03910 0.0 1000.0 COG0138@1|root,COG0138@2|Bacteria,4NEZD@976|Bacteroidetes,2FN3G@200643|Bacteroidia,22WKZ@171551|Porphyromonadaceae 976|Bacteroidetes F Bifunctional purine biosynthesis protein PurH purH - 2.1.2.3,3.5.4.10 ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 M00048 R01127,R04560 RC00026,RC00263,RC00456 ko00000,ko00001,ko00002,ko01000,ko04147 - - - AICARFT_IMPCHas,MGS PHJFGMMN_01661 411477.PARMER_03909 1.92e-238 656.0 COG1077@1|root,COG1077@2|Bacteria,4NETQ@976|Bacteroidetes,2FM2I@200643|Bacteroidia,22W6A@171551|Porphyromonadaceae 976|Bacteroidetes D Rod shape-determining protein MreB mreB - - ko:K03569 - - - - ko00000,ko02048,ko03036,ko04812 1.A.33.1,9.B.157.1 - - MreB_Mbl PHJFGMMN_01662 411477.PARMER_03908 1.57e-198 550.0 COG1792@1|root,COG1792@2|Bacteria,4NF14@976|Bacteroidetes,2FMWS@200643|Bacteroidia,22WND@171551|Porphyromonadaceae 976|Bacteroidetes M shape-determining protein MreC mreC - - ko:K03570 - - - - ko00000,ko03036 9.B.157.1 - - MreC PHJFGMMN_01663 411477.PARMER_03907 7.78e-114 327.0 2AFDM@1|root,315DF@2|Bacteria,4NQ5K@976|Bacteroidetes,2FPJA@200643|Bacteroidia,22YUU@171551|Porphyromonadaceae 976|Bacteroidetes S rod shape-determining protein MreD mreD - - - - - - - - - - - - PHJFGMMN_01664 411477.PARMER_03906 0.0 1270.0 COG0768@1|root,COG0768@2|Bacteria,4NE47@976|Bacteroidetes,2FM4X@200643|Bacteroidia,22WGF@171551|Porphyromonadaceae 976|Bacteroidetes M Penicillin-binding Protein mrdA - 3.4.16.4 ko:K05515 ko00550,ko01501,map00550,map01501 - - - ko00000,ko00001,ko01000,ko01011 - - - PBP_dimer,Transpeptidase PHJFGMMN_01665 999419.HMPREF1077_01108 0.0 885.0 COG0772@1|root,COG0772@2|Bacteria,4NDZD@976|Bacteroidetes,2FNA1@200643|Bacteroidia,22W55@171551|Porphyromonadaceae 976|Bacteroidetes D Belongs to the SEDS family rodA - - ko:K05837 - - - - ko00000,ko03036 - - - FTSW_RODA_SPOVE PHJFGMMN_01666 411477.PARMER_03904 8.59e-98 283.0 2ADSH@1|root,313I2@2|Bacteria,4NQMU@976|Bacteroidetes,2FUJF@200643|Bacteroidia,22YQC@171551|Porphyromonadaceae 976|Bacteroidetes S GldH lipoprotein gldH GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0017144,GO:0040011,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071976,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - - - - - - - - - - GldH_lipo PHJFGMMN_01667 411477.PARMER_03903 4.12e-283 780.0 COG1774@1|root,COG1774@2|Bacteria,4NENX@976|Bacteroidetes,2FNYP@200643|Bacteroidia,22WXP@171551|Porphyromonadaceae 976|Bacteroidetes S PSP1 C-terminal domain protein yaaT - - - - - - - - - - - PSP1 PHJFGMMN_01668 411477.PARMER_03902 1.25e-285 780.0 COG0156@1|root,COG0156@2|Bacteria,4NFBU@976|Bacteroidetes,2FM0N@200643|Bacteroidia,22W8W@171551|Porphyromonadaceae 976|Bacteroidetes E 2-amino-3-ketobutyrate CoA ligase bioF - 2.3.1.29,2.3.1.47 ko:K00639,ko:K00652 ko00260,ko00780,ko01100,map00260,map00780,map01100 M00123,M00573,M00577 R00371,R03210,R10124 RC00004,RC00039,RC00394,RC02725 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2 PHJFGMMN_01669 411477.PARMER_03901 1.02e-234 645.0 COG1597@1|root,COG1597@2|Bacteria,4NJWB@976|Bacteroidetes,2FMGJ@200643|Bacteroidia,22WEB@171551|Porphyromonadaceae 976|Bacteroidetes I Lipid kinase - - - - - - - - - - - - DAGK_cat PHJFGMMN_01670 411477.PARMER_03900 4.65e-168 469.0 COG4123@1|root,COG4123@2|Bacteria,4NG1X@976|Bacteroidetes,2FMHH@200643|Bacteroidia,22Y0T@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) smtA GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016430,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.223 ko:K15460 - - - - ko00000,ko01000,ko03016 - - - MTS PHJFGMMN_01671 411477.PARMER_03899 0.0 1578.0 COG0466@1|root,COG0466@2|Bacteria,4NE1G@976|Bacteroidetes,2FNKR@200643|Bacteroidia,22X0E@171551|Porphyromonadaceae 976|Bacteroidetes O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner lon - 3.4.21.53 ko:K01338 ko04112,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - AAA,LON_substr_bdg,Lon_C PHJFGMMN_01672 411477.PARMER_03898 5.85e-139 392.0 COG3039@1|root,COG3039@2|Bacteria,4NGW9@976|Bacteroidetes,2FQ99@200643|Bacteroidia,22WBT@171551|Porphyromonadaceae 976|Bacteroidetes L PFAM Transposase domain (DUF772) - - - - - - - - - - - - DDE_Tnp_1_2,DUF772 PHJFGMMN_01673 411477.PARMER_03897 2.5e-47 151.0 COG3039@1|root,COG3039@2|Bacteria,4NGW9@976|Bacteroidetes,2FQ99@200643|Bacteroidia,22WBT@171551|Porphyromonadaceae 976|Bacteroidetes L PFAM Transposase domain (DUF772) - - - - - - - - - - - - DDE_Tnp_1_2,DUF772 PHJFGMMN_01675 411477.PARMER_03894 5.78e-97 282.0 2DEYG@1|root,2ZPSM@2|Bacteria,4NNJW@976|Bacteroidetes,2FTAK@200643|Bacteroidia,22Y3E@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG14473 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_01676 411477.PARMER_03893 8.75e-145 408.0 COG0237@1|root,COG0237@2|Bacteria,4NQKS@976|Bacteroidetes,2FSP8@200643|Bacteroidia,22Y5U@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A coaE GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 ko:K00859 ko00770,ko01100,map00770,map01100 M00120 R00130 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - CoaE PHJFGMMN_01677 411477.PARMER_03892 3.04e-234 645.0 COG4856@1|root,COG4856@2|Bacteria,4NHJQ@976|Bacteroidetes,2FM3I@200643|Bacteroidia,22Y6Y@171551|Porphyromonadaceae 976|Bacteroidetes S YbbR-like protein - - - - - - - - - - - - YbbR PHJFGMMN_01678 411477.PARMER_03891 7.72e-38 129.0 COG1862@1|root,COG1862@2|Bacteria,4NUT4@976|Bacteroidetes,2FTXK@200643|Bacteroidia,22YDB@171551|Porphyromonadaceae 976|Bacteroidetes U Preprotein translocase subunit YajC yajC - - ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 - - YajC PHJFGMMN_01679 411477.PARMER_03890 1.32e-218 603.0 COG0781@1|root,COG0781@2|Bacteria,4NDVR@976|Bacteroidetes,2FMU4@200643|Bacteroidia,22WGB@171551|Porphyromonadaceae 976|Bacteroidetes K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons nusB - - ko:K03625 - - - - ko00000,ko03009,ko03021 - - - NusB PHJFGMMN_01680 411477.PARMER_03889 2.17e-81 241.0 2ASD9@1|root,31HSR@2|Bacteria,4NQ71@976|Bacteroidetes,2FS2B@200643|Bacteroidia,22YPC@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3276) - - - - - - - - - - - - DUF3276 PHJFGMMN_01681 411477.PARMER_03888 1.81e-22 87.4 COG2768@1|root,COG2768@2|Bacteria,4NUN8@976|Bacteroidetes,2FUIC@200643|Bacteroidia,22YQ1@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S binding domain - - - - - - - - - - - - Fer4 PHJFGMMN_01682 999419.HMPREF1077_01136 2.23e-178 496.0 2C52N@1|root,2Z7U1@2|Bacteria,4NEZW@976|Bacteroidetes,2FNRZ@200643|Bacteroidia,22XME@171551|Porphyromonadaceae 976|Bacteroidetes S PorT protein porT - - - - - - - - - - - OMP_b-brl_2 PHJFGMMN_01683 411477.PARMER_03886 9.12e-199 550.0 COG4589@1|root,COG4589@2|Bacteria,4NIPM@976|Bacteroidetes,2FMKC@200643|Bacteroidia,22XR3@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the CDS family cdsA - 2.7.7.41 ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 M00093 R01799 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_1 PHJFGMMN_01684 411477.PARMER_03885 0.0 1280.0 COG0465@1|root,COG0465@2|Bacteria,4NF0E@976|Bacteroidetes,2FNEA@200643|Bacteroidia,22X35@171551|Porphyromonadaceae 976|Bacteroidetes O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins ftsH - - ko:K03798 - M00742 - - ko00000,ko00002,ko01000,ko01002,ko03110 - - - AAA,FtsH_ext,Peptidase_M41 PHJFGMMN_01685 411477.PARMER_03884 2.58e-82 243.0 COG0799@1|root,COG0799@2|Bacteria,4NSKK@976|Bacteroidetes,2FSG4@200643|Bacteroidia,22YHP@171551|Porphyromonadaceae 976|Bacteroidetes J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation rsfS - - ko:K09710 - - - - ko00000,ko03009 - - - RsfS PHJFGMMN_01688 411477.PARMER_03881 3.25e-308 841.0 COG1668@1|root,COG1668@2|Bacteria,4NFSZ@976|Bacteroidetes,2FMUF@200643|Bacteroidia,22WPZ@171551|Porphyromonadaceae 976|Bacteroidetes CP ABC transporter permease natB - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 PHJFGMMN_01689 411477.PARMER_03880 7.33e-221 609.0 COG4152@1|root,COG4152@2|Bacteria,4NEJE@976|Bacteroidetes,2FMK3@200643|Bacteroidia,22WQV@171551|Porphyromonadaceae 976|Bacteroidetes S ABC transporter, ATP-binding protein natA - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran,DUF4162 PHJFGMMN_01690 411477.PARMER_03879 0.0 1328.0 COG0358@1|root,COG0358@2|Bacteria,4NENT@976|Bacteroidetes,2FMV1@200643|Bacteroidia,22WQI@171551|Porphyromonadaceae 976|Bacteroidetes L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication dnaG - - ko:K02316 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB_bind,Toprim_2,Toprim_4,Toprim_N,zf-CHC2 PHJFGMMN_01691 411477.PARMER_03878 0.0 1054.0 COG0265@1|root,COG0457@1|root,COG0265@2|Bacteria,COG0457@2|Bacteria,4NJVP@976|Bacteroidetes,2FMV8@200643|Bacteroidia,22XQ1@171551|Porphyromonadaceae 976|Bacteroidetes O Tetratricopeptide repeat protein - - - - - - - - - - - - TPR_11,TPR_16,TPR_8,Trypsin_2 PHJFGMMN_01693 411477.PARMER_03876 1.16e-88 260.0 COG4974@1|root,COG4974@2|Bacteria,4P0XP@976|Bacteroidetes,2FM1E@200643|Bacteroidia 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_01694 411477.PARMER_03874 2.53e-240 660.0 2C4R5@1|root,2Z7JK@2|Bacteria,4NHGV@976|Bacteroidetes,2FMRU@200643|Bacteroidia,22VUI@171551|Porphyromonadaceae 976|Bacteroidetes S GGGtGRT protein - - - - - - - - - - - - GGGtGRT PHJFGMMN_01695 411477.PARMER_03873 3.2e-37 125.0 2C3XY@1|root,2ZF4X@2|Bacteria,4P7U7@976|Bacteroidetes,2FZ9B@200643|Bacteroidia,2319Y@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01696 411477.PARMER_03872 5.91e-167 466.0 COG0822@1|root,COG0822@2|Bacteria,4NJ26@976|Bacteroidetes,2FNEH@200643|Bacteroidia,22XK3@171551|Porphyromonadaceae 976|Bacteroidetes C COG0822 NifU homolog involved in Fe-S cluster formation - - - - - - - - - - - - NifU_N PHJFGMMN_01697 411477.PARMER_03871 4.07e-268 734.0 COG0526@1|root,COG0526@2|Bacteria,4NEX3@976|Bacteroidetes,2FN8N@200643|Bacteroidia,22XR2@171551|Porphyromonadaceae 976|Bacteroidetes CO PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - - - - - - - - - - AhpC-TSA,DUF4369,Thioredoxin_8 PHJFGMMN_01698 411477.PARMER_03869 0.0 2615.0 COG0642@1|root,COG0745@1|root,COG2207@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG2207@2|Bacteria,COG3292@2|Bacteria,4NG0B@976|Bacteroidetes,2FM88@200643|Bacteroidia,22ZRV@171551|Porphyromonadaceae 976|Bacteroidetes T Y_Y_Y domain - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y PHJFGMMN_01699 411477.PARMER_03867 0.0 2008.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FW53@200643|Bacteroidia,231P0@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_01700 411477.PARMER_03866 0.0 1255.0 COG3637@1|root,COG3637@2|Bacteria,4NE4Y@976|Bacteroidetes,2G0HK@200643|Bacteroidia,2324C@171551|Porphyromonadaceae 976|Bacteroidetes M SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_01701 999419.HMPREF1077_03692 3.09e-258 708.0 COG3291@1|root,COG3537@1|root,COG3291@2|Bacteria,COG3537@2|Bacteria,4NKCP@976|Bacteroidetes,2FRRE@200643|Bacteroidia,22WW5@171551|Porphyromonadaceae 976|Bacteroidetes G Peptidase of plants and bacteria - - - - - - - - - - - - BSP PHJFGMMN_01702 411477.PARMER_03862 0.0 1613.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMQ9@200643|Bacteroidia,22W3K@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 PHJFGMMN_01703 411477.PARMER_03861 0.0 1580.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMXD@200643|Bacteroidia,22WP0@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 PHJFGMMN_01704 411477.PARMER_03860 0.0 1617.0 COG3537@1|root,COG3537@2|Bacteria,4NKNG@976|Bacteroidetes,2FQE6@200643|Bacteroidia,22XJZ@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 PHJFGMMN_01705 411477.PARMER_03859 4.48e-280 765.0 COG1479@1|root,COG1479@2|Bacteria,4NRVQ@976|Bacteroidetes,2FTAB@200643|Bacteroidia,22YPV@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function DUF262 - - - - - - - - - - - - DUF262 PHJFGMMN_01706 411477.PARMER_03858 1.73e-246 676.0 COG4938@1|root,COG4938@2|Bacteria,4NMVA@976|Bacteroidetes,2FUI5@200643|Bacteroidia,230WK@171551|Porphyromonadaceae 976|Bacteroidetes S AAA ATPase domain - - - - - - - - - - - - AAA_15,AAA_21,DUF3696 PHJFGMMN_01707 411477.PARMER_03857 6.91e-175 487.0 2E8IY@1|root,332WW@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - PHJFGMMN_01708 411477.PARMER_03856 0.0 1090.0 COG0205@1|root,COG0205@2|Bacteria,4NIKT@976|Bacteroidetes,2FNYX@200643|Bacteroidia,22X32@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions pfp - 2.7.1.11,2.7.1.90 ko:K00895,ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 - R00756,R00764,R02073,R03236,R04779 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PFK PHJFGMMN_01709 411477.PARMER_03855 2.98e-80 237.0 COG2314@1|root,COG2314@2|Bacteria,4NTTC@976|Bacteroidetes,2FVGZ@200643|Bacteroidia 976|Bacteroidetes S TM2 domain protein - - - - - - - - - - - - TM2 PHJFGMMN_01710 411477.PARMER_03854 3.61e-144 406.0 COG0307@1|root,COG0307@2|Bacteria,4NHI8@976|Bacteroidetes,2FNEF@200643|Bacteroidia,22W5P@171551|Porphyromonadaceae 976|Bacteroidetes H riboflavin synthase subunit alpha ribE - 2.5.1.9 ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00066 RC00958,RC00960 ko00000,ko00001,ko00002,ko01000 - - - Lum_binding PHJFGMMN_01711 411477.PARMER_03853 8.68e-129 365.0 COG0778@1|root,COG0778@2|Bacteria,4NPZV@976|Bacteroidetes,2FNIP@200643|Bacteroidia,22XS9@171551|Porphyromonadaceae 976|Bacteroidetes C nitroreductase - - - - - - - - - - - - Nitroreductase PHJFGMMN_01712 411477.PARMER_03852 2.03e-315 860.0 COG0534@1|root,COG0534@2|Bacteria,4NDUF@976|Bacteroidetes,2G334@200643|Bacteroidia,22XIB@171551|Porphyromonadaceae 976|Bacteroidetes V Polysaccharide biosynthesis C-terminal domain - - - - - - - - - - - - MatE PHJFGMMN_01713 999419.HMPREF1077_03678 2.68e-309 845.0 COG1295@1|root,COG1295@2|Bacteria,4NH0H@976|Bacteroidetes,2FP7P@200643|Bacteroidia,22WV5@171551|Porphyromonadaceae 976|Bacteroidetes S ribonuclease BN yihY - - ko:K07058 - - - - ko00000 - - - Virul_fac_BrkB PHJFGMMN_01715 411477.PARMER_04265 0.0 1003.0 COG0265@1|root,COG0265@2|Bacteria,4NFCS@976|Bacteroidetes,2FMUA@200643|Bacteroidia,22W8K@171551|Porphyromonadaceae 976|Bacteroidetes O deoxyribonuclease HsdR degQ - - - - - - - - - - - PDZ_2,Trypsin_2 PHJFGMMN_01716 1122931.AUAE01000014_gene2043 3.25e-192 535.0 COG0568@1|root,COG0568@2|Bacteria,4NEBF@976|Bacteroidetes,2FNVQ@200643|Bacteroidia,22XDM@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released rpoD - - ko:K03086 - - - - ko00000,ko03021 - - - Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4 PHJFGMMN_01719 616991.JPOO01000003_gene1097 1.01e-34 122.0 2EBGV@1|root,335HF@2|Bacteria,4NV5E@976|Bacteroidetes,1I6Q2@117743|Flavobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01720 411477.PARMER_01060 9.91e-204 563.0 COG2996@1|root,COG2996@2|Bacteria,4NGS6@976|Bacteroidetes,2FP01@200643|Bacteroidia,22WQB@171551|Porphyromonadaceae 976|Bacteroidetes S S1 domain yitL - - ko:K00243 - - - - ko00000 - - - S1_2 PHJFGMMN_01721 411477.PARMER_01059 5.74e-175 489.0 COG1596@1|root,COG1596@2|Bacteria,4NNJT@976|Bacteroidetes,2FYG9@200643|Bacteroidia,231T2@171551|Porphyromonadaceae 976|Bacteroidetes M Polysaccharide biosynthesis/export protein - - - ko:K01991 ko02026,map02026 - - - ko00000,ko00001,ko02000 1.B.18 - - Poly_export,SLBB PHJFGMMN_01722 411477.PARMER_01058 0.0 1014.0 COG3206@1|root,COG3206@2|Bacteria,4NEXU@976|Bacteroidetes,2FM9K@200643|Bacteroidia,22XVK@171551|Porphyromonadaceae 976|Bacteroidetes M Chain length determinant protein - - - - - - - - - - - - AAA_31,CbiA,GNVR,Wzz PHJFGMMN_01723 411477.PARMER_01057 0.0 1198.0 COG0079@1|root,COG1213@1|root,COG0079@2|Bacteria,COG1213@2|Bacteria,4NPC4@976|Bacteroidetes,2FPHU@200643|Bacteroidia,22Z5Z@171551|Porphyromonadaceae 976|Bacteroidetes M Nucleotidyl transferase - - - - - - - - - - - - Aminotran_1_2,NTP_transf_3,NTP_transferase PHJFGMMN_01724 411477.PARMER_01056 7.94e-228 627.0 COG2423@1|root,COG2423@2|Bacteria,4PJ6G@976|Bacteroidetes,2FR7I@200643|Bacteroidia,23165@171551|Porphyromonadaceae 976|Bacteroidetes E Ornithine cyclodeaminase/mu-crystallin family - - 4.3.1.12 ko:K01750 ko00330,ko01110,ko01130,ko01230,map00330,map01110,map01130,map01230 - R00671 RC00354 ko00000,ko00001,ko01000 - - - OCD_Mu_crystall PHJFGMMN_01725 411477.PARMER_01055 5.22e-260 716.0 COG2244@1|root,COG2244@2|Bacteria,4NFF1@976|Bacteroidetes,2G1FD@200643|Bacteroidia,22ZSX@171551|Porphyromonadaceae 976|Bacteroidetes S Polysaccharide biosynthesis protein - - - ko:K03328 - - - - ko00000 2.A.66.2 - - Polysacc_synt PHJFGMMN_01726 411477.PARMER_01054 3.59e-198 548.0 COG3475@1|root,COG3475@2|Bacteria,4NI9P@976|Bacteroidetes,2FR7F@200643|Bacteroidia,22Y5C@171551|Porphyromonadaceae 976|Bacteroidetes M LicD family licD - - ko:K07271 - - - - ko00000,ko01000 - - - LicD PHJFGMMN_01727 411477.PARMER_01053 1.15e-282 772.0 COG0381@1|root,COG0381@2|Bacteria,4NGBD@976|Bacteroidetes,2FM5D@200643|Bacteroidia,22W64@171551|Porphyromonadaceae 976|Bacteroidetes G UDP-N-acetylglucosamine 2-epimerase epsC - 5.1.3.14 ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 M00362 R00420 RC00290 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Epimerase_2 PHJFGMMN_01728 411477.PARMER_01052 9.19e-287 783.0 COG0438@1|root,COG0438@2|Bacteria,4NZMT@976|Bacteroidetes,2FU1B@200643|Bacteroidia,22ZD1@171551|Porphyromonadaceae 976|Bacteroidetes M transferase activity, transferring glycosyl groups - - - - - - - - - - - - Glycos_transf_1 PHJFGMMN_01729 411477.PARMER_01051 2.48e-157 444.0 28KD3@1|root,2Z9ZT@2|Bacteria,4NS3Y@976|Bacteroidetes,2FV4D@200643|Bacteroidia,22YQX@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01730 411477.PARMER_00713 5.02e-84 247.0 COG2963@1|root,COG2963@2|Bacteria,4P67R@976|Bacteroidetes,2FSQH@200643|Bacteroidia,231AJ@171551|Porphyromonadaceae 976|Bacteroidetes L transposase activity - - - ko:K07497 - - - - ko00000 - - - - PHJFGMMN_01731 411477.PARMER_00664 3.62e-88 258.0 COG3436@1|root,COG3436@2|Bacteria,4NV0F@976|Bacteroidetes,2FSTJ@200643|Bacteroidia,230PF@171551|Porphyromonadaceae 976|Bacteroidetes L PFAM IS66 Orf2 like protein - - - ko:K07484 - - - - ko00000 - - - TnpB_IS66 PHJFGMMN_01732 411477.PARMER_02876 0.0 1025.0 COG4974@1|root,COG4974@2|Bacteria,4NEK2@976|Bacteroidetes,2FMJC@200643|Bacteroidia,22YQB@171551|Porphyromonadaceae 976|Bacteroidetes L COG3436 Transposase and inactivated derivatives - - - - - - - - - - - - DDE_Tnp_IS66,DDE_Tnp_IS66_C,LZ_Tnp_IS66 PHJFGMMN_01733 411477.PARMER_01148 1.28e-296 809.0 COG3328@1|root,COG3328@2|Bacteria,4NFQS@976|Bacteroidetes,2FM5A@200643|Bacteroidia,22YJ0@171551|Porphyromonadaceae 976|Bacteroidetes L COG COG3328 Transposase and inactivated derivatives - - - - - - - - - - - - Transposase_mut PHJFGMMN_01735 411477.PARMER_01051 4.64e-14 72.4 28KD3@1|root,2Z9ZT@2|Bacteria,4NS3Y@976|Bacteroidetes,2FV4D@200643|Bacteroidia,22YQX@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01736 411477.PARMER_02880 5.34e-269 735.0 COG0438@1|root,COG0438@2|Bacteria,4NGFN@976|Bacteroidetes,2FQAC@200643|Bacteroidia,22WKS@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase - - - - - - - - - - - - DUF1972,Glyco_transf_4,Glycos_transf_1 PHJFGMMN_01737 411477.PARMER_02881 1.46e-302 824.0 COG0438@1|root,COG0438@2|Bacteria,4NIP2@976|Bacteroidetes,2FQ2U@200643|Bacteroidia,22X1C@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase Family 4 - - - - - - - - - - - - Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1 PHJFGMMN_01738 411477.PARMER_02882 2.43e-283 775.0 COG3307@1|root,COG3307@2|Bacteria,4NPAM@976|Bacteroidetes,2FNIA@200643|Bacteroidia,22YVC@171551|Porphyromonadaceae 976|Bacteroidetes M -O-antigen - - - - - - - - - - - - - PHJFGMMN_01739 411477.PARMER_02883 0.0 881.0 COG1409@1|root,COG1409@2|Bacteria,4P9ZN@976|Bacteroidetes,2FVV2@200643|Bacteroidia 976|Bacteroidetes S Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos PHJFGMMN_01740 411477.PARMER_02885 1.48e-128 365.0 COG1971@1|root,COG1971@2|Bacteria,4NSE0@976|Bacteroidetes,2FNXB@200643|Bacteroidia,22Y6I@171551|Porphyromonadaceae 976|Bacteroidetes P Probably functions as a manganese efflux pump mntP - - - - - - - - - - - Mntp PHJFGMMN_01741 411477.PARMER_02886 1.7e-127 362.0 COG0778@1|root,COG0778@2|Bacteria,4NKRC@976|Bacteroidetes,2FSSA@200643|Bacteroidia,231HX@171551|Porphyromonadaceae 976|Bacteroidetes C Putative TM nitroreductase - - - - - - - - - - - - Nitroreductase,TM1586_NiRdase PHJFGMMN_01742 411477.PARMER_02887 1.06e-233 642.0 COG1215@1|root,COG1215@2|Bacteria,4PKF3@976|Bacteroidetes,2G3EY@200643|Bacteroidia,23223@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase like family 2 - - - - - - - - - - - - Glycos_transf_2 PHJFGMMN_01743 411477.PARMER_02888 8.38e-120 342.0 2C3H9@1|root,32ZPJ@2|Bacteria,4NW3R@976|Bacteroidetes,2FQZX@200643|Bacteroidia,22YTJ@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF4199) - - - - - - - - - - - - DUF4199 PHJFGMMN_01745 411477.PARMER_02891 0.0 952.0 COG0034@1|root,COG0034@2|Bacteria,4NFSM@976|Bacteroidetes,2FMIC@200643|Bacteroidia,22WKI@171551|Porphyromonadaceae 976|Bacteroidetes F Glutamine phosphoribosylpyrophosphate amidotransferase purF - 2.4.2.14 ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048 R01072 RC00010,RC02724,RC02752 ko00000,ko00001,ko00002,ko01000,ko01002 - - - GATase_6,GATase_7,Pribosyltran PHJFGMMN_01746 411477.PARMER_02892 0.0 875.0 COG2195@1|root,COG2195@2|Bacteria,4NE7N@976|Bacteroidetes,2FMBF@200643|Bacteroidia,22WC7@171551|Porphyromonadaceae 976|Bacteroidetes E Cleaves the N-terminal amino acid of tripeptides pepT - 3.4.11.4 ko:K01258 - - - - ko00000,ko01000,ko01002 - - - M20_dimer,Peptidase_M20 PHJFGMMN_01747 411477.PARMER_02893 2.65e-272 743.0 COG0404@1|root,COG0404@2|Bacteria,4NF7S@976|Bacteroidetes,2FPDM@200643|Bacteroidia,22X2U@171551|Porphyromonadaceae 976|Bacteroidetes E The glycine cleavage system catalyzes the degradation of glycine gcvT - 2.1.2.10 ko:K00605 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 M00532 R01221,R02300,R04125 RC00022,RC00069,RC00183,RC02834 ko00000,ko00001,ko00002,ko01000 - - - GCV_T,GCV_T_C PHJFGMMN_01748 411477.PARMER_02894 1.09e-221 612.0 COG0385@1|root,COG0385@2|Bacteria,4NFWK@976|Bacteroidetes,2FM0C@200643|Bacteroidia,22XY0@171551|Porphyromonadaceae 976|Bacteroidetes S Sodium bile acid symporter family - - - ko:K03453 - - - - ko00000 2.A.28 - - SBF PHJFGMMN_01749 411477.PARMER_02897 4.96e-118 337.0 COG1247@1|root,COG1247@2|Bacteria,4NPIE@976|Bacteroidetes,2FSNY@200643|Bacteroidia,22Y03@171551|Porphyromonadaceae 976|Bacteroidetes M Acetyltransferase (GNAT) domain yncA - 2.3.1.183 ko:K03823 ko00440,ko01130,map00440,map01130 - R08871,R08938 RC00004,RC00064 ko00000,ko00001,ko01000 - - - Acetyltransf_4 PHJFGMMN_01750 411477.PARMER_02898 4.43e-100 290.0 2BZ8H@1|root,32R4H@2|Bacteria,4NRUQ@976|Bacteroidetes,2FTBX@200643|Bacteroidia,22Y57@171551|Porphyromonadaceae 976|Bacteroidetes S Family of unknown function (DUF695) - - - - - - - - - - - - DUF695 PHJFGMMN_01751 411477.PARMER_02899 2.47e-275 751.0 2DB9J@1|root,2Z7X1@2|Bacteria,4NGUY@976|Bacteroidetes,2FQG2@200643|Bacteroidia,22XBK@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF5109) - - - - - - - - - - - - DUF4434,DUF5109 PHJFGMMN_01752 411477.PARMER_02900 0.0 877.0 COG0498@1|root,COG0498@2|Bacteria,4NEAA@976|Bacteroidetes,2FMPH@200643|Bacteroidia,22VYQ@171551|Porphyromonadaceae 976|Bacteroidetes E Threonine synthase N terminus thrC - 4.2.3.1 ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018 R01466,R05086 RC00017,RC00526 ko00000,ko00001,ko00002,ko01000 - - - PALP,Thr_synth_N PHJFGMMN_01753 411477.PARMER_02901 2.79e-296 807.0 COG3635@1|root,COG3635@2|Bacteria,4NH0F@976|Bacteroidetes,2FMC7@200643|Bacteroidia,22W6J@171551|Porphyromonadaceae 976|Bacteroidetes G 2,3-bisphosphoglycerate-independent phosphoglycerate mutase - - 5.4.2.12 ko:K15635 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000 - - - Metalloenzyme,PhosphMutase PHJFGMMN_01754 411477.PARMER_02902 0.0 1561.0 COG0460@1|root,COG0527@1|root,COG0460@2|Bacteria,COG0527@2|Bacteria,4NFGR@976|Bacteroidetes,2FMDB@200643|Bacteroidia,22VVG@171551|Porphyromonadaceae 976|Bacteroidetes E homoserine dehydrogenase thrA - 1.1.1.3,2.7.2.4 ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00017,M00018,M00526,M00527 R00480,R01773,R01775 RC00002,RC00043,RC00087 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase,ACT,ACT_7,Homoserine_dh,NAD_binding_3 PHJFGMMN_01755 411477.PARMER_02904 0.0 2086.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FX80@200643|Bacteroidia,23245@171551|Porphyromonadaceae 976|Bacteroidetes H TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_01756 411477.PARMER_02905 0.0 1027.0 COG3193@1|root,COG3193@2|Bacteria,4P0RZ@976|Bacteroidetes,2G0AC@200643|Bacteroidia,23246@171551|Porphyromonadaceae 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_01757 411477.PARMER_02906 1.92e-210 582.0 COG0697@1|root,COG0697@2|Bacteria,4NGZ3@976|Bacteroidetes,2FSB0@200643|Bacteroidia,231HJ@171551|Porphyromonadaceae 976|Bacteroidetes EG EamA-like transporter family - - - - - - - - - - - - EamA PHJFGMMN_01758 411477.PARMER_02907 0.0 1341.0 COG3855@1|root,COG3855@2|Bacteria,4NGBV@976|Bacteroidetes,2FPT1@200643|Bacteroidia,22X6J@171551|Porphyromonadaceae 976|Bacteroidetes G catalyzes the formation of fructose 6-phosphate from fructose-1,6-bisphosphate fbp - 3.1.3.11 ko:K04041 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200 M00003,M00165,M00167 R00762,R04780 RC00017 ko00000,ko00001,ko00002,ko01000 - - - FBPase_2 PHJFGMMN_01759 411477.PARMER_02908 0.0 874.0 COG0534@1|root,COG0534@2|Bacteria,4NEBB@976|Bacteroidetes,2FN29@200643|Bacteroidia,22X54@171551|Porphyromonadaceae 976|Bacteroidetes V Mate efflux family protein norM - - ko:K03327 - - - - ko00000,ko02000 2.A.66.1 - - MatE PHJFGMMN_01760 411477.PARMER_02909 1.49e-176 492.0 COG0652@1|root,COG0652@2|Bacteria,4NGT6@976|Bacteroidetes,2FMZ6@200643|Bacteroidia,22XHA@171551|Porphyromonadaceae 976|Bacteroidetes O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides ppiA - 5.2.1.8 ko:K03768 - - - - ko00000,ko01000,ko03110 - - - Pro_isomerase PHJFGMMN_01761 411477.PARMER_02910 4.15e-160 448.0 COG0652@1|root,COG0652@2|Bacteria,4NMKP@976|Bacteroidetes,2G31W@200643|Bacteroidia,22XR7@171551|Porphyromonadaceae 976|Bacteroidetes M PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides ppiA - 5.2.1.8 ko:K01802,ko:K03768 - - - - ko00000,ko01000,ko03110 - - - Pro_isomerase PHJFGMMN_01762 411477.PARMER_02911 0.0 867.0 COG2911@1|root,COG2911@2|Bacteria,4NHAF@976|Bacteroidetes,2FMVP@200643|Bacteroidia,22WVX@171551|Porphyromonadaceae 976|Bacteroidetes S Porin subfamily - - - - - - - - - - - - Porin_2 PHJFGMMN_01763 411477.PARMER_02913 2.9e-224 617.0 COG1208@1|root,COG1208@2|Bacteria,4PKJR@976|Bacteroidetes,2G07F@200643|Bacteroidia,23247@171551|Porphyromonadaceae 976|Bacteroidetes JM COG NOG09722 non supervised orthologous group - - - - - - - - - - - - NTP_transferase PHJFGMMN_01764 411477.PARMER_02914 0.0 1069.0 COG3534@1|root,COG3534@2|Bacteria,4NECK@976|Bacteroidetes,2FNNB@200643|Bacteroidia,22WR1@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha-L-arabinofuranosidase C-terminus abf2 - 3.2.1.55 ko:K01209 ko00520,map00520 - R01762 - ko00000,ko00001,ko01000 - GH51 - Alpha-L-AF_C PHJFGMMN_01765 411477.PARMER_02915 0.0 1370.0 COG3590@1|root,COG3590@2|Bacteria,4NEYB@976|Bacteroidetes,2FP7Y@200643|Bacteroidia,22WXJ@171551|Porphyromonadaceae 976|Bacteroidetes O Peptidase family M13 pepO - 3.4.24.71 ko:K01415,ko:K07386 - - - - ko00000,ko01000,ko01002,ko04147 - - - Peptidase_M13,Peptidase_M13_N PHJFGMMN_01766 411477.PARMER_02916 2.62e-183 508.0 28P39@1|root,2ZACW@2|Bacteria,4NKCN@976|Bacteroidetes,2G2KY@200643|Bacteroidia,22XTI@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF5020) - - - - - - - - - - - - DUF5020 PHJFGMMN_01767 411477.PARMER_02917 2.95e-284 780.0 COG2252@1|root,COG2252@2|Bacteria,4NGCG@976|Bacteroidetes,2FNYM@200643|Bacteroidia,22WKC@171551|Porphyromonadaceae 976|Bacteroidetes S Permease yieG - - ko:K06901 - - - - ko00000,ko02000 2.A.1.40 - - Xan_ur_permease PHJFGMMN_01768 411477.PARMER_02918 3.03e-206 572.0 COG0530@1|root,COG0530@2|Bacteria,4NFBC@976|Bacteroidetes,2FNX9@200643|Bacteroidia,22XHF@171551|Porphyromonadaceae 976|Bacteroidetes P Sodium/calcium exchanger protein - - - ko:K07301 - - - - ko00000,ko02000 2.A.19.5 - - Na_Ca_ex PHJFGMMN_01772 411477.PARMER_02922 9.71e-216 596.0 COG1575@1|root,COG1575@2|Bacteria,4NGCJ@976|Bacteroidetes,2FMMX@200643|Bacteroidia,22XUQ@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the MenA family. Type 1 subfamily menA - 2.5.1.74 ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R05617,R06858,R10757 RC02935,RC02936,RC03264 ko00000,ko00001,ko00002,ko01000,ko01006 - - - UbiA PHJFGMMN_01773 411477.PARMER_02924 5.01e-205 569.0 COG0697@1|root,COG0697@2|Bacteria,4NK8U@976|Bacteroidetes,2FNMF@200643|Bacteroidia,22X8B@171551|Porphyromonadaceae 976|Bacteroidetes EG Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - EamA PHJFGMMN_01774 411477.PARMER_02925 3.01e-120 344.0 COG0693@1|root,COG0693@2|Bacteria,4NPUE@976|Bacteroidetes,2FMXF@200643|Bacteroidia,22Y7F@171551|Porphyromonadaceae 976|Bacteroidetes S biosynthesis protein ThiJ thiJ - 3.5.1.124 ko:K03152 - - - - ko00000,ko01000,ko01002 - - - DJ-1_PfpI PHJFGMMN_01775 411477.PARMER_02926 6.26e-143 410.0 COG0810@1|root,COG0810@2|Bacteria,4NG4I@976|Bacteroidetes,2FM9A@200643|Bacteroidia 976|Bacteroidetes M TonB family domain protein - - - - - - - - - - - - TonB_C PHJFGMMN_01776 411477.PARMER_02927 1.71e-86 255.0 COG0848@1|root,COG0848@2|Bacteria,4NNI6@976|Bacteroidetes,2FRY4@200643|Bacteroidia,22Y92@171551|Porphyromonadaceae 976|Bacteroidetes U Biopolymer transporter ExbD - - - ko:K03559 - - - - ko00000,ko02000 1.A.30.2.1 - - ExbD PHJFGMMN_01777 411477.PARMER_02928 2.28e-158 445.0 COG0811@1|root,COG0811@2|Bacteria,4NFIX@976|Bacteroidetes,2FNG0@200643|Bacteroidia,22WUN@171551|Porphyromonadaceae 976|Bacteroidetes U Transporter, MotA TolQ ExbB proton channel family protein exbB - - ko:K03561 - - - - ko00000,ko02000 1.A.30.2.1 - - MotA_ExbB PHJFGMMN_01778 411477.PARMER_02929 1.02e-171 479.0 COG0854@1|root,COG0854@2|Bacteria,4NF4Z@976|Bacteroidetes,2FM21@200643|Bacteroidia,22WZG@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate pdxJ GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 ko:K03474 ko00750,ko01100,map00750,map01100 M00124 R05838 RC01476 ko00000,ko00001,ko00002,ko01000 - - - PdxJ PHJFGMMN_01779 411477.PARMER_02930 3.84e-153 430.0 COG0517@1|root,COG0517@2|Bacteria,4NF8G@976|Bacteroidetes,2FT2B@200643|Bacteroidia,22YSH@171551|Porphyromonadaceae 976|Bacteroidetes S CBS domain - - - - - - - - - - - - CBS PHJFGMMN_01780 411477.PARMER_02931 1.03e-207 574.0 COG0061@1|root,COG0061@2|Bacteria,4NFG5@976|Bacteroidetes,2FMTM@200643|Bacteroidia,22W2Y@171551|Porphyromonadaceae 976|Bacteroidetes H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP nadK - 2.7.1.23 ko:K00858 ko00760,ko01100,map00760,map01100 - R00104 RC00002,RC00078 ko00000,ko00001,ko01000 - - - NAD_kinase PHJFGMMN_01781 999419.HMPREF1077_03718 1.85e-109 329.0 COG0642@1|root,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FNIT@200643|Bacteroidia,22WZF@171551|Porphyromonadaceae 976|Bacteroidetes T PAS domain - - - - - - - - - - - - HATPase_c,HisKA,PAS_3,PAS_9 PHJFGMMN_01784 411477.PARMER_02934 5.94e-118 337.0 2F53I@1|root,33XQR@2|Bacteria,4P34J@976|Bacteroidetes,2FTPR@200643|Bacteroidia 976|Bacteroidetes S PLAT/LH2 and C2-like Ca2+-binding lipoprotein - - - - - - - - - - - - PLCC PHJFGMMN_01785 435591.BDI_3893 8.18e-86 257.0 2F0WP@1|root,33TYA@2|Bacteria,4P2HP@976|Bacteroidetes,2FS84@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01786 411477.PARMER_02937 1.45e-115 332.0 COG3637@1|root,COG3637@2|Bacteria,4NXWX@976|Bacteroidetes,2FRFV@200643|Bacteroidia,22YTA@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl PHJFGMMN_01787 411477.PARMER_02938 2.23e-129 367.0 COG1716@1|root,COG1716@2|Bacteria,4NQCI@976|Bacteroidetes,2FM2E@200643|Bacteroidia,22Y5Q@171551|Porphyromonadaceae 976|Bacteroidetes T FHA domain protein - - - - - - - - - - - - FHA PHJFGMMN_01788 411477.PARMER_02939 2.73e-283 775.0 COG2271@1|root,COG2271@2|Bacteria,4PKVW@976|Bacteroidetes,2FKZD@200643|Bacteroidia,22WE6@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator Superfamily fsr - - ko:K08223 - - - - ko00000,ko02000 2.A.1.35 - - MFS_1 PHJFGMMN_01789 411477.PARMER_02940 0.0 914.0 COG1538@1|root,COG1538@2|Bacteria,4NG42@976|Bacteroidetes,2FMZB@200643|Bacteroidia,22VXK@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP PHJFGMMN_01790 411477.PARMER_02941 2.28e-226 625.0 COG0845@1|root,COG0845@2|Bacteria,4NI28@976|Bacteroidetes,2G38K@200643|Bacteroidia,22XD4@171551|Porphyromonadaceae 976|Bacteroidetes M Biotin-lipoyl like - - - ko:K01993 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 PHJFGMMN_01791 411477.PARMER_02942 5.04e-278 761.0 COG0842@1|root,COG0842@2|Bacteria,4NJWT@976|Bacteroidetes,2FP7Q@200643|Bacteroidia,22WB7@171551|Porphyromonadaceae 976|Bacteroidetes V ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 PHJFGMMN_01792 411477.PARMER_02943 2.15e-282 773.0 COG0842@1|root,COG0842@2|Bacteria,4NJWT@976|Bacteroidetes,2FP7Q@200643|Bacteroidia,22WS8@171551|Porphyromonadaceae 976|Bacteroidetes V ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 PHJFGMMN_01794 411477.PARMER_02944 1.07e-186 520.0 COG2801@1|root,COG2801@2|Bacteria,4NKGS@976|Bacteroidetes,2FRAQ@200643|Bacteroidia,22YVN@171551|Porphyromonadaceae 976|Bacteroidetes L PFAM Integrase core domain - - - - - - - - - - - - rve,rve_3 PHJFGMMN_01796 411477.PARMER_02946 0.0 1458.0 COG3591@1|root,COG3591@2|Bacteria,4NEAK@976|Bacteroidetes,2FMI1@200643|Bacteroidia,22X40@171551|Porphyromonadaceae 976|Bacteroidetes E peptidase S46 dpp11 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009986,GO:0009987,GO:0016049,GO:0016787,GO:0019538,GO:0030154,GO:0032502,GO:0033218,GO:0034641,GO:0040007,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048869,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - - - - - - - - - - Peptidase_S46 PHJFGMMN_01797 411477.PARMER_02947 5.04e-114 326.0 COG2954@1|root,COG2954@2|Bacteria,4NNGE@976|Bacteroidetes,2FNH1@200643|Bacteroidia,22XW0@171551|Porphyromonadaceae 976|Bacteroidetes S Adenylate cyclase cyaA - 4.6.1.1 ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 - - - CYTH PHJFGMMN_01798 411477.PARMER_02948 4.65e-256 702.0 COG1193@1|root,COG1193@2|Bacteria,4NNNV@976|Bacteroidetes,2FMM1@200643|Bacteroidia,22VWU@171551|Porphyromonadaceae 976|Bacteroidetes L Domain of unknown function (DUF2027) - - - - - - - - - - - - DUF2027,Smr PHJFGMMN_01799 411477.PARMER_02950 4.32e-122 348.0 COG3153@1|root,COG3153@2|Bacteria,4NP1G@976|Bacteroidetes,2FNXX@200643|Bacteroidia,22YGC@171551|Porphyromonadaceae 976|Bacteroidetes S Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_1,Acetyltransf_9,Zn_ribbon_2 PHJFGMMN_01800 411477.PARMER_02951 3.61e-298 813.0 COG0809@1|root,COG0809@2|Bacteria,4NDZ5@976|Bacteroidetes,2FNJD@200643|Bacteroidia,22X1R@171551|Porphyromonadaceae 976|Bacteroidetes H Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) queA - 2.4.99.17 ko:K07568 - - - - ko00000,ko01000,ko03016 - - - Queuosine_synth PHJFGMMN_01801 411477.PARMER_02952 0.0 1326.0 COG0457@1|root,COG0823@1|root,COG2885@1|root,COG0457@2|Bacteria,COG0823@2|Bacteria,COG2885@2|Bacteria,4NE6G@976|Bacteroidetes,2FPQX@200643|Bacteroidia,22WF4@171551|Porphyromonadaceae 976|Bacteroidetes MU Belongs to the ompA family - - - ko:K03640 - - - - ko00000,ko02000 2.C.1.2 - - CarboxypepD_reg,OmpA,PD40 PHJFGMMN_01802 411477.PARMER_02953 2.58e-224 617.0 COG0526@1|root,COG0526@2|Bacteria,4NKU0@976|Bacteroidetes,2FPZT@200643|Bacteroidia,22XPB@171551|Porphyromonadaceae 976|Bacteroidetes CO Domain of unknown function (DUF5106) - - - - - - - - - - - - AhpC-TSA,DUF5106,Thioredoxin_8 PHJFGMMN_01803 411477.PARMER_02954 4.65e-173 484.0 COG0501@1|root,COG0501@2|Bacteria,4NHYD@976|Bacteroidetes,2FPZ9@200643|Bacteroidia,22WAG@171551|Porphyromonadaceae 976|Bacteroidetes O Peptidase family M48 loiP - - ko:K07387 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M48 PHJFGMMN_01804 411477.PARMER_02955 3.99e-141 399.0 COG1259@1|root,COG1259@2|Bacteria,4NGSW@976|Bacteroidetes,2FTKZ@200643|Bacteroidia,22XUY@171551|Porphyromonadaceae 976|Bacteroidetes S Bifunctional nuclease - - - ko:K08999 - - - - ko00000 - - - DNase-RNase,UVR PHJFGMMN_01805 411477.PARMER_02956 3.92e-305 833.0 COG1972@1|root,COG1972@2|Bacteria,4NEYN@976|Bacteroidetes,2FNQH@200643|Bacteroidia,22W9V@171551|Porphyromonadaceae 976|Bacteroidetes F Na+ dependent nucleoside transporter C-terminus nupC - - ko:K03317 - - - - ko00000 2.A.41 - - Gate,Nucleos_tra2_C,Nucleos_tra2_N PHJFGMMN_01806 411477.PARMER_02957 8.74e-170 473.0 COG1385@1|root,COG1385@2|Bacteria,4NE2S@976|Bacteroidetes,2FKZG@200643|Bacteroidia,22WYD@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit rsmE - 2.1.1.193 ko:K09761 - - - - ko00000,ko01000,ko03009 - - - Methyltrans_RNA PHJFGMMN_01807 411477.PARMER_02958 2.65e-121 347.0 COG0110@1|root,COG0110@2|Bacteria,4NNWE@976|Bacteroidetes,2G32A@200643|Bacteroidia,231ZM@171551|Porphyromonadaceae 976|Bacteroidetes S Maltose acetyltransferase maa - 2.3.1.79 ko:K00661 - - - - ko00000,ko01000 - - - Hexapep,Hexapep_2,Mac PHJFGMMN_01808 411477.PARMER_02959 0.0 866.0 COG0519@1|root,COG0519@2|Bacteria,4NZSX@976|Bacteroidetes,2FNJE@200643|Bacteroidia,22ZKW@171551|Porphyromonadaceae 976|Bacteroidetes F GMP synthase C terminal domain - GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 - - - GATase,GMP_synt_C,NAD_synthase PHJFGMMN_01809 411477.PARMER_02960 0.0 1022.0 COG0518@1|root,COG0519@1|root,COG0518@2|Bacteria,COG0519@2|Bacteria,4NESX@976|Bacteroidetes,2FM3V@200643|Bacteroidia,22VWG@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the synthesis of GMP from XMP guaA - 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 - - - GATase,GMP_synt_C,NAD_synthase PHJFGMMN_01810 411477.PARMER_02961 2.36e-181 508.0 COG4372@1|root,COG4372@2|Bacteria,4PKE4@976|Bacteroidetes,2FPKQ@200643|Bacteroidia,22W9H@171551|Porphyromonadaceae 976|Bacteroidetes S Transposase - - - - - - - - - - - - - PHJFGMMN_01811 411477.PARMER_02962 1.21e-143 405.0 COG0664@1|root,COG0664@2|Bacteria,4NHXN@976|Bacteroidetes,2FYUZ@200643|Bacteroidia,230W6@171551|Porphyromonadaceae 976|Bacteroidetes T Cyclic nucleotide-monophosphate binding domain - - - - - - - - - - - - cNMP_binding PHJFGMMN_01812 411477.PARMER_02963 0.0 904.0 COG1538@1|root,COG1538@2|Bacteria,4NF4V@976|Bacteroidetes,2FM0S@200643|Bacteroidia,22WY2@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP PHJFGMMN_01813 411477.PARMER_02964 2.19e-226 625.0 COG0845@1|root,COG0845@2|Bacteria,4NECC@976|Bacteroidetes,2FMDD@200643|Bacteroidia,22WYE@171551|Porphyromonadaceae 976|Bacteroidetes M Hemolysin secretion protein D - - - ko:K01993 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 PHJFGMMN_01814 999419.HMPREF1077_01163 3.03e-264 726.0 COG1668@1|root,COG1668@2|Bacteria,4NG99@976|Bacteroidetes,2FNNT@200643|Bacteroidia,22WTF@171551|Porphyromonadaceae 976|Bacteroidetes CP membrane - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 PHJFGMMN_01815 411477.PARMER_02967 1.33e-292 799.0 COG0842@1|root,COG0842@2|Bacteria,4NGZG@976|Bacteroidetes,2FMX5@200643|Bacteroidia,22W5N@171551|Porphyromonadaceae 976|Bacteroidetes V ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 PHJFGMMN_01816 411477.PARMER_02968 1.37e-218 602.0 COG1082@1|root,COG1082@2|Bacteria,4NJ3Z@976|Bacteroidetes,2FNWR@200643|Bacteroidia,22XN3@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2 PHJFGMMN_01817 411477.PARMER_02969 2.4e-173 483.0 COG0637@1|root,COG0637@2|Bacteria,4NJS1@976|Bacteroidetes,2FN13@200643|Bacteroidia,22W0C@171551|Porphyromonadaceae 976|Bacteroidetes S HAD hydrolase, family IA, variant 3 yfbT - - - - - - - - - - - HAD_2 PHJFGMMN_01818 411477.PARMER_02970 0.0 898.0 COG0166@1|root,COG0166@2|Bacteria,4NDV0@976|Bacteroidetes,2FP20@200643|Bacteroidia,22VVH@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the GPI family pgi - 5.3.1.9 ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 M00001,M00004,M00114 R02739,R02740,R03321 RC00376,RC00563 ko00000,ko00001,ko00002,ko01000,ko04147 - - - PGI PHJFGMMN_01819 411477.PARMER_02971 1.12e-242 666.0 COG0240@1|root,COG0240@2|Bacteria,4NF4R@976|Bacteroidetes,2FND2@200643|Bacteroidia,22WB0@171551|Porphyromonadaceae 976|Bacteroidetes I Glycerol-3-phosphate dehydrogenase gpsA - 1.1.1.94 ko:K00057 ko00564,ko01110,map00564,map01110 - R00842,R00844 RC00029 ko00000,ko00001,ko01000 - - - NAD_Gly3P_dh_C,NAD_Gly3P_dh_N PHJFGMMN_01820 411477.PARMER_02972 0.0 1147.0 COG1190@1|root,COG1190@2|Bacteria,4NDZN@976|Bacteroidetes,2FMXC@200643|Bacteroidia,22WSH@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the class-II aminoacyl-tRNA synthetase family lysS - 6.1.1.6 ko:K04567 ko00970,map00970 M00359,M00360 R03658 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DUF4332,tRNA-synt_2,tRNA_anti-codon PHJFGMMN_01821 411477.PARMER_02973 8.86e-151 423.0 COG1057@1|root,COG1057@2|Bacteria,4NFQI@976|Bacteroidetes,2FTAA@200643|Bacteroidia,22XY3@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) nadD - 2.7.7.18 ko:K00969 ko00760,ko01100,map00760,map01100 M00115 R00137,R03005 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_like PHJFGMMN_01823 411477.PARMER_02975 3.92e-129 367.0 COG0194@1|root,COG0194@2|Bacteria,4NEDG@976|Bacteroidetes,2FNWA@200643|Bacteroidia,22XMY@171551|Porphyromonadaceae 976|Bacteroidetes F Essential for recycling GMP and indirectly, cGMP gmk GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 ko:K00942 ko00230,ko01100,map00230,map01100 M00050 R00332,R02090 RC00002 ko00000,ko00001,ko00002,ko01000 - - - Guanylate_kin PHJFGMMN_01824 411477.PARMER_02976 1.29e-183 513.0 COG1561@1|root,COG1561@2|Bacteria,4NEU4@976|Bacteroidetes,2FPBF@200643|Bacteroidia,22WDC@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF1732) - - - - - - - - - - - - DUF1732,YicC_N PHJFGMMN_01825 411477.PARMER_02978 6.3e-153 431.0 COG1214@1|root,COG1214@2|Bacteria,4NDUR@976|Bacteroidetes,2FPYK@200643|Bacteroidia,22WRV@171551|Porphyromonadaceae 976|Bacteroidetes O Universal bacterial protein YeaZ yeaZ - - ko:K14742 - - - - ko00000,ko03016 - - - Peptidase_M22 PHJFGMMN_01826 411477.PARMER_02980 4.14e-90 263.0 COG0776@1|root,COG0776@2|Bacteria,4NVZW@976|Bacteroidetes,2FSFM@200643|Bacteroidia 976|Bacteroidetes L COG NOG35286 non supervised orthologous group - - - - - - - - - - - - Bac_DNA_binding PHJFGMMN_01827 411477.PARMER_02981 0.0 1370.0 COG5545@1|root,COG5545@2|Bacteria,4NG2W@976|Bacteroidetes,2FNU1@200643|Bacteroidia,2300D@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG26639 non supervised orthologous group - - - - - - - - - - - - DUF3874,VirE,VirE_N PHJFGMMN_01828 411477.PARMER_02983 2.7e-277 759.0 COG1883@1|root,COG1883@2|Bacteria,4NH3V@976|Bacteroidetes,2FMSY@200643|Bacteroidia,22WID@171551|Porphyromonadaceae 976|Bacteroidetes C Glutaconyl-CoA decarboxylase subunit beta oadB - 4.1.1.3 ko:K01572 ko00620,ko01100,map00620,map01100 - R00217 RC00040 ko00000,ko00001,ko01000,ko02000 3.B.1.1.1 - - OAD_beta PHJFGMMN_01829 411477.PARMER_02984 1.61e-92 271.0 COG4770@1|root,COG4770@2|Bacteria,4NSWV@976|Bacteroidetes,2FRYI@200643|Bacteroidia,22YBV@171551|Porphyromonadaceae 976|Bacteroidetes I Biofilm PGA synthesis protein PgaD mmdC - - - - - - - - - - - Biotin_lipoyl PHJFGMMN_01830 411477.PARMER_02985 8.45e-209 577.0 COG3630@1|root,COG3630@2|Bacteria,4NIHN@976|Bacteroidetes,2FMSV@200643|Bacteroidia,22W1S@171551|Porphyromonadaceae 976|Bacteroidetes C Oxaloacetate decarboxylase, gamma chain - - - - - - - - - - - - LTD,OAD_gamma PHJFGMMN_01831 411477.PARMER_02986 0.0 1018.0 COG4799@1|root,COG4799@2|Bacteria,4NEMJ@976|Bacteroidetes,2FM4G@200643|Bacteroidia,22WJA@171551|Porphyromonadaceae 976|Bacteroidetes I Carboxyl transferase domain - - - - - - - - - - - - Carboxyl_trans PHJFGMMN_01832 411477.PARMER_02987 1.53e-93 273.0 COG0346@1|root,COG0346@2|Bacteria,4NNGG@976|Bacteroidetes,2FRZS@200643|Bacteroidia,22XX8@171551|Porphyromonadaceae 976|Bacteroidetes E methylmalonyl-CoA epimerase mce - 5.1.99.1 ko:K05606 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00373,M00375,M00376,M00741 R02765,R09979 RC00780,RC02739 ko00000,ko00001,ko00002,ko01000 - - - Glyoxalase_4 PHJFGMMN_01833 411477.PARMER_02988 0.0 1599.0 COG1629@1|root,COG4771@2|Bacteria,4PKKT@976|Bacteroidetes,2FR2R@200643|Bacteroidia,2323C@171551|Porphyromonadaceae 976|Bacteroidetes P CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug PHJFGMMN_01834 411477.PARMER_02989 3.05e-234 643.0 COG1897@1|root,COG1897@2|Bacteria,4NEUV@976|Bacteroidetes,2FPRH@200643|Bacteroidia,22WQ6@171551|Porphyromonadaceae 976|Bacteroidetes E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine metAA GO:0003674,GO:0003824,GO:0008374,GO:0008899,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016750 2.3.1.46 ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 M00017 R01777 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 - - - HTS PHJFGMMN_01835 411477.PARMER_02990 0.0 1211.0 COG0826@1|root,COG0826@2|Bacteria,4NEX7@976|Bacteroidetes,2FNE7@200643|Bacteroidia,22W2C@171551|Porphyromonadaceae 976|Bacteroidetes O Collagenase prtQ - - ko:K08303 ko05120,map05120 - - - ko00000,ko00001,ko01000,ko01002 - - - DUF3656,Peptidase_U32 PHJFGMMN_01836 411477.PARMER_02993 9.82e-111 318.0 COG0662@1|root,COG0662@2|Bacteria,4NQUX@976|Bacteroidetes,2FTRK@200643|Bacteroidia,22YJ5@171551|Porphyromonadaceae 976|Bacteroidetes G Cupin 2, conserved barrel domain protein - - - - - - - - - - - - - PHJFGMMN_01837 411477.PARMER_02994 0.0 1732.0 COG0745@1|root,COG1879@1|root,COG2207@1|root,COG5002@1|root,COG0745@2|Bacteria,COG1879@2|Bacteria,COG2207@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,2FWSR@200643|Bacteroidia,22Z9K@171551|Porphyromonadaceae 976|Bacteroidetes T Periplasmic binding proteins and sugar binding domain of LacI family - - - - - - - - - - - - HATPase_c,HTH_18,HTH_AraC,HisKA,Peripla_BP_4,Reg_prop,Response_reg,Y_Y_Y PHJFGMMN_01838 411477.PARMER_02995 8.51e-210 579.0 COG0524@1|root,COG0524@2|Bacteria,4NGFK@976|Bacteroidetes,2FN72@200643|Bacteroidia,22WT2@171551|Porphyromonadaceae 976|Bacteroidetes G pfkB family - - 2.7.1.4 ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 - R00760,R00867,R03920 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PfkB PHJFGMMN_01839 999419.HMPREF1077_01126 2.39e-30 107.0 2DT1D@1|root,33I8Q@2|Bacteria,4NZ02@976|Bacteroidetes,2FVES@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01840 411477.PARMER_02997 0.0 1310.0 COG0457@1|root,COG0457@2|Bacteria,4NFFS@976|Bacteroidetes,2FMYG@200643|Bacteroidia,22X3M@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeats - - - - - - - - - - - - TPR_12,TPR_16,TPR_19,TPR_6,TPR_7,TPR_8 PHJFGMMN_01841 411477.PARMER_02998 0.0 1178.0 COG0481@1|root,COG0481@2|Bacteria,4NEJ9@976|Bacteroidetes,2FM9V@200643|Bacteroidia,22WXD@171551|Porphyromonadaceae 976|Bacteroidetes M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner lepA - - ko:K03596 ko05134,map05134 - - - ko00000,ko00001 - - - EFG_C,GTP_EFTU,GTP_EFTU_D2,LepA_C PHJFGMMN_01842 411477.PARMER_02999 2.28e-108 312.0 COG3087@1|root,COG3087@2|Bacteria,4NU0A@976|Bacteroidetes,2FPJ1@200643|Bacteroidia,22YJR@171551|Porphyromonadaceae 976|Bacteroidetes D cell division - - - - - - - - - - - - SPOR PHJFGMMN_01843 411477.PARMER_03000 0.0 1430.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NHS5@976|Bacteroidetes,2FN1K@200643|Bacteroidia,22WZR@171551|Porphyromonadaceae 976|Bacteroidetes EU peptidase pop - - - - - - - - - - - PD40,Peptidase_S9 PHJFGMMN_01844 411477.PARMER_03001 3.42e-259 709.0 COG1830@1|root,COG1830@2|Bacteria,4NEUM@976|Bacteroidetes,2FKZ7@200643|Bacteroidia,22WU7@171551|Porphyromonadaceae 976|Bacteroidetes G DeoC/LacD family aldolase fbaB - 4.1.2.13 ko:K11645 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003 R01068,R01070,R01829,R02568 RC00438,RC00439,RC00603,RC00604 ko00000,ko00001,ko00002,ko01000 - - - DeoC PHJFGMMN_01845 411477.PARMER_03002 1.01e-137 388.0 COG1592@1|root,COG1592@2|Bacteria,4NJ7V@976|Bacteroidetes,2FP1G@200643|Bacteroidia,22X1G@171551|Porphyromonadaceae 976|Bacteroidetes C Rubrerythrin rbr3A - - - - - - - - - - - Rubrerythrin PHJFGMMN_01847 411477.PARMER_03004 8.17e-286 780.0 COG2265@1|root,COG2265@2|Bacteria,4PKBS@976|Bacteroidetes,2G3EC@200643|Bacteroidia,231MW@171551|Porphyromonadaceae 976|Bacteroidetes J (SAM)-dependent - - - - - - - - - - - - Cons_hypoth95,Methyltransf_15 PHJFGMMN_01848 411477.PARMER_03005 0.0 1052.0 COG0569@1|root,COG2985@1|root,COG0569@2|Bacteria,COG2985@2|Bacteria,4NEBW@976|Bacteroidetes,2FMDF@200643|Bacteroidia,22W10@171551|Porphyromonadaceae 976|Bacteroidetes P TrkA C-terminal domain protein - - - ko:K07085 - - - - ko00000 2.A.81 - - Asp-Al_Ex,TrkA_C PHJFGMMN_01849 411477.PARMER_03006 6.23e-307 835.0 COG0420@1|root,COG0420@2|Bacteria,4NEET@976|Bacteroidetes,2FN3W@200643|Bacteroidia,22XGK@171551|Porphyromonadaceae 976|Bacteroidetes L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity sbcD - - ko:K03547 - - - - ko00000,ko03400 - - - Metallophos,SbcD_C PHJFGMMN_01850 411477.PARMER_03007 0.0 1783.0 COG0419@1|root,COG0419@2|Bacteria,4NH9H@976|Bacteroidetes,2FPAQ@200643|Bacteroidia,22WKY@171551|Porphyromonadaceae 976|Bacteroidetes L Putative exonuclease SbcCD, C subunit sbcC - - ko:K03546 - - - - ko00000,ko03400 - - - AAA_23,SbcCD_C PHJFGMMN_01851 411477.PARMER_03009 0.0 2251.0 COG1262@1|root,COG1262@2|Bacteria,4NKT6@976|Bacteroidetes,2FR3S@200643|Bacteroidia 976|Bacteroidetes S Sulfatase-modifying factor enzyme 1 - - - - - - - - - - - - FGE-sulfatase,NPCBM PHJFGMMN_01852 999419.HMPREF1077_01184 4.07e-290 791.0 COG4225@1|root,COG4225@2|Bacteria,4NGSJ@976|Bacteroidetes,2FM7R@200643|Bacteroidia,22XG1@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl Hydrolase Family 88 - - - - - - - - - - - - Glyco_hydro_88 PHJFGMMN_01854 411477.PARMER_03012 0.0 1090.0 COG1395@1|root,COG1395@2|Bacteria,4NEA1@976|Bacteroidetes,2FP97@200643|Bacteroidia,22XUH@171551|Porphyromonadaceae 976|Bacteroidetes K SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_01855 411477.PARMER_03013 0.0 2055.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia,2300Y@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_01856 411477.PARMER_03015 0.0 2630.0 COG0745@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,2FRPM@200643|Bacteroidia 976|Bacteroidetes T Response regulator receiver domain protein - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y PHJFGMMN_01857 411477.PARMER_03016 0.0 1436.0 COG3250@1|root,COG3250@2|Bacteria,4NEDF@976|Bacteroidetes,2FMTQ@200643|Bacteroidia,231GS@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 2, TIM barrel domain - - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N PHJFGMMN_01858 411477.PARMER_03017 0.0 1479.0 COG0475@1|root,COG0475@2|Bacteria,4NFPE@976|Bacteroidetes,2FN00@200643|Bacteroidia,22XDI@171551|Porphyromonadaceae 976|Bacteroidetes P Transporter, CPA2 family nhaS3 - - - - - - - - - - - Na_H_Exchanger PHJFGMMN_01859 411477.PARMER_03019 0.0 1410.0 COG0296@1|root,COG0296@2|Bacteria,4NECZ@976|Bacteroidetes,2FMTG@200643|Bacteroidia,22W4H@171551|Porphyromonadaceae 976|Bacteroidetes G 1,4-alpha-glucan branching enzyme glgB - 2.4.1.18 ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R02110 - ko00000,ko00001,ko00002,ko01000,ko04147 - CBM48,GH13 - Alpha-amylase,Alpha-amylase_C,CBM_48 PHJFGMMN_01860 411477.PARMER_03020 3.74e-242 664.0 COG1482@1|root,COG1482@2|Bacteria,4NF9A@976|Bacteroidetes,2FN4I@200643|Bacteroidia,22W94@171551|Porphyromonadaceae 976|Bacteroidetes G mannose-6-phosphate isomerase manA - 5.3.1.8 ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 M00114 R01819 RC00376 ko00000,ko00001,ko00002,ko01000 - - - PMI_typeI PHJFGMMN_01861 411477.PARMER_03021 0.0 1769.0 COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,2FMV4@200643|Bacteroidia,22WDW@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 3 xyl3A_3 - 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - GH3 - Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C,PA14 PHJFGMMN_01864 411477.PARMER_03023 8.38e-162 452.0 COG0336@1|root,COG0336@2|Bacteria,4NF2Q@976|Bacteroidetes,2FPQ5@200643|Bacteroidia,22WX6@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the RNA methyltransferase TrmD family trmD GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 ko:K00554 - - R00597 RC00003,RC00334 ko00000,ko01000,ko03016 - - - tRNA_m1G_MT PHJFGMMN_01867 411477.PARMER_03026 0.0 1621.0 COG0072@1|root,COG0073@1|root,COG0072@2|Bacteria,COG0073@2|Bacteria,4NF5B@976|Bacteroidetes,2FNBF@200643|Bacteroidia,22WG1@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily pheT GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 ko:K01890 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - B3_4,B5,FDX-ACB,tRNA_bind PHJFGMMN_01868 411477.PARMER_03027 3e-167 468.0 COG0217@1|root,COG0217@2|Bacteria,4NE8Y@976|Bacteroidetes,2FN07@200643|Bacteroidia,22WSF@171551|Porphyromonadaceae 976|Bacteroidetes K transcriptional regulatory protein - - - - - - - - - - - - Transcrip_reg PHJFGMMN_01869 411477.PARMER_03029 4.55e-176 491.0 2DQRZ@1|root,338BY@2|Bacteria,4NWXM@976|Bacteroidetes,2G3H8@200643|Bacteroidia,231NQ@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01870 1235803.C825_00149 7.99e-106 321.0 2EXGD@1|root,33QSM@2|Bacteria,4P267@976|Bacteroidetes,2FWSV@200643|Bacteroidia,22Z3X@171551|Porphyromonadaceae 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 PHJFGMMN_01871 411477.PARMER_03031 4.92e-188 522.0 COG3022@1|root,COG3022@2|Bacteria,4NFP2@976|Bacteroidetes,2FNHM@200643|Bacteroidia,22XMG@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the UPF0246 family yaaA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0033194,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:1901700 - ko:K09861 - - - - ko00000 - - - H2O2_YaaD PHJFGMMN_01872 411477.PARMER_03032 7.75e-205 568.0 COG0697@1|root,COG0697@2|Bacteria,4NK8U@976|Bacteroidetes,2FNMF@200643|Bacteroidia,22X8B@171551|Porphyromonadaceae 976|Bacteroidetes EG Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - EamA PHJFGMMN_01873 411477.PARMER_03033 6.93e-140 395.0 COG1629@1|root,COG4771@2|Bacteria,4PKE2@976|Bacteroidetes,2G3DZ@200643|Bacteroidia,22WQS@171551|Porphyromonadaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3 PHJFGMMN_01874 411477.PARMER_03034 1.52e-238 654.0 COG1629@1|root,COG1629@2|Bacteria,4P2AA@976|Bacteroidetes,2FNFC@200643|Bacteroidia,23229@171551|Porphyromonadaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3 PHJFGMMN_01875 411477.PARMER_03035 3.69e-81 240.0 COG1629@1|root,COG1629@2|Bacteria,4P2AA@976|Bacteroidetes,2FNFC@200643|Bacteroidia 976|Bacteroidetes P COG NOG25927 non supervised orthologous group - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3 PHJFGMMN_01876 411477.PARMER_03036 4.77e-100 290.0 COG1846@1|root,COG1846@2|Bacteria,4NSMN@976|Bacteroidetes,2FSI9@200643|Bacteroidia,22YW3@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix multiple antibiotic resistance protein - - - - - - - - - - - - MarR PHJFGMMN_01878 411477.PARMER_03038 3.74e-205 567.0 COG0652@1|root,COG0652@2|Bacteria,4NI3Q@976|Bacteroidetes,2FQYV@200643|Bacteroidia,22XZW@171551|Porphyromonadaceae 976|Bacteroidetes M Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD - - 5.2.1.8 ko:K03768 - - - - ko00000,ko01000,ko03110 - - - Pro_isomerase PHJFGMMN_01879 411477.PARMER_03039 0.0 1070.0 COG0490@1|root,COG2985@1|root,COG0490@2|Bacteria,COG2985@2|Bacteria,4NEBW@976|Bacteroidetes,2FMDF@200643|Bacteroidia,22W10@171551|Porphyromonadaceae 976|Bacteroidetes P TrkA C-terminal domain protein - - - ko:K07085 - - - - ko00000 2.A.81 - - Asp-Al_Ex,TrkA_C PHJFGMMN_01880 411477.PARMER_03040 0.0 3002.0 COG2911@1|root,COG2911@2|Bacteria,4NF7F@976|Bacteroidetes,2FNBJ@200643|Bacteroidia,22VVM@171551|Porphyromonadaceae 976|Bacteroidetes S TamB, inner membrane protein subunit of TAM complex - - - - - - - - - - - - TamB PHJFGMMN_01881 999419.HMPREF1077_01212 1.78e-240 661.0 COG0533@1|root,COG0533@2|Bacteria,4NE8E@976|Bacteroidetes,2FKZ9@200643|Bacteroidia,22WKJ@171551|Porphyromonadaceae 976|Bacteroidetes O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction tsaD - 2.3.1.234 ko:K01409 - - R10648 RC00070,RC00416 ko00000,ko01000,ko03016 - - - Peptidase_M22 PHJFGMMN_01882 411477.PARMER_03042 4.87e-106 306.0 COG1546@1|root,COG1546@2|Bacteria,4NDVV@976|Bacteroidetes,2FMFI@200643|Bacteroidia,22X5C@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the CinA family cinA - 3.5.1.42 ko:K03742,ko:K03743 ko00760,map00760 - R02322 RC00100 ko00000,ko00001,ko01000 - - - CinA,MoCF_biosynth PHJFGMMN_01884 411477.PARMER_03044 5.96e-159 444.0 COG0177@1|root,COG0177@2|Bacteria,4NFF3@976|Bacteroidetes,2FM8U@200643|Bacteroidia,22WI0@171551|Porphyromonadaceae 976|Bacteroidetes L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate nth - 4.2.99.18 ko:K10773 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - EndIII_4Fe-2S,HhH-GPD PHJFGMMN_01885 411477.PARMER_03045 8.7e-83 245.0 COG0239@1|root,COG0239@2|Bacteria,4NV3N@976|Bacteroidetes,2FUP5@200643|Bacteroidia,22YRC@171551|Porphyromonadaceae 976|Bacteroidetes D Important for reducing fluoride concentration in the cell, thus reducing its toxicity crcB - - ko:K06199 - - - - ko00000,ko02000 1.A.43.1,1.A.43.2,1.A.43.3 - - CRCB PHJFGMMN_01886 411477.PARMER_03046 1.67e-248 681.0 COG0016@1|root,COG0016@2|Bacteria,4NF8I@976|Bacteroidetes,2FNZN@200643|Bacteroidia,22W2R@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily pheS GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 ko:K01889 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Phe_tRNA-synt_N,tRNA-synt_2d PHJFGMMN_01887 411477.PARMER_03047 7.5e-53 166.0 COG3137@1|root,COG3137@2|Bacteria,4NGB2@976|Bacteroidetes,2FPFT@200643|Bacteroidia 976|Bacteroidetes M Protein of unknown function (DUF3078) - - - - - - - - - - - - DUF3078 PHJFGMMN_01888 411477.PARMER_03048 2.74e-214 593.0 COG0697@1|root,COG0697@2|Bacteria,4NK8U@976|Bacteroidetes,2FNMF@200643|Bacteroidia,22XPM@171551|Porphyromonadaceae 976|Bacteroidetes EG EamA-like transporter family - - - - - - - - - - - - EamA PHJFGMMN_01890 411477.PARMER_03051 7.28e-90 265.0 COG0864@1|root,COG0864@2|Bacteria,4NTBC@976|Bacteroidetes,2FUBM@200643|Bacteroidia,230BF@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator - - - ko:K07722 - - - - ko00000,ko03000 - - - NikR_C,RHH_1 PHJFGMMN_01891 411477.PARMER_03052 0.0 1264.0 COG4206@1|root,COG4206@2|Bacteria,4NHH8@976|Bacteroidetes,2FM70@200643|Bacteroidia,22W28@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec PHJFGMMN_01892 411477.PARMER_03053 6.33e-189 525.0 COG0413@1|root,COG0413@2|Bacteria,4NDX4@976|Bacteroidetes,2FNNC@200643|Bacteroidia,22WEU@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate panB - 2.1.2.11 ko:K00606 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R01226 RC00022,RC00200 ko00000,ko00001,ko00002,ko01000 - - - Pantoate_transf PHJFGMMN_01893 411477.PARMER_03054 0.0 911.0 COG1797@1|root,COG1797@2|Bacteria,4NF1V@976|Bacteroidetes,2FNW5@200643|Bacteroidia,22W4X@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source cbiA - 6.3.5.11,6.3.5.9 ko:K02224 ko00860,ko01100,ko01120,map00860,map01100,map01120 - R05224,R05815 RC00010,RC01301 ko00000,ko00001,ko01000 - - - AAA_26,CbiA,GATase_3 PHJFGMMN_01894 411477.PARMER_03055 2.67e-131 372.0 COG2096@1|root,COG2096@2|Bacteria,4NIQI@976|Bacteroidetes,2FQ6J@200643|Bacteroidia,22XQF@171551|Porphyromonadaceae 976|Bacteroidetes S ATP cob(I)alamin adenosyltransferase - - - - - - - - - - - - Cob_adeno_trans PHJFGMMN_01895 411477.PARMER_03056 6.22e-72 216.0 COG3549@1|root,COG3549@2|Bacteria,4NTC3@976|Bacteroidetes,2FTVX@200643|Bacteroidia,22YJT@171551|Porphyromonadaceae 976|Bacteroidetes S RelE-like toxin of type II toxin-antitoxin system HigB - - - ko:K07334 - - - - ko00000,ko02048 - - - HigB-like_toxin PHJFGMMN_01896 411477.PARMER_03057 3.51e-74 222.0 COG3093@1|root,COG3093@2|Bacteria,4NUVE@976|Bacteroidetes,2FTUK@200643|Bacteroidia,22YS0@171551|Porphyromonadaceae 976|Bacteroidetes K COG3093 Plasmid maintenance system antidote protein higA - - ko:K21498 - - - - ko00000,ko02048 - - - HTH_3 PHJFGMMN_01897 411477.PARMER_03058 0.0 914.0 COG0624@1|root,COG0624@2|Bacteria,4NFGE@976|Bacteroidetes,2FN9J@200643|Bacteroidia,22WCD@171551|Porphyromonadaceae 976|Bacteroidetes E peptidase dapE - - - - - - - - - - - M20_dimer,Peptidase_M20 PHJFGMMN_01898 411477.PARMER_03059 7.68e-310 845.0 COG0513@1|root,COG0513@2|Bacteria,4NE4Z@976|Bacteroidetes,2FNFU@200643|Bacteroidia,22WHN@171551|Porphyromonadaceae 976|Bacteroidetes L DbpA RNA binding domain dbpA - 3.6.4.13 ko:K05591 - - - - ko00000,ko01000,ko03009 - - - DEAD,DbpA,Helicase_C PHJFGMMN_01899 411477.PARMER_03060 1.6e-307 837.0 COG0402@1|root,COG0402@2|Bacteria,4NHV6@976|Bacteroidetes,2FQSE@200643|Bacteroidia,22XCF@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine mtaD - 3.5.4.28,3.5.4.31 ko:K12960 ko00270,ko01100,map00270,map01100 - R09660 RC00477 ko00000,ko00001,ko01000 - - - Amidohydro_1 PHJFGMMN_01900 411477.PARMER_03061 8.71e-196 543.0 COG0005@1|root,COG0005@2|Bacteria,4NE4J@976|Bacteroidetes,2FM1B@200643|Bacteroidia,22X9V@171551|Porphyromonadaceae 976|Bacteroidetes F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate xapA - 2.4.2.1 ko:K03783 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 - R01561,R01863,R01969,R02147,R02294,R02295,R02297,R02484,R02557,R02748,R08368,R10244 RC00033,RC00063,RC00122 ko00000,ko00001,ko01000 - - - PNP_UDP_1 PHJFGMMN_01901 1123278.KB893570_gene2446 0.000542 43.5 COG1629@1|root,COG2373@1|root,COG1629@2|Bacteria,COG2373@2|Bacteria,4NG2S@976|Bacteroidetes,47XIT@768503|Cytophagia 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - A2M,A2M_N,A2M_comp,A2M_recep,CarbopepD_reg_2,Plug,Thiol-ester_cl PHJFGMMN_01903 411477.PARMER_00686 1.65e-189 528.0 COG1712@1|root,COG1712@2|Bacteria,4NIWN@976|Bacteroidetes,2FP19@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function DUF108 nadX - 1.4.1.21 ko:K06989 ko00760,ko01100,map00760,map01100 - R07407,R07410 RC02566 ko00000,ko00001,ko01000 - - - DUF108,NAD_binding_3 PHJFGMMN_01904 411477.PARMER_00688 1.73e-216 597.0 COG1052@1|root,COG1052@2|Bacteria,4NJGJ@976|Bacteroidetes,2FPFB@200643|Bacteroidia,22XF1@171551|Porphyromonadaceae 976|Bacteroidetes CH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - - - - - - - - - - 2-Hacid_dh,2-Hacid_dh_C PHJFGMMN_01905 411477.PARMER_00689 1.07e-191 531.0 COG2755@1|root,COG2755@2|Bacteria,4NMUB@976|Bacteroidetes,2FQW2@200643|Bacteroidia,22ZWG@171551|Porphyromonadaceae 976|Bacteroidetes E GDSL-like Lipase/Acylhydrolase - - - - - - - - - - - - Lipase_GDSL_2 PHJFGMMN_01909 411477.PARMER_00693 0.0 1085.0 COG0531@1|root,COG0531@2|Bacteria,4NDU2@976|Bacteroidetes,2FPUV@200643|Bacteroidia,22WHW@171551|Porphyromonadaceae 976|Bacteroidetes E C-terminus of AA_permease - - - ko:K03294 - - - - ko00000 2.A.3.2 - - AA_permease,AA_permease_2 PHJFGMMN_01910 411477.PARMER_00694 3.97e-172 480.0 COG0300@1|root,COG0300@2|Bacteria,4NK81@976|Bacteroidetes,2G2FB@200643|Bacteroidia,231IM@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase, short chain dehydrogenase reductase family - - - - - - - - - - - - adh_short PHJFGMMN_01911 411477.PARMER_00695 0.0 1629.0 COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes,2FM1K@200643|Bacteroidia,22WB8@171551|Porphyromonadaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug PHJFGMMN_01912 411477.PARMER_00697 2.29e-119 342.0 COG1595@1|root,COG1595@2|Bacteria,4NVAJ@976|Bacteroidetes,2FP8X@200643|Bacteroidia,22YDG@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_01913 411477.PARMER_00699 4.47e-230 634.0 COG3712@1|root,COG3712@2|Bacteria,4NRWD@976|Bacteroidetes,2FP4Y@200643|Bacteroidia,2304C@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_01914 411477.PARMER_00700 0.0 902.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_01915 1501391.LG35_10165 4.22e-285 780.0 COG4974@1|root,COG4974@2|Bacteria,4NX3Q@976|Bacteroidetes,2G3F8@200643|Bacteroidia 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_01916 435591.BDI_2139 4.56e-60 187.0 COG3943@1|root,COG3943@2|Bacteria,4NQ20@976|Bacteroidetes,2FS6A@200643|Bacteroidia 976|Bacteroidetes S COG3943, virulence protein - - - - - - - - - - - - - PHJFGMMN_01917 1235813.JCM10003_1435 2.56e-290 793.0 COG3378@1|root,COG3378@2|Bacteria,4NE1A@976|Bacteroidetes,2FPTD@200643|Bacteroidia,4AMD3@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_01918 679935.Alfi_1477 3.73e-17 74.3 2F64X@1|root,33YP3@2|Bacteria,4P4JH@976|Bacteroidetes,2FUE9@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01919 435591.BDI_2141 2.94e-188 528.0 COG0358@1|root,COG0358@2|Bacteria,4NH5X@976|Bacteroidetes,2FPHT@200643|Bacteroidia 976|Bacteroidetes L Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - Toprim_2,zf-CHC2 PHJFGMMN_01920 679935.Alfi_0404 9.54e-190 542.0 COG1193@1|root,COG1193@2|Bacteria,4NDU7@976|Bacteroidetes,2FNV4@200643|Bacteroidia 976|Bacteroidetes L plasmid recombination enzyme - - - - - - - - - - - - Mob_Pre PHJFGMMN_01921 138119.DSY1410 7.41e-188 534.0 COG0477@1|root,COG0477@2|Bacteria,1UHRM@1239|Firmicutes,24AEF@186801|Clostridia,267AA@186807|Peptococcaceae 186801|Clostridia EGP Major Facilitator - - - ko:K08217 - - - - br01600,ko00000,ko01504,ko02000 2.A.1.21.1,2.A.1.21.22 - - MFS_1,MFS_3 PHJFGMMN_01922 411477.PARMER_00700 0.0 1335.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_01923 411477.PARMER_00701 0.0 1145.0 COG1435@1|root,COG1435@2|Bacteria,4NFWU@976|Bacteroidetes,2FN5G@200643|Bacteroidia 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_01924 411477.PARMER_00702 0.0 929.0 COG0644@1|root,COG0644@2|Bacteria,4NJ0Z@976|Bacteroidetes,2FMSG@200643|Bacteroidia,22XHB@171551|Porphyromonadaceae 976|Bacteroidetes C FAD dependent oxidoreductase - - - - - - - - - - - - FAD_oxidored PHJFGMMN_01925 411477.PARMER_00703 0.0 1315.0 COG1233@1|root,COG1233@2|Bacteria,4PKWE@976|Bacteroidetes,2FNQX@200643|Bacteroidia,231HP@171551|Porphyromonadaceae 976|Bacteroidetes Q FAD dependent oxidoreductase - - - - - - - - - - - - FAD_oxidored PHJFGMMN_01926 411477.PARMER_00704 0.0 1257.0 COG1233@1|root,COG1233@2|Bacteria,4PKWE@976|Bacteroidetes,2FNQX@200643|Bacteroidia,231HP@171551|Porphyromonadaceae 976|Bacteroidetes Q FAD dependent oxidoreductase - - - - - - - - - - - - FAD_oxidored PHJFGMMN_01927 411477.PARMER_00705 0.0 957.0 COG0657@1|root,COG2755@1|root,COG0657@2|Bacteria,COG2755@2|Bacteria,4NJ8D@976|Bacteroidetes,2FXM8@200643|Bacteroidia 976|Bacteroidetes EI Carboxylesterase family - - - - - - - - - - - - Abhydrolase_3,DLH,Lipase_GDSL_2,Peptidase_S9 PHJFGMMN_01928 411477.PARMER_00706 1.21e-210 581.0 COG3669@1|root,COG3669@2|Bacteria,4NE74@976|Bacteroidetes,2FPVW@200643|Bacteroidia,22VX8@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha-L-fucosidase fucA - 3.2.1.51 ko:K01206 ko00511,map00511 - - - ko00000,ko00001,ko01000,ko04147 - GH29 - Alpha_L_fucos PHJFGMMN_01929 411477.PARMER_00707 4.44e-59 181.0 COG4225@1|root,COG4225@2|Bacteria 2|Bacteria S unsaturated chondroitin disaccharide hydrolase activity - - 3.2.1.172 ko:K15532 - - - - ko00000,ko01000 - GH105 - Glyco_hydro_88 PHJFGMMN_01930 411477.PARMER_00708 0.0 2630.0 COG2865@1|root,COG2865@2|Bacteria,4NZR7@976|Bacteroidetes,2FRAI@200643|Bacteroidia,22YW1@171551|Porphyromonadaceae 976|Bacteroidetes K Putative DNA-binding domain - - - - - - - - - - - - AlbA_2 PHJFGMMN_01931 411477.PARMER_00709 1.38e-273 749.0 COG0477@1|root,COG2814@2|Bacteria,4NI1T@976|Bacteroidetes,2FRJG@200643|Bacteroidia,22WZ5@171551|Porphyromonadaceae 976|Bacteroidetes EGP Major Facilitator Superfamily - - - - - - - - - - - - MFS_1 PHJFGMMN_01932 411477.PARMER_00710 0.0 1546.0 COG0577@1|root,COG0577@2|Bacteria,4NFGD@976|Bacteroidetes,2FNP6@200643|Bacteroidia,22VZ8@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD PHJFGMMN_01933 411477.PARMER_02262 0.0 1136.0 COG0577@1|root,COG0577@2|Bacteria,4NFGD@976|Bacteroidetes,2FNP6@200643|Bacteroidia,22VZ8@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD PHJFGMMN_01934 411477.PARMER_02263 7.14e-157 440.0 COG1136@1|root,COG1136@2|Bacteria,4NFDW@976|Bacteroidetes,2FMDA@200643|Bacteroidia,22W90@171551|Porphyromonadaceae 976|Bacteroidetes V bacteriocin export ABC transporter, lactococcin 972 group - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran PHJFGMMN_01935 411477.PARMER_02264 0.0 1482.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FPEN@200643|Bacteroidia,22X01@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter permease - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD PHJFGMMN_01936 411477.PARMER_02265 2.41e-197 547.0 2BGV8@1|root,32AUY@2|Bacteria,4P9FA@976|Bacteroidetes,2FZ9Z@200643|Bacteroidia,231AQ@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01938 411477.PARMER_02268 0.0 1155.0 COG5002@1|root,COG5002@2|Bacteria,4NETP@976|Bacteroidetes,2FKYG@200643|Bacteroidia,22W46@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase - - 2.7.13.3 ko:K02484,ko:K07636 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA PHJFGMMN_01939 411477.PARMER_02269 1.18e-156 440.0 COG0745@1|root,COG0745@2|Bacteria,4NG7D@976|Bacteroidetes,2FMJH@200643|Bacteroidia,22X7P@171551|Porphyromonadaceae 976|Bacteroidetes T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain srrA - - ko:K07657,ko:K07658 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C PHJFGMMN_01940 999419.HMPREF1077_01311 8.85e-208 573.0 COG1387@1|root,COG1387@2|Bacteria,4NIJU@976|Bacteroidetes,2FM5K@200643|Bacteroidia,22WVR@171551|Porphyromonadaceae 976|Bacteroidetes E Histidinol phosphatase - - 3.1.3.15 ko:K04486 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R03013 RC00017 ko00000,ko00001,ko00002,ko01000 - - - PHP PHJFGMMN_01941 411477.PARMER_02271 2.86e-287 784.0 COG0156@1|root,COG0156@2|Bacteria,4NFBU@976|Bacteroidetes,2FN0E@200643|Bacteroidia,22WXW@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA kbl - 2.3.1.29 ko:K00639 ko00260,map00260 - R00371 RC00004,RC00394 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 PHJFGMMN_01943 411477.PARMER_02272 4.36e-233 641.0 COG0451@1|root,COG0451@2|Bacteria,4NE3U@976|Bacteroidetes,2FNS7@200643|Bacteroidia,22VZ9@171551|Porphyromonadaceae 976|Bacteroidetes GM NAD dependent epimerase dehydratase family ltd - - - - - - - - - - - Epimerase PHJFGMMN_01944 411477.PARMER_02273 1.16e-239 658.0 COG0667@1|root,COG0667@2|Bacteria,4NFCN@976|Bacteroidetes,2FMAG@200643|Bacteroidia,22W5H@171551|Porphyromonadaceae 976|Bacteroidetes C Aldo/keto reductase family gpr - - ko:K19265 - - - - ko00000,ko01000 - - - Aldo_ket_red PHJFGMMN_01945 411477.PARMER_02275 0.0 1923.0 COG2887@1|root,COG3893@1|root,COG2887@2|Bacteria,COG3893@2|Bacteria,4NFZQ@976|Bacteroidetes,2FN03@200643|Bacteroidia,22W74@171551|Porphyromonadaceae 976|Bacteroidetes L PD-(D/E)XK nuclease superfamily - - - - - - - - - - - - PDDEXK_1 PHJFGMMN_01946 411477.PARMER_02276 4.73e-168 469.0 COG5587@1|root,COG5587@2|Bacteria,4NNS3@976|Bacteroidetes,2FPZZ@200643|Bacteroidia,22XWU@171551|Porphyromonadaceae 976|Bacteroidetes S Conserved hypothetical protein (DUF2461) - - - - - - - - - - - - DUF2461 PHJFGMMN_01947 411477.PARMER_02277 5.81e-217 597.0 COG2207@1|root,COG2207@2|Bacteria,4NE6T@976|Bacteroidetes,2FT6Q@200643|Bacteroidia,231T6@171551|Porphyromonadaceae 976|Bacteroidetes K Cupin domain - - - - - - - - - - - - Cupin_2,HTH_18 PHJFGMMN_01948 999419.HMPREF1077_01319 1.18e-269 739.0 COG0477@1|root,COG2814@2|Bacteria,4NESW@976|Bacteroidetes,2FM8C@200643|Bacteroidia,22XA6@171551|Porphyromonadaceae 976|Bacteroidetes EGP Major Facilitator Superfamily araJ - - ko:K08156 - - - - ko00000,ko02000 2.A.1.2.14 - - MFS_1,Sugar_tr PHJFGMMN_01949 411477.PARMER_02284 0.0 966.0 COG1453@1|root,COG1453@2|Bacteria,4NGCW@976|Bacteroidetes,2FPG8@200643|Bacteroidia,22WYY@171551|Porphyromonadaceae 976|Bacteroidetes S Aldo/keto reductase family - - - ko:K07079 - - - - ko00000 - - - Aldo_ket_red,Fer4_17 PHJFGMMN_01950 411477.PARMER_02285 0.0 1022.0 COG0348@1|root,COG1143@1|root,COG0348@2|Bacteria,COG1143@2|Bacteria,4NHSX@976|Bacteroidetes,2FN5F@200643|Bacteroidia,22W4S@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S binding domain yccM - - - - - - - - - - - Fer4,Fer4_5,Fer4_7,Fer4_9 PHJFGMMN_01951 411477.PARMER_02286 5.82e-220 605.0 COG0627@1|root,COG0627@2|Bacteria,4NGI8@976|Bacteroidetes,2FQ6R@200643|Bacteroidia,2304Q@171551|Porphyromonadaceae 976|Bacteroidetes S Putative esterase xynZ - - - - - - - - - - - Esterase PHJFGMMN_01952 411477.PARMER_02287 2.59e-227 625.0 COG1893@1|root,COG1893@2|Bacteria,4NMFF@976|Bacteroidetes,2FNZU@200643|Bacteroidia,22XU7@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid panE - 1.1.1.169 ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R02472 RC00726 ko00000,ko00001,ko00002,ko01000 - - - ApbA,ApbA_C PHJFGMMN_01953 411477.PARMER_02288 1.03e-204 566.0 COG2240@1|root,COG2240@2|Bacteria,4NNJP@976|Bacteroidetes,2FNIJ@200643|Bacteroidia,22Z9M@171551|Porphyromonadaceae 976|Bacteroidetes H Phosphomethylpyrimidine kinase pdxK - 2.7.1.35 ko:K00868 ko00750,ko01100,map00750,map01100 - R00174,R01909,R02493 RC00002,RC00017 ko00000,ko00001,ko01000 - - - Phos_pyr_kin PHJFGMMN_01954 411477.PARMER_02289 3.99e-243 667.0 COG0225@1|root,COG0229@1|root,COG0225@2|Bacteria,COG0229@2|Bacteria,4NMAJ@976|Bacteroidetes,2FNTE@200643|Bacteroidia,22XGW@171551|Porphyromonadaceae 976|Bacteroidetes O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine msrA - 1.8.4.11,1.8.4.12 ko:K12267 - - - - ko00000,ko01000 - - - PMSR,SelR PHJFGMMN_01955 411477.PARMER_02290 1.52e-285 780.0 COG2311@1|root,COG2311@2|Bacteria,4NG01@976|Bacteroidetes,2FNJU@200643|Bacteroidia,22WJT@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF418) - - - ko:K07148 - - - - ko00000 - - - DUF1624,DUF418 PHJFGMMN_01956 742727.HMPREF9447_01065 0.0 914.0 COG0582@1|root,COG0582@2|Bacteria,4NF8X@976|Bacteroidetes,2FM2R@200643|Bacteroidia,4AKQM@815|Bacteroidaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_01957 742727.HMPREF9447_01066 1.75e-312 851.0 COG4804@1|root,COG4804@2|Bacteria,4NE0Q@976|Bacteroidetes,2FN3T@200643|Bacteroidia,4AMFH@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - DUF1016 PHJFGMMN_01958 880074.BARVI_06465 2e-240 661.0 2E31N@1|root,32Y21@2|Bacteria,4NX1F@976|Bacteroidetes,2FPRT@200643|Bacteroidia,230W1@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_01959 742727.HMPREF9447_01068 5.44e-56 174.0 2DYYR@1|root,32V69@2|Bacteria,4NUAY@976|Bacteroidetes,2FTBN@200643|Bacteroidia,4ARBA@815|Bacteroidaceae 976|Bacteroidetes S Protein of unknown function (DUF3853) - - - - - - - - - - - - DUF3853 PHJFGMMN_01960 742727.HMPREF9447_01069 8.7e-257 704.0 COG0467@1|root,COG0467@2|Bacteria,4NIAQ@976|Bacteroidetes,2FMJT@200643|Bacteroidia,4AKM8@815|Bacteroidaceae 976|Bacteroidetes T COG NOG25714 non supervised orthologous group - - - - - - - - - - - - AAA_25 PHJFGMMN_01961 742727.HMPREF9447_01070 1.29e-235 647.0 COG0358@1|root,COG0358@2|Bacteria,4NH5X@976|Bacteroidetes,2FPHT@200643|Bacteroidia,4AKC7@815|Bacteroidaceae 976|Bacteroidetes L Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - Toprim_2,zf-CHC2 PHJFGMMN_01962 742727.HMPREF9447_01071 0.0 918.0 COG1193@1|root,COG1193@2|Bacteria,4NGAY@976|Bacteroidetes,2FMXZ@200643|Bacteroidia,4AMPN@815|Bacteroidaceae 976|Bacteroidetes L Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_01963 1121101.HMPREF1532_00490 2.4e-86 253.0 COG3631@1|root,COG3631@2|Bacteria,4NP12@976|Bacteroidetes,2FS43@200643|Bacteroidia,4AQKC@815|Bacteroidaceae 976|Bacteroidetes S SnoaL-like polyketide cyclase - - - - - - - - - - - - SnoaL,SnoaL_2 PHJFGMMN_01964 1121101.HMPREF1532_00491 8.82e-26 95.1 2A7R5@1|root,30WPY@2|Bacteria,4PA36@976|Bacteroidetes,2FUQ9@200643|Bacteroidia,4AUXV@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01965 742727.HMPREF9447_01074 2.44e-125 356.0 COG0617@1|root,COG0617@2|Bacteria,4NZY6@976|Bacteroidetes,2FQ7N@200643|Bacteroidia,4ANDV@815|Bacteroidaceae 976|Bacteroidetes J Aminoglycoside-2''-adenylyltransferase - - - ko:K19545 - - - - ko00000,ko01504 - - - Aminoglyc_resit PHJFGMMN_01966 585543.HMPREF0969_02844 3.18e-282 772.0 COG2270@1|root,COG2270@2|Bacteria,4PM3J@976|Bacteroidetes,2FQ2T@200643|Bacteroidia,4AP4Z@815|Bacteroidaceae 976|Bacteroidetes S Transmembrane secretion effector - - - ko:K08217 - - - - br01600,ko00000,ko01504,ko02000 2.A.1.21.1,2.A.1.21.22 - - MFS_1 PHJFGMMN_01968 411477.PARMER_02295 5.2e-103 298.0 COG3118@1|root,COG3118@2|Bacteria,4NQNX@976|Bacteroidetes,2FTIN@200643|Bacteroidia,230AB@171551|Porphyromonadaceae 976|Bacteroidetes O Thioredoxin - - - - - - - - - - - - Thioredoxin PHJFGMMN_01969 411477.PARMER_02296 7.23e-108 313.0 COG0228@1|root,COG0228@2|Bacteria,4NNY8@976|Bacteroidetes,2FN6N@200643|Bacteroidia,22XNN@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bS16 family rpsP GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02959 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011,ko03029 - - - Ribosomal_S16 PHJFGMMN_01970 411477.PARMER_02297 3.69e-232 638.0 COG3507@1|root,COG3507@2|Bacteria,4NGKH@976|Bacteroidetes,2FP3Q@200643|Bacteroidia,2307H@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 43 family abnA - - - - - - - - - - - Glyco_hydro_43 PHJFGMMN_01971 411477.PARMER_02298 1.13e-223 615.0 COG2207@1|root,COG2207@2|Bacteria,4NDYY@976|Bacteroidetes,2FNFA@200643|Bacteroidia,22ZEU@171551|Porphyromonadaceae 976|Bacteroidetes K transcriptional regulator (AraC family) - - - - - - - - - - - - HTH_18 PHJFGMMN_01972 411477.PARMER_02299 1.85e-287 785.0 COG0667@1|root,COG0667@2|Bacteria,4NEB0@976|Bacteroidetes,2FMYE@200643|Bacteroidia,22XRR@171551|Porphyromonadaceae 976|Bacteroidetes C related to aryl-alcohol - - - - - - - - - - - - Aldo_ket_red,TAT_signal PHJFGMMN_01973 411477.PARMER_02300 2.4e-258 706.0 COG1075@1|root,COG1075@2|Bacteria,4NFSV@976|Bacteroidetes,2FNWB@200643|Bacteroidia,22XH0@171551|Porphyromonadaceae 976|Bacteroidetes S Alpha/beta hydrolase family - - - - - - - - - - - - Abhydrolase_6 PHJFGMMN_01974 411477.PARMER_02301 0.0 1049.0 COG0488@1|root,COG0488@2|Bacteria,4NG1W@976|Bacteroidetes,2FMY5@200643|Bacteroidia,22W6R@171551|Porphyromonadaceae 976|Bacteroidetes S glycosyl transferase family 2 - - - ko:K06158 - - - - ko00000,ko03012 - - - ABC_tran,ABC_tran_Xtn PHJFGMMN_01975 411477.PARMER_02302 0.0 1023.0 COG3047@1|root,COG3047@2|Bacteria,4PMUX@976|Bacteroidetes,2G0HA@200643|Bacteroidia,23242@171551|Porphyromonadaceae 976|Bacteroidetes M Domain of unknown function (DUF3943) - - - - - - - - - - - - DUF3943 PHJFGMMN_01976 411477.PARMER_02303 4.19e-140 396.0 COG2860@1|root,COG2860@2|Bacteria,4NEXS@976|Bacteroidetes,2FMPZ@200643|Bacteroidia,22W41@171551|Porphyromonadaceae 976|Bacteroidetes S membrane yadS - - - - - - - - - - - UPF0126 PHJFGMMN_01977 411477.PARMER_02304 1.2e-261 716.0 COG0252@1|root,COG0252@2|Bacteria,4NE2Z@976|Bacteroidetes,2FM3E@200643|Bacteroidia,22VV2@171551|Porphyromonadaceae 976|Bacteroidetes EJ L-asparaginase, type I ansA - 3.5.1.1 ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 - R00485 RC00010,RC02798 ko00000,ko00001,ko01000 - - - Asparaginase PHJFGMMN_01978 411477.PARMER_02305 8.12e-197 545.0 COG1235@1|root,COG1235@2|Bacteria,4NDVI@976|Bacteroidetes,2FN8Y@200643|Bacteroidia,22WMP@171551|Porphyromonadaceae 976|Bacteroidetes S metallo-beta-lactamase vicX - - - - - - - - - - - Lactamase_B,Lactamase_B_2 PHJFGMMN_01981 411477.PARMER_02310 1.89e-298 813.0 COG0457@1|root,COG0457@2|Bacteria,4NJEF@976|Bacteroidetes,2FS5G@200643|Bacteroidia,22ZDU@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - PMT_2,TPR_1,TPR_16,TPR_2,TPR_8 PHJFGMMN_01983 411477.PARMER_02311 6.64e-275 753.0 COG3391@1|root,COG3391@2|Bacteria,4NVSJ@976|Bacteroidetes,2FVH9@200643|Bacteroidia,230RV@171551|Porphyromonadaceae 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 PHJFGMMN_01985 411477.PARMER_02313 2.15e-166 464.0 COG0681@1|root,COG0681@2|Bacteria,4NRG2@976|Bacteroidetes,2FTDJ@200643|Bacteroidia,22Y5E@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the peptidase S26 family - - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24,Peptidase_S26 PHJFGMMN_01986 411477.PARMER_02314 6.84e-103 297.0 COG0698@1|root,COG0698@2|Bacteria,4NNSU@976|Bacteroidetes,2FT1X@200643|Bacteroidia,22XV0@171551|Porphyromonadaceae 976|Bacteroidetes G Ribose 5-phosphate isomerase rpiB - 5.3.1.6 ko:K01808 ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01056,R09030 RC00376,RC00434 ko00000,ko00001,ko00002,ko01000 - - - LacAB_rpiB PHJFGMMN_01987 411477.PARMER_02315 0.0 1328.0 COG0021@1|root,COG0021@2|Bacteria,4P14U@976|Bacteroidetes,2FN0P@200643|Bacteroidia,22WF7@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the transketolase family tkt - 2.2.1.1 ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01067,R01641,R01830,R06590 RC00032,RC00226,RC00571,RC01560 ko00000,ko00001,ko00002,ko01000 - - - Transket_pyr,Transketolase_C,Transketolase_N PHJFGMMN_01988 411477.PARMER_02316 4.66e-164 459.0 COG1051@1|root,COG1051@2|Bacteria,4NE29@976|Bacteroidetes,2G31G@200643|Bacteroidia,22X8R@171551|Porphyromonadaceae 976|Bacteroidetes F NUDIX domain - - - - - - - - - - - - NUDIX PHJFGMMN_01989 411477.PARMER_02317 6.39e-281 767.0 COG0153@1|root,COG0153@2|Bacteria,4NE0C@976|Bacteroidetes,2FNGC@200643|Bacteroidia,22WKE@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the GHMP kinase family. GalK subfamily galK - 2.7.1.6 ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00554,M00632 R01092 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko04147 - - - GHMP_kinases_C,GHMP_kinases_N,GalKase_gal_bdg PHJFGMMN_01990 411477.PARMER_02318 1e-289 792.0 COG0738@1|root,COG0738@2|Bacteria,4NEPI@976|Bacteroidetes,2FP0B@200643|Bacteroidia,22X1V@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator gluP - - ko:K02429 - - - - ko00000,ko02000 2.A.1.7 - - MFS_1 PHJFGMMN_01991 411477.PARMER_02319 3.22e-272 743.0 COG2017@1|root,COG2017@2|Bacteria,4NF5G@976|Bacteroidetes,2FMMZ@200643|Bacteroidia,22WBQ@171551|Porphyromonadaceae 976|Bacteroidetes G Converts alpha-aldose to the beta-anomer - - 5.1.3.3 ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 M00632 R01602,R10619 RC00563 ko00000,ko00001,ko00002,ko01000 - - - Aldose_epim PHJFGMMN_01992 411477.PARMER_02320 0.0 1354.0 COG3534@1|root,COG3534@2|Bacteria,4NGKW@976|Bacteroidetes,2FM0F@200643|Bacteroidia,22WCS@171551|Porphyromonadaceae 976|Bacteroidetes G PFAM alpha-L-arabinofuranosidase domain protein - - 3.2.1.55 ko:K01209 ko00520,map00520 - R01762 - ko00000,ko00001,ko01000 - GH51 - Alpha-L-AF_C,CBM_4_9 PHJFGMMN_01993 411477.PARMER_02322 4.99e-239 657.0 COG1073@1|root,COG1073@2|Bacteria,4NFJZ@976|Bacteroidetes,2FMNP@200643|Bacteroidia,22W0J@171551|Porphyromonadaceae 976|Bacteroidetes S COG COG1073 Hydrolases of the alpha beta superfamily - - - ko:K06889 - - - - ko00000 - - - AXE1,DLH,Peptidase_S15 PHJFGMMN_01994 411477.PARMER_02323 0.0 1011.0 28KQC@1|root,2ZA86@2|Bacteria,4PKWK@976|Bacteroidetes,2FMPR@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01995 411477.PARMER_02325 1.12e-215 596.0 COG0524@1|root,COG0524@2|Bacteria,4NENQ@976|Bacteroidetes,2FPM3@200643|Bacteroidia,22XY8@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway rbsK - 2.7.1.15 ko:K00852 ko00030,map00030 - R01051,R02750 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PfkB PHJFGMMN_01996 411477.PARMER_02326 1.08e-248 682.0 COG1957@1|root,COG1957@2|Bacteria,4NH09@976|Bacteroidetes,2FRDT@200643|Bacteroidia,230Q0@171551|Porphyromonadaceae 976|Bacteroidetes F Inosine-uridine preferring nucleoside hydrolase - - - - - - - - - - - - IU_nuc_hydro PHJFGMMN_01997 411477.PARMER_02327 6.39e-234 644.0 COG4975@1|root,COG4975@2|Bacteria,4NF22@976|Bacteroidetes,2FMYN@200643|Bacteroidia,22X3I@171551|Porphyromonadaceae 976|Bacteroidetes G Sugar transport protein glcU - - ko:K05340 - - - - ko00000,ko02000 2.A.7.5 - - Ureide_permease PHJFGMMN_01998 411477.PARMER_02329 8e-176 490.0 2B0HH@1|root,31SV0@2|Bacteria,4NRU4@976|Bacteroidetes,2FTFR@200643|Bacteroidia,22Y90@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_01999 411477.PARMER_02330 1.45e-85 252.0 COG2246@1|root,COG2246@2|Bacteria,4NVF9@976|Bacteroidetes,2FUTU@200643|Bacteroidia,22YT7@171551|Porphyromonadaceae 976|Bacteroidetes S GtrA-like protein - - - - - - - - - - - - GtrA PHJFGMMN_02000 411477.PARMER_02331 7.65e-224 617.0 COG0463@1|root,COG0463@2|Bacteria,4NGGM@976|Bacteroidetes,2FMW6@200643|Bacteroidia,22XG6@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase - - - ko:K20534 - - - - ko00000,ko01000,ko01005,ko02000 4.D.2.1.9 GT2 - Glycos_transf_2 PHJFGMMN_02001 411477.PARMER_02332 1.6e-94 275.0 COG3871@1|root,COG3871@2|Bacteria,4NTQW@976|Bacteroidetes,2FS0Y@200643|Bacteroidia 976|Bacteroidetes K stress protein (general stress protein 26) - - - - - - - - - - - - Pyrid_ox_like PHJFGMMN_02002 411477.PARMER_02333 8.85e-207 570.0 COG2207@1|root,COG2207@2|Bacteria,4NRFM@976|Bacteroidetes,2FMZV@200643|Bacteroidia,22Y4E@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_18 PHJFGMMN_02003 411477.PARMER_02334 8.94e-272 744.0 COG1929@1|root,COG1929@2|Bacteria,4NFK8@976|Bacteroidetes,2FP0A@200643|Bacteroidia,22WR9@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycerate kinase type-1 family glxK - 2.7.1.165 ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 - R08572 RC00002,RC00428 ko00000,ko00001,ko01000 - - - Gly_kinase PHJFGMMN_02004 411477.PARMER_02335 0.0 978.0 COG0362@1|root,COG0362@2|Bacteria,4NG05@976|Bacteroidetes,2FMFW@200643|Bacteroidia,22WS9@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH gnd - 1.1.1.343,1.1.1.44 ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 M00004,M00006 R01528,R10221 RC00001,RC00539 ko00000,ko00001,ko00002,ko01000 - - - 6PGD,NAD_binding_2 PHJFGMMN_02005 411477.PARMER_02336 0.0 1002.0 COG0364@1|root,COG0364@2|Bacteria,4NE59@976|Bacteroidetes,2FNER@200643|Bacteroidia,22WB5@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone zwf - 1.1.1.363,1.1.1.49 ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 M00004,M00006,M00008 R00835,R02736,R10907 RC00001,RC00066 ko00000,ko00001,ko00002,ko01000,ko04147 - - - G6PD_C,G6PD_N PHJFGMMN_02006 411477.PARMER_02337 1.15e-175 488.0 COG0363@1|root,COG0363@2|Bacteria,4NGB9@976|Bacteroidetes,2FNZF@200643|Bacteroidia,22XT3@171551|Porphyromonadaceae 976|Bacteroidetes G 6-phosphogluconolactonase pgl - 3.1.1.31 ko:K01057 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 M00004,M00006,M00008 R02035 RC00537 ko00000,ko00001,ko00002,ko01000 - - - Glucosamine_iso PHJFGMMN_02007 411477.PARMER_02338 1.16e-209 580.0 COG2035@1|root,COG2035@2|Bacteria,4NFKI@976|Bacteroidetes,2FPD1@200643|Bacteroidia,22WH6@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF368) - - - ko:K08974 - - - - ko00000 - - - DUF368 PHJFGMMN_02008 411477.PARMER_02339 2.84e-293 806.0 COG0457@1|root,COG0457@2|Bacteria,4NG1I@976|Bacteroidetes,2FQPG@200643|Bacteroidia,22YCD@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_1,TPR_16,TPR_19,TPR_2,TPR_6,TPR_7,TPR_8 PHJFGMMN_02009 411477.PARMER_02340 0.0 1196.0 COG0008@1|root,COG0008@2|Bacteria,4NFCC@976|Bacteroidetes,2FMVI@200643|Bacteroidia,22W5Z@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA glnS - 6.1.1.18 ko:K01886 ko00970,ko01100,map00970,map01100 M00359,M00360 R03652 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_1c,tRNA-synt_1c_C PHJFGMMN_02010 411477.PARMER_02343 8.15e-284 777.0 COG1914@1|root,COG1914@2|Bacteria,4NENE@976|Bacteroidetes,2FP05@200643|Bacteroidia,22W56@171551|Porphyromonadaceae 976|Bacteroidetes P Natural resistance-associated macrophage protein mntH - - ko:K03322 - - - - ko00000,ko02000 2.A.55.2.6,2.A.55.3 - - Nramp,Usp PHJFGMMN_02011 411477.PARMER_02344 2.39e-310 846.0 COG5000@1|root,COG5000@2|Bacteria,4NEWF@976|Bacteroidetes,2FMRD@200643|Bacteroidia,22WZW@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase - - - - - - - - - - - - HATPase_c,PAS_8 PHJFGMMN_02012 411477.PARMER_02345 0.0 882.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMRV@200643|Bacteroidia,22W60@171551|Porphyromonadaceae 976|Bacteroidetes T COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains zraR_2 - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat PHJFGMMN_02013 411477.PARMER_02347 6.65e-315 858.0 COG1538@1|root,COG1538@2|Bacteria,4NJ4M@976|Bacteroidetes,2FN0S@200643|Bacteroidia,22WDV@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 - - OEP PHJFGMMN_02014 411477.PARMER_02348 2.69e-277 761.0 COG0845@1|root,COG0845@2|Bacteria,4NDUH@976|Bacteroidetes,2FM9Q@200643|Bacteroidia,22W2T@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 PHJFGMMN_02015 411477.PARMER_02349 3.36e-219 605.0 COG2070@1|root,COG2070@2|Bacteria,4NF8Z@976|Bacteroidetes,2FMYA@200643|Bacteroidia,22X2W@171551|Porphyromonadaceae 976|Bacteroidetes S 2-nitropropane dioxygenase fabK - 1.3.1.9 ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00083 R04429,R04724,R04955,R04958,R04961,R04966,R04969,R07765 RC00052,RC00076 ko00000,ko00001,ko00002,ko01000,ko01004 - - - NMO PHJFGMMN_02017 411477.PARMER_02353 0.0 1415.0 COG0339@1|root,COG0339@2|Bacteria,4NFYA@976|Bacteroidetes,2FNQV@200643|Bacteroidia,22WQA@171551|Porphyromonadaceae 976|Bacteroidetes E Peptidase family M3 - - 3.4.15.5 ko:K01284 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M3 PHJFGMMN_02018 411477.PARMER_02354 1.77e-90 264.0 COG3254@1|root,COG3254@2|Bacteria,4NQRF@976|Bacteroidetes,2FSQ6@200643|Bacteroidia,2321D@171551|Porphyromonadaceae 976|Bacteroidetes G Pfam:DUF718 - - 5.1.3.32 ko:K03534 - - R10819 RC00563 ko00000,ko01000 - - - rhaM PHJFGMMN_02019 411477.PARMER_02355 3.97e-297 810.0 COG4677@1|root,COG4677@2|Bacteria,4NF12@976|Bacteroidetes,2FM66@200643|Bacteroidia,22XHJ@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF4861) - - 3.1.1.11 ko:K01051 ko00040,ko01100,map00040,map01100 M00081 R02362 RC00460,RC00461 ko00000,ko00001,ko00002,ko01000 - - - DUF4861 PHJFGMMN_02020 411477.PARMER_02357 6.42e-140 395.0 COG3525@1|root,COG3525@2|Bacteria,4NDVT@976|Bacteroidetes,2FPR9@200643|Bacteroidia 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - Glyco_hydro_20,Glyco_hydro_20b,LRR_5 PHJFGMMN_02021 411477.PARMER_02358 0.0 870.0 COG1875@1|root,COG1875@2|Bacteria,4NDUI@976|Bacteroidetes,2FP3H@200643|Bacteroidia,22W36@171551|Porphyromonadaceae 976|Bacteroidetes T Phosphate starvation protein PhoH ybeZ_1 - - ko:K07175 - - - - ko00000 - - - PIN_4,PhoH PHJFGMMN_02022 411477.PARMER_02359 1.53e-82 243.0 2DMZP@1|root,32UMQ@2|Bacteria,4P3H1@976|Bacteroidetes,2FT4E@200643|Bacteroidia,230IW@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3795) - - - - - - - - - - - - DUF3795 PHJFGMMN_02023 411477.PARMER_02360 1.97e-107 310.0 COG2839@1|root,COG2839@2|Bacteria,4NNIY@976|Bacteroidetes,2FS52@200643|Bacteroidia,22YAI@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF456) - - - ko:K09793 - - - - ko00000 - - - DUF456 PHJFGMMN_02024 411477.PARMER_02361 4.48e-117 334.0 COG2050@1|root,COG2050@2|Bacteria,4NRF7@976|Bacteroidetes,2G31E@200643|Bacteroidia,22YDT@171551|Porphyromonadaceae 976|Bacteroidetes Q Thioesterase superfamily - - - - - - - - - - - - 4HBT PHJFGMMN_02025 411477.PARMER_02362 5.53e-205 566.0 COG0648@1|root,COG0648@2|Bacteria,4NJDP@976|Bacteroidetes,2FPM6@200643|Bacteroidia,22WPU@171551|Porphyromonadaceae 976|Bacteroidetes L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin nfo GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 ko:K01151 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - AP_endonuc_2 PHJFGMMN_02026 411477.PARMER_02363 0.0 907.0 COG1055@1|root,COG1055@2|Bacteria,4P1MF@976|Bacteroidetes,2FXAM@200643|Bacteroidia,22ZNM@171551|Porphyromonadaceae 976|Bacteroidetes P Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - CitMHS PHJFGMMN_02027 411477.PARMER_02364 0.0 1131.0 COG4690@1|root,COG4690@2|Bacteria,4NE03@976|Bacteroidetes,2FPSX@200643|Bacteroidia,22WBK@171551|Porphyromonadaceae 976|Bacteroidetes M Dipeptidase - - - - - - - - - - - - Peptidase_C69 PHJFGMMN_02028 411477.PARMER_02365 2.07e-104 302.0 COG3637@1|root,COG3637@2|Bacteria,4NXWX@976|Bacteroidetes,2FRFV@200643|Bacteroidia,22YTA@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl PHJFGMMN_02029 411477.PARMER_02366 2.42e-152 428.0 COG0637@1|root,COG0637@2|Bacteria,4NEEH@976|Bacteroidetes,2FM7C@200643|Bacteroidia,22Y09@171551|Porphyromonadaceae 976|Bacteroidetes S Haloacid dehalogenase-like hydrolase pgmB - - - - - - - - - - - HAD_2 PHJFGMMN_02030 411477.PARMER_02367 0.0 974.0 COG1082@1|root,COG2152@1|root,COG1082@2|Bacteria,COG2152@2|Bacteria,4NGDZ@976|Bacteroidetes,2FP8T@200643|Bacteroidia,22VZ2@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 PHJFGMMN_02031 411477.PARMER_02368 0.0 920.0 COG0673@1|root,COG0673@2|Bacteria,4NHDS@976|Bacteroidetes,2FWWS@200643|Bacteroidia,22ZPV@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C PHJFGMMN_02032 411477.PARMER_02369 0.0 1134.0 COG1807@1|root,COG1807@2|Bacteria,4NKI5@976|Bacteroidetes,2FMT9@200643|Bacteroidia,22WVD@171551|Porphyromonadaceae 976|Bacteroidetes M Dolichyl-phosphate-mannose-protein mannosyltransferase arnT - - - - - - - - - - - PMT_2 PHJFGMMN_02033 411477.PARMER_02370 0.0 1025.0 COG1123@1|root,COG1123@2|Bacteria,4NIKC@976|Bacteroidetes,2FQ7J@200643|Bacteroidia,22X6G@171551|Porphyromonadaceae 976|Bacteroidetes P Protein of unknown function (DUF4435) - - - - - - - - - - - - AAA_21,DUF4435 PHJFGMMN_02034 411477.PARMER_02371 0.0 997.0 COG0442@1|root,COG0442@2|Bacteria,4NEAF@976|Bacteroidetes,2FMZT@200643|Bacteroidia,22X3K@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) proS GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 ko:K01881 ko00970,map00970 M00359,M00360 R03661 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - HGTP_anticodon,ProRS-C_1,tRNA-synt_2b PHJFGMMN_02035 411477.PARMER_02373 6.61e-293 802.0 COG0126@1|root,COG0126@2|Bacteria,4NFW2@976|Bacteroidetes,2FM2Q@200643|Bacteroidia,22WBD@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the phosphoglycerate kinase family pgk - 2.7.2.3 ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01512 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000,ko04147 - - - PGK PHJFGMMN_02036 411477.PARMER_02374 4.34e-271 744.0 COG1470@1|root,COG1470@2|Bacteria,4NHIX@976|Bacteroidetes,2FN9I@200643|Bacteroidia,22WAR@171551|Porphyromonadaceae 976|Bacteroidetes S NPCBM-associated, NEW3 domain of alpha-galactosidase - - - - - - - - - - - - NPCBM_assoc PHJFGMMN_02037 411477.PARMER_02375 4.14e-175 488.0 COG1131@1|root,COG1131@2|Bacteria,4NFNM@976|Bacteroidetes,2FM6N@200643|Bacteroidia,22WPT@171551|Porphyromonadaceae 976|Bacteroidetes V AAA domain, putative AbiEii toxin, Type IV TA system yxlF_1 - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran PHJFGMMN_02038 999419.HMPREF1077_03288 1.67e-225 623.0 COG1277@1|root,COG1277@2|Bacteria,4NGAT@976|Bacteroidetes,2FP5B@200643|Bacteroidia,22WDU@171551|Porphyromonadaceae 976|Bacteroidetes S ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_2 PHJFGMMN_02039 411477.PARMER_02377 1.1e-107 310.0 COG0013@1|root,COG0013@2|Bacteria,4NNPX@976|Bacteroidetes,2FTMB@200643|Bacteroidia,22Y13@171551|Porphyromonadaceae 976|Bacteroidetes J Threonyl and Alanyl tRNA synthetase second additional domain - - - - - - - - - - - - tRNA_SAD PHJFGMMN_02040 411477.PARMER_02378 8.54e-270 737.0 COG1247@1|root,COG1670@1|root,COG1247@2|Bacteria,COG1670@2|Bacteria,4NQ4Z@976|Bacteroidetes,2FSTX@200643|Bacteroidia,22XX3@171551|Porphyromonadaceae 976|Bacteroidetes J Acetyltransferase (GNAT) domain - - - ko:K03817 - - - - ko00000,ko01000,ko03009 - - - Acetyltransf_1,Acetyltransf_3 PHJFGMMN_02042 411477.PARMER_02380 0.0 953.0 COG5016@1|root,COG5016@2|Bacteria,4PKTH@976|Bacteroidetes,2G35Q@200643|Bacteroidia,22WXX@171551|Porphyromonadaceae 976|Bacteroidetes C Conserved carboxylase domain - - 4.1.1.3,6.4.1.1 ko:K01571,ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 M00173,M00620 R00217,R00344 RC00040,RC00367 ko00000,ko00001,ko00002,ko01000,ko02000 3.B.1.1.1 - - Biotin_lipoyl,Biotin_lipoyl_2,HMGL-like,PYC_OADA PHJFGMMN_02043 411477.PARMER_02382 0.0 1016.0 COG4735@1|root,COG4735@2|Bacteria,4NF74@976|Bacteroidetes,2FM2A@200643|Bacteroidia,22WRJ@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location - - - - - - - - - - - - - PHJFGMMN_02048 411477.PARMER_02389 6.22e-266 729.0 COG0845@1|root,COG0845@2|Bacteria,4NEXN@976|Bacteroidetes,2FRWB@200643|Bacteroidia,231FI@171551|Porphyromonadaceae 976|Bacteroidetes M Biotin-lipoyl like - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - Biotin_lipoyl,Biotin_lipoyl_2,HlyD_3,HlyD_D23 PHJFGMMN_02049 411477.PARMER_02390 0.0 1953.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FM3B@200643|Bacteroidia,22WZM@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran,OEP PHJFGMMN_02050 411477.PARMER_02391 0.0 944.0 COG1538@1|root,COG1538@2|Bacteria,4NDZK@976|Bacteroidetes,2FND5@200643|Bacteroidia,22W3J@171551|Porphyromonadaceae 976|Bacteroidetes MU Efflux transporter, outer membrane factor - - - - - - - - - - - - OEP PHJFGMMN_02051 411477.PARMER_02393 0.0 1036.0 COG0388@1|root,COG0388@2|Bacteria,4NEAQ@976|Bacteroidetes,2FNGK@200643|Bacteroidia,22WA7@171551|Porphyromonadaceae 976|Bacteroidetes S Carbon-nitrogen hydrolase ramA_2 - - - - - - - - - - - Acetyltransf_1,CN_hydrolase PHJFGMMN_02052 411477.PARMER_02394 0.0 1383.0 COG1509@1|root,COG1509@2|Bacteria,4NK6C@976|Bacteroidetes,2FMW5@200643|Bacteroidia,22X48@171551|Porphyromonadaceae 976|Bacteroidetes E KamA family eam - 5.4.3.2 ko:K01843 ko00310,map00310 - R00461 RC00303 ko00000,ko00001,ko01000 - - - - PHJFGMMN_02053 411477.PARMER_02395 1.1e-120 345.0 COG4739@1|root,COG4739@2|Bacteria,4NPX4@976|Bacteroidetes,2FM7U@200643|Bacteroidia,22Y20@171551|Porphyromonadaceae 976|Bacteroidetes S Uncharacterized protein containing a ferredoxin domain (DUF2148) - - - - - - - - - - - - DUF2148 PHJFGMMN_02054 411477.PARMER_02396 6.11e-229 630.0 2AHY8@1|root,318BB@2|Bacteria,4NNZG@976|Bacteroidetes 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02055 411477.PARMER_02397 0.0 888.0 COG1066@1|root,COG1066@2|Bacteria,4NEYA@976|Bacteroidetes,2FMRM@200643|Bacteroidia,22VX3@171551|Porphyromonadaceae 976|Bacteroidetes O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function radA - - ko:K04485 - - - - ko00000,ko03400 - - - AAA_25,ATPase,ChlI PHJFGMMN_02057 411477.PARMER_02399 1.91e-175 488.0 2ESC2@1|root,33JWV@2|Bacteria,4NXYV@976|Bacteroidetes,2FTKB@200643|Bacteroidia,23171@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02058 411477.PARMER_02400 0.0 1045.0 COG2509@1|root,COG2509@2|Bacteria,4NEUQ@976|Bacteroidetes,2FM1G@200643|Bacteroidia,22XCV@171551|Porphyromonadaceae 976|Bacteroidetes S FAD-binding protein - - - ko:K07137 - - - - ko00000 - - - FAD_binding_2,FAD_binding_3,GIDA,HI0933_like,Pyr_redox_2 PHJFGMMN_02059 411477.PARMER_02401 0.0 2534.0 COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,2FM2N@200643|Bacteroidia,22W84@171551|Porphyromonadaceae 976|Bacteroidetes T histidine kinase DNA gyrase B - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y PHJFGMMN_02060 411477.PARMER_02402 1.73e-296 806.0 2DB8U@1|root,2Z7SW@2|Bacteria,4NEUK@976|Bacteroidetes,2FQCH@200643|Bacteroidia,22Z94@171551|Porphyromonadaceae 976|Bacteroidetes S Alginate lyase - - - - - - - - - - - - Alginate_lyase PHJFGMMN_02061 411477.PARMER_01733 3.9e-260 715.0 COG0582@1|root,COG0582@2|Bacteria,4NDZJ@976|Bacteroidetes,2FM4Q@200643|Bacteroidia,22WPV@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_02062 470145.BACCOP_02889 1.3e-288 788.0 COG3385@1|root,COG3385@2|Bacteria,4NX1P@976|Bacteroidetes,2FPSY@200643|Bacteroidia,4AQCN@815|Bacteroidaceae 976|Bacteroidetes L COG COG3385 FOG Transposase and inactivated derivatives - - - - - - - - - - - - DDE_5,DDE_Tnp_1 PHJFGMMN_02064 1131812.JQMS01000001_gene2253 4.14e-64 206.0 COG1360@1|root,COG1360@2|Bacteria,4PNRP@976|Bacteroidetes,1I9PR@117743|Flavobacteriia 976|Bacteroidetes N OmpA family - - - - - - - - - - - - OmpA PHJFGMMN_02065 1122931.AUAE01000025_gene1584 2.21e-108 335.0 COG0811@1|root,COG0811@2|Bacteria,4NYCK@976|Bacteroidetes 976|Bacteroidetes U peptide transport - - - - - - - - - - - - MotA_ExbB PHJFGMMN_02067 445970.ALIPUT_01187 1.34e-263 725.0 COG0582@1|root,COG0582@2|Bacteria,4NI5P@976|Bacteroidetes,2G04I@200643|Bacteroidia,22VTI@171550|Rikenellaceae 976|Bacteroidetes L Phage integrase SAM-like domain - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_02068 445970.ALIPUT_01188 1.44e-94 276.0 2DUA4@1|root,33PKD@2|Bacteria,4P0ZB@976|Bacteroidetes,2G2G1@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_02069 226186.BT_4018 5.91e-89 263.0 2DC41@1|root,2ZCTI@2|Bacteria,4NQ4V@976|Bacteroidetes,2FSCF@200643|Bacteroidia,4AVZ1@815|Bacteroidaceae 976|Bacteroidetes S Protein of unknown function (DUF3408) - - - - - - - - - - - - DUF3408 PHJFGMMN_02070 762968.HMPREF9441_03732 1.74e-68 207.0 COG0789@1|root,COG0789@2|Bacteria,4NSUY@976|Bacteroidetes,2FT8V@200643|Bacteroidia 976|Bacteroidetes K COG NOG34759 non supervised orthologous group - - - - - - - - - - - - HTH_17 PHJFGMMN_02071 457424.BFAG_01172 1.9e-62 191.0 2DQYP@1|root,339EX@2|Bacteria,4NWWZ@976|Bacteroidetes,2FT6P@200643|Bacteroidia,4ARIP@815|Bacteroidaceae 976|Bacteroidetes S DNA binding domain, excisionase family - - - - - - - - - - - - HTH_17 PHJFGMMN_02072 435591.BDI_0743 9.54e-85 249.0 COG3943@1|root,COG3943@2|Bacteria,4NWZ9@976|Bacteroidetes,2FSGW@200643|Bacteroidia,22YZ4@171551|Porphyromonadaceae 976|Bacteroidetes S COG3943, virulence protein - - - - - - - - - - - - - PHJFGMMN_02073 435591.BDI_0742 7.64e-291 794.0 COG0582@1|root,COG0582@2|Bacteria,4PKX8@976|Bacteroidetes,2G07I@200643|Bacteroidia,231CG@171551|Porphyromonadaceae 976|Bacteroidetes L Arm DNA-binding domain - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_02074 226186.BT_4022 1.89e-294 803.0 COG4974@1|root,COG4974@2|Bacteria,4PKFN@976|Bacteroidetes,2FMCG@200643|Bacteroidia,4ANFI@815|Bacteroidaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_02075 226186.BT_4023 2.03e-47 156.0 COG4974@1|root,COG4974@2|Bacteria,4PIT4@976|Bacteroidetes,2FYJ8@200643|Bacteroidia,4AUGS@815|Bacteroidaceae 976|Bacteroidetes L Phage integrase family - - - - - - - - - - - - Phage_integrase PHJFGMMN_02076 411477.PARMER_01732 1.66e-110 317.0 2F0I6@1|root,33TKW@2|Bacteria,4P257@976|Bacteroidetes,2FRUQ@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02077 1121098.HMPREF1534_03644 1.33e-28 102.0 2FG66@1|root,3482M@2|Bacteria,4P6FM@976|Bacteroidetes,2FURG@200643|Bacteroidia,4ASD8@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02078 1121098.HMPREF1534_03643 1.26e-148 417.0 COG0454@1|root,COG0454@2|Bacteria,4NPC8@976|Bacteroidetes,2FR43@200643|Bacteroidia,4ANMC@815|Bacteroidaceae 976|Bacteroidetes K Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_02079 226186.BT_1133 2.9e-134 380.0 COG1595@1|root,COG1595@2|Bacteria,4NTTR@976|Bacteroidetes,2FNHN@200643|Bacteroidia,4APT6@815|Bacteroidaceae 976|Bacteroidetes K Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_02080 1121098.HMPREF1534_03641 2.79e-89 261.0 2C603@1|root,3310V@2|Bacteria,4NWY2@976|Bacteroidetes,2FS09@200643|Bacteroidia,4AQVK@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02081 1121098.HMPREF1534_03640 3.6e-67 204.0 2DVM5@1|root,33WBN@2|Bacteria,4P37Q@976|Bacteroidetes,2FSVP@200643|Bacteroidia,4AQZ6@815|Bacteroidaceae 976|Bacteroidetes S MerR HTH family regulatory protein - - - - - - - - - - - - HTH_17 PHJFGMMN_02082 226186.BT_1129 2.47e-68 206.0 COG0789@1|root,COG0789@2|Bacteria,4NSUY@976|Bacteroidetes,2FT8V@200643|Bacteroidia,4ARB0@815|Bacteroidaceae 976|Bacteroidetes K COG NOG34759 non supervised orthologous group - - - - - - - - - - - - HTH_17 PHJFGMMN_02083 411477.PARMER_04465 9.24e-109 313.0 2DMKQ@1|root,32S8K@2|Bacteria,4NTNQ@976|Bacteroidetes,2FRHC@200643|Bacteroidia,231QD@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3408) - - - - - - - - - - - - DUF3408 PHJFGMMN_02084 1121098.HMPREF1534_03637 4.06e-81 240.0 2E51N@1|root,32VIN@2|Bacteria,4NSRP@976|Bacteroidetes,2FSCY@200643|Bacteroidia,4AQF5@815|Bacteroidaceae 976|Bacteroidetes S Bacterial mobilisation protein (MobC) - - - - - - - - - - - - MobC PHJFGMMN_02085 484018.BACPLE_02776 1.63e-218 603.0 COG3843@1|root,COG3843@2|Bacteria,4NH77@976|Bacteroidetes,2FM27@200643|Bacteroidia,4AKS5@815|Bacteroidaceae 976|Bacteroidetes U Relaxase mobilization nuclease domain protein - - - - - - - - - - - - Relaxase PHJFGMMN_02086 1121098.HMPREF1534_03635 1.18e-173 485.0 2DUMP@1|root,33RAQ@2|Bacteria,4P0F9@976|Bacteroidetes,2FR87@200643|Bacteroidia,4AKAT@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score - - - - - - - - - - - - - PHJFGMMN_02087 1121098.HMPREF1534_03634 4.1e-222 612.0 COG0582@1|root,COG0582@2|Bacteria,4NI5P@976|Bacteroidetes,2G04I@200643|Bacteroidia,4AN43@815|Bacteroidaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_02088 1121098.HMPREF1534_03633 3.27e-227 625.0 COG2207@1|root,COG2207@2|Bacteria,4NDYY@976|Bacteroidetes,2FNFA@200643|Bacteroidia,4AM1W@815|Bacteroidaceae 976|Bacteroidetes K transcriptional regulator (AraC family) - - - - - - - - - - - - HTH_18 PHJFGMMN_02089 1121098.HMPREF1534_03632 1.24e-280 766.0 COG2706@1|root,COG2706@2|Bacteria,4NE87@976|Bacteroidetes,2FMKW@200643|Bacteroidia,4AK8R@815|Bacteroidaceae 976|Bacteroidetes G COG2706 3-carboxymuconate cyclase pgl - 3.1.1.31 ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 M00004,M00006,M00008 R02035 RC00537 ko00000,ko00001,ko00002,ko01000 - - - Lactonase PHJFGMMN_02090 411477.PARMER_04456 0.0 1041.0 COG0599@1|root,COG1073@1|root,COG0599@2|Bacteria,COG1073@2|Bacteria,4NFJZ@976|Bacteroidetes,2FMNP@200643|Bacteroidia,22W0J@171551|Porphyromonadaceae 976|Bacteroidetes S COG COG1073 Hydrolases of the alpha beta superfamily - - - ko:K06889 - - - - ko00000 - - - CMD,DLH,Peptidase_S15 PHJFGMMN_02091 411477.PARMER_04453 3.2e-31 108.0 2FI20@1|root,349UW@2|Bacteria,4P68C@976|Bacteroidetes,2FVTS@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02092 411477.PARMER_04452 0.0 1794.0 COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_02093 1121098.HMPREF1534_03629 0.0 1097.0 COG0446@1|root,COG0446@2|Bacteria,4P0D3@976|Bacteroidetes,2G059@200643|Bacteroidia,4AWEK@815|Bacteroidaceae 976|Bacteroidetes P SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_02094 1121098.HMPREF1534_03628 2.54e-144 406.0 COG0664@1|root,COG0664@2|Bacteria,4PIYG@976|Bacteroidetes,2FP3R@200643|Bacteroidia,4AN3F@815|Bacteroidaceae 976|Bacteroidetes T Cyclic nucleotide-binding domain - - - - - - - - - - - - cNMP_binding PHJFGMMN_02096 1121098.HMPREF1534_03627 7.96e-127 361.0 COG1661@1|root,COG1661@2|Bacteria,4NQI9@976|Bacteroidetes,2FN87@200643|Bacteroidia,4AQ4U@815|Bacteroidaceae 976|Bacteroidetes S Domain of unknown function (DUF296) - - - ko:K06934 - - - - ko00000 - - - DUF296 PHJFGMMN_02097 1121098.HMPREF1534_03626 3.76e-289 788.0 COG0667@1|root,COG0667@2|Bacteria,4NEB0@976|Bacteroidetes,2FMYE@200643|Bacteroidia,4AKB2@815|Bacteroidaceae 976|Bacteroidetes C aldo keto reductase - - - - - - - - - - - - Aldo_ket_red,TAT_signal PHJFGMMN_02098 1121098.HMPREF1534_03625 1.29e-263 720.0 COG1075@1|root,COG1075@2|Bacteria,4NFSV@976|Bacteroidetes,2FNWB@200643|Bacteroidia,4AQB4@815|Bacteroidaceae 976|Bacteroidetes S Alpha beta hydrolase - - - - - - - - - - - - Abhydrolase_6 PHJFGMMN_02099 1121098.HMPREF1534_03624 2.05e-126 359.0 COG0716@1|root,COG0716@2|Bacteria,4NNTA@976|Bacteroidetes,2FST2@200643|Bacteroidia,4AQ9R@815|Bacteroidaceae 976|Bacteroidetes C Flavodoxin - - - - - - - - - - - - Flavodoxin_4 PHJFGMMN_02100 1121098.HMPREF1534_03623 6.61e-100 289.0 COG0582@1|root,COG0582@2|Bacteria,4NZT1@976|Bacteroidetes,2FQKG@200643|Bacteroidia,4AK77@815|Bacteroidaceae 976|Bacteroidetes L viral genome integration into host DNA - - - - - - - - - - - - - PHJFGMMN_02101 1121098.HMPREF1534_03622 6.16e-21 82.4 COG0582@1|root,COG0582@2|Bacteria,4P74I@976|Bacteroidetes,2FUM2@200643|Bacteroidia,4ASFP@815|Bacteroidaceae 976|Bacteroidetes L viral genome integration into host DNA - - - - - - - - - - - - - PHJFGMMN_02102 1121098.HMPREF1534_03621 5.22e-102 295.0 COG1528@1|root,COG1528@2|Bacteria,4P23Y@976|Bacteroidetes,2FQ9S@200643|Bacteroidia,4AN42@815|Bacteroidaceae 976|Bacteroidetes P Iron-storage protein - - 1.16.3.2 ko:K02217 - - - - ko00000,ko01000 - - - Ferritin PHJFGMMN_02103 1121098.HMPREF1534_03620 8.36e-146 411.0 COG2095@1|root,COG2095@2|Bacteria,4NIHF@976|Bacteroidetes,2FMIJ@200643|Bacteroidia,4AP4I@815|Bacteroidaceae 976|Bacteroidetes U UPF0056 membrane protein - - - ko:K05595 - - - - ko00000,ko02000 2.A.95.1 - - MarC PHJFGMMN_02104 1121098.HMPREF1534_03619 7.1e-111 318.0 COG1528@1|root,COG1528@2|Bacteria,4NGS7@976|Bacteroidetes,2FQD1@200643|Bacteroidia,4AP5J@815|Bacteroidaceae 976|Bacteroidetes P Iron-storage protein ftnA - 1.16.3.2 ko:K02217 - - - - ko00000,ko01000 - - - Ferritin PHJFGMMN_02105 1121098.HMPREF1534_03618 1.9e-259 710.0 COG1830@1|root,COG1830@2|Bacteria,4NEUM@976|Bacteroidetes,2FKZ7@200643|Bacteroidia,4APQV@815|Bacteroidaceae 976|Bacteroidetes G COG COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes fbaB - 4.1.2.13 ko:K11645 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003 R01068,R01070,R01829,R02568 RC00438,RC00439,RC00603,RC00604 ko00000,ko00001,ko00002,ko01000 - - - DeoC PHJFGMMN_02106 1121098.HMPREF1534_03617 2.23e-185 514.0 COG0588@1|root,COG0588@2|Bacteria,4NFP5@976|Bacteroidetes,2FP93@200643|Bacteroidia,4AMX8@815|Bacteroidaceae 976|Bacteroidetes G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate gpmA GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - His_Phos_1 PHJFGMMN_02107 1121098.HMPREF1534_03616 1.82e-93 273.0 COG0071@1|root,COG0071@2|Bacteria,4NQXY@976|Bacteroidetes,2FS35@200643|Bacteroidia,4AQMP@815|Bacteroidaceae 976|Bacteroidetes O Belongs to the small heat shock protein (HSP20) family hsp20 - - ko:K13993 ko04141,map04141 - - - ko00000,ko00001,ko03110 - - - HSP20 PHJFGMMN_02108 1121098.HMPREF1534_03615 4.04e-108 311.0 COG1595@1|root,COG1595@2|Bacteria,4P0UC@976|Bacteroidetes,2FQUB@200643|Bacteroidia,4AMUC@815|Bacteroidaceae 976|Bacteroidetes K Sigma-70 region 2 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2 PHJFGMMN_02109 1121098.HMPREF1534_03614 2.22e-231 637.0 COG0205@1|root,COG0205@2|Bacteria,4NF8F@976|Bacteroidetes,2FMPI@200643|Bacteroidia,4AMX3@815|Bacteroidaceae 976|Bacteroidetes F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis pfkA - 2.7.1.11 ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 M00001,M00345 R00756,R03236,R03237,R03238,R03239,R04779 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 - - - PFK PHJFGMMN_02110 411477.PARMER_04427 0.0 1391.0 COG0475@1|root,COG0490@1|root,COG0569@1|root,COG0475@2|Bacteria,COG0490@2|Bacteria,COG0569@2|Bacteria,4NGF6@976|Bacteroidetes,2FNTX@200643|Bacteroidia,22WU6@171551|Porphyromonadaceae 976|Bacteroidetes P COG0475 Kef-type K transport systems, membrane components - - - ko:K03455 - - - - ko00000 2.A.37 - - Na_H_Exchanger,TrkA_C PHJFGMMN_02111 1121098.HMPREF1534_03612 0.0 1773.0 COG0058@1|root,COG0058@2|Bacteria,4NGR1@976|Bacteroidetes,2FQ21@200643|Bacteroidia,4AMWE@815|Bacteroidaceae 976|Bacteroidetes G Protein of unknown function (DUF3417) glgP - 2.4.1.1,2.4.1.11,2.4.1.8 ko:K00688,ko:K00691,ko:K16153 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 - R00292,R01555,R02111 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003 - GH65,GT3,GT35 - DUF3417,Glycogen_syn,Phosphorylase PHJFGMMN_02112 226186.BT_1099 2.25e-204 564.0 COG0010@1|root,COG0010@2|Bacteria,4NNRC@976|Bacteroidetes,2FPDH@200643|Bacteroidia,4AMRH@815|Bacteroidaceae 976|Bacteroidetes E Belongs to the arginase family - - - - - - - - - - - - Arginase PHJFGMMN_02113 1121098.HMPREF1534_03610 1.39e-128 365.0 COG1803@1|root,COG1803@2|Bacteria,4NQJ9@976|Bacteroidetes,2FPT5@200643|Bacteroidia,4ANEX@815|Bacteroidaceae 976|Bacteroidetes G methylglyoxal synthase mgsA - 4.2.3.3 ko:K01734 ko00640,ko01120,map00640,map01120 - R01016 RC00424 ko00000,ko00001,ko01000 - - - MGS PHJFGMMN_02115 1121098.HMPREF1534_03608 7.14e-17 71.6 28WP8@1|root,2ZINY@2|Bacteria,4P8X7@976|Bacteroidetes,2FVY3@200643|Bacteroidia,4AUPI@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02116 411477.PARMER_04419 1.88e-47 151.0 COG0789@1|root,COG0789@2|Bacteria,4NSUY@976|Bacteroidetes,2FT8V@200643|Bacteroidia,230Z1@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_17 PHJFGMMN_02117 226186.BT_1097 7.04e-57 176.0 2DHT6@1|root,300UM@2|Bacteria,4PJZQ@976|Bacteroidetes,2FTJF@200643|Bacteroidia,4ARKF@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02118 1121098.HMPREF1534_03606 1.15e-113 325.0 2B9V1@1|root,32380@2|Bacteria,4PMV9@976|Bacteroidetes,2FPR7@200643|Bacteroidia,4AKVW@815|Bacteroidaceae 976|Bacteroidetes S DDE superfamily endonuclease - - - - - - - - - - - - DDE_Tnp_4 PHJFGMMN_02119 1121098.HMPREF1534_03605 1.04e-69 210.0 2DM3N@1|root,31K1C@2|Bacteria,4NRD4@976|Bacteroidetes,2FSID@200643|Bacteroidia,4AR4U@815|Bacteroidaceae 976|Bacteroidetes S Helix-turn-helix domain - - - - - - - - - - - - HTH_17 PHJFGMMN_02120 411477.PARMER_02404 0.0 2023.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia,231P8@171551|Porphyromonadaceae 976|Bacteroidetes P CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_02121 411477.PARMER_02405 0.0 1001.0 COG0702@1|root,COG0702@2|Bacteria,4NKQ1@976|Bacteroidetes,2FR0T@200643|Bacteroidia,230DG@171551|Porphyromonadaceae 976|Bacteroidetes GM SusD family - - - - - - - - - - - - SusD-like_3,SusD_RagB PHJFGMMN_02122 411477.PARMER_02406 5.49e-307 835.0 COG4225@1|root,COG4225@2|Bacteria,4NDYS@976|Bacteroidetes,2FM61@200643|Bacteroidia,22XA8@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl Hydrolase Family 88 - - - - - - - - - - - - Glyco_hydro_88 PHJFGMMN_02123 411477.PARMER_02407 0.0 1708.0 COG3250@1|root,COG3250@2|Bacteria,4NEDF@976|Bacteroidetes,2FNNU@200643|Bacteroidia,22ZW0@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF4982) lacZ_2 - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N PHJFGMMN_02124 411477.PARMER_02408 7.09e-273 748.0 COG2233@1|root,COG2233@2|Bacteria,4NE5A@976|Bacteroidetes,2FPX6@200643|Bacteroidia,22WTV@171551|Porphyromonadaceae 976|Bacteroidetes F Uracil transporter pyrP - - ko:K02824 - - - - ko00000,ko02000 2.A.40.1.1,2.A.40.1.2 - - Xan_ur_permease PHJFGMMN_02125 411477.PARMER_02409 0.0 932.0 COG3842@1|root,COG3842@2|Bacteria,4NEZ6@976|Bacteroidetes,2G2SA@200643|Bacteroidia,231YA@171551|Porphyromonadaceae 976|Bacteroidetes P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system potA - 3.6.3.29,3.6.3.30,3.6.3.31 ko:K02010,ko:K02017,ko:K10112,ko:K11072 ko02010,map02010 M00189,M00190,M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00299,M00491,M00602,M00605,M00606 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.1,3.A.1.10,3.A.1.11.1,3.A.1.8 - - ABC_tran,TOBE_2 PHJFGMMN_02126 411477.PARMER_02410 4.62e-182 507.0 COG1176@1|root,COG1176@2|Bacteria,4P0H6@976|Bacteroidetes,2FN37@200643|Bacteroidia,2301G@171551|Porphyromonadaceae 976|Bacteroidetes P Binding-protein-dependent transport system inner membrane component - - - ko:K11071 ko02010,map02010 M00299 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11.1 - - BPD_transp_1 PHJFGMMN_02127 411477.PARMER_02411 2.35e-173 485.0 COG1177@1|root,COG1177@2|Bacteria,4PKVT@976|Bacteroidetes,2FNE3@200643|Bacteroidia,22Z8C@171551|Porphyromonadaceae 976|Bacteroidetes P Binding-protein-dependent transport system inner membrane component ydcV - - ko:K11070 ko02010,map02010 M00299 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11.1 - - BPD_transp_1 PHJFGMMN_02128 411477.PARMER_02412 0.0 892.0 COG0687@1|root,COG0687@2|Bacteria,4NHNY@976|Bacteroidetes,2FNDI@200643|Bacteroidia,22ZDA@171551|Porphyromonadaceae 976|Bacteroidetes P Bacterial extracellular solute-binding protein potD - - ko:K11069 ko02010,map02010 M00299 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11.1 - - SBP_bac_8 PHJFGMMN_02129 411477.PARMER_02413 5.74e-155 434.0 COG1011@1|root,COG1011@2|Bacteria,4NQT8@976|Bacteroidetes,2FMXN@200643|Bacteroidia,22YFI@171551|Porphyromonadaceae 976|Bacteroidetes S Haloacid dehalogenase-like hydrolase yihX - 3.1.3.10 ko:K07025,ko:K20866 ko00010,ko01120,map00010,map01120 - R00947 RC00078 ko00000,ko00001,ko01000 - - - HAD_2 PHJFGMMN_02130 411477.PARMER_02415 7.66e-153 430.0 COG1738@1|root,COG1738@2|Bacteria,4NFP3@976|Bacteroidetes,2FM04@200643|Bacteroidia,22X5J@171551|Porphyromonadaceae 976|Bacteroidetes U Involved in the import of queuosine (Q) precursors, required for Q precursor salvage yhhQ - - ko:K09125 - - - - ko00000 - - - Vut_1 PHJFGMMN_02131 411477.PARMER_02417 0.0 981.0 COG0038@1|root,COG0038@2|Bacteria,4NFCF@976|Bacteroidetes,2FP79@200643|Bacteroidia,22W38@171551|Porphyromonadaceae 976|Bacteroidetes P Voltage gated chloride channel - - - ko:K03281 - - - - ko00000 2.A.49 - - TrkA_C,Voltage_CLC PHJFGMMN_02132 411477.PARMER_02419 5.92e-219 603.0 2C23X@1|root,31B63@2|Bacteria,4NS2W@976|Bacteroidetes,2FT67@200643|Bacteroidia,22YVH@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02134 411477.PARMER_02418 6.38e-233 639.0 COG3828@1|root,COG3828@2|Bacteria,4NFMU@976|Bacteroidetes,2FN9Z@200643|Bacteroidia 976|Bacteroidetes S Trehalose utilisation - - - - - - - - - - - - ThuA PHJFGMMN_02135 411477.PARMER_02420 5.56e-218 602.0 COG0031@1|root,COG0031@2|Bacteria,4NDZ9@976|Bacteroidetes,2FME4@200643|Bacteroidia,22WCJ@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the cysteine synthase cystathionine beta- synthase family cysK - 2.5.1.47 ko:K01738,ko:K12339 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 M00021 R00897,R03132,R03601,R04859 RC00020,RC02814,RC02821,RC02876 ko00000,ko00001,ko00002,ko01000 - - - PALP PHJFGMMN_02136 411477.PARMER_02421 1.62e-279 763.0 COG1169@1|root,COG1169@2|Bacteria,4NF6U@976|Bacteroidetes,2FNBU@200643|Bacteroidia,22XSX@171551|Porphyromonadaceae 976|Bacteroidetes HQ Isochorismate synthase entC - 5.4.4.2 ko:K02361,ko:K02552 ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130 M00116 R01717 RC00588 ko00000,ko00001,ko00002,ko01000 - - - Chorismate_bind PHJFGMMN_02137 411477.PARMER_02422 1.83e-297 811.0 COG0561@1|root,COG2050@1|root,COG0561@2|Bacteria,COG2050@2|Bacteria,4NNYG@976|Bacteroidetes,2FPKD@200643|Bacteroidia,22XIM@171551|Porphyromonadaceae 976|Bacteroidetes Q Thioesterase superfamily ydiI - 3.1.2.28 ko:K19222 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R07262 RC00004,RC00174 ko00000,ko00001,ko00002,ko01000 - - - 4HBT,Hydrolase_3 PHJFGMMN_02138 411477.PARMER_02423 0.0 1280.0 COG0507@1|root,COG1112@1|root,COG0507@2|Bacteria,COG1112@2|Bacteria,4NEK7@976|Bacteroidetes,2FM7P@200643|Bacteroidia,22WIF@171551|Porphyromonadaceae 976|Bacteroidetes L AAA domain - - - - - - - - - - - - AAA_11,AAA_12 PHJFGMMN_02139 411477.PARMER_02424 1.63e-118 343.0 COG4520@1|root,COG4520@2|Bacteria 2|Bacteria - - MA20_07440 - - - - - - - - - - - 17kDa_Anti_2 PHJFGMMN_02140 411477.PARMER_02425 1.61e-54 171.0 2FC16@1|root,34459@2|Bacteria,4P52Z@976|Bacteroidetes,2FURX@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02142 411477.PARMER_02427 3.32e-301 822.0 COG3681@1|root,COG3681@2|Bacteria,4NHRU@976|Bacteroidetes,2FNP9@200643|Bacteroidia,22WFW@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the UPF0597 family - - - - - - - - - - - - SDH_alpha PHJFGMMN_02143 411477.PARMER_02428 8.79e-264 721.0 COG3214@1|root,COG3214@2|Bacteria,4NGF2@976|Bacteroidetes,2FP5R@200643|Bacteroidia,22WBM@171551|Porphyromonadaceae 976|Bacteroidetes S Winged helix DNA-binding domain - - - - - - - - - - - - HTH_42 PHJFGMMN_02144 411477.PARMER_02429 1.37e-220 608.0 COG0598@1|root,COG0598@2|Bacteria,4NGM7@976|Bacteroidetes,2FNKU@200643|Bacteroidia,22WPX@171551|Porphyromonadaceae 976|Bacteroidetes P Transporter corA - - ko:K03284 - - - - ko00000,ko02000 1.A.35.1,1.A.35.3 - - CorA PHJFGMMN_02145 411477.PARMER_02430 2.88e-306 837.0 COG0534@1|root,COG0534@2|Bacteria,4NKRF@976|Bacteroidetes,2G335@200643|Bacteroidia,231ZT@171551|Porphyromonadaceae 976|Bacteroidetes V Polysaccharide biosynthesis C-terminal domain - - - - - - - - - - - - MatE PHJFGMMN_02146 411477.PARMER_02431 4.66e-231 635.0 COG4552@1|root,COG4552@2|Bacteria,4NP1R@976|Bacteroidetes,2FPE0@200643|Bacteroidia,22XV1@171551|Porphyromonadaceae 976|Bacteroidetes S Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_9,SCP2_2 PHJFGMMN_02147 411477.PARMER_02432 3.26e-225 619.0 COG4866@1|root,COG4866@2|Bacteria,4NGJE@976|Bacteroidetes,2FNB2@200643|Bacteroidia,22VZB@171551|Porphyromonadaceae 976|Bacteroidetes S Uncharacterised conserved protein (DUF2156) - - - ko:K01163 - - - - ko00000 - - - Acetyltransf_9,DUF2156 PHJFGMMN_02148 411477.PARMER_02433 1.2e-201 558.0 COG2207@1|root,COG2207@2|Bacteria 2|Bacteria K Transcriptional regulator - - - - - - - - - - - - HTH_18 PHJFGMMN_02149 411477.PARMER_02434 8.44e-200 553.0 COG2207@1|root,COG2207@2|Bacteria,4NIW3@976|Bacteroidetes,2FKZW@200643|Bacteroidia,22ZQ0@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_18 PHJFGMMN_02150 411477.PARMER_02435 0.0 1130.0 COG0845@1|root,COG2608@1|root,COG0845@2|Bacteria,COG2608@2|Bacteria,4NG8S@976|Bacteroidetes,2FMQN@200643|Bacteroidia,22X6K@171551|Porphyromonadaceae 976|Bacteroidetes MP Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K07798 ko02020,map02020 - - - ko00000,ko00001,ko02000 2.A.6.1.4,8.A.1 - - DUF3347,HMA,HlyD_D23 PHJFGMMN_02151 411477.PARMER_02437 2.15e-263 724.0 COG1538@1|root,COG1538@2|Bacteria,4NDXW@976|Bacteroidetes,2FN4C@200643|Bacteroidia,22XHC@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP PHJFGMMN_02152 411477.PARMER_02440 2.4e-297 811.0 COG0582@1|root,COG0582@2|Bacteria,4NHD7@976|Bacteroidetes,2FR6Y@200643|Bacteroidia,22W47@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_02153 1392486.JIAF01000004_gene2244 9.2e-23 95.1 COG4974@1|root,COG4974@2|Bacteria,4NI5V@976|Bacteroidetes,2FNCQ@200643|Bacteroidia 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_02154 411477.PARMER_02443 1.08e-218 603.0 COG0582@1|root,COG0582@2|Bacteria,4PKF7@976|Bacteroidetes,2G3F0@200643|Bacteroidia,23224@171551|Porphyromonadaceae 976|Bacteroidetes L Phage integrase family - - - - - - - - - - - - Phage_integrase PHJFGMMN_02155 411477.PARMER_02444 2.22e-130 369.0 COG4283@1|root,COG4283@2|Bacteria,4NNFT@976|Bacteroidetes,2FP89@200643|Bacteroidia,22ZJP@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1706) - - - - - - - - - - - - DUF1706 PHJFGMMN_02156 411477.PARMER_02445 1.39e-81 241.0 COG0346@1|root,COG0346@2|Bacteria,4NPQX@976|Bacteroidetes,2FTJR@200643|Bacteroidia,22Y4D@171551|Porphyromonadaceae 976|Bacteroidetes E Glyoxalase-like domain - - - ko:K11210 - - - - ko00000,ko01000 - - - DUF2867,Glyoxalase PHJFGMMN_02157 411477.PARMER_02446 5.92e-65 199.0 2DH26@1|root,2ZY4Z@2|Bacteria,4P4RC@976|Bacteroidetes,2FTB5@200643|Bacteroidia 976|Bacteroidetes S Protein of unknown function (DUF3795) - - - - - - - - - - - - DUF3795 PHJFGMMN_02158 411477.PARMER_02447 1.32e-141 399.0 COG1670@1|root,COG1670@2|Bacteria,4NP3T@976|Bacteroidetes,2G2SE@200643|Bacteroidia,22Y3C@171551|Porphyromonadaceae 976|Bacteroidetes J Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_1,Acetyltransf_3 PHJFGMMN_02159 411477.PARMER_02448 1.83e-96 280.0 COG0346@1|root,COG0346@2|Bacteria,4NN6H@976|Bacteroidetes,2FSEA@200643|Bacteroidia,22XTM@171551|Porphyromonadaceae 976|Bacteroidetes E Glyoxalase - - - ko:K07032 - - - - ko00000 - - - Glyoxalase PHJFGMMN_02160 411477.PARMER_02449 2.12e-63 193.0 2ADIQ@1|root,31392@2|Bacteria,4NQ64@976|Bacteroidetes,2FT5Q@200643|Bacteroidia,22YFE@171551|Porphyromonadaceae 976|Bacteroidetes S Transcriptional regulator - - - - - - - - - - - - HTH_17 PHJFGMMN_02161 411477.PARMER_02450 1.28e-60 187.0 COG0789@1|root,COG0789@2|Bacteria,4NREF@976|Bacteroidetes,2FTGY@200643|Bacteroidia,22YRB@171551|Porphyromonadaceae 976|Bacteroidetes K Multidrug DMT transporter permease - - - - - - - - - - - - HTH_17 PHJFGMMN_02162 411477.PARMER_02453 2.22e-229 631.0 COG0358@1|root,COG0358@2|Bacteria,4NIEM@976|Bacteroidetes,2FP7D@200643|Bacteroidia,22XQU@171551|Porphyromonadaceae 976|Bacteroidetes L Toprim-like - - - - - - - - - - - - Toprim_2,zf-CHC2 PHJFGMMN_02164 411477.PARMER_02454 5.43e-294 803.0 COG1196@1|root,COG1196@2|Bacteria,4PKFQ@976|Bacteroidetes,2G3FJ@200643|Bacteroidia,22ZTT@171551|Porphyromonadaceae 976|Bacteroidetes D Plasmid recombination enzyme - - - - - - - - - - - - Mob_Pre PHJFGMMN_02165 411477.PARMER_02456 1.37e-218 603.0 2AXZN@1|root,31Q17@2|Bacteria,4NQRZ@976|Bacteroidetes,2FX4I@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF1837) - - - - - - - - - - - - DUF1837 PHJFGMMN_02166 411477.PARMER_02457 0.0 1457.0 COG4581@1|root,COG4581@2|Bacteria,4PMUY@976|Bacteroidetes,2G0HB@200643|Bacteroidia 976|Bacteroidetes L helicase superfamily c-terminal domain - - - - - - - - - - - - Helicase_C,ResIII PHJFGMMN_02167 411477.PARMER_02458 0.0 1820.0 COG3696@1|root,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,2FQUJ@200643|Bacteroidia,22VWA@171551|Porphyromonadaceae 976|Bacteroidetes P AcrB/AcrD/AcrF family - - - ko:K07787,ko:K15726 ko02020,map02020 - - - ko00000,ko00001,ko02000 2.A.6.1.2,2.A.6.1.4 - - ACR_tran PHJFGMMN_02168 411477.PARMER_02459 3.43e-188 522.0 COG3696@1|root,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,2FQUJ@200643|Bacteroidia,22VWA@171551|Porphyromonadaceae 976|Bacteroidetes P AcrB/AcrD/AcrF family - - - ko:K07787,ko:K15726 ko02020,map02020 - - - ko00000,ko00001,ko02000 2.A.6.1.2,2.A.6.1.4 - - ACR_tran PHJFGMMN_02169 411477.PARMER_02460 1.26e-139 394.0 COG1961@1|root,COG1961@2|Bacteria,4NJM8@976|Bacteroidetes,2FMQS@200643|Bacteroidia,22XYK@171551|Porphyromonadaceae 976|Bacteroidetes L Resolvase, N terminal domain - - - - - - - - - - - - HTH_7,Resolvase PHJFGMMN_02170 411477.PARMER_02461 2.91e-255 700.0 COG0598@1|root,COG0598@2|Bacteria,4NG3C@976|Bacteroidetes,2FPIV@200643|Bacteroidia,22XS7@171551|Porphyromonadaceae 976|Bacteroidetes P Mediates influx of magnesium ions corA - - ko:K03284 - - - - ko00000,ko02000 1.A.35.1,1.A.35.3 - - CorA PHJFGMMN_02171 411477.PARMER_02462 0.0 1571.0 COG1193@1|root,COG1193@2|Bacteria,4NFE6@976|Bacteroidetes,2FMKP@200643|Bacteroidia,22X9R@171551|Porphyromonadaceae 976|Bacteroidetes L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity mutS2 - - ko:K07456 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - MutS_V,Smr PHJFGMMN_02172 411477.PARMER_02463 0.0 984.0 COG0793@1|root,COG0793@2|Bacteria,4NJ73@976|Bacteroidetes,2FR31@200643|Bacteroidia,22XBG@171551|Porphyromonadaceae 976|Bacteroidetes M PDZ DHR GLGF domain protein - - - - - - - - - - - - DUF4136,PDZ,PDZ_2 PHJFGMMN_02173 411477.PARMER_02464 1.19e-130 372.0 COG0576@1|root,COG0576@2|Bacteria,4NQ6M@976|Bacteroidetes,2FPIN@200643|Bacteroidia,22Y59@171551|Porphyromonadaceae 976|Bacteroidetes O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ grpE GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - ko:K03687 - - - - ko00000,ko03029,ko03110 - - - GrpE PHJFGMMN_02174 411477.PARMER_02465 4.78e-253 697.0 COG0484@1|root,COG0484@2|Bacteria,4NF41@976|Bacteroidetes,2FPHH@200643|Bacteroidia,22WBJ@171551|Porphyromonadaceae 976|Bacteroidetes O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins dnaJ - - ko:K03686 - - - - ko00000,ko03029,ko03110 - - - DnaJ,DnaJ_C,DnaJ_CXXCXGXG PHJFGMMN_02175 411477.PARMER_02468 0.0 1059.0 COG0488@1|root,COG0488@2|Bacteria,4NF6E@976|Bacteroidetes,2FNX4@200643|Bacteroidia,22WZS@171551|Porphyromonadaceae 976|Bacteroidetes S ATPases associated with a variety of cellular activities - - - - - - - - - - - - ABC_tran PHJFGMMN_02176 411477.PARMER_02469 4.09e-250 685.0 COG5504@1|root,COG5504@2|Bacteria,4NFZP@976|Bacteroidetes,2FMM9@200643|Bacteroidia,22XXR@171551|Porphyromonadaceae 976|Bacteroidetes O Psort location Cytoplasmic, score 8.96 gldB - - - - - - - - - - - - PHJFGMMN_02177 411477.PARMER_02470 5.18e-299 817.0 COG0534@1|root,COG0534@2|Bacteria,4NFIR@976|Bacteroidetes,2FMSA@200643|Bacteroidia,22X5G@171551|Porphyromonadaceae 976|Bacteroidetes V COG0534 Na -driven multidrug efflux pump - - - - - - - - - - - - MatE PHJFGMMN_02178 411477.PARMER_02471 4.82e-277 756.0 COG0470@1|root,COG0470@2|Bacteria,4NEYF@976|Bacteroidetes,2FPCQ@200643|Bacteroidia,22VVP@171551|Porphyromonadaceae 976|Bacteroidetes L DNA polymerase III holB - 2.7.7.7 ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta2 PHJFGMMN_02180 411477.PARMER_02475 1.82e-256 702.0 COG0252@1|root,COG0252@2|Bacteria,4NE2Z@976|Bacteroidetes,2FM3E@200643|Bacteroidia,22VV2@171551|Porphyromonadaceae 976|Bacteroidetes EJ L-asparaginase, type I ansA - 3.5.1.1 ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 - R00485 RC00010,RC02798 ko00000,ko00001,ko01000 - - - Asparaginase PHJFGMMN_02181 411477.PARMER_02476 1.4e-233 642.0 COG0685@1|root,COG0685@2|Bacteria,4NDY0@976|Bacteroidetes,2FMPC@200643|Bacteroidia,22X3N@171551|Porphyromonadaceae 976|Bacteroidetes C Methylenetetrahydrofolate reductase metF - 1.5.1.20 ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 M00377 R01224,R07168 RC00081 ko00000,ko00001,ko00002,ko01000 - - - MTHFR PHJFGMMN_02182 411477.PARMER_02478 3.65e-252 691.0 COG0115@1|root,COG0115@2|Bacteria,4NEJY@976|Bacteroidetes,2FMPE@200643|Bacteroidia,22XCN@171551|Porphyromonadaceae 976|Bacteroidetes EH Branched-chain amino acid aminotransferase ilvE - 2.6.1.42 ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00036,M00119,M00570 R01090,R01214,R02199,R10991 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_4 PHJFGMMN_02183 999419.HMPREF1077_02569 2.02e-276 756.0 COG1373@1|root,COG1373@2|Bacteria,4NE3E@976|Bacteroidetes,2FQ28@200643|Bacteroidia,22W5Q@171551|Porphyromonadaceae 976|Bacteroidetes S ATPase (AAA - - - ko:K07133 - - - - ko00000 - - - AAA_14 PHJFGMMN_02184 411477.PARMER_02481 0.0 2375.0 COG0674@1|root,COG1013@1|root,COG1014@1|root,COG1143@1|root,COG0674@2|Bacteria,COG1013@2|Bacteria,COG1014@2|Bacteria,COG1143@2|Bacteria,4NF4F@976|Bacteroidetes,2FKZU@200643|Bacteroidia,22WF0@171551|Porphyromonadaceae 976|Bacteroidetes C Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin nifJ - 1.2.7.1 ko:K03737 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00173,M00307 R01196,R10866 RC00004,RC02742 br01601,ko00000,ko00001,ko00002,ko01000 - - - EKR,Fer4_16,Fer4_7,PFOR_II,POR,POR_N,TPP_enzyme_C PHJFGMMN_02185 411477.PARMER_02483 9.77e-152 427.0 COG3294@1|root,COG3294@2|Bacteria,4NJAE@976|Bacteroidetes,2FNKA@200643|Bacteroidia,22WQF@171551|Porphyromonadaceae 976|Bacteroidetes S Metal dependent phosphohydrolases with conserved 'HD' motif. - - - - - - - - - - - - HD PHJFGMMN_02186 411477.PARMER_02484 5.89e-258 706.0 2DWGN@1|root,3408J@2|Bacteria,4P42X@976|Bacteroidetes,2FYH1@200643|Bacteroidia,2316Z@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - DUF4852 PHJFGMMN_02187 411477.PARMER_02486 1.27e-292 797.0 COG3637@1|root,COG3637@2|Bacteria,4NGSV@976|Bacteroidetes,2FQ5B@200643|Bacteroidia,22ZMW@171551|Porphyromonadaceae 976|Bacteroidetes M Phosphate-selective porin O and P - - - - - - - - - - - - Porin_O_P PHJFGMMN_02188 411477.PARMER_02487 1.98e-188 523.0 COG0561@1|root,COG0561@2|Bacteria,4NEG2@976|Bacteroidetes,2FMS2@200643|Bacteroidia,22WX9@171551|Porphyromonadaceae 976|Bacteroidetes S Sucrose-6F-phosphate phosphohydrolase - - - - - - - - - - - - Hydrolase_3 PHJFGMMN_02189 411477.PARMER_02489 1.1e-126 360.0 COG0288@1|root,COG0288@2|Bacteria,4NW0D@976|Bacteroidetes,2FPAT@200643|Bacteroidia,230GS@171551|Porphyromonadaceae 976|Bacteroidetes P Reversible hydration of carbon dioxide cah - 4.2.1.1 ko:K01673 ko00910,map00910 - R00132,R10092 RC02807 ko00000,ko00001,ko01000 - - - Pro_CA PHJFGMMN_02191 411477.PARMER_02491 3e-252 690.0 COG2234@1|root,COG2234@2|Bacteria,4NFDJ@976|Bacteroidetes,2FQ2M@200643|Bacteroidia,22XAT@171551|Porphyromonadaceae 976|Bacteroidetes S Peptidase family M28 - - - - - - - - - - - - Peptidase_M28 PHJFGMMN_02192 411477.PARMER_02493 0.0 1216.0 COG0457@1|root,COG0457@2|Bacteria,4NDX0@976|Bacteroidetes,2FM6J@200643|Bacteroidia 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_02193 999419.HMPREF1077_02579 0.0 1726.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_02195 1122931.AUAE01000014_gene1963 1.35e-23 102.0 COG0457@1|root,COG0457@2|Bacteria,4NG3F@976|Bacteroidetes,2FM0I@200643|Bacteroidia,22XFW@171551|Porphyromonadaceae 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_02196 411477.PARMER_02500 0.0 2101.0 COG4206@1|root,COG4206@2|Bacteria,4NZWU@976|Bacteroidetes,2G065@200643|Bacteroidia,22WB2@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_02197 999419.HMPREF1077_02583 0.0 1285.0 2DBCI@1|root,2Z8DZ@2|Bacteria,4NF4Y@976|Bacteroidetes,2FQEW@200643|Bacteroidia,22WNQ@171551|Porphyromonadaceae 976|Bacteroidetes S Susd and RagB outer membrane lipoprotein - - - - - - - - - - - - SusD-like PHJFGMMN_02198 411477.PARMER_02503 9.15e-207 572.0 COG0331@1|root,COG0331@2|Bacteria,4NE1D@976|Bacteroidetes,2FM9P@200643|Bacteroidia,22W12@171551|Porphyromonadaceae 976|Bacteroidetes I malonyl CoA-acyl carrier protein transacylase fabD - 2.3.1.39 ko:K00645 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 M00082 R01626,R11671 RC00004,RC00039,RC02727 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyl_transf_1 PHJFGMMN_02199 411477.PARMER_02504 1.64e-35 120.0 COG1826@1|root,COG1826@2|Bacteria,4NUNH@976|Bacteroidetes,2FUQY@200643|Bacteroidia,22YQS@171551|Porphyromonadaceae 976|Bacteroidetes U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system tatA - - ko:K03116 ko03060,ko03070,map03060,map03070 M00336 - - ko00000,ko00001,ko00002,ko02044 2.A.64 - - MttA_Hcf106 PHJFGMMN_02200 411477.PARMER_02506 2.55e-212 586.0 COG0805@1|root,COG0805@2|Bacteria,4NEKM@976|Bacteroidetes,2FNUF@200643|Bacteroidia,22WUU@171551|Porphyromonadaceae 976|Bacteroidetes U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes tatC - - ko:K03118 ko03060,ko03070,map03060,map03070 M00336 - - ko00000,ko00001,ko00002,ko02044 2.A.64 - - TatC PHJFGMMN_02201 411477.PARMER_02507 0.0 1553.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMQ9@200643|Bacteroidia,22W30@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 PHJFGMMN_02202 999419.HMPREF1077_02588 0.0 877.0 COG1541@1|root,COG1541@2|Bacteria,4NGRR@976|Bacteroidetes,2FNC4@200643|Bacteroidia,22XDE@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) - - 6.2.1.30 ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 - R02539 RC00004,RC00014 ko00000,ko00001,ko01000 - - - AMP-binding,AMP-binding_C_2 PHJFGMMN_02203 411477.PARMER_02511 1.69e-93 273.0 COG4747@1|root,COG4747@2|Bacteria,4NQIW@976|Bacteroidetes,2FS2U@200643|Bacteroidia,22YBG@171551|Porphyromonadaceae 976|Bacteroidetes S ACT domain protein - - - - - - - - - - - - ACT PHJFGMMN_02204 411477.PARMER_02512 1.33e-187 521.0 COG4105@1|root,COG4105@2|Bacteria,4NJ5A@976|Bacteroidetes,2FNAY@200643|Bacteroidia,22WG7@171551|Porphyromonadaceae 976|Bacteroidetes S outer membrane assembly lipoprotein YfiO yfiO - - ko:K05807 - - - - ko00000,ko02000 1.B.33.1 - - YfiO PHJFGMMN_02205 411477.PARMER_02513 4.29e-70 211.0 2CT4B@1|root,32SSJ@2|Bacteria,4NQ76@976|Bacteroidetes,2FTC9@200643|Bacteroidia,22Y4I@171551|Porphyromonadaceae 976|Bacteroidetes S Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits rpoZ - - - - - - - - - - - RNA_pol_Rpb6 PHJFGMMN_02206 411477.PARMER_02514 1.24e-94 277.0 2E8SV@1|root,3333M@2|Bacteria,4NSHV@976|Bacteroidetes,2FV1F@200643|Bacteroidia,22YEX@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4293) - - - - - - - - - - - - DUF4293 PHJFGMMN_02207 411477.PARMER_02515 6.66e-159 445.0 COG3637@1|root,COG3637@2|Bacteria,4NQBX@976|Bacteroidetes,2G3BC@200643|Bacteroidia,22Y6M@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl_2 PHJFGMMN_02208 999419.HMPREF1077_02595 0.0 1164.0 COG0683@1|root,COG1388@1|root,COG0683@2|Bacteria,COG1388@2|Bacteria,4NG96@976|Bacteroidetes,2FNR1@200643|Bacteroidia,22WGX@171551|Porphyromonadaceae 976|Bacteroidetes M Lysin motif lysM - - - - - - - - - - - ANF_receptor,LysM,Peripla_BP_6 PHJFGMMN_02209 411477.PARMER_02518 0.0 1140.0 COG0514@1|root,COG0514@2|Bacteria,4NEFD@976|Bacteroidetes,2FMT4@200643|Bacteroidia,22VWK@171551|Porphyromonadaceae 976|Bacteroidetes L ATP-dependent DNA helicase RecQ recQ2 - 3.6.4.12 ko:K03654 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,RecQ_Zn_bind PHJFGMMN_02210 411477.PARMER_02519 0.0 1140.0 COG0608@1|root,COG0608@2|Bacteria,4NDW1@976|Bacteroidetes,2FMH0@200643|Bacteroidia,22WD4@171551|Porphyromonadaceae 976|Bacteroidetes L single-stranded-DNA-specific exonuclease RecJ recJ - - ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DHH,DHHA1 PHJFGMMN_02211 411477.PARMER_02521 5.77e-264 723.0 29TTU@1|root,30F26@2|Bacteria,4NPF7@976|Bacteroidetes,2FU2G@200643|Bacteroidia,230PJ@171551|Porphyromonadaceae 976|Bacteroidetes S PD-(D/E)XK nuclease superfamily - - - - - - - - - - - - PDDEXK_4 PHJFGMMN_02214 411477.PARMER_02524 1.45e-122 350.0 COG0009@1|root,COG0009@2|Bacteria,4NM43@976|Bacteroidetes,2FPW5@200643|Bacteroidia,22XN8@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the SUA5 family rimN - 2.7.7.87 ko:K07566 - - R10463 RC00745 ko00000,ko01000,ko03009,ko03016 - - - Sua5_yciO_yrdC PHJFGMMN_02215 411477.PARMER_02525 0.0 919.0 COG2148@1|root,COG2148@2|Bacteria,4NFIA@976|Bacteroidetes,2FMUQ@200643|Bacteroidia,22XDG@171551|Porphyromonadaceae 976|Bacteroidetes M sugar transferase - - - - - - - - - - - - Bac_transf,CoA_binding_3 PHJFGMMN_02216 411477.PARMER_02526 0.0 1158.0 COG0038@1|root,COG0517@1|root,COG0038@2|Bacteria,COG0517@2|Bacteria,4NFCF@976|Bacteroidetes,2FNDY@200643|Bacteroidia,22VVX@171551|Porphyromonadaceae 976|Bacteroidetes P Chloride channel protein - - - ko:K03281 - - - - ko00000 2.A.49 - - CBS,Voltage_CLC PHJFGMMN_02217 411477.PARMER_02527 4.69e-236 649.0 COG0223@1|root,COG0223@2|Bacteria,4NE8U@976|Bacteroidetes,2FN5I@200643|Bacteroidia,22VZZ@171551|Porphyromonadaceae 976|Bacteroidetes J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus fmt GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 ko:K00604 ko00670,ko00970,map00670,map00970 - R03940 RC00026,RC00165 ko00000,ko00001,ko01000 - - - Formyl_trans_C,Formyl_trans_N PHJFGMMN_02218 411477.PARMER_02528 0.0 1905.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FNAJ@200643|Bacteroidia,22WW7@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family bpeF - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran PHJFGMMN_02219 411477.PARMER_02529 2.23e-260 714.0 COG0845@1|root,COG0845@2|Bacteria,4NHV2@976|Bacteroidetes,2FPPF@200643|Bacteroidia,22WZX@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - HlyD_D23 PHJFGMMN_02220 411477.PARMER_02530 0.0 919.0 COG1538@1|root,COG1538@2|Bacteria,4NG1P@976|Bacteroidetes,2FMQB@200643|Bacteroidia,22WV8@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane efflux protein - - - - - - - - - - - - OEP PHJFGMMN_02221 411477.PARMER_02531 1.37e-95 278.0 COG0545@1|root,COG0545@2|Bacteria,4P3V8@976|Bacteroidetes,2FTBJ@200643|Bacteroidia,230A2@171551|Porphyromonadaceae 976|Bacteroidetes O FKBP-type peptidyl-prolyl cis-trans isomerase mip - 5.2.1.8 ko:K01802 - - - - ko00000,ko01000 - - - FKBP_C PHJFGMMN_02222 999419.HMPREF1077_02609 0.0 954.0 COG0534@1|root,COG0534@2|Bacteria,4NH4G@976|Bacteroidetes,2FQ16@200643|Bacteroidia,22ZJW@171551|Porphyromonadaceae 976|Bacteroidetes V COG0534 Na -driven multidrug efflux pump mepA_7 - - - - - - - - - - - MatE PHJFGMMN_02223 411477.PARMER_02533 0.0 1483.0 COG0280@1|root,COG0281@1|root,COG0280@2|Bacteria,COG0281@2|Bacteria,4NFUJ@976|Bacteroidetes,2FM2T@200643|Bacteroidia,22VZR@171551|Porphyromonadaceae 976|Bacteroidetes C Malic enzyme maeB - 1.1.1.38,1.1.1.40 ko:K00027,ko:K00029 ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020 M00169,M00172 R00214,R00216 RC00105 ko00000,ko00001,ko00002,ko01000 - - - Malic_M,PTA_PTB,malic PHJFGMMN_02224 999419.HMPREF1077_02611 1.32e-63 196.0 2EP0A@1|root,33GM5@2|Bacteria,4NYGM@976|Bacteroidetes,2FUEY@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02226 411477.PARMER_02537 0.0 1551.0 COG1629@1|root,COG4771@2|Bacteria,4NF05@976|Bacteroidetes,2FMJS@200643|Bacteroidia,22X9C@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor - - - ko:K16089 - - - - ko00000,ko02000 1.B.14.1,1.B.14.10 - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_02228 411477.PARMER_02540 1.41e-140 397.0 COG0218@1|root,COG0218@2|Bacteria,4NEA9@976|Bacteroidetes,2FM4M@200643|Bacteroidia,22X2K@171551|Porphyromonadaceae 976|Bacteroidetes D Necessary for normal cell division and for the maintenance of normal septation engB - - ko:K03978 - - - - ko00000,ko03036 - - - MMR_HSR1 PHJFGMMN_02229 411477.PARMER_02541 0.0 939.0 COG0591@1|root,COG0591@2|Bacteria,4NEF3@976|Bacteroidetes,2FM9G@200643|Bacteroidia,22WVH@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - - - - - - - - - - SSF PHJFGMMN_02230 411477.PARMER_04088 0.0 1050.0 COG3666@1|root,COG3666@2|Bacteria,4NEDD@976|Bacteroidetes,2FNIQ@200643|Bacteroidia,22WUY@171551|Porphyromonadaceae 976|Bacteroidetes L COG3666 Transposase and inactivated derivatives - - - - - - - - - - - - DDE_Tnp_1,DDE_Tnp_1_6,DUF772 PHJFGMMN_02231 411477.PARMER_02544 0.0 874.0 COG2385@1|root,COG2385@2|Bacteria,4NG21@976|Bacteroidetes,2FP4W@200643|Bacteroidia,22X5F@171551|Porphyromonadaceae 976|Bacteroidetes D Stage II sporulation protein lytB - - ko:K06381 - - - - ko00000 - - - DUF4922,Glycos_transf_2,SpoIID PHJFGMMN_02232 411477.PARMER_02545 0.0 1238.0 COG1297@1|root,COG1297@2|Bacteria,4NEIY@976|Bacteroidetes,2FN5W@200643|Bacteroidia,22W0A@171551|Porphyromonadaceae 976|Bacteroidetes S Peptide transporter - - - - - - - - - - - - OPT PHJFGMMN_02233 411477.PARMER_02547 3.72e-145 409.0 COG0353@1|root,COG0353@2|Bacteria,4NEWI@976|Bacteroidetes,2FM1C@200643|Bacteroidia,22WED@171551|Porphyromonadaceae 976|Bacteroidetes L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO recR - - ko:K06187 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - RecR,Toprim_4 PHJFGMMN_02234 411477.PARMER_02548 3.05e-281 768.0 COG1216@1|root,COG1216@2|Bacteria,4NFW5@976|Bacteroidetes,2FQ14@200643|Bacteroidia,22X88@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl transferase family group 2 wbbL - - ko:K07011 - - - - ko00000 - - - Glyco_tranf_2_3,Glyco_trans_2_3,Glycos_transf_2 PHJFGMMN_02235 411477.PARMER_02549 1.34e-130 370.0 COG1670@1|root,COG1670@2|Bacteria,4NQ8K@976|Bacteroidetes,2FMII@200643|Bacteroidia,22Y4G@171551|Porphyromonadaceae 976|Bacteroidetes J Acetyltransferase (GNAT) domain speG - 2.3.1.57 ko:K00657 ko00330,ko01100,ko04216,map00330,map01100,map04216 M00135 R01154 RC00004,RC00096 ko00000,ko00001,ko00002,ko01000 - - - Acetyltransf_3 PHJFGMMN_02236 411477.PARMER_02550 9.61e-148 415.0 COG1678@1|root,COG1678@2|Bacteria,4NFQA@976|Bacteroidetes,2FM82@200643|Bacteroidia,22YAY@171551|Porphyromonadaceae 976|Bacteroidetes K Uncharacterized ACR, COG1678 - - - ko:K07735 - - - - ko00000,ko03000 - - - DUF179 PHJFGMMN_02237 411477.PARMER_02551 0.0 878.0 COG0436@1|root,COG0436@2|Bacteria,4NHP7@976|Bacteroidetes,2FN3D@200643|Bacteroidia,22XCE@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase alaC - - - - - - - - - - - Aminotran_1_2 PHJFGMMN_02241 411477.PARMER_02557 3.11e-84 248.0 COG3118@1|root,COG3118@2|Bacteria,4NQNX@976|Bacteroidetes,2FSPP@200643|Bacteroidia,22Y0M@171551|Porphyromonadaceae 976|Bacteroidetes O Thioredoxin - - - - - - - - - - - - Thioredoxin PHJFGMMN_02242 411477.PARMER_02558 3.87e-162 453.0 COG0605@1|root,COG0605@2|Bacteria,4NDZ4@976|Bacteroidetes,2FNA0@200643|Bacteroidia,22W98@171551|Porphyromonadaceae 976|Bacteroidetes C Destroys radicals which are normally produced within the cells and which are toxic to biological systems sodB - 1.15.1.1 ko:K04564 ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016 - - - ko00000,ko00001,ko01000 - - - Sod_Fe_C,Sod_Fe_N PHJFGMMN_02243 411477.PARMER_02559 8.93e-76 227.0 2EBGJ@1|root,335H5@2|Bacteria,4NX87@976|Bacteroidetes,2FTAW@200643|Bacteroidia,230Z8@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02244 411477.PARMER_02560 0.0 1727.0 COG3250@1|root,COG3250@2|Bacteria,4NH5T@976|Bacteroidetes,2FMQ4@200643|Bacteroidia,22WQD@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF5127) - - - - - - - - - - - - DUF1793,DUF4964,DUF4965,DUF5127 PHJFGMMN_02245 411477.PARMER_02561 0.0 1140.0 COG2194@1|root,COG2194@2|Bacteria,4NHJ0@976|Bacteroidetes,2FMY6@200643|Bacteroidia,22WZA@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF1705) eptA - - - - - - - - - - - DUF1705,Sulfatase PHJFGMMN_02246 411477.PARMER_02562 0.0 1561.0 COG0642@1|root,COG0784@1|root,COG2198@1|root,COG0784@2|Bacteria,COG2198@2|Bacteria,COG2205@2|Bacteria,4NFEF@976|Bacteroidetes,2FNF0@200643|Bacteroidia,22WR8@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA,Response_reg PHJFGMMN_02247 411477.PARMER_02564 6.23e-288 785.0 COG2311@1|root,COG2311@2|Bacteria,4NG01@976|Bacteroidetes,2FNJU@200643|Bacteroidia,22W53@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF418) - - - ko:K07148 - - - - ko00000 - - - DUF1624,DUF418 PHJFGMMN_02248 411477.PARMER_02565 0.0 875.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMCJ@200643|Bacteroidia,22X7M@171551|Porphyromonadaceae 976|Bacteroidetes T COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - ko:K07713 ko02020,map02020 M00499 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat PHJFGMMN_02249 411477.PARMER_02566 0.0 1649.0 COG1882@1|root,COG1882@2|Bacteria,4NDWW@976|Bacteroidetes,2FMC2@200643|Bacteroidia,22WNW@171551|Porphyromonadaceae 976|Bacteroidetes C Pyruvate formate lyase-like - - 2.3.1.54,4.1.1.83 ko:K00656,ko:K18427 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 - R00212,R06987 RC00004,RC01181,RC02742,RC02833 ko00000,ko00001,ko01000 - - - Gly_radical,PFL-like PHJFGMMN_02250 411477.PARMER_02568 1.16e-213 590.0 COG1180@1|root,COG1180@2|Bacteria,4NIUZ@976|Bacteroidetes,2FP2R@200643|Bacteroidia,22XIT@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S single cluster domain - - 1.97.1.4 ko:K04069 - - R04710 - ko00000,ko01000 - - - Fer4,Fer4_12,Radical_SAM PHJFGMMN_02251 411477.PARMER_02570 0.0 1093.0 COG2985@1|root,COG2985@2|Bacteria,4NHM3@976|Bacteroidetes,2FQ85@200643|Bacteroidia,22X4N@171551|Porphyromonadaceae 976|Bacteroidetes S Predicted Permease Membrane Region aspT - - ko:K07085 - - - - ko00000 2.A.81 - - Asp-Al_Ex,TrkA_C PHJFGMMN_02252 411477.PARMER_02571 0.0 1111.0 COG0436@1|root,COG0436@2|Bacteria,4NH2Y@976|Bacteroidetes,2FPZN@200643|Bacteroidia,22X90@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase class I and II aspD - 4.1.1.12 ko:K09758 ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230 - R00397,R00863 RC00282,RC00399,RC00400 ko00000,ko00001,ko01000 - - - Aminotran_1_2 PHJFGMMN_02253 411477.PARMER_02572 0.0 1489.0 COG1048@1|root,COG1048@2|Bacteria,4NDZT@976|Bacteroidetes,2FMDQ@200643|Bacteroidia,22XBN@171551|Porphyromonadaceae 976|Bacteroidetes C aconitate hydratase acnA - 4.2.1.3 ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00173,M00740 R01324,R01325,R01900 RC00497,RC00498,RC00618 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase,Aconitase_C PHJFGMMN_02254 411477.PARMER_02573 5.34e-306 833.0 COG0538@1|root,COG0538@2|Bacteria,4PKW6@976|Bacteroidetes,2FKYF@200643|Bacteroidia,22WNM@171551|Porphyromonadaceae 976|Bacteroidetes C Isocitrate/isopropylmalate dehydrogenase icd - 1.1.1.42 ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 M00009,M00010,M00173,M00740 R00267,R00268,R01899 RC00001,RC00084,RC00114,RC00626,RC02801 br01601,ko00000,ko00001,ko00002,ko01000 - - - Iso_dh PHJFGMMN_02255 411477.PARMER_02574 0.0 886.0 COG0372@1|root,COG0372@2|Bacteria,4NFXK@976|Bacteroidetes,2FPF3@200643|Bacteroidia,22VZ6@171551|Porphyromonadaceae 976|Bacteroidetes C Citrate synthase, C-terminal domain prpC - 2.3.3.1,2.3.3.5 ko:K01647,ko:K01659 ko00020,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00740 R00351,R00931 RC00004,RC00067,RC00406,RC02827 br01601,ko00000,ko00001,ko00002,ko01000 - - - Citrate_synt PHJFGMMN_02257 411477.PARMER_02576 1.54e-35 120.0 2EG1V@1|root,339TV@2|Bacteria,4NX9J@976|Bacteroidetes,2FUKH@200643|Bacteroidia,22YXD@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4250) - - - - - - - - - - - - DUF4250 PHJFGMMN_02258 411477.PARMER_02577 3.57e-74 222.0 2ET8R@1|root,33KST@2|Bacteria,4NYBM@976|Bacteroidetes,2FVFI@200643|Bacteroidia,231AH@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02259 411477.PARMER_02579 6.71e-203 560.0 COG0627@1|root,COG0627@2|Bacteria,4NE7D@976|Bacteroidetes,2FM9S@200643|Bacteroidia,22W0W@171551|Porphyromonadaceae 976|Bacteroidetes S Putative esterase - - 3.1.2.12 ko:K01070 ko00680,ko01120,ko01200,map00680,map01120,map01200 - R00527 RC00167,RC00320 ko00000,ko00001,ko01000 - CE1 - Esterase PHJFGMMN_02260 411477.PARMER_02580 0.0 1088.0 COG2759@1|root,COG2759@2|Bacteria,4NG3E@976|Bacteroidetes,2FMAE@200643|Bacteroidia,22XGR@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the formate--tetrahydrofolate ligase family fhs - 6.3.4.3 ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R00943 RC00026,RC00111 ko00000,ko00001,ko00002,ko01000 - - - FTHFS PHJFGMMN_02261 411477.PARMER_02582 2.05e-162 456.0 COG2243@1|root,COG2243@2|Bacteria,4NMRW@976|Bacteroidetes,2FNTI@200643|Bacteroidia,22XNP@171551|Porphyromonadaceae 976|Bacteroidetes H Precorrin-2 C20-methyltransferase - - 2.1.1.130,2.1.1.151 ko:K03394 ko00860,ko01100,map00860,map01100 - R03948,R05808 RC00003,RC01035,RC01662 ko00000,ko00001,ko01000 - - - TP_methylase PHJFGMMN_02263 999419.HMPREF1077_03055 8.1e-282 769.0 COG0614@1|root,COG0614@2|Bacteria,4NH9F@976|Bacteroidetes,2FMDS@200643|Bacteroidia,22WR0@171551|Porphyromonadaceae 976|Bacteroidetes P Periplasmic binding protein - - - ko:K02016 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - Peripla_BP_2 PHJFGMMN_02264 999419.HMPREF1077_03054 5.54e-225 622.0 COG0609@1|root,COG0609@2|Bacteria,4NEDU@976|Bacteroidetes,2FNDK@200643|Bacteroidia,22WJI@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily - - - ko:K02015 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - FecCD PHJFGMMN_02265 411477.PARMER_02586 4.54e-240 660.0 COG1120@1|root,COG1120@2|Bacteria,4NG1Q@976|Bacteroidetes,2FMCI@200643|Bacteroidia,22XBW@171551|Porphyromonadaceae 976|Bacteroidetes HP ABC transporter, ATP-binding protein fhuC - 3.6.3.34 ko:K02013 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.14 - - ABC_tran PHJFGMMN_02266 1235803.C825_05149 1.9e-84 257.0 28UV9@1|root,2ZGZ9@2|Bacteria,4P8CI@976|Bacteroidetes,2FZ67@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02267 411477.PARMER_02588 0.0 1199.0 COG1903@1|root,COG2099@1|root,COG1903@2|Bacteria,COG2099@2|Bacteria,4NE1Z@976|Bacteroidetes,2FMIX@200643|Bacteroidia,22WKH@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A cbiD - 2.1.1.195 ko:K02188 ko00860,ko01100,map00860,map01100 - R07773 RC00003,RC02051 ko00000,ko00001,ko01000 - - - CbiD,CbiJ PHJFGMMN_02268 411477.PARMER_02589 0.0 1277.0 COG2073@1|root,COG2875@1|root,COG2073@2|Bacteria,COG2875@2|Bacteria,4PKDZ@976|Bacteroidetes,2FNMI@200643|Bacteroidia,22W86@171551|Porphyromonadaceae 976|Bacteroidetes H Cobalamin biosynthesis protein CbiG cobM - 2.1.1.133,2.1.1.271 ko:K05936 ko00860,ko01100,map00860,map01100 - R05181,R05810 RC00003,RC01294,RC02049 ko00000,ko00001,ko01000 - - - CbiG_C,CbiG_N,CbiG_mid,TP_methylase PHJFGMMN_02269 411477.PARMER_02590 4.97e-311 846.0 COG2241@1|root,COG2242@1|root,COG2241@2|Bacteria,COG2242@2|Bacteria,4NFV9@976|Bacteroidetes,2FMN0@200643|Bacteroidia,22WEE@171551|Porphyromonadaceae 976|Bacteroidetes H Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit cbiE - 2.1.1.132 ko:K00595 ko00860,ko01100,map00860,map01100 - R05149 RC00003,RC01279 ko00000,ko00001,ko01000 - - - Methyltransf_2,TP_methylase PHJFGMMN_02270 411477.PARMER_02591 0.0 930.0 COG1010@1|root,COG2082@1|root,COG1010@2|Bacteria,COG2082@2|Bacteria,4NIR7@976|Bacteroidetes,2FP3F@200643|Bacteroidia,22WHE@171551|Porphyromonadaceae 976|Bacteroidetes H Precorrin-3B C(17)-methyltransferase cobJ - 5.4.99.60,5.4.99.61 ko:K06042 ko00860,ko01100,map00860,map01100 - R05177,R05814 RC01292,RC01980 ko00000,ko00001,ko01000 - - - CbiC,TP_methylase PHJFGMMN_02271 411477.PARMER_02592 0.0 1117.0 COG1022@1|root,COG1022@2|Bacteria,4NGFQ@976|Bacteroidetes,2FN1X@200643|Bacteroidia,22WYK@171551|Porphyromonadaceae 976|Bacteroidetes I AMP-binding enzyme - - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding PHJFGMMN_02272 411477.PARMER_02594 5.5e-161 450.0 COG3507@1|root,COG3507@2|Bacteria 2|Bacteria G Belongs to the glycosyl hydrolase 43 family - - - - - - - - - - - - DUF1080 PHJFGMMN_02273 411477.PARMER_02595 0.0 1092.0 COG0488@1|root,COG0488@2|Bacteria,4NES5@976|Bacteroidetes,2FNIS@200643|Bacteroidia,22X8D@171551|Porphyromonadaceae 976|Bacteroidetes S ATP-binding cassette protein, ChvD family - - - - - - - - - - - - ABC_tran,ABC_tran_Xtn PHJFGMMN_02274 585543.HMPREF0969_01114 0.000493 44.3 2EYUQ@1|root,33S1W@2|Bacteria,4P01W@976|Bacteroidetes,2FM25@200643|Bacteroidia,4APKT@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02275 411477.PARMER_02597 1.4e-289 792.0 COG0534@1|root,COG0534@2|Bacteria,4NFIR@976|Bacteroidetes,2FMSA@200643|Bacteroidia,22X9K@171551|Porphyromonadaceae 976|Bacteroidetes V COG0534 Na -driven multidrug efflux pump - - - - - - - - - - - - MatE PHJFGMMN_02276 411477.PARMER_02598 1.16e-70 212.0 COG0454@1|root,COG0456@2|Bacteria,4NTRS@976|Bacteroidetes,2FS7C@200643|Bacteroidia,230ZH@171551|Porphyromonadaceae 976|Bacteroidetes K acetyltransferase - - - - - - - - - - - - DinB_2 PHJFGMMN_02277 411477.PARMER_02601 1.5e-71 218.0 COG2207@1|root,COG2207@2|Bacteria,4PIWQ@976|Bacteroidetes,2FZ8D@200643|Bacteroidia 976|Bacteroidetes K Bacterial regulatory helix-turn-helix proteins, AraC family - - - - - - - - - - - - - PHJFGMMN_02278 411477.PARMER_02602 7.72e-165 461.0 COG3973@1|root,COG3973@2|Bacteria,4NITV@976|Bacteroidetes,2FPMX@200643|Bacteroidia,22Z8T@171551|Porphyromonadaceae 976|Bacteroidetes L COG COG3973 Superfamily I DNA and RNA helicases helD - 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - AAA_19,UvrD-helicase,UvrD_C PHJFGMMN_02279 411477.PARMER_02603 3.27e-170 475.0 COG3973@1|root,COG3973@2|Bacteria,4NITV@976|Bacteroidetes,2FPMX@200643|Bacteroidia,22Z8T@171551|Porphyromonadaceae 976|Bacteroidetes L COG COG3973 Superfamily I DNA and RNA helicases helD - 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - AAA_19,UvrD-helicase,UvrD_C PHJFGMMN_02280 411477.PARMER_02605 5.09e-78 232.0 COG3973@1|root,COG3973@2|Bacteria,4NITV@976|Bacteroidetes,2FPMX@200643|Bacteroidia,22Z8T@171551|Porphyromonadaceae 976|Bacteroidetes L COG COG3973 Superfamily I DNA and RNA helicases helD - 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - AAA_19,UvrD-helicase,UvrD_C,UvrD_C_2 PHJFGMMN_02281 411477.PARMER_02606 1.21e-142 402.0 28PMV@1|root,2ZCAQ@2|Bacteria,4NMJQ@976|Bacteroidetes,2FM59@200643|Bacteroidia,22ZZ5@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG23385 non supervised orthologous group - - - - - - - - - - - - NTP_transf_2 PHJFGMMN_02282 411477.PARMER_02607 8.64e-84 248.0 COG2197@1|root,COG2197@2|Bacteria,4NR5M@976|Bacteroidetes,2FQRF@200643|Bacteroidia 976|Bacteroidetes K COG NOG38984 non supervised orthologous group - - - - - - - - - - - - GerE,PAS_3 PHJFGMMN_02283 411477.PARMER_02609 2.66e-72 216.0 COG2197@1|root,COG2197@2|Bacteria,4NR5M@976|Bacteroidetes,2FQRF@200643|Bacteroidia 976|Bacteroidetes K COG NOG38984 non supervised orthologous group - - - - - - - - - - - - GerE,PAS_3 PHJFGMMN_02284 1122931.AUAE01000001_gene502 2.95e-18 77.4 COG0789@1|root,COG0789@2|Bacteria,4NPZ2@976|Bacteroidetes,2FSGQ@200643|Bacteroidia,230UH@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_17 PHJFGMMN_02285 411477.PARMER_02612 1.8e-64 197.0 2C174@1|root,32R87@2|Bacteria,4NS22@976|Bacteroidetes,2FT7J@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function, B. Theta Gene description (DUF3876) - - - - - - - - - - - - DUF3876 PHJFGMMN_02286 1268240.ATFI01000004_gene4350 5.02e-33 115.0 2DVGB@1|root,33VRV@2|Bacteria,4P3BN@976|Bacteroidetes,2FTB9@200643|Bacteroidia,4ARBY@815|Bacteroidaceae 976|Bacteroidetes S MerR HTH family regulatory protein - - - - - - - - - - - - HTH_17 PHJFGMMN_02288 411477.PARMER_02617 7.43e-256 701.0 COG4974@1|root,COG4974@2|Bacteria,4PKFN@976|Bacteroidetes,2FMCG@200643|Bacteroidia,22WVQ@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_02289 411477.PARMER_02619 4.45e-294 802.0 COG4974@1|root,COG4974@2|Bacteria,4P01T@976|Bacteroidetes,2FNQ0@200643|Bacteroidia,22WIY@171551|Porphyromonadaceae 976|Bacteroidetes L COG NOG11942 non supervised orthologous group - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_02290 411477.PARMER_02621 7.75e-126 358.0 COG0250@1|root,COG0250@2|Bacteria,4NUFS@976|Bacteroidetes,2FPHC@200643|Bacteroidia,22YAT@171551|Porphyromonadaceae 976|Bacteroidetes K Transcription termination factor nusG - - - - - - - - - - - - NusG PHJFGMMN_02291 411477.PARMER_02622 5.4e-273 747.0 COG0472@1|root,COG0472@2|Bacteria,4NGKM@976|Bacteroidetes,2FM86@200643|Bacteroidia,22W3P@171551|Porphyromonadaceae 976|Bacteroidetes M UDP-N-acetylmuramyl pentapeptide phosphotransferase wecA - - - - - - - - - - - Glycos_transf_4 PHJFGMMN_02292 411477.PARMER_02623 7.71e-185 514.0 COG1596@1|root,COG1596@2|Bacteria,4NNJT@976|Bacteroidetes,2FMYU@200643|Bacteroidia,22WFJ@171551|Porphyromonadaceae 976|Bacteroidetes M BexD CtrA VexA family polysaccharide export protein - - - ko:K01991 ko02026,map02026 - - - ko00000,ko00001,ko02000 1.B.18 - - Poly_export,SLBB PHJFGMMN_02293 411477.PARMER_02624 0.0 1488.0 COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,4NEXU@976|Bacteroidetes,2FM9K@200643|Bacteroidia,22X1F@171551|Porphyromonadaceae 976|Bacteroidetes DM Chain length determinant protein - - - - - - - - - - - - AAA_31,CbiA,GNVR,Wzz PHJFGMMN_02294 411477.PARMER_02625 9.3e-176 489.0 COG4464@1|root,COG4464@2|Bacteria,4NMUT@976|Bacteroidetes,2FNRW@200643|Bacteroidia,22ZP9@171551|Porphyromonadaceae 976|Bacteroidetes GM COG COG4464 Capsular polysaccharide biosynthesis protein - - - - - - - - - - - - - PHJFGMMN_02295 411477.PARMER_02626 0.0 1004.0 COG2244@1|root,COG2244@2|Bacteria,4NHVU@976|Bacteroidetes,2FNNQ@200643|Bacteroidia,22WE1@171551|Porphyromonadaceae 976|Bacteroidetes U Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - PHJFGMMN_02296 411477.PARMER_02627 4.62e-223 614.0 COG0778@1|root,COG0778@2|Bacteria 2|Bacteria C coenzyme F420-1:gamma-L-glutamate ligase activity - - - - - - - - - - - - Nitroreductase PHJFGMMN_02297 411477.PARMER_02628 4.16e-299 815.0 COG2327@1|root,COG2327@2|Bacteria,4PECT@976|Bacteroidetes,2FWAD@200643|Bacteroidia 976|Bacteroidetes S Polysaccharide pyruvyl transferase - - - - - - - - - - - - PS_pyruv_trans PHJFGMMN_02298 411477.PARMER_02629 1.5e-279 763.0 COG0381@1|root,COG0381@2|Bacteria,4NGBD@976|Bacteroidetes,2FM5D@200643|Bacteroidia,22W64@171551|Porphyromonadaceae 976|Bacteroidetes G UDP-N-acetylglucosamine 2-epimerase - - 5.1.3.14 ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 M00362 R00420 RC00290 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Epimerase_2 PHJFGMMN_02299 411477.PARMER_02630 4.02e-304 828.0 COG0438@1|root,COG0438@2|Bacteria,4NE6S@976|Bacteroidetes,2FS76@200643|Bacteroidia,22XPD@171551|Porphyromonadaceae 976|Bacteroidetes M glycosyl transferase - - - - - - - - - - - - Glyco_trans_1_4,Glyco_transf_4 PHJFGMMN_02301 411477.PARMER_02632 9.43e-171 477.0 COG3274@1|root,COG3274@2|Bacteria,4NW0Q@976|Bacteroidetes,2FVBV@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - Acyl_transf_3 PHJFGMMN_02302 411477.PARMER_02633 2.24e-184 511.0 COG2120@1|root,COG2120@2|Bacteria,4NP5K@976|Bacteroidetes,2FS9F@200643|Bacteroidia 976|Bacteroidetes S GlcNAc-PI de-N-acetylase - - - - - - - - - - - - NodS,PIG-L PHJFGMMN_02303 411477.PARMER_02634 4.78e-273 746.0 COG3919@1|root,COG3919@2|Bacteria 2|Bacteria E ATP-grasp - - 6.3.1.12 ko:K17810 - - - - ko00000,ko01000 - - - ATP-grasp_3 PHJFGMMN_02304 411477.PARMER_02635 9.85e-236 647.0 COG1215@1|root,COG1215@2|Bacteria,4NFJ0@976|Bacteroidetes,2G05H@200643|Bacteroidia,231PA@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase like family 2 - - - - - - - - - - - - Glycos_transf_2 PHJFGMMN_02307 411477.PARMER_02638 3.07e-256 703.0 COG0438@1|root,COG0438@2|Bacteria,4NWSJ@976|Bacteroidetes,2FPNG@200643|Bacteroidia,22XJ8@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 PHJFGMMN_02308 411477.PARMER_02639 2.85e-316 861.0 2E873@1|root,332KB@2|Bacteria,4NW1H@976|Bacteroidetes,2FPIW@200643|Bacteroidia,22YT0@171551|Porphyromonadaceae 976|Bacteroidetes S O-Antigen ligase - - - - - - - - - - - - Wzy_C PHJFGMMN_02309 411477.PARMER_02640 9.52e-240 658.0 COG1215@1|root,COG1215@2|Bacteria,4NIMF@976|Bacteroidetes,2FRUS@200643|Bacteroidia,22YJS@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase like family 2 - - - - - - - - - - - - Glycos_transf_2 PHJFGMMN_02311 411477.PARMER_02642 1.02e-164 460.0 COG0110@1|root,COG0110@2|Bacteria,4NT38@976|Bacteroidetes,2G329@200643|Bacteroidia 976|Bacteroidetes S maltose O-acetyltransferase activity - - - - - - - - - - - - Hexapep PHJFGMMN_02312 411477.PARMER_02643 8.73e-282 769.0 COG0438@1|root,COG0438@2|Bacteria,4NGSA@976|Bacteroidetes,2FPXN@200643|Bacteroidia,231JM@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1 PHJFGMMN_02315 411477.PARMER_02646 2.51e-190 527.0 COG1922@1|root,COG1922@2|Bacteria,4NHZY@976|Bacteroidetes,2G2SR@200643|Bacteroidia,22XZF@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferase WecB/TagA/CpsF family - - 2.4.1.187 ko:K05946 ko05111,map05111 - - - ko00000,ko00001,ko01000,ko01003 - GT26 - Glyco_tran_WecB PHJFGMMN_02316 411477.PARMER_02647 8.23e-272 742.0 COG1089@1|root,COG1089@2|Bacteria,4NEB6@976|Bacteroidetes,2FMUP@200643|Bacteroidia,22X5T@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose gmd - 4.2.1.47 ko:K01711 ko00051,ko00520,ko01100,map00051,map00520,map01100 - R00888 RC00402 ko00000,ko00001,ko01000 - - - GDP_Man_Dehyd PHJFGMMN_02317 411477.PARMER_02648 3.99e-232 638.0 COG0451@1|root,COG0451@2|Bacteria,4NDV4@976|Bacteroidetes,2FNA5@200643|Bacteroidia,22W0D@171551|Porphyromonadaceae 976|Bacteroidetes GM Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction fcl - 1.1.1.271 ko:K02377 ko00051,ko00520,ko01100,map00051,map00520,map01100 - R05692 RC01014 ko00000,ko00001,ko01000 - - - Epimerase PHJFGMMN_02318 411477.PARMER_02650 0.0 899.0 COG0662@1|root,COG0836@1|root,COG0662@2|Bacteria,COG0836@2|Bacteria,4NE1Y@976|Bacteroidetes,2FNHF@200643|Bacteroidia,22X4P@171551|Porphyromonadaceae 976|Bacteroidetes M mannose-1-phosphate guanylyltransferase - - 2.7.7.13 ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 M00114,M00361,M00362 R00885 RC00002 ko00000,ko00001,ko00002,ko01000 - - - MannoseP_isomer,NTP_transferase PHJFGMMN_02319 411477.PARMER_02652 0.0 1546.0 COG1061@1|root,COG1061@2|Bacteria,4NU9U@976|Bacteroidetes,2FR0U@200643|Bacteroidia,23176@171551|Porphyromonadaceae 976|Bacteroidetes L Helicase associated domain - - - - - - - - - - - - HA,Helicase_C,ResIII PHJFGMMN_02320 411477.PARMER_01148 5.34e-289 796.0 COG3328@1|root,COG3328@2|Bacteria,4NFQS@976|Bacteroidetes,2FM5A@200643|Bacteroidia,22YJ0@171551|Porphyromonadaceae 976|Bacteroidetes L COG COG3328 Transposase and inactivated derivatives - - - - - - - - - - - - Transposase_mut PHJFGMMN_02321 411477.PARMER_04286 1.73e-63 194.0 2DVVT@1|root,33XE9@2|Bacteria,4P38C@976|Bacteroidetes,2G05Y@200643|Bacteroidia 976|Bacteroidetes L Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - HTH_17 PHJFGMMN_02322 411477.PARMER_04287 9.71e-54 167.0 2F6PB@1|root,33Z5S@2|Bacteria,4P4AE@976|Bacteroidetes,2FUFF@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02323 411477.PARMER_04288 2.91e-227 625.0 2A9IV@1|root,30YR7@2|Bacteria,4NKTW@976|Bacteroidetes,2FQH6@200643|Bacteroidia 976|Bacteroidetes S Putative amidoligase enzyme - - - - - - - - - - - - Amidoligase_2 PHJFGMMN_02324 411477.PARMER_04294 4.13e-227 624.0 COG2207@1|root,COG2207@2|Bacteria,4NDYY@976|Bacteroidetes,2FNFA@200643|Bacteroidia,22WH9@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator - - - - - - - - - - - - HTH_18 PHJFGMMN_02326 411477.PARMER_04296 1.11e-190 528.0 COG0667@1|root,COG0667@2|Bacteria,4NEB0@976|Bacteroidetes,2FMYE@200643|Bacteroidia,22XRR@171551|Porphyromonadaceae 976|Bacteroidetes C related to aryl-alcohol - - - - - - - - - - - - Aldo_ket_red PHJFGMMN_02327 411477.PARMER_04298 1.02e-235 650.0 COG0716@1|root,COG4925@1|root,COG0716@2|Bacteria,COG4925@2|Bacteria,4NGN0@976|Bacteroidetes,2FPW7@200643|Bacteroidia,22ZYM@171551|Porphyromonadaceae 976|Bacteroidetes C Flavodoxin - - - - - - - - - - - - Flavodoxin_4 PHJFGMMN_02328 411477.PARMER_04299 8.28e-135 381.0 COG0110@1|root,COG0110@2|Bacteria,4NHFM@976|Bacteroidetes,2G328@200643|Bacteroidia,22W8P@171551|Porphyromonadaceae 976|Bacteroidetes S Hexapeptide repeat of succinyl-transferase - - - - - - - - - - - - Hexapep,Hexapep_2 PHJFGMMN_02329 411477.PARMER_04300 7.74e-231 635.0 COG0667@1|root,COG0667@2|Bacteria,4NEB0@976|Bacteroidetes,2FRJT@200643|Bacteroidia 976|Bacteroidetes C aldo keto reductase - - - - - - - - - - - - Aldo_ket_red PHJFGMMN_02330 411477.PARMER_04301 9.98e-127 360.0 COG1917@1|root,COG1917@2|Bacteria,4P6GJ@976|Bacteroidetes 976|Bacteroidetes S ARD/ARD' family - - - - - - - - - - - - Cupin_2 PHJFGMMN_02331 411477.PARMER_04302 8.59e-250 684.0 COG2159@1|root,COG2159@2|Bacteria,4NJ2V@976|Bacteroidetes,2FR6S@200643|Bacteroidia,22ZRA@171551|Porphyromonadaceae 976|Bacteroidetes S Amidohydrolase - - 4.1.1.52 ko:K22213 - - - - ko00000,ko01000 - - - Amidohydro_2 PHJFGMMN_02332 411477.PARMER_04303 7e-243 667.0 COG1359@1|root,COG1853@1|root,COG1359@2|Bacteria,COG1853@2|Bacteria,4NPQM@976|Bacteroidetes,2FME8@200643|Bacteroidia 976|Bacteroidetes S Flavin reductase like domain - - - - - - - - - - - - ABM,Flavin_Reduct PHJFGMMN_02333 411477.PARMER_04304 5.72e-190 527.0 COG0599@1|root,COG1917@1|root,COG0599@2|Bacteria,COG1917@2|Bacteria,4NHTC@976|Bacteroidetes,2FN4M@200643|Bacteroidia,22X16@171551|Porphyromonadaceae 976|Bacteroidetes S Carboxymuconolactone decarboxylase family - - 4.1.1.44 ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 - R03470 RC00938 ko00000,ko00001,ko01000 - - - CMD,Cupin_2 PHJFGMMN_02334 411477.PARMER_04305 1.32e-136 386.0 COG0716@1|root,COG0716@2|Bacteria,4NF3U@976|Bacteroidetes,2FPR4@200643|Bacteroidia,22XQ8@171551|Porphyromonadaceae 976|Bacteroidetes C Flavodoxin - - - - - - - - - - - - Flavodoxin_4 PHJFGMMN_02335 411477.PARMER_04306 1.42e-248 681.0 COG0667@1|root,COG0667@2|Bacteria,4NKHD@976|Bacteroidetes,2FQ6I@200643|Bacteroidia,231FZ@171551|Porphyromonadaceae 976|Bacteroidetes C Aldo/keto reductase family - - - - - - - - - - - - Aldo_ket_red PHJFGMMN_02336 411477.PARMER_04307 2.18e-138 391.0 COG0702@1|root,COG0702@2|Bacteria,4NNCX@976|Bacteroidetes,2FU5S@200643|Bacteroidia,230WB@171551|Porphyromonadaceae 976|Bacteroidetes GM NmrA-like family - - - - - - - - - - - - NAD_binding_10 PHJFGMMN_02337 411477.PARMER_04308 9.01e-178 495.0 COG1028@1|root,COG1028@2|Bacteria,4NGQY@976|Bacteroidetes,2FMZ0@200643|Bacteroidia,22YBH@171551|Porphyromonadaceae 976|Bacteroidetes IQ KR domain - - - - - - - - - - - - adh_short_C2 PHJFGMMN_02338 411477.PARMER_04309 1.23e-224 618.0 COG0656@1|root,COG0656@2|Bacteria,4NFTA@976|Bacteroidetes,2FXF3@200643|Bacteroidia,230G2@171551|Porphyromonadaceae 976|Bacteroidetes S Aldo/keto reductase family ytbE - - - - - - - - - - - Aldo_ket_red PHJFGMMN_02339 411477.PARMER_04311 7.54e-133 376.0 COG0655@1|root,COG0655@2|Bacteria,4NHHY@976|Bacteroidetes,2FQJ4@200643|Bacteroidia,231T8@171551|Porphyromonadaceae 976|Bacteroidetes S NADPH-dependent FMN reductase - - - - - - - - - - - - FMN_red PHJFGMMN_02340 411477.PARMER_04312 4.7e-35 119.0 COG1826@1|root,COG1826@2|Bacteria,4NUNH@976|Bacteroidetes,2FUYY@200643|Bacteroidia,230Y9@171551|Porphyromonadaceae 976|Bacteroidetes U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system tatA - - ko:K03116 ko03060,ko03070,map03060,map03070 M00336 - - ko00000,ko00001,ko00002,ko02044 2.A.64 - - MttA_Hcf106 PHJFGMMN_02341 411477.PARMER_04313 7.35e-176 491.0 COG0805@1|root,COG0805@2|Bacteria,4NEKM@976|Bacteroidetes,2FNUF@200643|Bacteroidia,22WUU@171551|Porphyromonadaceae 976|Bacteroidetes U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes tatC - - ko:K03118 ko03060,ko03070,map03060,map03070 M00336 - - ko00000,ko00001,ko00002,ko02044 2.A.64 - - TatC PHJFGMMN_02342 411477.PARMER_04314 0.0 1310.0 COG0642@1|root,COG0745@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,4NFEF@976|Bacteroidetes,2FNF0@200643|Bacteroidia,22WEZ@171551|Porphyromonadaceae 976|Bacteroidetes T ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - - - - - - - - - - HATPase_c,HisKA,Response_reg PHJFGMMN_02343 1077285.AGDG01000028_gene1444 7.92e-20 90.1 COG0642@1|root,COG0745@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,4NFEF@976|Bacteroidetes,2FNF0@200643|Bacteroidia,4AKY3@815|Bacteroidaceae 976|Bacteroidetes T ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - - - - - - - - - - HATPase_c,HisKA,Response_reg PHJFGMMN_02344 411477.PARMER_04316 1.67e-309 843.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMCJ@200643|Bacteroidia,22X7M@171551|Porphyromonadaceae 976|Bacteroidetes T COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - ko:K07713 ko02020,map02020 M00499 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat PHJFGMMN_02345 411477.PARMER_04317 2.41e-262 718.0 COG4974@1|root,COG4974@2|Bacteria,4NX3Q@976|Bacteroidetes,2G3F8@200643|Bacteroidia,22X4X@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_02347 411477.PARMER_04320 5.6e-22 85.1 2A8CH@1|root,30XE6@2|Bacteria,4PAUQ@976|Bacteroidetes,2FQBR@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02348 411477.PARMER_04323 4.88e-76 226.0 COG0380@1|root,COG0380@2|Bacteria,4NGJ4@976|Bacteroidetes,2FN4R@200643|Bacteroidia,22XH5@171551|Porphyromonadaceae 976|Bacteroidetes G Trehalose-phosphatase otsB - 2.4.1.15,3.1.3.12 ko:K16055 ko00500,ko01100,map00500,map01100 - R02737,R02778 RC00005,RC00017,RC00049,RC02748 ko00000,ko00001,ko01000,ko01003 - GT20 - Glyco_transf_20,Trehalose_PPase PHJFGMMN_02352 411477.PARMER_04329 7.96e-19 77.0 COG2204@1|root,COG2204@2|Bacteria 2|Bacteria T phosphorelay signal transduction system - - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat PHJFGMMN_02353 411477.PARMER_04332 1.52e-103 299.0 COG2204@1|root,COG2204@2|Bacteria 2|Bacteria T phosphorelay signal transduction system - - 3.4.21.53 ko:K01338 ko04112,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - HATPase_c_2,HTH_8,Response_reg,Sigma54_activ_2 PHJFGMMN_02355 411477.PARMER_04335 0.0 1130.0 COG2060@1|root,COG2060@2|Bacteria,4NF2G@976|Bacteroidetes,2FP4S@200643|Bacteroidia,22WF2@171551|Porphyromonadaceae 976|Bacteroidetes P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane kdpA GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031420,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 ko:K01546 ko02020,map02020 - - - ko00000,ko00001,ko01000 3.A.3.7 - - KdpA PHJFGMMN_02356 411477.PARMER_04336 0.0 1271.0 COG2216@1|root,COG2216@2|Bacteria,4NFBI@976|Bacteroidetes,2FND6@200643|Bacteroidia,22VUY@171551|Porphyromonadaceae 976|Bacteroidetes P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system kdpB - 3.6.3.12 ko:K01547 ko02020,map02020 - - - ko00000,ko00001,ko01000 3.A.3.7 - - E1-E2_ATPase,Hydrolase PHJFGMMN_02357 411477.PARMER_04337 9.98e-134 379.0 COG2156@1|root,COG2156@2|Bacteria,4NMME@976|Bacteroidetes,2FP8I@200643|Bacteroidia,22XKR@171551|Porphyromonadaceae 976|Bacteroidetes P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex kdpC GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 ko:K01548 ko02020,map02020 - - - ko00000,ko00001,ko01000 3.A.3.7 - - KdpC PHJFGMMN_02358 411477.PARMER_04338 3.69e-183 509.0 29A93@1|root,2ZX9Y@2|Bacteria,4NNMP@976|Bacteroidetes,2FN4N@200643|Bacteroidia,22XQZ@171551|Porphyromonadaceae 976|Bacteroidetes S non supervised orthologous group - - - - - - - - - - - - Gcw_chp PHJFGMMN_02359 411477.PARMER_04339 3.85e-239 659.0 COG0642@1|root,COG2205@2|Bacteria,4NEZM@976|Bacteroidetes,2FN1Z@200643|Bacteroidia,22X0P@171551|Porphyromonadaceae 976|Bacteroidetes T Osmosensitive K+ channel His kinase sensor domain kdpD - 2.7.13.3 ko:K07646 ko02020,map02020 M00454 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - KdpD,Usp PHJFGMMN_02360 411477.PARMER_04340 0.0 1083.0 COG5002@1|root,COG5002@2|Bacteria,4NDTV@976|Bacteroidetes,2FP04@200643|Bacteroidia,22W6T@171551|Porphyromonadaceae 976|Bacteroidetes T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain covS - - - - - - - - - - - 4HB_MCP_1,HAMP,HATPase_c,HisKA,PAS PHJFGMMN_02361 411477.PARMER_04341 1.88e-316 862.0 COG0527@1|root,COG0527@2|Bacteria,4NFWR@976|Bacteroidetes,2FMTV@200643|Bacteroidia,22X04@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the aspartokinase family lysC - 2.7.2.4 ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R00480 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase PHJFGMMN_02362 411477.PARMER_04343 3.79e-316 861.0 COG0312@1|root,COG0312@2|Bacteria,4NE1F@976|Bacteroidetes,2FPXY@200643|Bacteroidia,22X4I@171551|Porphyromonadaceae 976|Bacteroidetes S Putative modulator of DNA gyrase tldD3 - - ko:K03592 - - - - ko00000,ko01002 - - - PmbA_TldD PHJFGMMN_02363 411477.PARMER_04344 0.0 1018.0 COG0312@1|root,COG0312@2|Bacteria,4NG2Y@976|Bacteroidetes,2FN09@200643|Bacteroidia,22X19@171551|Porphyromonadaceae 976|Bacteroidetes S Putative modulator of DNA gyrase tldD1 - - ko:K03568 - - - - ko00000,ko01002 - - - PmbA_TldD PHJFGMMN_02364 411477.PARMER_04345 4.62e-315 855.0 COG0641@1|root,COG0641@2|Bacteria,4NG1N@976|Bacteroidetes,2FMBY@200643|Bacteroidia,22WJ8@171551|Porphyromonadaceae 976|Bacteroidetes C oxidizes both cysteine and serine residues to C-alpha-formylglycine in sulfatase enzyme protein substrates atsB - - ko:K06871 - - - - ko00000 - - - Fer4_12,Fer4_14,Radical_SAM,SPASM PHJFGMMN_02365 999419.HMPREF1077_02829 2.61e-235 648.0 COG0860@1|root,COG0860@2|Bacteria,4NHZA@976|Bacteroidetes,2FP3Y@200643|Bacteroidia,22X0I@171551|Porphyromonadaceae 976|Bacteroidetes M N-acetylmuramoyl-L-alanine amidase - - 3.5.1.28 ko:K01448 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 - - - Amidase_3 PHJFGMMN_02366 411477.PARMER_04351 4.28e-136 384.0 COG0494@1|root,COG0494@2|Bacteria,4NNGW@976|Bacteroidetes,2FRB2@200643|Bacteroidia,22XT9@171551|Porphyromonadaceae 976|Bacteroidetes L NUDIX domain - - 3.6.1.13 ko:K01515 ko00230,map00230 - R01054 RC00002 ko00000,ko00001,ko01000 - - - NUDIX PHJFGMMN_02367 411477.PARMER_04352 0.0 905.0 COG2755@1|root,COG2755@2|Bacteria,4NK39@976|Bacteroidetes,2FMHM@200643|Bacteroidia,22WFB@171551|Porphyromonadaceae 976|Bacteroidetes E COG COG2755 Lysophospholipase L1 and related esterases - - - - - - - - - - - - Lipase_GDSL,Lipase_GDSL_2 PHJFGMMN_02368 411477.PARMER_04353 8.37e-313 853.0 COG2755@1|root,COG2755@2|Bacteria,4NGW6@976|Bacteroidetes,2FN21@200643|Bacteroidia,22XZQ@171551|Porphyromonadaceae 976|Bacteroidetes E GDSL-like Lipase/Acylhydrolase - - - - - - - - - - - - Lipase_GDSL,Lipase_GDSL_2,LysM PHJFGMMN_02369 411477.PARMER_04354 0.0 1029.0 COG1696@1|root,COG1696@2|Bacteria,4NFK5@976|Bacteroidetes,2FM3F@200643|Bacteroidia,22X7T@171551|Porphyromonadaceae 976|Bacteroidetes M alginate O-acetyltransferase algI - - - - - - - - - - - MBOAT PHJFGMMN_02370 411477.PARMER_04355 0.0 1147.0 COG0614@1|root,COG0614@2|Bacteria,4PKXB@976|Bacteroidetes,2G07K@200643|Bacteroidia 976|Bacteroidetes P SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_02371 411477.PARMER_04356 0.0 2285.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_02372 411477.PARMER_04357 1.66e-245 674.0 COG3712@1|root,COG3712@2|Bacteria,4NICU@976|Bacteroidetes,2FPP5@200643|Bacteroidia,22YI8@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_02373 411477.PARMER_04358 6.75e-138 390.0 COG1595@1|root,COG1595@2|Bacteria,4NRE8@976|Bacteroidetes,2FSP5@200643|Bacteroidia,22YM8@171551|Porphyromonadaceae 976|Bacteroidetes K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_02375 411477.PARMER_04360 0.0 1296.0 COG3533@1|root,COG3533@2|Bacteria,4NFW3@976|Bacteroidetes,2FRKH@200643|Bacteroidia,22Z9V@171551|Porphyromonadaceae 976|Bacteroidetes S Beta-L-arabinofuranosidase, GH127 - - - ko:K09955 - - - - ko00000 - - - Glyco_hydro_127 PHJFGMMN_02376 411477.PARMER_04361 0.0 1488.0 COG0210@1|root,COG0210@2|Bacteria,4NDWN@976|Bacteroidetes,2FNIM@200643|Bacteroidia,22WFT@171551|Porphyromonadaceae 976|Bacteroidetes L DNA helicase pcrA - 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - UvrD-helicase,UvrD_C PHJFGMMN_02377 411477.PARMER_04366 5.61e-299 813.0 COG1168@1|root,COG1168@2|Bacteria,4NETH@976|Bacteroidetes,2FMIZ@200643|Bacteroidia,22ZZZ@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase class I and II patB - 4.4.1.8 ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 - R00782,R01286,R02408,R04941 RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 PHJFGMMN_02379 411477.PARMER_04368 7.36e-161 456.0 COG5434@1|root,COG5434@2|Bacteria,4NGH3@976|Bacteroidetes,2FMQQ@200643|Bacteroidia,22W0Q@171551|Porphyromonadaceae 976|Bacteroidetes M Protein of unknown function (DUF3737) - - - - - - - - - - - - DUF3737 PHJFGMMN_02380 411477.PARMER_04369 1.25e-54 171.0 COG1917@1|root,COG1917@2|Bacteria,4NHTC@976|Bacteroidetes,2FN4M@200643|Bacteroidia,22X16@171551|Porphyromonadaceae 976|Bacteroidetes S Carboxymuconolactone decarboxylase family - - 4.1.1.44 ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 - R03470 RC00938 ko00000,ko00001,ko01000 - - - CMD,Cupin_2 PHJFGMMN_02381 411477.PARMER_04370 4.98e-48 153.0 COG0599@1|root,COG0599@2|Bacteria,4PKGB@976|Bacteroidetes,2G3G7@200643|Bacteroidia 976|Bacteroidetes S Carboxymuconolactone decarboxylase family - - - - - - - - - - - - CMD PHJFGMMN_02382 411477.PARMER_04371 5.09e-109 314.0 COG1359@1|root,COG1359@2|Bacteria,4NTAS@976|Bacteroidetes,2G2QA@200643|Bacteroidia,230ZG@171551|Porphyromonadaceae 976|Bacteroidetes S Antibiotic biosynthesis monooxygenase - - - - - - - - - - - - ABM,Amidohydro_2,CMD PHJFGMMN_02383 411477.PARMER_04372 2.06e-220 607.0 COG2207@1|root,COG2207@2|Bacteria,4NDYY@976|Bacteroidetes,2FNFA@200643|Bacteroidia,22WH9@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator - - - - - - - - - - - - HTH_18 PHJFGMMN_02384 411477.PARMER_04373 1.93e-204 565.0 COG2207@1|root,COG2207@2|Bacteria 2|Bacteria K Transcriptional regulator - - - - - - - - - - - - HTH_18 PHJFGMMN_02386 411477.PARMER_04375 1.48e-118 338.0 COG1917@1|root,COG1917@2|Bacteria,4NRJA@976|Bacteroidetes,2G2QB@200643|Bacteroidia,231S9@171551|Porphyromonadaceae 976|Bacteroidetes S Cupin domain - - - - - - - - - - - - AraC_binding,Cupin_2 PHJFGMMN_02387 411477.PARMER_04376 5.16e-104 300.0 COG1073@1|root,COG1073@2|Bacteria,4NFJZ@976|Bacteroidetes,2FMNP@200643|Bacteroidia,22W0J@171551|Porphyromonadaceae 976|Bacteroidetes S COG COG1073 Hydrolases of the alpha beta superfamily - - - ko:K06889 - - - - ko00000 - - - CMD,DLH,Peptidase_S15 PHJFGMMN_02388 411477.PARMER_04377 3.74e-286 781.0 COG0599@1|root,COG1073@1|root,COG0599@2|Bacteria,COG1073@2|Bacteria,4NFJZ@976|Bacteroidetes,2FMNP@200643|Bacteroidia,22W0J@171551|Porphyromonadaceae 976|Bacteroidetes S COG COG1073 Hydrolases of the alpha beta superfamily - - - ko:K06889 - - - - ko00000 - - - CMD,DLH,Peptidase_S15 PHJFGMMN_02389 411477.PARMER_04378 7.19e-122 347.0 COG2207@1|root,COG2207@2|Bacteria,4P1X5@976|Bacteroidetes,2FS7A@200643|Bacteroidia,230B1@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator - - - - - - - - - - - - - PHJFGMMN_02390 411477.PARMER_04379 1.09e-226 623.0 COG2207@1|root,COG2207@2|Bacteria,4NDYY@976|Bacteroidetes,2FNFA@200643|Bacteroidia,22ZR4@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - HTH_18 PHJFGMMN_02391 411477.PARMER_04380 0.0 1172.0 COG0422@1|root,COG0422@2|Bacteria,4NFTF@976|Bacteroidetes,2FMBC@200643|Bacteroidia,22W6U@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction thiC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 ko:K03147 ko00730,ko01100,map00730,map01100 M00127 R03472 RC03251,RC03252 ko00000,ko00001,ko00002,ko01000 - - - ThiC-associated,ThiC_Rad_SAM PHJFGMMN_02392 411477.PARMER_04381 5.27e-182 505.0 COG0352@1|root,COG0352@2|Bacteria,4NNFB@976|Bacteroidetes,2FMPB@200643|Bacteroidia,22XMN@171551|Porphyromonadaceae 976|Bacteroidetes H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) thiE GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 ko:K00788 ko00730,ko01100,map00730,map01100 M00127 R03223,R10712 RC00224,RC03255,RC03397 ko00000,ko00001,ko00002,ko01000 - - - Phos_pyr_kin,TMP-TENI PHJFGMMN_02393 411477.PARMER_04382 7.31e-148 415.0 COG0352@1|root,COG0352@2|Bacteria,4NRDR@976|Bacteroidetes,2FNNJ@200643|Bacteroidia,22Y4V@171551|Porphyromonadaceae 976|Bacteroidetes H Thiamine monophosphate synthase thiE - 2.5.1.3 ko:K00788 ko00730,ko01100,map00730,map01100 M00127 R03223,R10712 RC00224,RC03255,RC03397 ko00000,ko00001,ko00002,ko01000 - - - TMP-TENI PHJFGMMN_02394 411477.PARMER_04383 7.19e-197 546.0 COG0351@1|root,COG0351@2|Bacteria,4NE0F@976|Bacteroidetes,2FNNE@200643|Bacteroidia,22XEP@171551|Porphyromonadaceae 976|Bacteroidetes H Phosphomethylpyrimidine kinase thiD - 2.7.1.49,2.7.4.7 ko:K00941 ko00730,ko01100,map00730,map01100 M00127 R03471,R04509 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - Phos_pyr_kin PHJFGMMN_02395 411477.PARMER_04385 0.0 1713.0 COG4775@1|root,COG4775@2|Bacteria,4NDYT@976|Bacteroidetes,2FMTK@200643|Bacteroidia,22WRF@171551|Porphyromonadaceae 976|Bacteroidetes M CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2 PHJFGMMN_02396 411477.PARMER_04386 0.0 873.0 COG4775@1|root,COG4775@2|Bacteria,4NICB@976|Bacteroidetes,2FP3X@200643|Bacteroidia,22YAP@171551|Porphyromonadaceae 976|Bacteroidetes M Surface antigen - - - - - - - - - - - - Bac_surface_Ag PHJFGMMN_02397 411477.PARMER_04387 2.81e-104 302.0 2BZE3@1|root,33WNC@2|Bacteria,4P35P@976|Bacteroidetes,2FPVE@200643|Bacteroidia 976|Bacteroidetes S COG NOG28134 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_02399 411477.PARMER_04390 8.2e-113 324.0 COG0450@1|root,COG0450@2|Bacteria,4NS8B@976|Bacteroidetes,2FPJE@200643|Bacteroidia,22YH1@171551|Porphyromonadaceae 976|Bacteroidetes O Thioredoxin-like - - - - - - - - - - - - AhpC-TSA,Redoxin,Thioredoxin_8 PHJFGMMN_02401 999419.HMPREF1077_02994 7.07e-27 107.0 COG0309@1|root,COG0309@2|Bacteria,4NG57@976|Bacteroidetes,2FNVB@200643|Bacteroidia,22WZP@171551|Porphyromonadaceae 976|Bacteroidetes O AIR synthase related protein, N-terminal domain - - - ko:K04655 - - - - ko00000 - - - AIRS,AIRS_C PHJFGMMN_02402 411477.PARMER_04394 0.0 1242.0 COG0068@1|root,COG0068@2|Bacteria,4NIZ1@976|Bacteroidetes,2FRRN@200643|Bacteroidia,22X9I@171551|Porphyromonadaceae 976|Bacteroidetes O Acylphosphatase - - - ko:K04656 - - - - ko00000 - - - Acylphosphatase,Peptidase_M22,Sua5_yciO_yrdC,zf-HYPF PHJFGMMN_02403 999419.HMPREF1077_02990 3.13e-14 67.4 COG0375@1|root,COG0375@2|Bacteria,4NWR5@976|Bacteroidetes,2FV7V@200643|Bacteroidia,22YT9@171551|Porphyromonadaceae 976|Bacteroidetes S Probably plays a role in a hydrogenase nickel cofactor insertion step hypA - - ko:K04651 - - - - ko00000,ko03110 - - - HypA PHJFGMMN_02404 411477.PARMER_04397 1.1e-115 333.0 COG0378@1|root,COG0378@2|Bacteria,4NJ0P@976|Bacteroidetes,2FSAE@200643|Bacteroidia,22XN0@171551|Porphyromonadaceae 976|Bacteroidetes KO CobW/HypB/UreG, nucleotide-binding domain hypB - - ko:K04652 - - - - ko00000,ko03110 - - - cobW PHJFGMMN_02405 411477.PARMER_04398 0.0 1347.0 COG0045@1|root,COG1042@1|root,COG0045@2|Bacteria,COG1042@2|Bacteria,4NFTI@976|Bacteroidetes,2FNSJ@200643|Bacteroidia,22WFU@171551|Porphyromonadaceae 976|Bacteroidetes C CoA ligase - - - ko:K09181 - - - - ko00000 - - - ATP-grasp_5,CoA_binding_2,Succ_CoA_lig PHJFGMMN_02407 411477.PARMER_04399 0.0 1786.0 COG0574@1|root,COG1080@1|root,COG0574@2|Bacteria,COG1080@2|Bacteria,4NEHE@976|Bacteroidetes,2FM8K@200643|Bacteroidia,22W14@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the PEP-utilizing enzyme family ppdK - 2.7.9.1 ko:K01006 ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200 M00169,M00171,M00172,M00173 R00206 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000 - - - PEP-utilizers,PEP-utilizers_C,PPDK_N PHJFGMMN_02408 411477.PARMER_04401 3.01e-84 249.0 COG3279@1|root,COG3279@2|Bacteria,4NZ6I@976|Bacteroidetes,2FUMY@200643|Bacteroidia,22YXF@171551|Porphyromonadaceae 976|Bacteroidetes K LytTr DNA-binding domain - - - - - - - - - - - - LytTR PHJFGMMN_02409 411477.PARMER_04402 3.72e-159 445.0 COG1716@1|root,COG1716@2|Bacteria,4NVZX@976|Bacteroidetes,2FVZR@200643|Bacteroidia,23024@171551|Porphyromonadaceae 976|Bacteroidetes T Inner membrane component of T3SS, cytoplasmic domain - - - - - - - - - - - - FHA PHJFGMMN_02411 411477.PARMER_04404 1.64e-119 341.0 COG1716@1|root,COG1716@2|Bacteria,4NU70@976|Bacteroidetes,2FW38@200643|Bacteroidia,231D9@171551|Porphyromonadaceae 976|Bacteroidetes T FHA domain - - - - - - - - - - - - FHA PHJFGMMN_02412 411477.PARMER_04405 7.8e-195 540.0 COG0631@1|root,COG0631@2|Bacteria,4NUGP@976|Bacteroidetes,2FUFR@200643|Bacteroidia,2311X@171551|Porphyromonadaceae 976|Bacteroidetes T Serine/threonine phosphatases, family 2C, catalytic domain - - 3.1.3.16 ko:K20074 - - - - ko00000,ko01000,ko01009 - - - PP2C_2 PHJFGMMN_02413 411477.PARMER_04406 0.0 1170.0 COG0515@1|root,COG0515@2|Bacteria,4NMTE@976|Bacteroidetes,2FS85@200643|Bacteroidia,22Z0F@171551|Porphyromonadaceae 976|Bacteroidetes KLT Protein tyrosine kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase PHJFGMMN_02414 411477.PARMER_04407 1.44e-237 652.0 COG0790@1|root,COG0790@2|Bacteria,4NZQT@976|Bacteroidetes,2FWAZ@200643|Bacteroidia,22ZCQ@171551|Porphyromonadaceae 976|Bacteroidetes S COG0790 FOG TPR repeat, SEL1 subfamily - - - - - - - - - - - - PEGA PHJFGMMN_02415 411477.PARMER_04408 0.0 1445.0 COG3055@1|root,COG3055@2|Bacteria,4PKTP@976|Bacteroidetes,2G0HP@200643|Bacteroidia,2324F@171551|Porphyromonadaceae 976|Bacteroidetes S Fibronectin type 3 domain - - - - - - - - - - - - Kelch_1 PHJFGMMN_02416 411477.PARMER_04409 1.79e-214 592.0 COG1045@1|root,COG1045@2|Bacteria,4NGZ7@976|Bacteroidetes,2FM9U@200643|Bacteroidia,22XAZ@171551|Porphyromonadaceae 976|Bacteroidetes E Serine acetyltransferase cysE - 2.3.1.30 ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 M00021 R00586 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 - - - Hexapep,SATase_N PHJFGMMN_02417 411477.PARMER_04410 1.13e-89 263.0 COG3411@1|root,COG3411@2|Bacteria,4NQQ2@976|Bacteroidetes,2FTGH@200643|Bacteroidia,22Y5H@171551|Porphyromonadaceae 976|Bacteroidetes C Ferredoxin - - 1.12.1.3 ko:K17992 - - - - ko00000,ko01000 - - - - PHJFGMMN_02418 999419.HMPREF1077_02914 0.0 1165.0 COG1894@1|root,COG1894@2|Bacteria,4NFB5@976|Bacteroidetes,2FN7A@200643|Bacteroidia,22X6V@171551|Porphyromonadaceae 976|Bacteroidetes C NADH-ubiquinone oxidoreductase-F iron-sulfur binding region nuoF - 1.12.1.3,1.6.5.3 ko:K00335,ko:K18331 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - 2Fe-2S_thioredx,Complex1_51K,Fer4,NADH_4Fe-4S,SLBB PHJFGMMN_02419 411477.PARMER_04412 0.0 1204.0 COG3383@1|root,COG4624@1|root,COG3383@2|Bacteria,COG4624@2|Bacteria,4PKV4@976|Bacteroidetes,2FNTR@200643|Bacteroidia,22XI7@171551|Porphyromonadaceae 976|Bacteroidetes C Iron hydrogenase small subunit hndD - 1.12.1.3,1.17.1.9 ko:K00123,ko:K18332 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 - R00519 RC02796 ko00000,ko00001,ko01000 - - - Fe_hyd_SSU,Fe_hyd_lg_C,Fer2_4,Fer4,Fer4_7,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,NADH-G_4Fe-4S_3 PHJFGMMN_02420 411477.PARMER_04413 1.41e-114 328.0 COG1905@1|root,COG1905@2|Bacteria,4NHIQ@976|Bacteroidetes,2FNZ6@200643|Bacteroidia,22XW4@171551|Porphyromonadaceae 976|Bacteroidetes C Thioredoxin-like [2Fe-2S] ferredoxin hndA - 1.12.1.3 ko:K18330 - - - - ko00000,ko01000 - - - 2Fe-2S_thioredx PHJFGMMN_02421 411477.PARMER_04414 0.0 944.0 COG1012@1|root,COG1012@2|Bacteria,4NEB7@976|Bacteroidetes,2G2XR@200643|Bacteroidia,231K4@171551|Porphyromonadaceae 976|Bacteroidetes C Aldehyde dehydrogenase family - - 1.2.1.21,1.2.1.22 ko:K07248 ko00620,ko00630,ko01120,map00620,map00630,map01120 - R00203,R01333,R01446 RC00080,RC00104,RC00242 ko00000,ko00001,ko01000 - - - Aldedh PHJFGMMN_02423 411477.PARMER_01739 0.0 1853.0 28IXK@1|root,2Z8VG@2|Bacteria,4NK45@976|Bacteroidetes,2FWV3@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02424 411477.PARMER_01740 0.0 1893.0 COG1434@1|root,COG1470@1|root,COG1434@2|Bacteria,COG1470@2|Bacteria,4NE96@976|Bacteroidetes,2FR8X@200643|Bacteroidia,22ZBD@171551|Porphyromonadaceae 976|Bacteroidetes S NPCBM/NEW2 domain - - - - - - - - - - - - NPCBM PHJFGMMN_02425 411477.PARMER_01741 0.0 1561.0 COG3669@1|root,COG3669@2|Bacteria,4NGKB@976|Bacteroidetes,2FM4I@200643|Bacteroidia,22XEY@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain - - 3.2.1.50 ko:K01205 ko00531,ko01100,ko04142,map00531,map01100,map04142 M00078 R07816 - ko00000,ko00001,ko00002,ko01000,ko04147 - - - NAGLU,NAGLU_C,NAGLU_N PHJFGMMN_02426 411477.PARMER_01742 0.0 1578.0 COG3345@1|root,COG3345@2|Bacteria,4PMM4@976|Bacteroidetes,2G0H2@200643|Bacteroidia,23240@171551|Porphyromonadaceae 976|Bacteroidetes G alpha-galactosidase - - - - - - - - - - - - - PHJFGMMN_02427 411477.PARMER_01743 3.55e-296 809.0 COG0668@1|root,COG0668@2|Bacteria,4NE4R@976|Bacteroidetes,2FN78@200643|Bacteroidia,22X9A@171551|Porphyromonadaceae 976|Bacteroidetes M Mechanosensitive ion channel ybdG_2 - - ko:K16053 - - - - ko00000,ko02000 1.A.23.4.5 - - MS_channel PHJFGMMN_02428 411477.PARMER_01744 6.35e-276 755.0 COG0668@1|root,COG0668@2|Bacteria,4NE4R@976|Bacteroidetes,2FMKI@200643|Bacteroidia,231UB@171551|Porphyromonadaceae 976|Bacteroidetes M Mechanosensitive ion channel ybdG_1 - - ko:K16053 - - - - ko00000,ko02000 1.A.23.4.5 - - MS_channel PHJFGMMN_02429 411477.PARMER_01745 0.0 1889.0 COG0612@1|root,COG0612@2|Bacteria,4NDXM@976|Bacteroidetes,2FNQC@200643|Bacteroidia,22WU8@171551|Porphyromonadaceae 976|Bacteroidetes S Insulinase (Peptidase family M16) - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C PHJFGMMN_02430 411477.PARMER_01746 9.91e-109 312.0 2ATIR@1|root,31J2R@2|Bacteria,4NR1Z@976|Bacteroidetes,2FUCT@200643|Bacteroidia,22YN9@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4268) - - - - - - - - - - - - DUF4268 PHJFGMMN_02431 411477.PARMER_01747 0.0 1681.0 COG0308@1|root,COG0308@2|Bacteria,4NGTZ@976|Bacteroidetes,2FQE9@200643|Bacteroidia,22X2F@171551|Porphyromonadaceae 976|Bacteroidetes E Peptidase family M1 domain pepN - 3.4.11.2 ko:K01256 ko00480,ko01100,map00480,map01100 - R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 - - - ERAP1_C,Peptidase_M1 PHJFGMMN_02432 411477.PARMER_01749 2.31e-195 542.0 COG0040@1|root,COG0040@2|Bacteria,4NDW8@976|Bacteroidetes,2FNGI@200643|Bacteroidia,22VX5@171551|Porphyromonadaceae 976|Bacteroidetes F ATP phosphoribosyltransferase hisG GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 ko:K00765 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R01071 RC02819,RC03200 ko00000,ko00001,ko00002,ko01000 - - - HisG,HisG_C PHJFGMMN_02433 411477.PARMER_01750 1.46e-299 818.0 COG0141@1|root,COG0141@2|Bacteria,4NFPZ@976|Bacteroidetes,2FMY9@200643|Bacteroidia,22WQW@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine hisD GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 ko:K00013 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R01158,R01163,R03012 RC00099,RC00242,RC00463 ko00000,ko00001,ko00002,ko01000 - - - Histidinol_dh PHJFGMMN_02434 411477.PARMER_01751 7.94e-249 682.0 COG0079@1|root,COG0079@2|Bacteria,4NEDI@976|Bacteroidetes,2FMFQ@200643|Bacteroidia,22WB3@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily hisC - 2.6.1.9 ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 M00026 R00694,R00734,R03243 RC00006,RC00888 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2 PHJFGMMN_02435 411477.PARMER_01752 1.39e-281 768.0 COG0131@1|root,COG0241@1|root,COG0131@2|Bacteria,COG0241@2|Bacteria,4NENP@976|Bacteroidetes,2FP1T@200643|Bacteroidia,22VYJ@171551|Porphyromonadaceae 976|Bacteroidetes E Histidine biosynthesis bifunctional protein HisB hisB GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 ko:K01089,ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R03013,R03457 RC00017,RC00932 ko00000,ko00001,ko00002,ko01000 - - - Hydrolase_like,IGPD,PNK3P PHJFGMMN_02436 411477.PARMER_01753 2.31e-282 769.0 COG3940@1|root,COG3940@2|Bacteria,4PMUR@976|Bacteroidetes,2FNKX@200643|Bacteroidia,22Z7G@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 43 - - - - - - - - - - - - Glyco_hydro_43 PHJFGMMN_02437 411477.PARMER_01754 2.96e-92 270.0 2EGY2@1|root,33AQ7@2|Bacteria,4NY9E@976|Bacteroidetes,2FSA3@200643|Bacteroidia,230TW@171551|Porphyromonadaceae 976|Bacteroidetes S Lipocalin-like domain - - - - - - - - - - - - Lipocalin_8 PHJFGMMN_02438 411477.PARMER_01755 8.27e-187 520.0 2B69Q@1|root,31Z76@2|Bacteria,4P4FW@976|Bacteroidetes,2FTT6@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02439 411477.PARMER_01757 6.08e-112 321.0 COG2606@1|root,COG2606@2|Bacteria,4NNGB@976|Bacteroidetes,2FMXW@200643|Bacteroidia,22XPG@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily ybaK - - ko:K03976 - - - - ko00000,ko01000,ko03016 - - - tRNA_edit PHJFGMMN_02440 411477.PARMER_01758 0.0 1323.0 COG2183@1|root,COG2183@2|Bacteria,4NETD@976|Bacteroidetes,2FMAZ@200643|Bacteroidia,22VY3@171551|Porphyromonadaceae 976|Bacteroidetes K Tex-like protein N-terminal domain yhgF - - ko:K06959 - - - - ko00000 - - - HHH_3,S1,Tex_N,Tex_YqgF PHJFGMMN_02441 411477.PARMER_01760 0.0 887.0 COG0600@1|root,COG1116@1|root,COG0600@2|Bacteria,COG1116@2|Bacteria,4NR2E@976|Bacteroidetes,2FT4S@200643|Bacteroidia,22ZSQ@171551|Porphyromonadaceae 976|Bacteroidetes P Binding-protein-dependent transport system inner membrane component - - - ko:K02050 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - ABC_tran,BPD_transp_1 PHJFGMMN_02442 411477.PARMER_01761 4.33e-200 555.0 COG0715@1|root,COG0715@2|Bacteria,4NVT8@976|Bacteroidetes,2FUZH@200643|Bacteroidia,230H5@171551|Porphyromonadaceae 976|Bacteroidetes P COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - ko:K02051 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - - PHJFGMMN_02443 999419.HMPREF1077_02908 0.0 1624.0 COG0542@1|root,COG0542@2|Bacteria,4NE1J@976|Bacteroidetes,2FNNW@200643|Bacteroidia,22VW7@171551|Porphyromonadaceae 976|Bacteroidetes O Belongs to the ClpA ClpB family clpC - - ko:K03696 ko01100,map01100 - - - ko00000,ko03110 - - - AAA,AAA_2,ClpB_D2-small,Clp_N,UVR PHJFGMMN_02444 411477.PARMER_01763 0.0 1632.0 COG0188@1|root,COG0188@2|Bacteria,4NDWQ@976|Bacteroidetes,2FMCP@200643|Bacteroidia,22WV3@171551|Porphyromonadaceae 976|Bacteroidetes L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner gyrA - 5.99.1.3 ko:K02469 - - - - ko00000,ko01000,ko03032,ko03400 - - - DNA_gyraseA_C,DNA_topoisoIV PHJFGMMN_02445 411477.PARMER_01764 1.13e-274 753.0 COG0457@1|root,COG0457@2|Bacteria,4NIY9@976|Bacteroidetes,2FP2Z@200643|Bacteroidia,22WMV@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat protein - - - - - - - - - - - - TPR_11,TPR_16,TPR_8 PHJFGMMN_02447 411477.PARMER_01766 3.02e-136 387.0 COG1961@1|root,COG1961@2|Bacteria,4NJM8@976|Bacteroidetes,2FMQS@200643|Bacteroidia,22XYK@171551|Porphyromonadaceae 976|Bacteroidetes L Resolvase, N terminal domain - - - - - - - - - - - - HTH_7,Resolvase PHJFGMMN_02449 411477.PARMER_01769 0.0 957.0 COG2265@1|root,COG2265@2|Bacteria,4NFP1@976|Bacteroidetes,2FNRC@200643|Bacteroidia,22X3X@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family rumA - 2.1.1.190 ko:K03215 - - - - ko00000,ko01000,ko03009 - - - TRAM,tRNA_U5-meth_tr PHJFGMMN_02450 411477.PARMER_01770 0.0 944.0 COG4623@1|root,COG4623@2|Bacteria,4NHFW@976|Bacteroidetes,2FN2R@200643|Bacteroidia,22W80@171551|Porphyromonadaceae 976|Bacteroidetes M Transglycosylase SLT domain mltF - - ko:K18691 - - - - ko00000,ko01000,ko01011 - - - SBP_bac_3,SLT PHJFGMMN_02451 411477.PARMER_01771 4.87e-123 350.0 COG4585@1|root,COG4585@2|Bacteria,4PMUS@976|Bacteroidetes,2G0H3@200643|Bacteroidia,22Y87@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - - - - - - - - - - HATPase_c PHJFGMMN_02452 411477.PARMER_01772 1.06e-177 494.0 COG0613@1|root,COG0613@2|Bacteria,4PMUT@976|Bacteroidetes,2G0H4@200643|Bacteroidia,22Y1H@171551|Porphyromonadaceae 976|Bacteroidetes S DNA polymerase alpha chain like domain - - - - - - - - - - - - PHP PHJFGMMN_02453 411477.PARMER_01773 1.54e-73 220.0 COG4109@1|root,COG4109@2|Bacteria,4NTA0@976|Bacteroidetes,2FTZ6@200643|Bacteroidia,22YI5@171551|Porphyromonadaceae 976|Bacteroidetes K DRTGG domain - - - - - - - - - - - - DRTGG PHJFGMMN_02454 411477.PARMER_01774 0.0 896.0 COG2000@1|root,COG2221@1|root,COG4624@1|root,COG2000@2|Bacteria,COG2221@2|Bacteria,COG4624@2|Bacteria,4NJAS@976|Bacteroidetes,2FMHZ@200643|Bacteroidia,22WWW@171551|Porphyromonadaceae 976|Bacteroidetes C Iron only hydrogenase large subunit, C-terminal domain - - - - - - - - - - - - FeS,Fe_hyd_lg_C,Fer4,Fer4_6 PHJFGMMN_02455 411477.PARMER_01775 3.4e-93 272.0 COG2172@1|root,COG2172@2|Bacteria,4NRAS@976|Bacteroidetes,2FT57@200643|Bacteroidia,22YBD@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-like ATPase domain - - - - - - - - - - - - HATPase_c,HATPase_c_2 PHJFGMMN_02456 411477.PARMER_01777 5.74e-79 234.0 COG4109@1|root,COG4109@2|Bacteria,4NTDQ@976|Bacteroidetes,2FTXG@200643|Bacteroidia,22YTZ@171551|Porphyromonadaceae 976|Bacteroidetes K DRTGG domain - - - - - - - - - - - - DRTGG PHJFGMMN_02457 411477.PARMER_01778 1.63e-198 550.0 COG5146@1|root,COG5146@2|Bacteria,4P0U7@976|Bacteroidetes,2FMS4@200643|Bacteroidia 976|Bacteroidetes H Pantothenate kinase - - 2.7.1.33 ko:K09680 ko00770,ko01100,map00770,map01100 M00120 R02971,R03018,R04391 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - Fumble PHJFGMMN_02458 411477.PARMER_01779 6.84e-103 297.0 2DY1V@1|root,347PF@2|Bacteria,4P5QK@976|Bacteroidetes,2FQ8B@200643|Bacteroidia 976|Bacteroidetes S COG NOG19145 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_02459 411477.PARMER_01780 0.0 915.0 COG0006@1|root,COG0006@2|Bacteria,4NG40@976|Bacteroidetes,2FMSQ@200643|Bacteroidia,22WVB@171551|Porphyromonadaceae 976|Bacteroidetes E Aminopeptidase P, N-terminal domain pepP - 3.4.11.9 ko:K01262 - - - - ko00000,ko01000,ko01002 - - - AMP_N,Peptidase_M24 PHJFGMMN_02460 411477.PARMER_01782 4.41e-288 787.0 COG0560@1|root,COG3830@1|root,COG0560@2|Bacteria,COG3830@2|Bacteria,4NHAG@976|Bacteroidetes,2FNI5@200643|Bacteroidia,22XCU@171551|Porphyromonadaceae 976|Bacteroidetes ET phosphoserine phosphatase serB - 3.1.3.3 ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R00582 RC00017 ko00000,ko00001,ko00002,ko01000,ko01009 - - - ACT_6,Glycos_transf_2,HAD PHJFGMMN_02461 411477.PARMER_01783 9.45e-67 202.0 2E3DE@1|root,32YCK@2|Bacteria,4NVFG@976|Bacteroidetes,2FT26@200643|Bacteroidia,22YQ5@171551|Porphyromonadaceae 976|Bacteroidetes S Stress responsive - - - - - - - - - - - - Dabb PHJFGMMN_02462 411477.PARMER_01784 1.14e-110 318.0 COG1433@1|root,COG1433@2|Bacteria,4NRPC@976|Bacteroidetes,2FPSP@200643|Bacteroidia,22Y9G@171551|Porphyromonadaceae 976|Bacteroidetes S Putative redox-active protein (C_GCAxxG_C_C) - - - - - - - - - - - - C_GCAxxG_C_C PHJFGMMN_02463 411477.PARMER_01785 1.13e-157 443.0 COG1285@1|root,COG1285@2|Bacteria,4NRHK@976|Bacteroidetes,2G370@200643|Bacteroidia,22Y5I@171551|Porphyromonadaceae 976|Bacteroidetes S MgtC family - - - ko:K07507 - - - - ko00000,ko02000 9.B.20 - - MgtC PHJFGMMN_02464 411477.PARMER_01786 0.0 1475.0 COG3345@1|root,COG3345@2|Bacteria,4NHAT@976|Bacteroidetes,2FM30@200643|Bacteroidia,22WS0@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 36 C-terminal domain - - 3.2.1.22 ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 - R01101,R01103,R01104,R01194,R01329,R02926,R03634,R04019,R04470,R05549,R05961,R06091 RC00049,RC00059,RC00451 ko00000,ko00001,ko01000 - - - Glyco_hydro_36C,Glyco_hydro_36N,Melibiase PHJFGMMN_02465 411477.PARMER_01787 8.92e-219 603.0 COG0167@1|root,COG0167@2|Bacteria,4NDVB@976|Bacteroidetes,2FPMW@200643|Bacteroidia,22XED@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily pyrD GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.98.1 ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 M00051 R01867,R01869 RC00051 ko00000,ko00001,ko00002,ko01000 - - - DHO_dh PHJFGMMN_02466 411477.PARMER_01788 4.7e-192 532.0 COG0543@1|root,COG0543@2|Bacteria,4NE35@976|Bacteroidetes,2FN69@200643|Bacteroidia,22WHB@171551|Porphyromonadaceae 976|Bacteroidetes C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( pyrK - - ko:K02823 ko00240,ko01100,map00240,map01100 - - - ko00000,ko00001 - - - DHODB_Fe-S_bind,FAD_binding_6,NAD_binding_1 PHJFGMMN_02467 411477.PARMER_01789 2.54e-101 293.0 COG3093@1|root,COG3093@2|Bacteria,4NSDG@976|Bacteroidetes,2FSS7@200643|Bacteroidia,22YQ7@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix XRE-family like proteins - - - - - - - - - - - - HTH_3,Phage_CI_repr PHJFGMMN_02468 411477.PARMER_01790 8.8e-240 659.0 COG1466@1|root,COG1466@2|Bacteria,4NEIB@976|Bacteroidetes,2FNY6@200643|Bacteroidia,22W6C@171551|Porphyromonadaceae 976|Bacteroidetes L DNA polymerase III holA - 2.7.7.7 ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta PHJFGMMN_02469 411477.PARMER_01791 5.46e-186 516.0 COG2820@1|root,COG2820@2|Bacteria,4NESQ@976|Bacteroidetes,2FP2V@200643|Bacteroidia,22W5E@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile amn - 3.2.2.4 ko:K01241 ko00230,map00230 - R00182 RC00063,RC00318 ko00000,ko00001,ko01000 - - - PNP_UDP_1 PHJFGMMN_02470 411477.PARMER_01792 1.65e-106 306.0 COG0610@1|root,COG0610@2|Bacteria,4PKFE@976|Bacteroidetes,2FPFZ@200643|Bacteroidia,2322A@171551|Porphyromonadaceae 976|Bacteroidetes V Type I restriction enzyme R protein N terminus (HSDR_N) - - - - - - - - - - - - HSDR_N_2 PHJFGMMN_02473 411477.PARMER_01795 0.0 863.0 COG2871@1|root,COG2871@2|Bacteria,4NFKC@976|Bacteroidetes,2FN44@200643|Bacteroidia,22WRI@171551|Porphyromonadaceae 976|Bacteroidetes C NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway nqrF - 1.6.5.8 ko:K00351 - - - - ko00000,ko01000 - - - FAD_binding_6,Fer2,NAD_binding_1 PHJFGMMN_02474 411477.PARMER_01796 2.32e-138 392.0 COG2209@1|root,COG2209@2|Bacteria,4NEU0@976|Bacteroidetes,2FMW9@200643|Bacteroidia,22WBF@171551|Porphyromonadaceae 976|Bacteroidetes C NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol nqrE - 1.6.5.8 ko:K00350 - - - - ko00000,ko01000 - - - Rnf-Nqr PHJFGMMN_02475 411477.PARMER_01797 5.22e-137 389.0 COG1347@1|root,COG1347@2|Bacteria,4NGD9@976|Bacteroidetes,2FN5K@200643|Bacteroidia,22VYS@171551|Porphyromonadaceae 976|Bacteroidetes C NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol nqrD - 1.6.5.8 ko:K00349 - - - - ko00000,ko01000 - - - Rnf-Nqr PHJFGMMN_02476 411477.PARMER_01798 1.34e-193 537.0 COG1592@1|root,COG2869@1|root,COG1592@2|Bacteria,COG2869@2|Bacteria,4NF7A@976|Bacteroidetes,2FMQM@200643|Bacteroidia,22XWP@171551|Porphyromonadaceae 976|Bacteroidetes C NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol nqrC - 1.6.5.8 ko:K00348 - - - - ko00000,ko01000 - - - FMN_bind PHJFGMMN_02477 411477.PARMER_01799 2.32e-279 764.0 COG4658@1|root,COG4658@2|Bacteria,4NFGW@976|Bacteroidetes,2FMD0@200643|Bacteroidia,22W1H@171551|Porphyromonadaceae 976|Bacteroidetes C NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol nqrB - 1.6.5.8 ko:K00347 - - - - ko00000,ko01000 - - - NQR2_RnfD_RnfE PHJFGMMN_02478 411477.PARMER_01800 0.0 889.0 COG1726@1|root,COG1726@2|Bacteria,4NEDQ@976|Bacteroidetes,2FN6J@200643|Bacteroidia,22XC8@171551|Porphyromonadaceae 976|Bacteroidetes C NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol nqrA - 1.6.5.8 ko:K00346 - - - - ko00000,ko01000 - - - NQRA,NQRA_SLBB PHJFGMMN_02479 411477.PARMER_01801 4.27e-314 854.0 28HE2@1|root,2Z7QJ@2|Bacteria,4NFBA@976|Bacteroidetes,2FMTF@200643|Bacteroidia,22W43@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF5103) - - - - - - - - - - - - DUF5103 PHJFGMMN_02480 411477.PARMER_01802 0.0 890.0 COG0402@1|root,COG0402@2|Bacteria,4NKZV@976|Bacteroidetes,2G2FQ@200643|Bacteroidia 976|Bacteroidetes F Amidohydrolase family guaD - 3.5.4.3 ko:K01487 ko00230,ko01100,map00230,map01100 - R01676 RC00204 ko00000,ko00001,ko01000 - - - Amidohydro_1 PHJFGMMN_02481 411477.PARMER_01803 1.85e-211 585.0 COG0053@1|root,COG0053@2|Bacteria,4NEID@976|Bacteroidetes,2FNNF@200643|Bacteroidia,22XFZ@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family fieF - - - - - - - - - - - Cation_efflux,ZT_dimer PHJFGMMN_02482 411477.PARMER_01804 0.0 1744.0 COG4775@1|root,COG4775@2|Bacteria,4NDYT@976|Bacteroidetes,2FMTK@200643|Bacteroidia,22WRF@171551|Porphyromonadaceae 976|Bacteroidetes M CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2 PHJFGMMN_02483 411477.PARMER_01805 1.16e-300 822.0 COG1757@1|root,COG1757@2|Bacteria,4NFF8@976|Bacteroidetes,2FMFY@200643|Bacteroidia,22X08@171551|Porphyromonadaceae 976|Bacteroidetes C Na H antiporter mleN - - ko:K03315 - - - - ko00000,ko02000 2.A.35 - - Na_H_antiporter PHJFGMMN_02486 411477.PARMER_01810 0.0 873.0 COG1541@1|root,COG1541@2|Bacteria,4NGRR@976|Bacteroidetes,2FMB4@200643|Bacteroidia,22WWM@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) paaK - 6.2.1.30 ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 - R02539 RC00004,RC00014 ko00000,ko00001,ko01000 - - - AMP-binding,AMP-binding_C_2 PHJFGMMN_02487 411477.PARMER_01811 3.27e-91 267.0 COG4747@1|root,COG4747@2|Bacteria,4NQIW@976|Bacteroidetes,2FS2U@200643|Bacteroidia,22YFA@171551|Porphyromonadaceae 976|Bacteroidetes S ACT domain protein - - - - - - - - - - - - - PHJFGMMN_02488 411477.PARMER_01812 1.78e-29 104.0 2A7AX@1|root,30W7K@2|Bacteria,4P9K8@976|Bacteroidetes,2FUYZ@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02489 411477.PARMER_01813 0.0 993.0 COG0591@1|root,COG0591@2|Bacteria,4NIH9@976|Bacteroidetes,2FPM7@200643|Bacteroidia 976|Bacteroidetes E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - ko:K03307 - - - - ko00000 2.A.21 - - SSF PHJFGMMN_02490 411477.PARMER_01814 0.0 1338.0 COG0326@1|root,COG0326@2|Bacteria,4NDXZ@976|Bacteroidetes,2FMED@200643|Bacteroidia,22W1D@171551|Porphyromonadaceae 976|Bacteroidetes O Molecular chaperone HSP90 htpG - - ko:K04079 ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418 - - - ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147 - - - HATPase_c_3,HSP90 PHJFGMMN_02491 411477.PARMER_01815 0.0 1546.0 COG1752@1|root,COG1752@2|Bacteria,4NDXY@976|Bacteroidetes,2FNEV@200643|Bacteroidia,22WBN@171551|Porphyromonadaceae 976|Bacteroidetes M esterase of the alpha-beta hydrolase superfamily - - - ko:K07001 - - - - ko00000 - - - Patatin PHJFGMMN_02496 269797.Mbar_A0316 0.000885 42.4 arCOG05130@1|root,arCOG05130@2157|Archaea,2XZ27@28890|Euryarchaeota 28890|Euryarchaeota - - - - - - - - - - - - - - - PHJFGMMN_02497 411477.PARMER_01820 9.45e-261 713.0 COG0673@1|root,COG0673@2|Bacteria,4NEQB@976|Bacteroidetes,2FPVB@200643|Bacteroidia,22YVW@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, C-terminal alpha/beta domain yvaA - 1.1.1.371 ko:K16044 ko00562,ko01120,map00562,map01120 - R09954 RC00182 ko00000,ko00001,ko01000 - - - GFO_IDH_MocA,GFO_IDH_MocA_C PHJFGMMN_02498 411477.PARMER_01821 1.28e-312 851.0 COG0112@1|root,COG0112@2|Bacteria,4NE30@976|Bacteroidetes,2FM07@200643|Bacteroidia,22WFH@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism glyA - 2.1.2.1 ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 M00140,M00141,M00346,M00532 R00945,R09099 RC00022,RC00112,RC01583,RC02958 ko00000,ko00001,ko00002,ko01000 - - - SHMT PHJFGMMN_02499 411477.PARMER_01823 0.0 1575.0 COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FNAR@200643|Bacteroidia,22WBH@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - CHB_HEX_C_1,Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b,PA14 PHJFGMMN_02500 411477.PARMER_01825 0.0 1641.0 COG3534@1|root,COG3534@2|Bacteria,4NGKW@976|Bacteroidetes,2G37N@200643|Bacteroidia,22XEV@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha-L-arabinofuranosidase C-terminal domain - - - - - - - - - - - - Alpha-L-AF_C,CBM_4_9,DUF1080 PHJFGMMN_02501 411477.PARMER_01827 9.83e-260 712.0 COG0642@1|root,COG3437@1|root,COG0642@2|Bacteria,COG3437@2|Bacteria,4PMUU@976|Bacteroidetes,2G0H5@200643|Bacteroidia,22WUE@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - 2.7.13.3 ko:K11527 - - - - ko00000,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA,Response_reg PHJFGMMN_02502 411477.PARMER_01828 1.18e-55 174.0 COG3039@1|root,COG3039@2|Bacteria,4NGW9@976|Bacteroidetes,2FQ99@200643|Bacteroidia,22WBT@171551|Porphyromonadaceae 976|Bacteroidetes L PFAM Transposase domain (DUF772) - - - - - - - - - - - - DDE_Tnp_1_2,DUF772 PHJFGMMN_02503 411477.PARMER_01829 7.97e-82 242.0 COG3039@1|root,COG3039@2|Bacteria,4NGW9@976|Bacteroidetes,2FQ99@200643|Bacteroidia,22WBT@171551|Porphyromonadaceae 976|Bacteroidetes L PFAM Transposase domain (DUF772) - - - - - - - - - - - - DDE_Tnp_1_2,DUF772 PHJFGMMN_02504 411477.PARMER_01832 4.17e-187 519.0 COG1216@1|root,COG1216@2|Bacteria,4NEHI@976|Bacteroidetes,2FM3A@200643|Bacteroidia,22WKN@171551|Porphyromonadaceae 976|Bacteroidetes S Dolichyl-phosphate beta-D-mannosyltransferase dpm1 - 2.4.1.83 ko:K00721 ko00510,ko01100,map00510,map01100 - R01009 RC00005 ko00000,ko00001,ko01000,ko01003 - GT2 - Glycos_transf_2 PHJFGMMN_02505 411477.PARMER_01833 0.0 2278.0 COG1197@1|root,COG1197@2|Bacteria,4NEPA@976|Bacteroidetes,2FP1Q@200643|Bacteroidia,22WFM@171551|Porphyromonadaceae 976|Bacteroidetes L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site mfd - - ko:K03723 ko03420,map03420 - - - ko00000,ko00001,ko01000,ko03400 - - - CarD_CdnL_TRCF,DEAD,Helicase_C,TRCF PHJFGMMN_02506 411477.PARMER_01834 0.0 1272.0 COG1022@1|root,COG1022@2|Bacteria,4NEA4@976|Bacteroidetes,2FNK9@200643|Bacteroidia,22XGE@171551|Porphyromonadaceae 976|Bacteroidetes I AMP-binding enzyme - - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding PHJFGMMN_02507 411477.PARMER_01835 0.0 971.0 COG0305@1|root,COG0305@2|Bacteria,4NF8P@976|Bacteroidetes,2FNG7@200643|Bacteroidia,22XCZ@171551|Porphyromonadaceae 976|Bacteroidetes L Participates in initiation and elongation during chromosome replication dnaB - 3.6.4.12 ko:K02314 ko03030,ko04112,map03030,map04112 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB,DnaB_C PHJFGMMN_02508 411477.PARMER_01837 0.0 1593.0 COG1629@1|root,COG4771@2|Bacteria,4PKE2@976|Bacteroidetes,2G3DZ@200643|Bacteroidia,22WQS@171551|Porphyromonadaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3 PHJFGMMN_02510 411477.PARMER_01840 0.0 924.0 COG0642@1|root,COG2205@2|Bacteria,4NIC6@976|Bacteroidetes,2FNX0@200643|Bacteroidia,2309I@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA PHJFGMMN_02511 411477.PARMER_01841 5.66e-159 446.0 COG0745@1|root,COG0745@2|Bacteria,4NGNK@976|Bacteroidetes,2FNUC@200643|Bacteroidia,22ZQ4@171551|Porphyromonadaceae 976|Bacteroidetes T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - - - - - - - - - - Response_reg,Trans_reg_C PHJFGMMN_02512 1122931.AUAE01000001_gene647 4.87e-46 149.0 2E3FD@1|root,32YE7@2|Bacteria,4NV0S@976|Bacteroidetes,2FUN0@200643|Bacteroidia,22YSC@171551|Porphyromonadaceae 976|Bacteroidetes S TSCPD domain - - - - - - - - - - - - TSCPD PHJFGMMN_02513 411477.PARMER_01843 1.03e-50 160.0 COG0724@1|root,COG0724@2|Bacteria,4P4WZ@976|Bacteroidetes,2G2C8@200643|Bacteroidia,230Z7@171551|Porphyromonadaceae 976|Bacteroidetes S RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - - - - - - - - - - RRM_1 PHJFGMMN_02514 411477.PARMER_01844 0.0 868.0 COG0285@1|root,COG0285@2|Bacteria,4NES8@976|Bacteroidetes,2FNFB@200643|Bacteroidia,22VZ3@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the folylpolyglutamate synthase family folC - 6.3.2.12,6.3.2.17 ko:K11754 ko00790,ko01100,map00790,map01100 M00126,M00841 R00942,R02237,R04241 RC00064,RC00090,RC00162 ko00000,ko00001,ko00002,ko01000 - - - Mur_ligase_M PHJFGMMN_02515 411477.PARMER_01846 0.0 945.0 COG2271@1|root,COG2271@2|Bacteria,4PKTC@976|Bacteroidetes,2G3HT@200643|Bacteroidia,23233@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator Superfamily - - - - - - - - - - - - MFS_1 PHJFGMMN_02516 411477.PARMER_01847 0.0 2071.0 COG5492@1|root,COG5492@2|Bacteria 2|Bacteria N domain, Protein - - - - - - - - - - - - FMN_bind,Flg_new,Glug,WxL PHJFGMMN_02517 1122931.AUAE01000011_gene1750 8.9e-49 164.0 2CC7R@1|root,334IS@2|Bacteria,4NX6W@976|Bacteroidetes,2FVDG@200643|Bacteroidia,231B8@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4469) with IG-like fold - - - - - - - - - - - - DUF4469,HU-DNA_bdg PHJFGMMN_02518 411477.PARMER_01849 3.71e-194 538.0 COG1947@1|root,COG1947@2|Bacteria,4NGFC@976|Bacteroidetes,2FM2B@200643|Bacteroidia,22X69@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol ispE GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 ko:K00919 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05634 RC00002,RC01439 ko00000,ko00001,ko00002,ko01000 - - - GHMP_kinases_C,GHMP_kinases_N PHJFGMMN_02519 411477.PARMER_01850 1.27e-141 399.0 COG0500@1|root,COG2226@2|Bacteria,4NV0Z@976|Bacteroidetes,2FV9K@200643|Bacteroidia,22YVQ@171551|Porphyromonadaceae 976|Bacteroidetes Q Mycolic acid cyclopropane synthetase - - - - - - - - - - - - Methyltransf_11,Methyltransf_23,Methyltransf_31 PHJFGMMN_02520 411477.PARMER_01851 0.0 1683.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NJW1@976|Bacteroidetes,2FNET@200643|Bacteroidia,22WN6@171551|Porphyromonadaceae 976|Bacteroidetes EU Peptidase, S9A B C family, catalytic domain protein - - - - - - - - - - - - PD40,Peptidase_S9 PHJFGMMN_02521 411477.PARMER_01852 2.82e-152 428.0 COG4845@1|root,COG4845@2|Bacteria,4NPDG@976|Bacteroidetes,2G3BI@200643|Bacteroidia,22XQK@171551|Porphyromonadaceae 976|Bacteroidetes V Chloramphenicol acetyltransferase cat - 2.3.1.28 ko:K19271 - - - - br01600,ko00000,ko01000,ko01504 - - - CAT PHJFGMMN_02522 411477.PARMER_01853 7.33e-241 663.0 COG0039@1|root,COG0039@2|Bacteria,4NEJ7@976|Bacteroidetes,2FNZ4@200643|Bacteroidia,22VZT@171551|Porphyromonadaceae 976|Bacteroidetes C Belongs to the LDH MDH superfamily mdh - 1.1.1.37 ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740 R00342,R07136 RC00031 ko00000,ko00001,ko00002,ko01000 - - - Ldh_1_C,Ldh_1_N PHJFGMMN_02523 411477.PARMER_01854 0.0 1234.0 COG1032@1|root,COG1032@2|Bacteria,4NGYA@976|Bacteroidetes,2FKYB@200643|Bacteroidia,22WXC@171551|Porphyromonadaceae 976|Bacteroidetes C UPF0313 protein - - - - - - - - - - - - DUF3362,Radical_SAM,Radical_SAM_N PHJFGMMN_02524 411477.PARMER_01855 3.57e-81 241.0 COG0251@1|root,COG0251@2|Bacteria,4NQ8M@976|Bacteroidetes,2FT8J@200643|Bacteroidia,22YB1@171551|Porphyromonadaceae 976|Bacteroidetes J Has endoribonuclease activity on mRNA - - 3.5.99.10 ko:K09022 - - R11098,R11099 RC03275,RC03354 ko00000,ko01000 - - - Ribonuc_L-PSP PHJFGMMN_02525 411477.PARMER_01856 2.08e-166 466.0 COG0566@1|root,COG0566@2|Bacteria,4NF6H@976|Bacteroidetes,2FMSI@200643|Bacteroidia,22X8Y@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family trmH - 2.1.1.185 ko:K03218,ko:K03437 - - - - ko00000,ko01000,ko03009,ko03016 - - - SpoU_methylase,SpoU_sub_bind PHJFGMMN_02526 411477.PARMER_01857 6.52e-98 285.0 2C5N5@1|root,32XD8@2|Bacteria,4PQ0Y@976|Bacteroidetes,2G1BD@200643|Bacteroidia,230ZX@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02528 411477.PARMER_01860 0.0 999.0 COG0497@1|root,COG0497@2|Bacteria,4NE3I@976|Bacteroidetes,2FMIG@200643|Bacteroidia,22W29@171551|Porphyromonadaceae 976|Bacteroidetes L May be involved in recombinational repair of damaged DNA recN - - ko:K03631 - - - - ko00000,ko03400 - - - SMC_N PHJFGMMN_02529 411477.PARMER_01861 1.31e-214 592.0 28HA8@1|root,2Z7MQ@2|Bacteria,4NEJD@976|Bacteroidetes,2FP92@200643|Bacteroidia,22WNR@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4835) - - - - - - - - - - - - DUF4835 PHJFGMMN_02530 411477.PARMER_01862 4.02e-264 726.0 COG0452@1|root,COG0452@2|Bacteria,4NE46@976|Bacteroidetes,2FNDG@200643|Bacteroidia,22X4T@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine coaBC - 4.1.1.36,6.3.2.5 ko:K13038 ko00770,ko01100,map00770,map01100 M00120 R03269,R04231 RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000 - - - DFP,Flavoprotein PHJFGMMN_02531 411477.PARMER_01863 4.32e-280 765.0 COG1979@1|root,COG1979@2|Bacteria,4NF1D@976|Bacteroidetes,2FPAW@200643|Bacteroidia,22W7C@171551|Porphyromonadaceae 976|Bacteroidetes C alcohol dehydrogenase yqhD - - ko:K08325 ko00640,map00640 - R02528 RC00739 ko00000,ko00001,ko01000 - - - Fe-ADH PHJFGMMN_02532 411477.PARMER_01864 4e-187 519.0 COG0847@1|root,COG0847@2|Bacteria,4NE82@976|Bacteroidetes,2FMQF@200643|Bacteroidia,22WYR@171551|Porphyromonadaceae 976|Bacteroidetes L DNA polymerase III subunit epsilon dnaQ - 2.7.7.7 ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - RNase_T PHJFGMMN_02533 411477.PARMER_01865 4.18e-262 719.0 COG0592@1|root,COG0592@2|Bacteria,4NESB@976|Bacteroidetes,2FMPF@200643|Bacteroidia,22X93@171551|Porphyromonadaceae 976|Bacteroidetes L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria dnaN - 2.7.7.7 ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_beta,DNA_pol3_beta_2,DNA_pol3_beta_3 PHJFGMMN_02534 1235803.C825_04915 1.58e-27 99.8 2E359@1|root,32Y58@2|Bacteria,4NUXM@976|Bacteroidetes,2FUJX@200643|Bacteroidia,22YQ0@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4295) - - - - - - - - - - - - DUF4295 PHJFGMMN_02535 411477.PARMER_01868 2.46e-36 122.0 COG0267@1|root,COG0267@2|Bacteria,4NURM@976|Bacteroidetes,2FTST@200643|Bacteroidia,22YNB@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bL33 family rpmG - - ko:K02913 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L33 PHJFGMMN_02536 411477.PARMER_01869 1.27e-50 160.0 COG0227@1|root,COG0227@2|Bacteria,4NS7Q@976|Bacteroidetes,2FTTQ@200643|Bacteroidia,22YGD@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bL28 family rpmB GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02902 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L28 PHJFGMMN_02537 411477.PARMER_01871 3.58e-300 819.0 COG1807@1|root,COG1807@2|Bacteria,4NWIP@976|Bacteroidetes,2FUZZ@200643|Bacteroidia 976|Bacteroidetes M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - - - - - - - - - - PMT_2 PHJFGMMN_02538 411477.PARMER_01872 3.61e-144 406.0 COG3560@1|root,COG3560@2|Bacteria,4NJPC@976|Bacteroidetes,2FMUS@200643|Bacteroidia,22Z8F@171551|Porphyromonadaceae 976|Bacteroidetes S Nitroreductase family - - - ko:K07078 - - - - ko00000 - - - Nitroreductase PHJFGMMN_02539 411477.PARMER_01873 0.0 884.0 COG1249@1|root,COG1249@2|Bacteria,4NDVC@976|Bacteroidetes,2FM8Y@200643|Bacteroidia,22WRR@171551|Porphyromonadaceae 976|Bacteroidetes C Dihydrolipoyl dehydrogenase lpdA - 1.8.1.4 ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00036,M00307,M00532 R00209,R01221,R01698,R03815,R07618,R08549 RC00004,RC00022,RC00583,RC02742,RC02833,RC02834 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 - - - Pyr_redox_2,Pyr_redox_dim PHJFGMMN_02540 411477.PARMER_01874 3.69e-178 496.0 COG0095@1|root,COG0095@2|Bacteria,4NE5F@976|Bacteroidetes,2FMDJ@200643|Bacteroidia,22Y4W@171551|Porphyromonadaceae 976|Bacteroidetes H Lipoate-protein ligase lplA - 6.3.1.20 ko:K03800 ko00785,ko01100,map00785,map01100 - R07770,R07771,R11143 RC00043,RC00070,RC00090,RC00992,RC02896 ko00000,ko00001,ko01000 - - - BPL_LplA_LipB,Lip_prot_lig_C PHJFGMMN_02541 411477.PARMER_01875 1.75e-310 848.0 COG0508@1|root,COG0508@2|Bacteria,4NED0@976|Bacteroidetes,2FNQF@200643|Bacteroidia,22XWE@171551|Porphyromonadaceae 976|Bacteroidetes C 2-oxoacid dehydrogenases acyltransferase (catalytic domain) bfmBB - 2.3.1.61 ko:K00658 ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00032 R02570,R02571,R08549 RC00004,RC02727,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - 2-oxoacid_dh,Biotin_lipoyl,E3_binding PHJFGMMN_02542 411477.PARMER_01877 0.0 1371.0 COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,4NE71@976|Bacteroidetes,2FQB7@200643|Bacteroidia,22WIK@171551|Porphyromonadaceae 976|Bacteroidetes C Dehydrogenase E1 component bfmBAB - 1.2.4.4 ko:K11381 ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130 M00036 R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00027,RC00627,RC02743,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh,Transket_pyr,Transketolase_C PHJFGMMN_02543 411477.PARMER_01878 6.23e-118 337.0 COG0716@1|root,COG0716@2|Bacteria,4NP3J@976|Bacteroidetes,2FT0W@200643|Bacteroidia,2308X@171551|Porphyromonadaceae 976|Bacteroidetes C Low-potential electron donor to a number of redox enzymes isiB - - ko:K03839 - - - - ko00000 - - - Flavodoxin_1 PHJFGMMN_02544 411477.PARMER_01879 6.13e-302 824.0 COG1538@1|root,COG1538@2|Bacteria,4NKK6@976|Bacteroidetes,2FP9K@200643|Bacteroidia,22WHA@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP PHJFGMMN_02545 411477.PARMER_01880 0.0 1937.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FMG1@200643|Bacteroidia,22W2A@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran PHJFGMMN_02546 411477.PARMER_01881 1.58e-227 629.0 COG0845@1|root,COG0845@2|Bacteria,4NIZF@976|Bacteroidetes,2FN5T@200643|Bacteroidia,22Y8A@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 PHJFGMMN_02547 411477.PARMER_01882 1.26e-218 604.0 COG1864@1|root,COG1864@2|Bacteria,4NFYJ@976|Bacteroidetes,2FNBK@200643|Bacteroidia,22XS4@171551|Porphyromonadaceae 976|Bacteroidetes F DNA/RNA non-specific endonuclease nucA_1 - - ko:K01173 ko04210,map04210 - - - ko00000,ko00001,ko03029 - - - Endonuclease_NS PHJFGMMN_02548 411477.PARMER_01883 1.11e-160 449.0 COG1272@1|root,COG1272@2|Bacteria,4NM95@976|Bacteroidetes,2FPGK@200643|Bacteroidia,22Y04@171551|Porphyromonadaceae 976|Bacteroidetes S Haemolysin-III related hly-III - - ko:K11068 - - - - ko00000,ko02042 - - - HlyIII PHJFGMMN_02549 411477.PARMER_01884 1.98e-40 133.0 COG2608@1|root,COG2608@2|Bacteria,4P9HM@976|Bacteroidetes,2FVA2@200643|Bacteroidia,22Z0Y@171551|Porphyromonadaceae 976|Bacteroidetes P mercury ion transmembrane transporter activity - - - - - - - - - - - - HMA PHJFGMMN_02550 411477.PARMER_01885 0.0 1394.0 COG2217@1|root,COG2217@2|Bacteria,4NERS@976|Bacteroidetes,2FNJA@200643|Bacteroidia,22WCT@171551|Porphyromonadaceae 976|Bacteroidetes P Copper-exporting ATPase copA - 3.6.3.4,3.6.3.54 ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 - R00086 RC00002 ko00000,ko00001,ko01000 3.A.3.5 - - E1-E2_ATPase,HMA,Hydrolase PHJFGMMN_02551 411477.PARMER_01886 2.63e-108 311.0 COG2731@1|root,COG2731@2|Bacteria,4NQU1@976|Bacteroidetes,2G2E1@200643|Bacteroidia,22Y5R@171551|Porphyromonadaceae 976|Bacteroidetes G YhcH YjgK YiaL family protein - - - - - - - - - - - - DUF386 PHJFGMMN_02554 411477.PARMER_01888 1.6e-269 737.0 COG0589@1|root,COG0589@2|Bacteria,4NHBB@976|Bacteroidetes,2FPV4@200643|Bacteroidia,22WRT@171551|Porphyromonadaceae 976|Bacteroidetes T Belongs to the universal stress protein A family uspA - - - - - - - - - - - DUF2007,Usp PHJFGMMN_02555 411477.PARMER_01889 1.42e-68 207.0 2CZWI@1|root,32T79@2|Bacteria,4NSNW@976|Bacteroidetes,2FTY4@200643|Bacteroidia,22YDH@171551|Porphyromonadaceae 976|Bacteroidetes S DNA-binding protein - - - - - - - - - - - - - PHJFGMMN_02556 411477.PARMER_01890 2.59e-161 452.0 COG0671@1|root,COG0671@2|Bacteria,4NNVQ@976|Bacteroidetes,2FRKS@200643|Bacteroidia,22XWM@171551|Porphyromonadaceae 976|Bacteroidetes I Acid phosphatase homologues - - 3.6.1.27 ko:K19302 ko00550,map00550 - R05627 RC00002 ko00000,ko00001,ko01000,ko01011 - - - PAP2 PHJFGMMN_02557 411477.PARMER_01891 2.71e-181 505.0 COG0457@1|root,COG0457@2|Bacteria,4NF5V@976|Bacteroidetes,2FP54@200643|Bacteroidia,22XN2@171551|Porphyromonadaceae 976|Bacteroidetes T Tetratricopeptide repeat batE - - - - - - - - - - - SH3_3,SH3_4,TPR_1,TPR_11,TPR_16,TPR_2 PHJFGMMN_02558 411477.PARMER_01892 0.0 1168.0 COG0457@1|root,COG0457@2|Bacteria,4NERG@976|Bacteroidetes,2FMK5@200643|Bacteroidia,22X3E@171551|Porphyromonadaceae 976|Bacteroidetes S Oxygen tolerance batD - - - - - - - - - - - BatD,TPR_2 PHJFGMMN_02559 411477.PARMER_01893 1.46e-114 335.0 COG0457@1|root,COG0457@2|Bacteria,4NH2K@976|Bacteroidetes,2FN6E@200643|Bacteroidia,22XZA@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat batC - - - - - - - - - - - TPR_1,TPR_11,TPR_16,TPR_2,TPR_8 PHJFGMMN_02560 411477.PARMER_01894 4.32e-235 647.0 COG2304@1|root,COG2304@2|Bacteria,4NF7Y@976|Bacteroidetes,2FN4B@200643|Bacteroidia,22WPY@171551|Porphyromonadaceae 976|Bacteroidetes S Von Willebrand factor type A domain batB - - ko:K07114 - - - - ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 - - BatA,VWA,VWA_2 PHJFGMMN_02561 411477.PARMER_01895 2.36e-222 614.0 COG2304@1|root,COG2304@2|Bacteria,4NDUC@976|Bacteroidetes,2FNXM@200643|Bacteroidia,22XC0@171551|Porphyromonadaceae 976|Bacteroidetes S Von Willebrand factor type A domain batA - - ko:K07114 - - - - ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 - - BatA,VWA PHJFGMMN_02562 411477.PARMER_01896 9.42e-234 644.0 COG3088@1|root,COG3088@2|Bacteria,4NGHU@976|Bacteroidetes,2FP8Y@200643|Bacteroidia,22XR6@171551|Porphyromonadaceae 976|Bacteroidetes O Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - PHJFGMMN_02563 411477.PARMER_01897 2.62e-204 565.0 COG1721@1|root,COG1721@2|Bacteria,4NE2N@976|Bacteroidetes,2FNSY@200643|Bacteroidia,22WCY@171551|Porphyromonadaceae 976|Bacteroidetes S protein (some members contain a von Willebrand factor type A (vWA) domain) - - - - - - - - - - - - DUF58 PHJFGMMN_02564 411477.PARMER_01898 7.64e-225 621.0 COG0714@1|root,COG0714@2|Bacteria,4NDVZ@976|Bacteroidetes,2FMGP@200643|Bacteroidia,22W2U@171551|Porphyromonadaceae 976|Bacteroidetes S ATPase family associated with various cellular activities (AAA) moxR - - ko:K03924 - - - - ko00000,ko01000 - - - AAA_3 PHJFGMMN_02565 411477.PARMER_01899 9.94e-250 688.0 COG0776@1|root,COG1652@1|root,COG0776@2|Bacteria,COG1652@2|Bacteria,4NQVM@976|Bacteroidetes,2G047@200643|Bacteroidia,22Y7D@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the bacterial histone-like protein family - - - - - - - - - - - - Bac_DNA_binding,LysM PHJFGMMN_02566 411477.PARMER_01900 3.54e-61 188.0 COG0776@1|root,COG0776@2|Bacteria,4NV7A@976|Bacteroidetes,2FTT5@200643|Bacteroidia,22YSI@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the bacterial histone-like protein family himA - - ko:K03530,ko:K04764 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding PHJFGMMN_02567 411477.PARMER_01901 0.0 872.0 COG0621@1|root,COG0621@2|Bacteria,4NEJK@976|Bacteroidetes,2FMEW@200643|Bacteroidia,22W8G@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 rimO - 2.8.4.4 ko:K14441 - - R10652 RC00003,RC03217 ko00000,ko01000,ko03009 - - - Radical_SAM,TRAM,UPF0004 PHJFGMMN_02568 411477.PARMER_01902 1.86e-218 603.0 COG0552@1|root,COG0552@2|Bacteria,4NE9Z@976|Bacteroidetes,2FMMT@200643|Bacteroidia,22VZH@171551|Porphyromonadaceae 976|Bacteroidetes U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) ftsY - - ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2,3.A.5.7 - - SRP54,SRP54_N PHJFGMMN_02569 999419.HMPREF1077_02787 4.01e-283 772.0 COG0019@1|root,COG0019@2|Bacteria,4NEN0@976|Bacteroidetes,2FNN3@200643|Bacteroidia,22X37@171551|Porphyromonadaceae 976|Bacteroidetes E carboxynorspermidine decarboxylase nspC - 4.1.1.96 ko:K13747 ko00330,ko01100,map00330,map01100 - R09081,R09082 RC00299 ko00000,ko00001,ko01000 - - - Orn_Arg_deC_N,Orn_DAP_Arg_deC PHJFGMMN_02570 411477.PARMER_01905 3.39e-78 233.0 COG3682@1|root,COG3682@2|Bacteria,4NNVM@976|Bacteroidetes,2FSXD@200643|Bacteroidia,231D5@171551|Porphyromonadaceae 976|Bacteroidetes K Penicillinase repressor - - - - - - - - - - - - Penicillinase_R PHJFGMMN_02571 411477.PARMER_01906 0.0 869.0 COG0810@1|root,COG4219@1|root,COG0810@2|Bacteria,COG4219@2|Bacteria,4NDWS@976|Bacteroidetes,2FNCU@200643|Bacteroidia,22Z8I@171551|Porphyromonadaceae 976|Bacteroidetes KMT BlaR1 peptidase M56 - - - - - - - - - - - - CarbopepD_reg_2,Peptidase_M56,Plug,TonB_C PHJFGMMN_02572 411477.PARMER_01907 0.0 1551.0 COG3408@1|root,COG3408@2|Bacteria,4NF9P@976|Bacteroidetes,2FMN5@200643|Bacteroidia,22ZGB@171551|Porphyromonadaceae 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase C-terminal domain - - - - - - - - - - - - Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N PHJFGMMN_02573 411477.PARMER_01908 0.0 1772.0 COG3408@1|root,COG3408@2|Bacteria,4NESP@976|Bacteroidetes,2FMGH@200643|Bacteroidia,22X2T@171551|Porphyromonadaceae 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - 3.2.1.40 ko:K05989 - - - - ko00000,ko01000 - - - Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N PHJFGMMN_02574 411477.PARMER_01909 0.0 1189.0 COG3408@1|root,COG3408@2|Bacteria,4NHST@976|Bacteroidetes,2FQ71@200643|Bacteroidia,22X65@171551|Porphyromonadaceae 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - - - - - - - - - - Bac_rhamnosid6H,Bac_rhamnosid_C PHJFGMMN_02575 411477.PARMER_01910 3.06e-196 543.0 COG0235@1|root,COG0235@2|Bacteria,4NIQK@976|Bacteroidetes,2FN5U@200643|Bacteroidia,22WSD@171551|Porphyromonadaceae 976|Bacteroidetes G Class II Aldolase and Adducin N-terminal domain rhaD GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009056,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0019321,GO:0019323,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0071704,GO:1901575 4.1.2.19 ko:K01629 ko00040,ko00051,ko01120,map00040,map00051,map01120 - R01785,R02263 RC00438,RC00599,RC00603,RC00604 ko00000,ko00001,ko01000 - - - Aldolase_II PHJFGMMN_02576 411477.PARMER_01911 3.46e-242 665.0 COG0697@1|root,2Z7ID@2|Bacteria,4NEHB@976|Bacteroidetes,2FN7F@200643|Bacteroidia,22X45@171551|Porphyromonadaceae 976|Bacteroidetes EG L-rhamnose-proton symport protein (RhaT) rhaT - - ko:K02856 - - - - ko00000,ko02000 2.A.7.6 - - RhaT PHJFGMMN_02577 411477.PARMER_01912 6.81e-313 851.0 COG4806@1|root,COG4806@2|Bacteria,4NHKW@976|Bacteroidetes,2FNVS@200643|Bacteroidia,22W7A@171551|Porphyromonadaceae 976|Bacteroidetes G L-rhamnose isomerase (RhaA) rhaA GO:0003674,GO:0003824,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0008740,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0019321,GO:0019324,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 5.3.1.14 ko:K01813 ko00051,ko01120,map00051,map01120 - R02437 RC00434 ko00000,ko00001,ko01000 - - - RhaA PHJFGMMN_02578 999419.HMPREF1077_02732 0.0 951.0 COG1070@1|root,COG1070@2|Bacteria,4NIJC@976|Bacteroidetes,2FP4C@200643|Bacteroidia,22X3Q@171551|Porphyromonadaceae 976|Bacteroidetes G FGGY family of carbohydrate kinases, N-terminal domain rhaB GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009056,GO:0016052,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 2.7.1.5,2.7.1.51 ko:K00848,ko:K00879 ko00040,ko00051,ko01120,map00040,map00051,map01120 - R01902,R03014,R03241 RC00002,RC00017 ko00000,ko00001,ko01000 - - - FGGY_C,FGGY_N PHJFGMMN_02579 411477.PARMER_01915 3.56e-234 644.0 COG4977@1|root,COG4977@2|Bacteria,4P1XK@976|Bacteroidetes,2FMGD@200643|Bacteroidia,22XTF@171551|Porphyromonadaceae 976|Bacteroidetes K AraC-like ligand binding domain - - - - - - - - - - - - AraC_binding,HTH_18 PHJFGMMN_02580 411477.PARMER_01916 6.63e-80 237.0 COG2246@1|root,COG2246@2|Bacteria,4NVF9@976|Bacteroidetes,2FSJT@200643|Bacteroidia,231R3@171551|Porphyromonadaceae 976|Bacteroidetes S GtrA-like protein - - - - - - - - - - - - GtrA PHJFGMMN_02581 411477.PARMER_01917 1.56e-132 375.0 COG0526@1|root,COG0526@2|Bacteria,4NW7T@976|Bacteroidetes,2FTAZ@200643|Bacteroidia 976|Bacteroidetes CO Antioxidant, AhpC TSA family - - - - - - - - - - - - AhpC-TSA,Redoxin PHJFGMMN_02582 411477.PARMER_01918 1.43e-203 564.0 COG0329@1|root,COG0329@2|Bacteria,4NFP9@976|Bacteroidetes,2FMFC@200643|Bacteroidia,22WYN@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) dapA - 4.3.3.7 ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R10147 RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 - - - DHDPS PHJFGMMN_02583 999419.HMPREF1077_03067 2.49e-110 318.0 2ENX1@1|root,33GHZ@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - PHJFGMMN_02584 411477.PARMER_01920 0.0 1309.0 COG0272@1|root,COG0272@2|Bacteria,4NE2X@976|Bacteroidetes,2FKZZ@200643|Bacteroidia,22WHC@171551|Porphyromonadaceae 976|Bacteroidetes L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA ligA GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 - R00382 RC00005 ko00000,ko00001,ko01000,ko03032,ko03400 - - - BRCT,DNA_ligase_OB,DNA_ligase_ZBD,DNA_ligase_aden,HHH_2,HHH_5 PHJFGMMN_02585 411477.PARMER_01921 4.55e-237 652.0 28HM4@1|root,2Z7VS@2|Bacteria,4NGBW@976|Bacteroidetes,2FPDI@200643|Bacteroidia,22WES@171551|Porphyromonadaceae 976|Bacteroidetes S Putative carbohydrate metabolism domain - - - - - - - - - - - - PCMD PHJFGMMN_02586 411477.PARMER_01922 1.38e-277 757.0 2BWJ3@1|root,2Z8E8@2|Bacteria,4NI7Z@976|Bacteroidetes,2FNX1@200643|Bacteroidia,22X7I@171551|Porphyromonadaceae 976|Bacteroidetes S Sulfotransferase family - - - - - - - - - - - - Sulfotransfer_3 PHJFGMMN_02587 411477.PARMER_01923 0.0 968.0 COG2895@1|root,COG2895@2|Bacteria,4NETI@976|Bacteroidetes,2FP06@200643|Bacteroidia,22X3Y@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily cysN GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0044237 2.7.1.25,2.7.7.4 ko:K00955,ko:K00956 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 M00176,M00596 R00509,R00529,R04928,R04929 RC00002,RC00078,RC02809,RC02889 ko00000,ko00001,ko00002,ko01000 - - - APS_kinase,GTP_EFTU PHJFGMMN_02588 411477.PARMER_01924 7.37e-222 611.0 COG0175@1|root,COG0175@2|Bacteria,4NEPD@976|Bacteroidetes,2FM2X@200643|Bacteroidia,22WIA@171551|Porphyromonadaceae 976|Bacteroidetes H COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase cysD - 2.7.7.4 ko:K00957 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 M00176,M00596 R00529,R04929 RC02809,RC02889 ko00000,ko00001,ko00002,ko01000 - - - PAPS_reduct PHJFGMMN_02589 411477.PARMER_01925 5.23e-152 427.0 COG0529@1|root,COG0529@2|Bacteria,4NGCU@976|Bacteroidetes,2FMA4@200643|Bacteroidia,22XG5@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the synthesis of activated sulfate cysC GO:0003674,GO:0003824,GO:0004020,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237 2.7.1.25 ko:K00860 ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120 M00176 R00509,R04928 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - APS_kinase PHJFGMMN_02590 411477.PARMER_01926 9.28e-77 229.0 2CCSR@1|root,32RWC@2|Bacteria,4NSDM@976|Bacteroidetes,2FU2H@200643|Bacteroidia,22YEI@171551|Porphyromonadaceae 976|Bacteroidetes S 23S rRNA-intervening sequence protein - - - - - - - - - - - - 23S_rRNA_IVP PHJFGMMN_02591 411477.PARMER_01927 0.0 1000.0 COG0471@1|root,COG0471@2|Bacteria,4NF52@976|Bacteroidetes,2FNWH@200643|Bacteroidia,22X6C@171551|Porphyromonadaceae 976|Bacteroidetes P Citrate transporter - - - - - - - - - - - - CitMHS,TrkA_C PHJFGMMN_02592 411477.PARMER_01928 3.06e-199 551.0 COG1218@1|root,COG1218@2|Bacteria,4NFHY@976|Bacteroidetes,2FP00@200643|Bacteroidia,22X12@171551|Porphyromonadaceae 976|Bacteroidetes P Inositol monophosphatase family cysQ - 3.1.3.7 ko:K01082 ko00920,ko01100,ko01120,ko01130,map00920,map01100,map01120,map01130 - R00188,R00508 RC00078 ko00000,ko00001,ko01000,ko03016 - - - Inositol_P PHJFGMMN_02593 411477.PARMER_01929 3.63e-215 593.0 COG4667@1|root,COG4667@2|Bacteria,4NIX2@976|Bacteroidetes,2FM09@200643|Bacteroidia,22WX4@171551|Porphyromonadaceae 976|Bacteroidetes S Patatin-like phospholipase - - - - - - - - - - - - Patatin PHJFGMMN_02594 411477.PARMER_01930 3.88e-239 657.0 COG1052@1|root,COG1052@2|Bacteria,4NF1R@976|Bacteroidetes,2FMNY@200643|Bacteroidia,22WSN@171551|Porphyromonadaceae 976|Bacteroidetes CH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ldhA - 1.1.1.28 ko:K03778 ko00620,ko01120,map00620,map01120 - R00704 RC00044 ko00000,ko00001,ko01000 - - - 2-Hacid_dh,2-Hacid_dh_C PHJFGMMN_02595 411477.PARMER_01932 1.14e-275 754.0 COG0642@1|root,COG0642@2|Bacteria,4PM6U@976|Bacteroidetes,2G0H6@200643|Bacteroidia,22XUP@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HAMP,HATPase_c,HisKA PHJFGMMN_02596 411477.PARMER_01933 1.39e-158 444.0 COG0745@1|root,COG0745@2|Bacteria,4NHXA@976|Bacteroidetes,2G2YZ@200643|Bacteroidia,22XSA@171551|Porphyromonadaceae 976|Bacteroidetes T Transcriptional regulatory protein, C terminal cusR - - ko:K07665 ko02020,map02020 M00452,M00745 - - ko00000,ko00001,ko00002,ko01504,ko02022 - - - Response_reg,Trans_reg_C PHJFGMMN_02597 411477.PARMER_01934 8.11e-109 313.0 COG0797@1|root,COG0797@2|Bacteria,4NSF1@976|Bacteroidetes,2FTUH@200643|Bacteroidia,230ZE@171551|Porphyromonadaceae 976|Bacteroidetes M Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides rlpA - - ko:K03642 - - - - ko00000 - - - DPBB_1 PHJFGMMN_02598 411477.PARMER_01935 0.0 925.0 COG1858@1|root,COG1858@2|Bacteria,4NE4P@976|Bacteroidetes,2FMPS@200643|Bacteroidia 976|Bacteroidetes C Psort location Periplasmic, score ccp - 1.11.1.5 ko:K00428 - - - - ko00000,ko01000 - - - CCP_MauG,Cytochrom_C,Haem_bd PHJFGMMN_02599 411477.PARMER_01936 1.24e-173 484.0 COG4464@1|root,COG4464@2|Bacteria,4NMUT@976|Bacteroidetes,2FNRW@200643|Bacteroidia,22YBK@171551|Porphyromonadaceae 976|Bacteroidetes GM COG4464 Capsular polysaccharide biosynthesis protein - - - - - - - - - - - - - PHJFGMMN_02600 411477.PARMER_01937 0.0 1458.0 COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,4NEXU@976|Bacteroidetes,2FM9K@200643|Bacteroidia,22W6W@171551|Porphyromonadaceae 976|Bacteroidetes DM Chain length determinant protein - - - - - - - - - - - - AAA_31,CbiA,GNVR,Wzz PHJFGMMN_02601 411477.PARMER_01938 2.12e-178 497.0 COG1596@1|root,COG1596@2|Bacteria,4NNJT@976|Bacteroidetes,2FMYU@200643|Bacteroidia,22XV5@171551|Porphyromonadaceae 976|Bacteroidetes M Polysaccharide biosynthesis/export protein - - - ko:K01991 ko02026,map02026 - - - ko00000,ko00001,ko02000 1.B.18 - - Poly_export,SLBB PHJFGMMN_02602 411477.PARMER_01939 4.25e-289 790.0 2C62B@1|root,33R47@2|Bacteria,4P1U4@976|Bacteroidetes,2FQ3F@200643|Bacteroidia,22YZW@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG33609 non supervised orthologous group - - - - - - - - - - - - CarboxypepD_reg PHJFGMMN_02603 411477.PARMER_01940 0.0 1038.0 2EBRM@1|root,335RI@2|Bacteria,4NWNB@976|Bacteroidetes,2FQ3N@200643|Bacteroidia 976|Bacteroidetes S Exopolysaccharide biosynthesis protein YbjH - - - - - - - - - - - - YjbH PHJFGMMN_02605 411477.PARMER_01942 1.88e-291 795.0 COG0358@1|root,COG0358@2|Bacteria,4NENT@976|Bacteroidetes,2FMV1@200643|Bacteroidia,22WQI@171551|Porphyromonadaceae 976|Bacteroidetes L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication dnaG - - ko:K02316 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB_bind,Toprim_2,Toprim_4,Toprim_N,zf-CHC2 PHJFGMMN_02606 411477.PARMER_01943 0.0 909.0 COG0305@1|root,COG0305@2|Bacteria,4NF8P@976|Bacteroidetes,2FNG7@200643|Bacteroidia,22XCZ@171551|Porphyromonadaceae 976|Bacteroidetes L Participates in initiation and elongation during chromosome replication dnaB - 3.6.4.12 ko:K02314 ko03030,ko04112,map03030,map04112 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB,DnaB_C PHJFGMMN_02609 411477.PARMER_01947 2.93e-97 283.0 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation - - - - - - - - - - - - Bac_DNA_binding PHJFGMMN_02610 411477.PARMER_01948 5.68e-110 316.0 COG1705@1|root,COG1705@2|Bacteria 2|Bacteria NU amidase activity - - - ko:K02395 - - - - ko00000,ko02035 - - - Glucosaminidase,Rod-binding PHJFGMMN_02612 411477.PARMER_01951 1.66e-311 847.0 COG0399@1|root,COG0399@2|Bacteria,4NFAI@976|Bacteroidetes,2FN8X@200643|Bacteroidia,22X99@171551|Porphyromonadaceae 976|Bacteroidetes E DegT/DnrJ/EryC1/StrS aminotransferase family pglE - - - - - - - - - - - DegT_DnrJ_EryC1 PHJFGMMN_02613 411477.PARMER_01952 1.29e-154 434.0 COG1011@1|root,COG1011@2|Bacteria,4NQJ0@976|Bacteroidetes,2FXI0@200643|Bacteroidia 976|Bacteroidetes S Haloacid dehalogenase-like hydrolase - - - ko:K07025 - - - - ko00000 - - - HAD_2 PHJFGMMN_02614 411477.PARMER_01953 3.71e-236 649.0 COG0189@1|root,COG0189@2|Bacteria,4NHX0@976|Bacteroidetes 976|Bacteroidetes HJ ATP-grasp domain - - 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - ATP-grasp_3 PHJFGMMN_02615 411477.PARMER_01954 2.53e-253 696.0 COG0438@1|root,COG0438@2|Bacteria,4PI59@976|Bacteroidetes,2G27Q@200643|Bacteroidia,2317A@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 PHJFGMMN_02616 411477.PARMER_01955 7.27e-145 408.0 COG2148@1|root,COG2148@2|Bacteria,4NF29@976|Bacteroidetes,2FNGF@200643|Bacteroidia,22XRS@171551|Porphyromonadaceae 976|Bacteroidetes M Bacterial sugar transferase pglC - 2.7.8.36 ko:K15915 - - R10184 RC00002 ko00000,ko01000 - - - Bac_transf PHJFGMMN_02617 411477.PARMER_01956 1.18e-273 748.0 COG0438@1|root,COG0438@2|Bacteria,4NEX8@976|Bacteroidetes,2FNR2@200643|Bacteroidia,22YP2@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferase 4-like - - - - - - - - - - - - Glyco_trans_4_2,Glyco_trans_4_4,Glycos_transf_1 PHJFGMMN_02619 411477.PARMER_01957 1.1e-192 538.0 COG1835@1|root,COG1835@2|Bacteria,4NT5Q@976|Bacteroidetes 976|Bacteroidetes I Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - Acyl_transf_3 PHJFGMMN_02620 411477.PARMER_01959 3.04e-258 707.0 COG0438@1|root,COG0438@2|Bacteria,4NG90@976|Bacteroidetes,2FUTP@200643|Bacteroidia,22ZZD@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase Family 4 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 PHJFGMMN_02621 411477.PARMER_01960 1.38e-131 373.0 COG1045@1|root,COG1045@2|Bacteria,4NJ0X@976|Bacteroidetes 976|Bacteroidetes E serine acetyltransferase - - 2.3.1.30 ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 M00021 R00586 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 - - - Hexapep PHJFGMMN_02622 411477.PARMER_01961 1.19e-233 641.0 COG0463@1|root,COG0463@2|Bacteria,4NGTD@976|Bacteroidetes,2FPNS@200643|Bacteroidia,22ZF2@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase like family 2 - - - - - - - - - - - - Glycos_transf_2 PHJFGMMN_02623 411477.PARMER_01962 9.99e-270 737.0 28IAS@1|root,2Z8DC@2|Bacteria,4NFA2@976|Bacteroidetes,2FSGV@200643|Bacteroidia,230BV@171551|Porphyromonadaceae 976|Bacteroidetes S EpsG family - - - - - - - - - - - - EpsG PHJFGMMN_02624 411477.PARMER_01963 3.59e-194 536.0 COG3774@1|root,COG3774@2|Bacteria,4NJH2@976|Bacteroidetes,2FSNZ@200643|Bacteroidia,230FG@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase sugar-binding region containing DXD motif - - 2.7.8.12 ko:K09809 - - - - ko00000,ko01000 - - - Gb3_synth,Gly_transf_sug PHJFGMMN_02625 411477.PARMER_01965 7.09e-294 801.0 COG0438@1|root,COG0438@2|Bacteria,4NSKC@976|Bacteroidetes,2FNF6@200643|Bacteroidia,22ZWP@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferases group 1 - - - - - - - - - - - - Glycos_transf_1 PHJFGMMN_02626 411477.PARMER_01966 2.08e-266 728.0 COG1216@1|root,COG1216@2|Bacteria,4NKPU@976|Bacteroidetes,2FTBZ@200643|Bacteroidia,23241@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyltransferase, group 2 family protein - - - - - - - - - - - - Glyco_transf_8,Glycos_transf_2 PHJFGMMN_02627 411477.PARMER_01967 1.71e-315 859.0 COG1004@1|root,COG1004@2|Bacteria,4NE00@976|Bacteroidetes,2FMZ9@200643|Bacteroidia,22WMK@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - 1.1.1.22 ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 M00014,M00129,M00361,M00362 R00286 RC00291 ko00000,ko00001,ko00002,ko01000 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N PHJFGMMN_02628 411477.PARMER_01968 3.16e-177 493.0 COG0110@1|root,COG0110@2|Bacteria 2|Bacteria S O-acyltransferase activity - - - - - - - - - - - - Acetyltransf_6,Fer4_7,FrhB_FdhB_C,Hexapep PHJFGMMN_02629 411477.PARMER_01969 0.0 971.0 COG2244@1|root,COG2244@2|Bacteria,4NHYC@976|Bacteroidetes,2FQKS@200643|Bacteroidia,22Z93@171551|Porphyromonadaceae 976|Bacteroidetes S Polysaccharide biosynthesis protein - - - - - - - - - - - - Polysacc_synt,Polysacc_synt_C PHJFGMMN_02630 411477.PARMER_01970 1.74e-228 630.0 COG1256@1|root,COG1256@2|Bacteria,4NP7S@976|Bacteroidetes,2FSDB@200643|Bacteroidia,23044@171551|Porphyromonadaceae 976|Bacteroidetes N Domain of unknown function (DUF4407) - - - - - - - - - - - - DUF4407 PHJFGMMN_02631 411477.PARMER_01971 3.35e-125 357.0 2E727@1|root,331KU@2|Bacteria,4NVKM@976|Bacteroidetes,2FTWP@200643|Bacteroidia,230ZC@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02632 484018.BACPLE_01044 7.78e-40 134.0 COG1403@1|root,COG1403@2|Bacteria,4NT0M@976|Bacteroidetes 976|Bacteroidetes V HNH nucleases - - - - - - - - - - - - - PHJFGMMN_02633 411477.PARMER_01972 1.4e-263 721.0 COG3568@1|root,COG3568@2|Bacteria,4NGUV@976|Bacteroidetes,2FNIX@200643|Bacteroidia,22Y8N@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos PHJFGMMN_02634 411477.PARMER_01973 0.0 1232.0 COG1086@1|root,COG1086@2|Bacteria,4NERY@976|Bacteroidetes,2FMAA@200643|Bacteroidia,22WNH@171551|Porphyromonadaceae 976|Bacteroidetes GM Polysaccharide biosynthesis protein wbpM - - - - - - - - - - - CoA_binding_3,Polysacc_synt_2 PHJFGMMN_02635 411477.PARMER_01976 1.97e-223 615.0 COG1520@1|root,COG1520@2|Bacteria,4NX17@976|Bacteroidetes,2FQ59@200643|Bacteroidia 976|Bacteroidetes S COG NOG38781 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_02636 411477.PARMER_01977 5.94e-207 572.0 COG1830@1|root,COG1830@2|Bacteria,4P0GF@976|Bacteroidetes,2FP1C@200643|Bacteroidia 976|Bacteroidetes G DeoC/LacD family aldolase - - 2.3.1.245 ko:K08321 ko02024,map02024 - - - ko00000,ko00001,ko01000 - - - DeoC PHJFGMMN_02637 411477.PARMER_01978 3.14e-134 382.0 COG1461@1|root,COG1461@2|Bacteria,4P1FU@976|Bacteroidetes,2FPD2@200643|Bacteroidia 976|Bacteroidetes S DAK2 domain protein - - 2.7.1.121 ko:K05879 ko00561,ko01100,map00561,map01100 - R01012 RC00015,RC00017 ko00000,ko00001,ko01000 - - - Dak2 PHJFGMMN_02638 411477.PARMER_01979 5.53e-242 665.0 COG2376@1|root,COG2376@2|Bacteria,4NJC0@976|Bacteroidetes,2FPW4@200643|Bacteroidia 976|Bacteroidetes G Psort location Cytoplasmic, score 8.96 - - 2.7.1.121,2.7.1.28,2.7.1.29,4.6.1.15 ko:K00863,ko:K05878 ko00051,ko00561,ko00680,ko01100,ko01120,ko01200,ko04622,map00051,map00561,map00680,map01100,map01120,map01200,map04622 M00344 R01011,R01012,R01059 RC00002,RC00015,RC00017 ko00000,ko00001,ko00002,ko01000 - - - Dak1,Dak2 PHJFGMMN_02639 411477.PARMER_01980 2.76e-70 211.0 2DMM9@1|root,32SDB@2|Bacteria,4P3MJ@976|Bacteroidetes,2FSXN@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02640 411477.PARMER_01981 0.0 1597.0 COG0755@1|root,COG1333@1|root,COG0755@2|Bacteria,COG1333@2|Bacteria,4NDY1@976|Bacteroidetes,2FKZ1@200643|Bacteroidia,22W1T@171551|Porphyromonadaceae 976|Bacteroidetes O cytochrome c-type biogenesis protein CcsB ccmC - - - - - - - - - - - Cytochrom_C_asm,ResB PHJFGMMN_02641 411477.PARMER_01982 0.0 2719.0 COG1262@1|root,COG1262@2|Bacteria,4P1P1@976|Bacteroidetes,2G2Q7@200643|Bacteroidia 976|Bacteroidetes S NPCBM/NEW2 domain - - - - - - - - - - - - FGE-sulfatase,NPCBM PHJFGMMN_02642 411477.PARMER_01983 6.7e-164 460.0 COG3822@1|root,COG3822@2|Bacteria,4P1IF@976|Bacteroidetes,2FM0T@200643|Bacteroidia 976|Bacteroidetes S ABC-type sugar transport system, auxiliary component - - 5.3.1.15 ko:K09988 ko00040,map00040 - R01898 RC00516 ko00000,ko00001,ko01000 - - - - PHJFGMMN_02643 411477.PARMER_01984 4.58e-270 738.0 COG0251@1|root,COG0251@2|Bacteria,4NEVA@976|Bacteroidetes,2FN38@200643|Bacteroidia,22ZMQ@171551|Porphyromonadaceae 976|Bacteroidetes J endoribonuclease L-PSP - - - - - - - - - - - - - PHJFGMMN_02644 411477.PARMER_01985 0.0 1211.0 COG1858@1|root,COG3391@1|root,COG1858@2|Bacteria,COG3391@2|Bacteria,4NIPP@976|Bacteroidetes,2FNMB@200643|Bacteroidia 976|Bacteroidetes C cytochrome c peroxidase - - - - - - - - - - - - Big_5,CBM_3,Cytochrom_D1,PKD PHJFGMMN_02645 411477.PARMER_01986 3.05e-193 536.0 COG1414@1|root,COG1414@2|Bacteria,4NHTZ@976|Bacteroidetes,2FR53@200643|Bacteroidia,230HR@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix isocitrate lyase regulation - - - ko:K13641,ko:K19333 - - - - ko00000,ko03000 - - - HTH_IclR,IclR PHJFGMMN_02647 411477.PARMER_01989 1.06e-255 699.0 COG3507@1|root,COG3507@2|Bacteria,4NEIZ@976|Bacteroidetes,2G2NY@200643|Bacteroidia,22WFP@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 43 - - - - - - - - - - - - Glyco_hydro_43 PHJFGMMN_02648 411477.PARMER_01990 3.03e-298 813.0 COG1760@1|root,COG1760@2|Bacteria,4NENR@976|Bacteroidetes,2FMVE@200643|Bacteroidia,22W9U@171551|Porphyromonadaceae 976|Bacteroidetes E Serine dehydratase sdaA - 4.3.1.17 ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 - R00220,R00590 RC00331,RC02600 ko00000,ko00001,ko01000 - - - SDH_alpha,SDH_beta PHJFGMMN_02649 411477.PARMER_01991 1.83e-282 770.0 COG4299@1|root,COG4299@2|Bacteria,4NGKU@976|Bacteroidetes,2FNH7@200643|Bacteroidia,22WI6@171551|Porphyromonadaceae 976|Bacteroidetes S COGs COG4299 conserved - - - - - - - - - - - - DUF5009 PHJFGMMN_02650 411477.PARMER_01992 5.6e-274 748.0 COG4299@1|root,COG4299@2|Bacteria,4NGKU@976|Bacteroidetes,2FQUY@200643|Bacteroidia,22ZR3@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF5009) - - - - - - - - - - - - DUF5009 PHJFGMMN_02651 411477.PARMER_01993 3.19e-114 326.0 2DWZ4@1|root,342MK@2|Bacteria,4P4DY@976|Bacteroidetes,2FT7K@200643|Bacteroidia,230NB@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02652 411477.PARMER_01994 1.06e-163 457.0 COG2311@1|root,COG2311@2|Bacteria,4NG01@976|Bacteroidetes,2FSBE@200643|Bacteroidia,22XPP@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF418) - - - ko:K07148 - - - - ko00000 - - - DUF1624,DUF418 PHJFGMMN_02653 411477.PARMER_01996 2.46e-113 325.0 COG2311@1|root,COG2311@2|Bacteria,4NG01@976|Bacteroidetes 976|Bacteroidetes S membrane - - - ko:K07148 - - - - ko00000 - - - DUF1624,DUF418 PHJFGMMN_02654 411477.PARMER_01997 5.79e-120 343.0 COG1704@1|root,COG1704@2|Bacteria,4NMP9@976|Bacteroidetes,2FRGD@200643|Bacteroidia,22YA9@171551|Porphyromonadaceae 976|Bacteroidetes S LemA family lemA - - ko:K03744 - - - - ko00000 - - - LemA PHJFGMMN_02655 999419.HMPREF1077_03149 7.19e-198 552.0 COG0501@1|root,COG0501@2|Bacteria,4PIP6@976|Bacteroidetes,2FPH4@200643|Bacteroidia,22ZDM@171551|Porphyromonadaceae 976|Bacteroidetes O Peptidase family M48 htpX - - ko:K03799 - M00743 - - ko00000,ko00002,ko01000,ko01002 - - - Peptidase_M48 PHJFGMMN_02656 411477.PARMER_02000 5.13e-288 786.0 COG0006@1|root,COG0006@2|Bacteria,4NJI0@976|Bacteroidetes,2FMKH@200643|Bacteroidia,22WGZ@171551|Porphyromonadaceae 976|Bacteroidetes E peptidase M24 pepQ - 3.4.11.9,3.4.13.9 ko:K01262,ko:K01271 - - - - ko00000,ko01000,ko01002 - - - Creatinase_N,Peptidase_M24 PHJFGMMN_02657 411477.PARMER_02001 0.0 1139.0 COG1785@1|root,COG1785@2|Bacteria,4NG3D@976|Bacteroidetes,2FQUC@200643|Bacteroidia,22WG5@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the alkaline phosphatase family - - 3.1.3.1 ko:K01077 ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020 M00126 R02135,R04620 RC00017 ko00000,ko00001,ko00002,ko00537,ko01000,ko04147 - - - Alk_phosphatase PHJFGMMN_02658 411477.PARMER_02002 2.55e-252 694.0 COG0845@1|root,COG0845@2|Bacteria,4NEXN@976|Bacteroidetes,2FN62@200643|Bacteroidia,22WVC@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - Biotin_lipoyl_2,HlyD_D23 PHJFGMMN_02659 411477.PARMER_02004 0.0 2026.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FM3B@200643|Bacteroidia 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family bepE_1 - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran PHJFGMMN_02660 411477.PARMER_02005 6.82e-308 841.0 COG1538@1|root,COG1538@2|Bacteria,4NDZK@976|Bacteroidetes,2FND5@200643|Bacteroidia,22W3J@171551|Porphyromonadaceae 976|Bacteroidetes MU Efflux transporter, outer membrane factor oprM_1 - - - - - - - - - - - OEP PHJFGMMN_02661 411477.PARMER_02122 7.93e-219 603.0 COG0540@1|root,COG0540@2|Bacteria,4NFIU@976|Bacteroidetes,2FN60@200643|Bacteroidia,22W4C@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the ATCase OTCase family pyrB - 2.1.3.2 ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R01397 RC00064,RC02850 ko00000,ko00001,ko00002,ko01000 - - - OTCace,OTCace_N PHJFGMMN_02662 411477.PARMER_02123 5.07e-108 311.0 COG1781@1|root,COG1781@2|Bacteria,4NP1H@976|Bacteroidetes,2G380@200643|Bacteroidia,2320K@171551|Porphyromonadaceae 976|Bacteroidetes F Involved in allosteric regulation of aspartate carbamoyltransferase pyrI - - ko:K00610 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R01397 RC00064,RC02850 ko00000,ko00001,ko00002 - - - PyrI,PyrI_C PHJFGMMN_02663 411477.PARMER_02124 7.99e-142 399.0 COG1853@1|root,COG1853@2|Bacteria,4NF4H@976|Bacteroidetes,2FMUN@200643|Bacteroidia,22W3S@171551|Porphyromonadaceae 976|Bacteroidetes S flavin reductase - - - - - - - - - - - - Flavin_Reduct PHJFGMMN_02664 411477.PARMER_02125 8.06e-175 487.0 2AR7H@1|root,31GH7@2|Bacteria,4NQXT@976|Bacteroidetes,2FQE3@200643|Bacteroidia,22YUP@171551|Porphyromonadaceae 976|Bacteroidetes S Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl_2 PHJFGMMN_02665 411477.PARMER_02126 1.46e-81 241.0 arCOG09714@1|root,316P9@2|Bacteria,4NPX3@976|Bacteroidetes,2FSNU@200643|Bacteroidia,231QA@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG16854 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_02667 411477.PARMER_02127 1.34e-131 372.0 COG0655@1|root,COG0655@2|Bacteria,4NHHY@976|Bacteroidetes,2FQJ4@200643|Bacteroidia,22XTE@171551|Porphyromonadaceae 976|Bacteroidetes S NADPH-dependent FMN reductase ywqN - - - - - - - - - - - FMN_red PHJFGMMN_02669 457424.BFAG_04300 1.94e-33 117.0 COG2261@1|root,COG2261@2|Bacteria,4NUXX@976|Bacteroidetes,2FUM7@200643|Bacteroidia,4ARQR@815|Bacteroidaceae 976|Bacteroidetes S Transglycosylase associated protein - - - - - - - - - - - - Transgly_assoc PHJFGMMN_02670 411477.PARMER_02130 3.92e-135 382.0 COG1556@1|root,COG1556@2|Bacteria,4NQSF@976|Bacteroidetes,2FQAQ@200643|Bacteroidia,22XWN@171551|Porphyromonadaceae 976|Bacteroidetes S LUD domain lutC - - ko:K00782 - - - - ko00000 - - - LUD_dom PHJFGMMN_02671 411477.PARMER_02131 0.0 931.0 COG1139@1|root,COG1139@2|Bacteria,4NEBT@976|Bacteroidetes,2FP2X@200643|Bacteroidia,22W4D@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S ferredoxin - - - ko:K18929 - - - - ko00000 - - - DUF3390,Fer4_8,LUD_dom PHJFGMMN_02672 411477.PARMER_02132 4.01e-182 506.0 COG0247@1|root,COG0247@2|Bacteria,4NIMP@976|Bacteroidetes,2FN40@200643|Bacteroidia,22WPM@171551|Porphyromonadaceae 976|Bacteroidetes C Fe-S oxidoreductase - - - ko:K18928 - - - - ko00000 - - - CCG PHJFGMMN_02673 411477.PARMER_02133 0.0 2142.0 COG0458@1|root,COG0458@2|Bacteria,4NEQ0@976|Bacteroidetes,2FMKD@200643|Bacteroidia,22W4Y@171551|Porphyromonadaceae 976|Bacteroidetes EF Carbamoyl-phosphate synthase (glutamine-hydrolyzing) carB - 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - CPSase_L_D2,CPSase_L_D3,MGS PHJFGMMN_02674 411477.PARMER_02134 1.29e-286 781.0 COG0505@1|root,COG0505@2|Bacteria,4NEQI@976|Bacteroidetes,2FMSR@200643|Bacteroidia,22WBW@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the CarA family carA - 6.3.5.5 ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - CPSase_sm_chain,GATase PHJFGMMN_02675 411477.PARMER_02135 0.0 1279.0 COG0034@1|root,COG0034@2|Bacteria,4NFSM@976|Bacteroidetes,2FM3Y@200643|Bacteroidia,22W9N@171551|Porphyromonadaceae 976|Bacteroidetes F amidophosphoribosyltransferase purF - 2.4.2.14 ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048 R01072 RC00010,RC02724,RC02752 ko00000,ko00001,ko00002,ko01000,ko01002 - - - GATase_7 PHJFGMMN_02676 411477.PARMER_02137 1.44e-128 364.0 COG1670@1|root,COG1670@2|Bacteria,4NNXN@976|Bacteroidetes,2FRMM@200643|Bacteroidia,22YA6@171551|Porphyromonadaceae 976|Bacteroidetes J Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_3 PHJFGMMN_02677 411477.PARMER_02138 0.0 3200.0 COG0210@1|root,COG0514@1|root,COG0210@2|Bacteria,COG0514@2|Bacteria,4NIAS@976|Bacteroidetes,2FP12@200643|Bacteroidia,22W5W@171551|Porphyromonadaceae 976|Bacteroidetes L DNA helicase - - 3.6.4.12 ko:K03654 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03400 - - - AAA_19,DEAD,Helicase_C,UvrD-helicase,UvrD_C PHJFGMMN_02678 411477.PARMER_02140 0.0 974.0 COG4191@1|root,COG4191@2|Bacteria,4PMUW@976|Bacteroidetes,2G0H8@200643|Bacteroidia,230CI@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c PHJFGMMN_02679 411477.PARMER_02141 0.0 2936.0 COG0067@1|root,COG0069@1|root,COG0070@1|root,COG0067@2|Bacteria,COG0069@2|Bacteria,COG0070@2|Bacteria,4NFKH@976|Bacteroidetes,2FNH9@200643|Bacteroidia,22W08@171551|Porphyromonadaceae 976|Bacteroidetes E GXGXG motif gltB - 1.4.1.13,1.4.1.14,1.4.7.1 ko:K00265,ko:K00284 ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230 - R00021,R00093,R00114,R00248,R10086 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 - - - GATase_2,GXGXG,Glu_syn_central,Glu_synthase PHJFGMMN_02680 411477.PARMER_02142 0.0 971.0 COG0493@1|root,COG0493@2|Bacteria,4NG9R@976|Bacteroidetes,2FN6R@200643|Bacteroidia,22W9Q@171551|Porphyromonadaceae 976|Bacteroidetes C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster gltD - 1.4.1.13,1.4.1.14 ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 - R00093,R00114,R00248 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 - - - Fer4_20,Pyr_redox_2 PHJFGMMN_02681 999419.HMPREF1077_02548 0.0 1103.0 COG0367@1|root,COG0367@2|Bacteria,4NFQ3@976|Bacteroidetes,2FNDJ@200643|Bacteroidia,22WTD@171551|Porphyromonadaceae 976|Bacteroidetes E Glutamine amidotransferase domain asnB - 6.3.5.4 ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 - R00578 RC00010 ko00000,ko00001,ko01000,ko01002 - - - Asn_synthase,GATase_7 PHJFGMMN_02682 411477.PARMER_02146 0.0 1292.0 COG4886@1|root,COG4886@2|Bacteria,4P4WY@976|Bacteroidetes,2FU2X@200643|Bacteroidia 976|Bacteroidetes S COG NOG38840 non supervised orthologous group - - - - - - - - - - - - DUF4988,LRR_5 PHJFGMMN_02683 411477.PARMER_02147 9.78e-185 513.0 2CC7R@1|root,334IS@2|Bacteria,4NX6W@976|Bacteroidetes,2FVDG@200643|Bacteroidia,231B8@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4469) with IG-like fold - - - - - - - - - - - - DUF4469,HU-DNA_bdg PHJFGMMN_02684 411477.PARMER_02148 6.01e-80 236.0 COG1917@1|root,COG1917@2|Bacteria,4NSEB@976|Bacteroidetes,2FSS8@200643|Bacteroidia,22YCB@171551|Porphyromonadaceae 976|Bacteroidetes S Cupin domain - - - - - - - - - - - - Cupin_2 PHJFGMMN_02685 411477.PARMER_02149 0.0 2402.0 COG3250@1|root,COG3250@2|Bacteria,4NF3W@976|Bacteroidetes,2FM0P@200643|Bacteroidia,22WQH@171551|Porphyromonadaceae 976|Bacteroidetes G Beta galactosidase small chain - - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - Bgal_small_N,DUF4981,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N,RicinB_lectin_2 PHJFGMMN_02686 411477.PARMER_02151 0.0 1134.0 COG3408@1|root,COG3408@2|Bacteria,4NHCI@976|Bacteroidetes,2FWPV@200643|Bacteroidia 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - - - - - - - - - - Bac_rhamnosid6H PHJFGMMN_02687 411477.PARMER_02152 7.22e-199 550.0 COG0253@1|root,COG0253@2|Bacteria,4NF26@976|Bacteroidetes,2FNI4@200643|Bacteroidia,22WSU@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan dapF - 5.1.1.7 ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00527 R02735 RC00302 ko00000,ko00001,ko00002,ko01000 - - - DAP_epimerase PHJFGMMN_02688 411477.PARMER_02153 5.56e-312 848.0 COG0436@1|root,COG0436@2|Bacteria,4NFWS@976|Bacteroidetes,2FMMU@200643|Bacteroidia,22WC2@171551|Porphyromonadaceae 976|Bacteroidetes E Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate dapL - 2.6.1.83 ko:K10206 ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230 M00527 R07613 RC00006,RC01847 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2 PHJFGMMN_02689 411477.PARMER_02154 0.0 1448.0 COG3968@1|root,COG3968@2|Bacteria,4NG2B@976|Bacteroidetes,2FMC9@200643|Bacteroidia,22WEW@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the glutamine synthetase family glnA - 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 - R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 - - - GSIII_N,Gln-synt_C PHJFGMMN_02691 411477.PARMER_02157 0.0 1278.0 COG0171@1|root,COG0388@1|root,COG0171@2|Bacteria,COG0388@2|Bacteria,4NHXQ@976|Bacteroidetes,2FNAT@200643|Bacteroidia,22VUJ@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source nadE - 6.3.5.1 ko:K01950 ko00760,ko01100,map00760,map01100 M00115 R00257 RC00010,RC00100 ko00000,ko00001,ko00002,ko01000 - - - CN_hydrolase,NAD_synthase PHJFGMMN_02692 411477.PARMER_02160 0.0 967.0 COG0673@1|root,COG0673@2|Bacteria,4NF3G@976|Bacteroidetes,2FN3V@200643|Bacteroidia,22VW2@171551|Porphyromonadaceae 976|Bacteroidetes S hydrolase activity, acting on glycosyl bonds nagA - - - - - - - - - - - GFO_IDH_MocA PHJFGMMN_02693 411477.PARMER_02161 3.16e-293 801.0 COG0513@1|root,COG0513@2|Bacteria,4NEVI@976|Bacteroidetes,2FM7Y@200643|Bacteroidia,22W9M@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the DEAD box helicase family rhlE - 3.6.4.13 ko:K11927 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - DEAD,Helicase_C PHJFGMMN_02694 742817.HMPREF9449_00532 4.95e-257 709.0 COG0582@1|root,COG0582@2|Bacteria,4P1H5@976|Bacteroidetes,2G0K2@200643|Bacteroidia,2324Q@171551|Porphyromonadaceae 976|Bacteroidetes L Phage integrase SAM-like domain - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_02695 742817.HMPREF9449_00533 2.43e-284 780.0 COG0582@1|root,COG0582@2|Bacteria,4NDZJ@976|Bacteroidetes,2FM4Q@200643|Bacteroidia,22WPV@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_02696 357276.EL88_13370 8.97e-62 190.0 2CD08@1|root,33WZT@2|Bacteria,4P3PU@976|Bacteroidetes,2FSPN@200643|Bacteroidia,4AQXF@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - HTH_17 PHJFGMMN_02697 742817.HMPREF9449_00535 4.39e-62 190.0 COG0789@1|root,COG0789@2|Bacteria,4NPZ2@976|Bacteroidetes,2FS3U@200643|Bacteroidia,230IX@171551|Porphyromonadaceae 976|Bacteroidetes K MerR HTH family regulatory protein - - - - - - - - - - - - HTH_17 PHJFGMMN_02698 880074.BARVI_10675 3.89e-48 155.0 2D42G@1|root,33VZP@2|Bacteria,4P3Q4@976|Bacteroidetes,2FT43@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - HTH_17 PHJFGMMN_02699 1122971.BAME01000070_gene4965 7.56e-44 148.0 2E2HN@1|root,32XMI@2|Bacteria,4NTH0@976|Bacteroidetes,2G0RD@200643|Bacteroidia,230I5@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - RibD_C PHJFGMMN_02700 1501391.LG35_09860 2.35e-249 687.0 COG4974@1|root,COG4974@2|Bacteria,4NFDF@976|Bacteroidetes,2FQ0U@200643|Bacteroidia,22VGV@171550|Rikenellaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_02701 709991.Odosp_1003 9.68e-291 795.0 COG1373@1|root,COG1373@2|Bacteria,4NGHI@976|Bacteroidetes,2FQKN@200643|Bacteroidia,22VXV@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4143) - - - ko:K07133 - - - - ko00000 - - - AAA_14,DUF4143 PHJFGMMN_02702 1236508.BAKF01000013_gene1297 2.12e-178 502.0 28JBZ@1|root,2Z96M@2|Bacteria,4NK4A@976|Bacteroidetes,2FV98@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF1837) - - - - - - - - - - - - DUF1837 PHJFGMMN_02703 445970.ALIPUT_02064 0.0 1361.0 COG1204@1|root,COG1204@2|Bacteria,4NKRN@976|Bacteroidetes,2FPWX@200643|Bacteroidia 976|Bacteroidetes L DEAD/DEAH box helicase - - - - - - - - - - - - DEAD,Helicase_C PHJFGMMN_02704 762984.HMPREF9445_00596 1.36e-102 298.0 29YQ5@1|root,30KJS@2|Bacteria,4NPZ1@976|Bacteroidetes,2FRT4@200643|Bacteroidia,4AQG1@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02705 742727.HMPREF9447_01091 8.39e-128 365.0 2C39N@1|root,3363G@2|Bacteria,4NW1A@976|Bacteroidetes,2FPIC@200643|Bacteroidia,4AW0V@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02706 1121899.Q764_14095 1.52e-46 153.0 2F99S@1|root,341KW@2|Bacteria,4P4TW@976|Bacteroidetes 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02707 762984.HMPREF9445_00597 5.2e-228 629.0 28KHY@1|root,2ZA3C@2|Bacteria,4PIVN@976|Bacteroidetes,2FQ1F@200643|Bacteroidia,4ANJA@815|Bacteroidaceae 976|Bacteroidetes L HNH endonuclease - - - - - - - - - - - - HNH_3 PHJFGMMN_02708 1121100.JCM6294_1927 1.33e-147 434.0 COG3547@1|root,COG3547@2|Bacteria,4NJ8G@976|Bacteroidetes,2FRWC@200643|Bacteroidia,4ASIF@815|Bacteroidaceae 976|Bacteroidetes L COG COG3547 Transposase and inactivated derivatives - - - - - - - - - - - - DEDD_Tnp_IS110,Transposase_20 PHJFGMMN_02709 357276.EL88_18375 5.79e-232 648.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMCJ@200643|Bacteroidia,4AM40@815|Bacteroidaceae 976|Bacteroidetes T Psort location Cytoplasmic, score - - - ko:K07713 ko02020,map02020 M00499 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat PHJFGMMN_02710 1122931.AUAE01000026_gene2574 1.45e-275 785.0 COG0642@1|root,COG0745@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,4NFEF@976|Bacteroidetes,2FNF0@200643|Bacteroidia,22WEZ@171551|Porphyromonadaceae 976|Bacteroidetes T ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - - - - - - - - - - HATPase_c,HisKA,Response_reg PHJFGMMN_02712 411479.BACUNI_00629 1.46e-195 556.0 COG3344@1|root,COG3344@2|Bacteria,4NJ82@976|Bacteroidetes,2G32H@200643|Bacteroidia,4AM7K@815|Bacteroidaceae 976|Bacteroidetes L COG COG3344 Retron-type reverse transcriptase - - - - - - - - - - - - RVT_1 PHJFGMMN_02713 709991.Odosp_3574 2.53e-80 238.0 2C2BQ@1|root,32VU6@2|Bacteria,4NR2X@976|Bacteroidetes,2FSTG@200643|Bacteroidia,22YZT@171551|Porphyromonadaceae 976|Bacteroidetes S 23S rRNA-intervening sequence protein - - - - - - - - - - - - 23S_rRNA_IVP PHJFGMMN_02714 709991.Odosp_0526 8.27e-222 630.0 2EH66@1|root,33AY2@2|Bacteria,4NXKY@976|Bacteroidetes,2FM7D@200643|Bacteroidia,22YZ6@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - Mfa_like_1 PHJFGMMN_02715 1203611.KB894558_gene1156 1.53e-289 803.0 2DVKB@1|root,33W8U@2|Bacteria,4P1YN@976|Bacteroidetes,2FTMG@200643|Bacteroidia 976|Bacteroidetes S Fimbrillin-like - - - - - - - - - - - - - PHJFGMMN_02716 709991.Odosp_3577 1.92e-240 661.0 2DVB3@1|root,33V3E@2|Bacteria,4P2YG@976|Bacteroidetes,2G2RG@200643|Bacteroidia 976|Bacteroidetes S Fimbrillin-like - - - - - - - - - - - - Mfa_like_1 PHJFGMMN_02717 709991.Odosp_0523 8.77e-194 539.0 2B8D4@1|root,321N1@2|Bacteria,4NRJT@976|Bacteroidetes,2FQ9N@200643|Bacteroidia,22YAC@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - Mfa2 PHJFGMMN_02718 742817.HMPREF9449_01655 9.32e-187 530.0 COG2885@1|root,COG2885@2|Bacteria,4NZVR@976|Bacteroidetes,2FQBU@200643|Bacteroidia 976|Bacteroidetes M Protein of unknown function (DUF3575) - - - - - - - - - - - - DUF3575,OmpA PHJFGMMN_02721 1122931.AUAE01000026_gene2583 1.74e-159 450.0 COG0476@1|root,COG0476@2|Bacteria,4NHIM@976|Bacteroidetes,2FNSP@200643|Bacteroidia,22ZJ6@171551|Porphyromonadaceae 976|Bacteroidetes H ThiF family - - - - - - - - - - - - ThiF PHJFGMMN_02722 1268240.ATFI01000003_gene5221 2.16e-137 392.0 28M9D@1|root,2ZANB@2|Bacteria,4NIRS@976|Bacteroidetes,2FQ6N@200643|Bacteroidia,4ANTB@815|Bacteroidaceae 976|Bacteroidetes S PRTRC system protein B - - - - - - - - - - - - Prok-E2_D PHJFGMMN_02723 1268240.ATFI01000003_gene5220 2.17e-172 491.0 2EXAN@1|root,33QMB@2|Bacteria,4P19W@976|Bacteroidetes,2FQQ3@200643|Bacteroidia,4ANC1@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_02724 1268240.ATFI01000003_gene5219 4.3e-44 143.0 2EHB8@1|root,33B33@2|Bacteria,4NX7T@976|Bacteroidetes,2FUTY@200643|Bacteroidia,4ASEU@815|Bacteroidaceae 976|Bacteroidetes S Prokaryotic Ubiquitin - - - - - - - - - - - - Prok_Ub PHJFGMMN_02725 1268240.ATFI01000003_gene5218 4.95e-103 311.0 28I8H@1|root,2Z8BB@2|Bacteria,4NGRI@976|Bacteroidetes,2FQ9V@200643|Bacteroidia,4AKXM@815|Bacteroidaceae 976|Bacteroidetes S PRTRC system protein E - - - - - - - - - - - - - PHJFGMMN_02726 357276.EL88_13575 2.35e-27 100.0 2EPQF@1|root,31MWR@2|Bacteria,4PJ2F@976|Bacteroidetes,2G1T5@200643|Bacteroidia,4AUZ8@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02728 742817.HMPREF9449_00579 1.02e-33 117.0 2EJ39@1|root,33CUG@2|Bacteria,4NY5B@976|Bacteroidetes,2FVQ4@200643|Bacteroidia,23136@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02729 357276.EL88_13590 0.0 1191.0 COG0550@1|root,COG0550@2|Bacteria,4NE6R@976|Bacteroidetes,2FMKQ@200643|Bacteroidia,4AKJT@815|Bacteroidaceae 976|Bacteroidetes L COG0550 Topoisomerase IA - - 5.99.1.2 ko:K03169 - - - - ko00000,ko01000,ko03032 - - - Topoisom_bac,Toprim,Toprim_Crpt PHJFGMMN_02730 357276.EL88_13595 8.73e-46 148.0 2E1ZS@1|root,32X85@2|Bacteria,4NU3Z@976|Bacteroidetes,2FTSN@200643|Bacteroidia,4ASHI@815|Bacteroidaceae 976|Bacteroidetes S Protein of unknown function (DUF4099) - - - - - - - - - - - - DUF4099 PHJFGMMN_02731 742817.HMPREF9449_00582 0.0 970.0 2CI0Q@1|root,2Z86V@2|Bacteria,4NEAY@976|Bacteroidetes,2FN31@200643|Bacteroidia,22XID@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF4099) - - - - - - - - - - - - DUF3945,DUF4099 PHJFGMMN_02733 357276.EL88_13615 1.15e-279 767.0 COG1373@1|root,COG1373@2|Bacteria,4NJDI@976|Bacteroidetes,2FN02@200643|Bacteroidia,4AW87@815|Bacteroidaceae 976|Bacteroidetes S ATPase (AAA superfamily) - - - ko:K07133 - - - - ko00000 - - - AAA_14,DUF4143 PHJFGMMN_02734 357276.EL88_13620 3.38e-56 175.0 2E17T@1|root,32WNF@2|Bacteria,4NTR4@976|Bacteroidetes,2FUGS@200643|Bacteroidia,4AU3R@815|Bacteroidaceae 976|Bacteroidetes S Domain of unknown function (DUF4120) - - - - - - - - - - - - DUF4120 PHJFGMMN_02735 357276.EL88_13625 2.3e-95 280.0 2CXPZ@1|root,32T2B@2|Bacteria,4NUBW@976|Bacteroidetes,2FSUP@200643|Bacteroidia,4AR40@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_02736 742817.HMPREF9449_00585 4.78e-44 144.0 2DNJX@1|root,32XVV@2|Bacteria,4NSD8@976|Bacteroidetes,2FUHC@200643|Bacteroidia,230U4@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02737 357276.EL88_13635 6.38e-48 154.0 2EEZU@1|root,338SX@2|Bacteria,4NWSX@976|Bacteroidetes,2FU2D@200643|Bacteroidia,4AU6F@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02738 1268240.ATFI01000003_gene5197 0.0 1269.0 COG3505@1|root,COG3505@2|Bacteria,4NFHI@976|Bacteroidetes,2FMIB@200643|Bacteroidia,4AKFZ@815|Bacteroidaceae 976|Bacteroidetes U COG COG3505 Type IV secretory pathway, VirD4 components - - - - - - - - - - - - T4SS-DNA_transf,TraG-D_C,TrwB_AAD_bind,YWFCY PHJFGMMN_02739 1268240.ATFI01000003_gene5196 3.24e-274 753.0 COG3843@1|root,COG3843@2|Bacteria,4NG66@976|Bacteroidetes,2FMZN@200643|Bacteroidia,4AMDR@815|Bacteroidaceae 976|Bacteroidetes U Relaxase mobilization nuclease domain protein - - - - - - - - - - - - Relaxase PHJFGMMN_02740 357276.EL88_13670 1.33e-83 249.0 2BXUM@1|root,32WQK@2|Bacteria,4NUD3@976|Bacteroidetes,2FT0D@200643|Bacteroidia,4AR41@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02741 880074.BARVI_10465 1.36e-150 427.0 COG1192@1|root,COG1192@2|Bacteria,4NF6M@976|Bacteroidetes,2FQAU@200643|Bacteroidia,23211@171551|Porphyromonadaceae 976|Bacteroidetes D ATPase MipZ - - - - - - - - - - - - AAA_31,MipZ PHJFGMMN_02742 880074.BARVI_10460 4.47e-63 196.0 2DR7C@1|root,33AIR@2|Bacteria,4NZKV@976|Bacteroidetes,2FUVS@200643|Bacteroidia,22Z26@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3408) - - - - - - - - - - - - DUF3408 PHJFGMMN_02744 880074.BARVI_10455 2.85e-72 228.0 2EYT7@1|root,33S0D@2|Bacteria,4P1KZ@976|Bacteroidetes,2FS4J@200643|Bacteroidia,230RG@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4122) - - - - - - - - - - - - DUF4122 PHJFGMMN_02745 357276.EL88_13695 7.96e-52 165.0 2DPHZ@1|root,3325A@2|Bacteria,4P47G@976|Bacteroidetes,2FS2X@200643|Bacteroidia,4AQJ0@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02746 1121094.KB894644_gene2064 3.36e-43 148.0 COG4474@1|root,COG4474@2|Bacteria,4NHUX@976|Bacteroidetes,2FTV6@200643|Bacteroidia,4APP8@815|Bacteroidaceae 976|Bacteroidetes S Protein of unknown function (DUF1273) - - - - - - - - - - - - DUF1273 PHJFGMMN_02747 357276.EL88_13710 1.21e-59 184.0 2AV4I@1|root,31KUP@2|Bacteria,4NQM2@976|Bacteroidetes,2FT2M@200643|Bacteroidia,4AR9Q@815|Bacteroidaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - DUF4134 PHJFGMMN_02748 880074.BARVI_10440 1.82e-62 192.0 293NS@1|root,32VJH@2|Bacteria,4NU0K@976|Bacteroidetes,2FTK2@200643|Bacteroidia,230K2@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4133) - - - - - - - - - - - - DUF4133 PHJFGMMN_02749 742817.HMPREF9449_00604 0.0 1570.0 COG3451@1|root,COG3451@2|Bacteria,4NER7@976|Bacteroidetes,2FM54@200643|Bacteroidia,22VZ4@171551|Porphyromonadaceae 976|Bacteroidetes U conjugation system ATPase - - - - - - - - - - - - DUF3875,DUF87 PHJFGMMN_02750 742817.HMPREF9449_00605 4.17e-91 272.0 2BD9C@1|root,326XQ@2|Bacteria,4NR7V@976|Bacteroidetes,2FQ3C@200643|Bacteroidia,2311Z@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_02751 357276.EL88_13730 5.84e-134 381.0 COG5314@1|root,COG5314@2|Bacteria,4NF40@976|Bacteroidetes,2FNDM@200643|Bacteroidia,4AM3D@815|Bacteroidaceae 976|Bacteroidetes U COG NOG09946 non supervised orthologous group - - - - - - - - - - - - DUF4141 PHJFGMMN_02752 742817.HMPREF9449_00607 4.89e-219 607.0 28IE2@1|root,2Z8G6@2|Bacteria,4NFI5@976|Bacteroidetes,2FMZM@200643|Bacteroidia,22WJV@171551|Porphyromonadaceae 976|Bacteroidetes S Conjugative transposon TraJ protein - - - - - - - - - - - - CtnDOT_TraJ PHJFGMMN_02753 357276.EL88_13740 1.56e-137 390.0 COG3701@1|root,COG3701@2|Bacteria,4NFVT@976|Bacteroidetes,2FMF8@200643|Bacteroidia,4APXI@815|Bacteroidaceae 976|Bacteroidetes U Conjugative transposon TraK protein - - - - - - - - - - - - VirB8 PHJFGMMN_02754 880074.BARVI_10415 2.08e-38 130.0 2F2PN@1|root,33WUB@2|Bacteria,4P3UQ@976|Bacteroidetes,2FU6H@200643|Bacteroidia,230V4@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3989) - - - - - - - - - - - - DUF3989 PHJFGMMN_02755 742817.HMPREF9449_00610 5.31e-201 568.0 28HNW@1|root,2Z7X2@2|Bacteria,4NG2R@976|Bacteroidetes,2FMTP@200643|Bacteroidia,22VUZ@171551|Porphyromonadaceae 976|Bacteroidetes S Conjugative transposon TraM protein traM - - - - - - - - - - - Transposon_TraM PHJFGMMN_02756 471870.BACINT_03303 2.7e-200 558.0 COG3504@1|root,COG3504@2|Bacteria,4NH1R@976|Bacteroidetes,2FMQ5@200643|Bacteroidia,4AM07@815|Bacteroidaceae 976|Bacteroidetes U Conjugative transposon TraN protein - - - - - - - - - - - - DUF4138 PHJFGMMN_02757 1122971.BAME01000087_gene5518 2.78e-109 317.0 28JHB@1|root,2Z9AW@2|Bacteria,4NFVA@976|Bacteroidetes,2FPHI@200643|Bacteroidia,22XY6@171551|Porphyromonadaceae 976|Bacteroidetes S Conjugative transposon protein TraO - - - - - - - - - - - - TraO PHJFGMMN_02758 357276.EL88_13765 6.95e-159 451.0 COG0358@1|root,COG0358@2|Bacteria,4NH5X@976|Bacteroidetes,2FMS3@200643|Bacteroidia,4AMNB@815|Bacteroidaceae 976|Bacteroidetes L CHC2 zinc finger domain protein - - - - - - - - - - - - Toprim_2,zf-CHC2 PHJFGMMN_02759 357276.EL88_13770 3.19e-77 235.0 28M8P@1|root,2ZAMS@2|Bacteria,4NKY2@976|Bacteroidetes,2FP2C@200643|Bacteroidia,4AR5G@815|Bacteroidaceae 976|Bacteroidetes S Domain of unknown function, B. Theta Gene description (DUF3872) - - - - - - - - - - - - DUF3872 PHJFGMMN_02760 1122931.AUAE01000005_gene3585 3.52e-79 239.0 COG3772@1|root,COG3772@2|Bacteria,4NHIE@976|Bacteroidetes,2FQ7P@200643|Bacteroidia,230AC@171551|Porphyromonadaceae 976|Bacteroidetes S lysozyme - - 3.2.1.17 ko:K01185 - - - - ko00000,ko01000 - - - - PHJFGMMN_02761 742817.HMPREF9449_00616 2.04e-67 212.0 2EWFC@1|root,33PTT@2|Bacteria,4P189@976|Bacteroidetes,2FMJP@200643|Bacteroidia,22Z7S@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - DUF932 PHJFGMMN_02762 411477.PARMER_02281 5.03e-76 227.0 2DVCI@1|root,33VA3@2|Bacteria,4P2EU@976|Bacteroidetes,2FVW9@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02763 411477.PARMER_02280 1.37e-72 218.0 COG3436@1|root,COG3436@2|Bacteria,4P3C3@976|Bacteroidetes,2G2D6@200643|Bacteroidia 976|Bacteroidetes L IS66 Orf2 like protein - - - - - - - - - - - - TnpB_IS66 PHJFGMMN_02764 411477.PARMER_02279 0.0 1088.0 COG4974@1|root,COG4974@2|Bacteria,4NEK2@976|Bacteroidetes,2FMJC@200643|Bacteroidia 976|Bacteroidetes L IS66 family element, transposase - - - - - - - - - - - - DDE_Tnp_IS66,DDE_Tnp_IS66_C,LZ_Tnp_IS66 PHJFGMMN_02765 742817.HMPREF9449_00616 3.62e-125 362.0 2EWFC@1|root,33PTT@2|Bacteria,4P189@976|Bacteroidetes,2FMJP@200643|Bacteroidia,22Z7S@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - DUF932 PHJFGMMN_02766 357276.EL88_13785 1.6e-63 194.0 2E17T@1|root,32WNF@2|Bacteria,4NTR4@976|Bacteroidetes,2FUGS@200643|Bacteroidia,4AQFW@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - DUF4120 PHJFGMMN_02767 1122971.BAME01000067_gene4856 1.61e-39 138.0 2DUQY@1|root,33RTR@2|Bacteria,4P1JQ@976|Bacteroidetes,2FMQ1@200643|Bacteroidia,22ZVU@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02768 1235788.C802_00312 5.64e-59 188.0 2DZJX@1|root,32VCP@2|Bacteria,4NUJK@976|Bacteroidetes,2FU7K@200643|Bacteroidia,4ARZ3@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02769 411477.PARMER_01078 4.47e-115 336.0 2CEQ9@1|root,33RCB@2|Bacteria,4P24A@976|Bacteroidetes,2FPMB@200643|Bacteroidia,22Z3U@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02770 1392486.JIAF01000001_gene325 1.41e-08 56.6 2DUQY@1|root,33RTR@2|Bacteria,4P1JQ@976|Bacteroidetes,2FMQ1@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02771 357276.EL88_13805 1.79e-223 618.0 COG2214@1|root,COG2214@2|Bacteria,4NZST@976|Bacteroidetes,2FQX2@200643|Bacteroidia,4AKPC@815|Bacteroidaceae 976|Bacteroidetes O DnaJ molecular chaperone homology domain - - - - - - - - - - - - - PHJFGMMN_02772 471870.BACINT_03285 3.58e-77 239.0 2BX68@1|root,33U1F@2|Bacteria,4P2HN@976|Bacteroidetes,2FSUH@200643|Bacteroidia,4AQWY@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02773 880074.BARVI_12100 3.02e-101 297.0 2CXPZ@1|root,33HEF@2|Bacteria,4NZGZ@976|Bacteroidetes,2FRJB@200643|Bacteroidia,22YYM@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02774 1122971.BAME01000067_gene4851 1.04e-86 258.0 2C2RP@1|root,33PBC@2|Bacteria,4P0NX@976|Bacteroidetes,2FQ0X@200643|Bacteroidia,22ZVV@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4313) - - - - - - - - - - - - DUF4313 PHJFGMMN_02775 357276.EL88_13825 7.75e-191 533.0 2EYDM@1|root,33RMU@2|Bacteria,4P0A9@976|Bacteroidetes,2FPD5@200643|Bacteroidia,4AVMB@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02776 357276.EL88_13830 1.96e-41 138.0 2FE5U@1|root,3465P@2|Bacteria,4P55Q@976|Bacteroidetes,2FUK5@200643|Bacteroidia,4ASAG@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02777 357276.EL88_13840 4.96e-55 173.0 2F6JT@1|root,33Z2Q@2|Bacteria,4P4G2@976|Bacteroidetes,2FTA1@200643|Bacteroidia,4ARVW@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02778 357276.EL88_13845 4.01e-99 289.0 COG4734@1|root,COG4734@2|Bacteria,4NMZR@976|Bacteroidetes,2FS68@200643|Bacteroidia,4ARE8@815|Bacteroidaceae 976|Bacteroidetes S anti-restriction protein ard - - - - - - - - - - - ArdA PHJFGMMN_02780 357276.EL88_13855 0.0 1763.0 COG0553@1|root,COG0827@1|root,COG0553@2|Bacteria,COG0827@2|Bacteria,4NKYW@976|Bacteroidetes,2FQFS@200643|Bacteroidia,4AKRB@815|Bacteroidaceae 976|Bacteroidetes L N-6 DNA Methylase - - - - - - - - - - - - Helicase_C,MTS,N6_Mtase,ResIII PHJFGMMN_02781 357276.EL88_13860 2.12e-190 532.0 2EWKR@1|root,33PYS@2|Bacteria,4NZZC@976|Bacteroidetes,2FQ5T@200643|Bacteroidia,4APN6@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02782 357276.EL88_13865 3.69e-160 452.0 2C06Q@1|root,32R6D@2|Bacteria,4NRQN@976|Bacteroidetes,2FN4Q@200643|Bacteroidia,4APP0@815|Bacteroidaceae 976|Bacteroidetes S Domain of unknown function (DUF4121) - - - - - - - - - - - - DUF4121 PHJFGMMN_02784 457424.BFAG_00459 9.75e-296 806.0 COG0582@1|root,COG0582@2|Bacteria,4NVIT@976|Bacteroidetes,2G080@200643|Bacteroidia,4AV97@815|Bacteroidaceae 976|Bacteroidetes L COG4974 Site-specific recombinase XerD - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_02785 445970.ALIPUT_02067 7.13e-87 255.0 COG3943@1|root,COG3943@2|Bacteria,4NQ20@976|Bacteroidetes,2FS6A@200643|Bacteroidia 976|Bacteroidetes S COG3943, virulence protein - - - - - - - - - - - - - PHJFGMMN_02786 445970.ALIPUT_02069 5.44e-299 814.0 COG3378@1|root,COG3378@2|Bacteria,4NE1A@976|Bacteroidetes,2FPTD@200643|Bacteroidia,22V3C@171550|Rikenellaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_02787 457424.BFAG_00463 1.19e-232 639.0 COG0358@1|root,COG0358@2|Bacteria,4NH5X@976|Bacteroidetes,2FPHT@200643|Bacteroidia,4AKC7@815|Bacteroidaceae 976|Bacteroidetes L Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - Toprim_2,zf-CHC2 PHJFGMMN_02788 445970.ALIPUT_00470 2.56e-83 246.0 2E51N@1|root,32ZV1@2|Bacteria,4NW1B@976|Bacteroidetes,2FTRR@200643|Bacteroidia,22VJD@171550|Rikenellaceae 976|Bacteroidetes S Bacterial mobilisation protein (MobC) - - - - - - - - - - - - MobC PHJFGMMN_02789 445970.ALIPUT_00469 3.97e-228 628.0 COG3843@1|root,COG3843@2|Bacteria,4NH77@976|Bacteroidetes,2FM27@200643|Bacteroidia,22V9E@171550|Rikenellaceae 976|Bacteroidetes U Relaxase mobilization nuclease domain protein - - - - - - - - - - - - Relaxase PHJFGMMN_02790 445970.ALIPUT_00468 5.5e-162 452.0 COG2207@1|root,COG2207@2|Bacteria,4P0B0@976|Bacteroidetes,2FQHM@200643|Bacteroidia 976|Bacteroidetes K methylphosphotriester-DNA alkyltransferase (AraC XylS family) K00567 - - - - - - - - - - - - HTH_18 PHJFGMMN_02791 445970.ALIPUT_00466 8.91e-217 598.0 COG2207@1|root,COG2207@2|Bacteria,4NJYE@976|Bacteroidetes,2FQ6S@200643|Bacteroidia 976|Bacteroidetes K transcriptional regulator (AraC family) - - - ko:K18954 - - - - ko00000,ko03000 - - - AraC_binding,HTH_18 PHJFGMMN_02792 445970.ALIPUT_00465 2.41e-189 525.0 COG2220@1|root,COG2220@2|Bacteria,4NR14@976|Bacteroidetes,2FNB9@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 yddR - - - - - - - - - - - Lactamase_B_2,Lactamase_B_3 PHJFGMMN_02793 445970.ALIPUT_00463 4.96e-159 445.0 COG4422@1|root,COG4422@2|Bacteria,4P2ZI@976|Bacteroidetes,2FRRH@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - DUF5131 PHJFGMMN_02794 445970.ALIPUT_00462 1.27e-221 609.0 COG1533@1|root,COG1533@2|Bacteria,4NE62@976|Bacteroidetes,2FP03@200643|Bacteroidia 976|Bacteroidetes L radical SAM domain protein - - - - - - - - - - - - Radical_SAM PHJFGMMN_02795 445970.ALIPUT_00461 3e-296 809.0 COG0642@1|root,COG0745@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,4P0GH@976|Bacteroidetes,2FR0Z@200643|Bacteroidia 976|Bacteroidetes T ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - - - - - - - - - - HATPase_c,Response_reg PHJFGMMN_02796 457424.BFAG_00473 0.0 870.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMCJ@200643|Bacteroidia,4AMTX@815|Bacteroidaceae 976|Bacteroidetes T acetoacetate metabolism regulatory protein AtoC K07714 zraR - - ko:K07713 ko02020,map02020 M00499 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat PHJFGMMN_02797 411477.PARMER_02162 0.0 1229.0 COG0514@1|root,COG0514@2|Bacteria,4NG10@976|Bacteroidetes,2FPSQ@200643|Bacteroidia,22XF8@171551|Porphyromonadaceae 976|Bacteroidetes L RQC recQ3 - 3.6.4.12 ko:K03654 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,HRDC,HTH_40,Helicase_C,RQC,RecQ_Zn_bind PHJFGMMN_02798 411477.PARMER_02163 6.27e-251 687.0 COG1376@1|root,COG1376@2|Bacteria,4NHZG@976|Bacteroidetes,2FN2P@200643|Bacteroidia,22X9Y@171551|Porphyromonadaceae 976|Bacteroidetes S L,D-transpeptidase catalytic domain - - - - - - - - - - - - YkuD PHJFGMMN_02799 999419.HMPREF1077_02533 8.84e-162 454.0 COG1376@1|root,COG1376@2|Bacteria,4NNX7@976|Bacteroidetes,2FM99@200643|Bacteroidia,22XQ2@171551|Porphyromonadaceae 976|Bacteroidetes S L,D-transpeptidase catalytic domain - - - - - - - - - - - - YkuD_2 PHJFGMMN_02800 411477.PARMER_02166 3.48e-140 395.0 COG0115@1|root,COG0115@2|Bacteria,4NSFJ@976|Bacteroidetes,2FNQJ@200643|Bacteroidia,22YIQ@171551|Porphyromonadaceae 976|Bacteroidetes EH Amino-transferase class IV - - 4.1.3.38 ko:K02619 ko00790,map00790 - R05553 RC01843,RC02148 ko00000,ko00001,ko01000 - - - Aminotran_4 PHJFGMMN_02801 411477.PARMER_02167 6.21e-241 662.0 COG0147@1|root,COG0147@2|Bacteria,4NFKB@976|Bacteroidetes,2FMRN@200643|Bacteroidia,22WC0@171551|Porphyromonadaceae 976|Bacteroidetes EH component I pabB - 2.6.1.85 ko:K01665 ko00790,map00790 - R01716 RC00010,RC01418 ko00000,ko00001,ko01000 - - - Chorismate_bind PHJFGMMN_02802 411477.PARMER_02168 1.37e-216 597.0 COG0388@1|root,COG0388@2|Bacteria,4NEME@976|Bacteroidetes,2FMCZ@200643|Bacteroidia,22W1N@171551|Porphyromonadaceae 976|Bacteroidetes S Hydrolase, carbon-nitrogen family pabB - 3.5.1.53 ko:K12251 ko00330,ko01100,map00330,map01100 - R01152 RC00096 ko00000,ko00001,ko01000 - - - CN_hydrolase PHJFGMMN_02803 411477.PARMER_02169 7.72e-257 703.0 COG2957@1|root,COG2957@2|Bacteria,4NGF8@976|Bacteroidetes,2FMQH@200643|Bacteroidia,22X7U@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the agmatine deiminase family aguA - 3.5.3.12 ko:K10536 ko00330,ko01100,map00330,map01100 - R01416 RC00177 ko00000,ko00001,ko01000 - - - PAD_porph PHJFGMMN_02804 411477.PARMER_02170 0.0 1030.0 COG3831@1|root,COG3831@2|Bacteria,4NJPG@976|Bacteroidetes,2FPJ3@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - WGR PHJFGMMN_02806 411477.PARMER_02173 3.27e-92 269.0 COG3666@1|root,COG3666@2|Bacteria,4NEDD@976|Bacteroidetes,2FNIQ@200643|Bacteroidia,22WUY@171551|Porphyromonadaceae 976|Bacteroidetes L COG3666 Transposase and inactivated derivatives - - - - - - - - - - - - DDE_Tnp_1,DDE_Tnp_1_6,DUF772 PHJFGMMN_02807 411477.PARMER_02174 6.68e-282 772.0 COG3666@1|root,COG3666@2|Bacteria,4NEDD@976|Bacteroidetes,2FNIQ@200643|Bacteroidia,22WUY@171551|Porphyromonadaceae 976|Bacteroidetes L COG3666 Transposase and inactivated derivatives - - - - - - - - - - - - DDE_Tnp_1,DDE_Tnp_1_6,DUF772 PHJFGMMN_02808 411477.PARMER_02175 2.47e-112 322.0 COG0783@1|root,COG0783@2|Bacteria,4NQDD@976|Bacteroidetes,2FP8D@200643|Bacteroidia,22Y0J@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the Dps family dps - - ko:K04047 - - - - ko00000,ko03036 - - - Ferritin PHJFGMMN_02809 411477.PARMER_02178 9.66e-221 608.0 COG0583@1|root,COG0583@2|Bacteria,4NGZ5@976|Bacteroidetes,2FNH6@200643|Bacteroidia,22X0D@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator oxyR - - ko:K04761 ko02026,map02026 - - - ko00000,ko00001,ko03000 - - - HTH_1,LysR_substrate PHJFGMMN_02810 411477.PARMER_02179 3.18e-201 557.0 COG0077@1|root,COG0077@2|Bacteria,4NEEK@976|Bacteroidetes,2FNHW@200643|Bacteroidia,22XE0@171551|Porphyromonadaceae 976|Bacteroidetes E Prephenate dehydratase pheA - 4.2.1.51 ko:K04518 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00024 R00691,R01373 RC00360 ko00000,ko00001,ko00002,ko01000 - - - PDT PHJFGMMN_02811 411477.PARMER_02181 1.01e-300 818.0 COG0436@1|root,COG0436@2|Bacteria,4NF2E@976|Bacteroidetes,2FN0N@200643|Bacteroidia,22X91@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase class I and II dapL - 2.6.1.83 ko:K10206,ko:K14261 ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230 M00527 R07613 RC00006,RC01847 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2 PHJFGMMN_02812 411477.PARMER_02182 9.43e-259 709.0 COG1605@1|root,COG2876@1|root,COG1605@2|Bacteria,COG2876@2|Bacteria,4NDU4@976|Bacteroidetes,2FPF1@200643|Bacteroidia,22WB4@171551|Porphyromonadaceae 976|Bacteroidetes E Cytochrome C4 pheB - 5.4.99.5 ko:K04516 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00024,M00025 R01715 RC03116 ko00000,ko00001,ko00002,ko01000 - - - CM_2,DAHP_synth_1 PHJFGMMN_02813 411477.PARMER_02183 9.79e-184 511.0 COG0287@1|root,COG0287@2|Bacteria,4NIUC@976|Bacteroidetes,2FMD4@200643|Bacteroidia,22W24@171551|Porphyromonadaceae 976|Bacteroidetes E Prephenate dehydrogenase tyrA - 1.3.1.12 ko:K00210 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 M00025 R01728 RC00125 ko00000,ko00001,ko00002,ko01000 - - - PDH PHJFGMMN_02814 411477.PARMER_02184 4.14e-132 374.0 COG0558@1|root,COG0558@2|Bacteria,4NNTN@976|Bacteroidetes 976|Bacteroidetes I Domain of unknown function (DUF4833) - - - - - - - - - - - - DUF4833 PHJFGMMN_02815 411477.PARMER_02186 0.0 1377.0 COG0550@1|root,COG0550@2|Bacteria,4NE6R@976|Bacteroidetes,2FN9D@200643|Bacteroidia,22W25@171551|Porphyromonadaceae 976|Bacteroidetes L DNA topoisomerase III topB - 5.99.1.2 ko:K03169 - - - - ko00000,ko01000,ko03032 - - - Topoisom_bac,Toprim PHJFGMMN_02816 470145.BACCOP_02352 4.58e-142 405.0 2DM9D@1|root,328C5@2|Bacteria,4NPRC@976|Bacteroidetes,2FRTC@200643|Bacteroidia,4AMP2@815|Bacteroidaceae 976|Bacteroidetes S COG NOG37815 non supervised orthologous group - - - - - - - - - - - - DDE_Tnp_1 PHJFGMMN_02817 411477.PARMER_02188 1.32e-121 346.0 COG1443@1|root,COG1443@2|Bacteria,4NJUP@976|Bacteroidetes,2FNMR@200643|Bacteroidia,22XUF@171551|Porphyromonadaceae 976|Bacteroidetes I NUDIX domain - - - - - - - - - - - - IspA,NUDIX PHJFGMMN_02818 411477.PARMER_02189 6.27e-293 798.0 COG0138@1|root,COG0138@2|Bacteria,4NIY8@976|Bacteroidetes,2FMYP@200643|Bacteroidia,22ZIN@171551|Porphyromonadaceae 976|Bacteroidetes F AICARFT/IMPCHase bienzyme purH2 - 2.1.2.3,3.5.4.10 ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 M00048 R01127,R04560 RC00026,RC00263,RC00456 ko00000,ko00001,ko00002,ko01000,ko04147 - - - AICARFT_IMPCHas PHJFGMMN_02819 1287476.HMPREF1651_05880 8.01e-295 804.0 COG4974@1|root,COG4974@2|Bacteria,4PKZ8@976|Bacteroidetes,2FQN8@200643|Bacteroidia 976|Bacteroidetes L Arm DNA-binding domain - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_02820 1287476.HMPREF1651_05885 3.89e-84 248.0 COG3943@1|root,COG3943@2|Bacteria,4NQ20@976|Bacteroidetes,2FS6A@200643|Bacteroidia 976|Bacteroidetes S COG3943, virulence protein - - - - - - - - - - - - - PHJFGMMN_02822 1122992.CBQQ010000016_gene578 0.0 926.0 2AA34@1|root,30ZBU@2|Bacteria,4PDIC@976|Bacteroidetes,2FVXA@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02824 411477.PARMER_02191 5e-224 617.0 COG2006@1|root,COG2006@2|Bacteria,4NH1F@976|Bacteroidetes,2FP1X@200643|Bacteroidia,22X7D@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF362) - - - - - - - - - - - - DUF362,TAT_signal PHJFGMMN_02825 411477.PARMER_02192 0.0 1015.0 COG0348@1|root,COG1143@1|root,COG0348@2|Bacteria,COG1143@2|Bacteria,4NHSX@976|Bacteroidetes,2FN5F@200643|Bacteroidia,22W4S@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S binding domain - - - - - - - - - - - - Fer4,Fer4_5,Fer4_7,Fer4_9 PHJFGMMN_02826 411477.PARMER_02193 3.28e-261 715.0 COG0343@1|root,COG0343@2|Bacteria,4NE15@976|Bacteroidetes,2FMUM@200643|Bacteroidia,22VYI@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) tgt - 2.4.2.29 ko:K00773 - - R03789,R10209 RC00063 ko00000,ko01000,ko03016 - - - TGT PHJFGMMN_02827 411477.PARMER_02194 3.09e-246 677.0 COG0795@1|root,COG0795@2|Bacteria,4NF8Y@976|Bacteroidetes,2FM2K@200643|Bacteroidia,22WPG@171551|Porphyromonadaceae 976|Bacteroidetes S Permease, YjgP YjgQ family lptG - - ko:K11720 ko02010,map02010 M00320 - - ko00000,ko00001,ko00002,ko02000 1.B.42.1 - - YjgP_YjgQ PHJFGMMN_02830 411477.PARMER_02198 6.16e-237 652.0 2DNFS@1|root,32XAA@2|Bacteria,4NSH2@976|Bacteroidetes,2G1KM@200643|Bacteroidia,230PY@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4925) - - - - - - - - - - - - DUF4925 PHJFGMMN_02831 411477.PARMER_02199 3.17e-314 857.0 COG1538@1|root,COG1538@2|Bacteria,4NFTV@976|Bacteroidetes,2FMYV@200643|Bacteroidia,22XF0@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP PHJFGMMN_02832 411477.PARMER_02200 0.0 1981.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FMG1@200643|Bacteroidia,22W2A@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran PHJFGMMN_02833 411477.PARMER_02201 2.8e-255 700.0 COG0845@1|root,COG0845@2|Bacteria,4NE7P@976|Bacteroidetes,2FPFR@200643|Bacteroidia,22WYZ@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - Biotin_lipoyl_2,HlyD_3 PHJFGMMN_02834 411477.PARMER_02202 0.0 2626.0 COG1501@1|root,COG1501@2|Bacteria,4NE1H@976|Bacteroidetes,2FQU9@200643|Bacteroidia,22W8U@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF5110) - - - - - - - - - - - - Cohesin,DUF4968,DUF5110,F5_F8_type_C,Gal_mutarotas_2,Glyco_hydro_31,fn3 PHJFGMMN_02835 411477.PARMER_02203 0.0 1192.0 COG1165@1|root,COG1165@2|Bacteria,4NETZ@976|Bacteroidetes,2FMSK@200643|Bacteroidia,22W02@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) menD - 2.2.1.9 ko:K02551 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R08165 RC02186 ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C,TPP_enzyme_M_2,TPP_enzyme_N PHJFGMMN_02836 411477.PARMER_02204 1.03e-198 550.0 COG0447@1|root,COG0447@2|Bacteria,4NDXT@976|Bacteroidetes,2FMME@200643|Bacteroidia,22VYD@171551|Porphyromonadaceae 976|Bacteroidetes H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) menB - 4.1.3.36 ko:K01661 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R07263 RC01923 ko00000,ko00001,ko00002,ko01000 - - - ECH_1 PHJFGMMN_02837 411477.PARMER_02205 1.2e-262 718.0 COG4948@1|root,COG4948@2|Bacteria,4NEBX@976|Bacteroidetes,2FMXR@200643|Bacteroidia,22X1A@171551|Porphyromonadaceae 976|Bacteroidetes M Mandelate racemase muconate lactonizing enzyme menC - - - - - - - - - - - MR_MLE_C PHJFGMMN_02838 411477.PARMER_02206 6.5e-269 736.0 COG0318@1|root,COG0318@2|Bacteria,4NEXK@976|Bacteroidetes,2FM16@200643|Bacteroidia,22X5D@171551|Porphyromonadaceae 976|Bacteroidetes IQ O-succinylbenzoic acid--CoA ligase menE - 6.2.1.26 ko:K01911 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R04030 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 - - - AMP-binding,AMP-binding_C PHJFGMMN_02839 411477.PARMER_02207 0.0 1338.0 COG1305@1|root,COG1305@2|Bacteria,4NI6P@976|Bacteroidetes,2FPYJ@200643|Bacteroidia,22XFT@171551|Porphyromonadaceae 976|Bacteroidetes E Domain of Unknown Function with PDB structure (DUF3857) - - - - - - - - - - - - DUF3857,DUF3858,Transglut_core PHJFGMMN_02840 411477.PARMER_02208 0.0 1113.0 COG1305@1|root,COG1305@2|Bacteria,4NIJF@976|Bacteroidetes,2FQJU@200643|Bacteroidia,22XJ6@171551|Porphyromonadaceae 976|Bacteroidetes E Domain of Unknown Function with PDB structure (DUF3858) - - - - - - - - - - - - DUF3857,DUF3858,Transglut_core PHJFGMMN_02841 411477.PARMER_02209 0.0 1680.0 COG3525@1|root,COG3525@2|Bacteria,4NHNU@976|Bacteroidetes,2FMM8@200643|Bacteroidia,22X64@171551|Porphyromonadaceae 976|Bacteroidetes G beta-N-acetylglucosaminidase - GO:0003674,GO:0003824,GO:0004553,GO:0004563,GO:0005488,GO:0005515,GO:0005975,GO:0006464,GO:0006517,GO:0006807,GO:0008150,GO:0008152,GO:0009100,GO:0009987,GO:0015929,GO:0016231,GO:0016787,GO:0016798,GO:0019538,GO:0036211,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901135,GO:1901564 3.2.1.35 ko:K01197 ko00531,ko01100,map00531,map01100 M00076,M00077 R07824,R07825,R10905 - ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042 - - - F5_F8_type_C,Glyco_hydro_20b,NAGidase PHJFGMMN_02842 411477.PARMER_02210 1.65e-241 662.0 COG0673@1|root,COG0673@2|Bacteria,4NE07@976|Bacteroidetes,2FNUN@200643|Bacteroidia,22X96@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase NAD-binding domain protein - - - - - - - - - - - - GFO_IDH_MocA PHJFGMMN_02843 411477.PARMER_02211 1.31e-307 837.0 COG3391@1|root,COG3391@2|Bacteria,4NVA3@976|Bacteroidetes,2FMCK@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4934) - - - - - - - - - - - - DUF4934,DUF5128 PHJFGMMN_02844 411477.PARMER_02212 1.06e-258 711.0 COG4219@1|root,COG4219@2|Bacteria,4NDWS@976|Bacteroidetes,2FNCU@200643|Bacteroidia,22W9Z@171551|Porphyromonadaceae 976|Bacteroidetes KT BlaR1 peptidase M56 - - - - - - - - - - - - CarbopepD_reg_2,Peptidase_M56,Plug,TonB_C PHJFGMMN_02845 411477.PARMER_02213 1.63e-82 246.0 COG3682@1|root,COG3682@2|Bacteria,4NT4V@976|Bacteroidetes,2FSIM@200643|Bacteroidia,22Y78@171551|Porphyromonadaceae 976|Bacteroidetes K Penicillinase repressor - - - - - - - - - - - - Penicillinase_R PHJFGMMN_02846 411477.PARMER_02215 1.23e-192 535.0 2B69Q@1|root,31Z76@2|Bacteria,4P4FW@976|Bacteroidetes,2FTT6@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02847 411477.PARMER_02219 2.22e-60 186.0 COG0776@1|root,COG0776@2|Bacteria,4P9B5@976|Bacteroidetes 976|Bacteroidetes L Bacterial DNA-binding protein - - - - - - - - - - - - Bac_DNA_binding PHJFGMMN_02848 411477.PARMER_02220 0.0 1673.0 COG1506@1|root,COG1506@2|Bacteria,4NE2Q@976|Bacteroidetes,2FPZU@200643|Bacteroidia,22W8N@171551|Porphyromonadaceae 976|Bacteroidetes E Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - - - - - - - - - - DPPIV_N,Peptidase_S9 PHJFGMMN_02849 411477.PARMER_02221 6.95e-95 277.0 COG0636@1|root,COG0636@2|Bacteria,4NQ9J@976|Bacteroidetes,2G39F@200643|Bacteroidia,22Y8P@171551|Porphyromonadaceae 976|Bacteroidetes C ATPase, subunit K - - - ko:K02124 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - ATP-synt_C PHJFGMMN_02850 411477.PARMER_02222 0.0 1176.0 COG1269@1|root,COG1269@2|Bacteria,4NGJ9@976|Bacteroidetes,2FMC6@200643|Bacteroidia,22X61@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the V-ATPase 116 kDa subunit family - - - ko:K02123 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - V_ATPase_I PHJFGMMN_02851 411477.PARMER_02223 1.61e-130 372.0 COG1394@1|root,COG1394@2|Bacteria,4NMF2@976|Bacteroidetes,2FM0M@200643|Bacteroidia,22X0S@171551|Porphyromonadaceae 976|Bacteroidetes C ATP synthase subunit D - - - ko:K02120 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - ATP-synt_D PHJFGMMN_02852 411477.PARMER_02224 1.14e-315 860.0 COG1156@1|root,COG1156@2|Bacteria,4NIH8@976|Bacteroidetes,2FNPF@200643|Bacteroidia,22WY4@171551|Porphyromonadaceae 976|Bacteroidetes C the B subunit is part of the catalytic core of the ATP synthase complex ntpB - - ko:K02118 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - ATP-synt_ab,ATP-synt_ab_N PHJFGMMN_02853 411477.PARMER_02225 0.0 1166.0 COG1155@1|root,COG1155@2|Bacteria,4NIB6@976|Bacteroidetes,2FMQ6@200643|Bacteroidia,22WQG@171551|Porphyromonadaceae 976|Bacteroidetes C Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit atpA - 3.6.3.14,3.6.3.15 ko:K02117 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002,ko01000 3.A.2.2,3.A.2.3 - - ATP-synt_ab,ATP-synt_ab_N,ATP-synt_ab_Xtn PHJFGMMN_02854 411477.PARMER_02226 2.56e-216 596.0 COG1527@1|root,COG1527@2|Bacteria,4NMSU@976|Bacteroidetes,2G2KA@200643|Bacteroidia,22Y3R@171551|Porphyromonadaceae 976|Bacteroidetes C Protein of unknown function (DUF2764) - - - - - - - - - - - - DUF2764 PHJFGMMN_02855 411477.PARMER_02227 2.46e-115 333.0 COG1390@1|root,COG1390@2|Bacteria,4NP16@976|Bacteroidetes,2FMD8@200643|Bacteroidia,22Y2E@171551|Porphyromonadaceae 976|Bacteroidetes C subunit E - - - ko:K02121 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - vATP-synt_E PHJFGMMN_02857 411477.PARMER_02231 2.55e-121 345.0 COG0454@1|root,COG0456@2|Bacteria,4NQVT@976|Bacteroidetes,2FPFH@200643|Bacteroidia,22YJN@171551|Porphyromonadaceae 976|Bacteroidetes K Acetyltransferase (GNAT) domain paiA - - - - - - - - - - - Acetyltransf_1,Acetyltransf_10 PHJFGMMN_02858 411477.PARMER_02232 0.0 1025.0 COG1492@1|root,COG1492@2|Bacteria,4NG0W@976|Bacteroidetes,2G2ZS@200643|Bacteroidia,22X6B@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation cobQ - 6.3.5.10 ko:K02232 ko00860,ko01100,map00860,map01100 M00122 R05225 RC00010,RC01302 ko00000,ko00001,ko00002,ko01000 - - - AAA_26,CbiA,GATase_3 PHJFGMMN_02859 411477.PARMER_02233 3.99e-129 366.0 COG0250@1|root,COG0250@2|Bacteria,4NSVU@976|Bacteroidetes,2FTNR@200643|Bacteroidia,22Y7C@171551|Porphyromonadaceae 976|Bacteroidetes K Transcription termination factor nusG - - - - - - - - - - - - KOW,NusG PHJFGMMN_02861 411477.PARMER_02235 0.0 1581.0 COG3537@1|root,COG3537@2|Bacteria,4NI5B@976|Bacteroidetes,2FMQ3@200643|Bacteroidia,22X79@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 PHJFGMMN_02862 411477.PARMER_02236 0.0 1607.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMXD@200643|Bacteroidia,22WP0@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 PHJFGMMN_02863 411477.PARMER_02237 2.84e-265 728.0 COG1538@1|root,COG1538@2|Bacteria,4NIE8@976|Bacteroidetes,2FNS5@200643|Bacteroidia,22X81@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP PHJFGMMN_02864 411477.PARMER_02238 0.0 1900.0 COG3696@1|root,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,2FMH3@200643|Bacteroidia,22VYK@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family czcA - - ko:K07787 ko02020,map02020 - - - ko00000,ko00001,ko02000 2.A.6.1.4 - - ACR_tran PHJFGMMN_02865 411477.PARMER_02239 6.19e-266 731.0 COG0845@1|root,COG0845@2|Bacteria,4NF6Y@976|Bacteroidetes,2FMZD@200643|Bacteroidia,22X56@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - HlyD_3,HlyD_D23 PHJFGMMN_02866 411477.PARMER_02241 1.88e-73 221.0 2BXNV@1|root,2ZTIF@2|Bacteria,4P8CS@976|Bacteroidetes,2G1RS@200643|Bacteroidia,2314W@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG32090 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_02867 411477.PARMER_02242 1.75e-181 505.0 COG1635@1|root,COG1635@2|Bacteria,4NJ8N@976|Bacteroidetes,2FMZW@200643|Bacteroidia,22Z30@171551|Porphyromonadaceae 976|Bacteroidetes H Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur thi4 - - ko:K03146 ko00730,ko01100,map00730,map01100 - R10685 RC00033,RC03253,RC03254 ko00000,ko00001 - - - Thi4 PHJFGMMN_02868 411477.PARMER_02243 1.64e-151 426.0 COG1102@1|root,COG1102@2|Bacteria,4NN0M@976|Bacteroidetes,2G0H9@200643|Bacteroidia,22XVP@171551|Porphyromonadaceae 976|Bacteroidetes F Cytidylate kinase-like family - - - - - - - - - - - - Cytidylate_kin2 PHJFGMMN_02869 411477.PARMER_02244 4.75e-308 841.0 COG0534@1|root,COG0534@2|Bacteria,4NDUF@976|Bacteroidetes,2FMX6@200643|Bacteroidia,22WP6@171551|Porphyromonadaceae 976|Bacteroidetes V Multidrug transporter MatE - - - - - - - - - - - - MatE PHJFGMMN_02870 411477.PARMER_02245 3.28e-110 317.0 COG1956@1|root,COG1956@2|Bacteria,4NM6D@976|Bacteroidetes,2FS26@200643|Bacteroidia,22XVQ@171551|Porphyromonadaceae 976|Bacteroidetes T GAF domain msrC - 1.8.4.14 ko:K08968 ko00270,map00270 - R02025 RC00639 ko00000,ko00001,ko01000 - - - GAF,GAF_2 PHJFGMMN_02871 411477.PARMER_02246 0.0 3655.0 COG2373@1|root,COG2373@2|Bacteria,4NEW9@976|Bacteroidetes,2FP6Z@200643|Bacteroidia,22WXY@171551|Porphyromonadaceae 976|Bacteroidetes S Alpha-2-Macroglobulin - - - ko:K06894 - - - - ko00000 - - - A2M,A2M_N,A2M_N_2,MG1,Thiol-ester_cl PHJFGMMN_02872 411477.PARMER_02247 7.62e-216 595.0 COG0667@1|root,COG0667@2|Bacteria,4NP8D@976|Bacteroidetes,2FTGW@200643|Bacteroidia,231TR@171551|Porphyromonadaceae 976|Bacteroidetes C Aldo/keto reductase family - - - - - - - - - - - - Aldo_ket_red PHJFGMMN_02873 411477.PARMER_02248 0.0 868.0 COG3004@1|root,COG3004@2|Bacteria,4NFC4@976|Bacteroidetes,2FMP4@200643|Bacteroidia,22W9P@171551|Porphyromonadaceae 976|Bacteroidetes P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons nhaA - - ko:K03313 - - - - ko00000,ko02000 2.A.33.1 - - Na_H_antiport_1 PHJFGMMN_02874 411477.PARMER_02249 3.54e-277 759.0 COG0475@1|root,COG0475@2|Bacteria,4NGFZ@976|Bacteroidetes,2FNHH@200643|Bacteroidia,22XGX@171551|Porphyromonadaceae 976|Bacteroidetes P Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - Na_H_Exchanger PHJFGMMN_02875 411477.PARMER_02250 7.83e-140 395.0 COG1739@1|root,COG1739@2|Bacteria,4NF0D@976|Bacteroidetes,2FQHX@200643|Bacteroidia,22WR7@171551|Porphyromonadaceae 976|Bacteroidetes S YigZ family yigZ - - - - - - - - - - - UPF0029 PHJFGMMN_02876 411477.PARMER_02251 1.75e-47 151.0 2FBRV@1|root,343WN@2|Bacteria,4P5W1@976|Bacteroidetes,2FUF0@200643|Bacteroidia,230YW@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02877 411477.PARMER_02252 0.0 1870.0 COG0178@1|root,COG0178@2|Bacteria,4NFQU@976|Bacteroidetes,2FNMG@200643|Bacteroidia,22W2F@171551|Porphyromonadaceae 976|Bacteroidetes L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate uvrA2 - - ko:K03701 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - ABC_tran PHJFGMMN_02878 411477.PARMER_02253 1.07e-237 653.0 COG0741@1|root,COG0741@2|Bacteria,4NH4W@976|Bacteroidetes,2FM9R@200643|Bacteroidia,22W65@171551|Porphyromonadaceae 976|Bacteroidetes M Transglycosylase SLT domain mltD_2 - - - - - - - - - - - SLT PHJFGMMN_02879 411477.PARMER_02254 0.0 930.0 COG3291@1|root,COG3291@2|Bacteria,4NU2U@976|Bacteroidetes,2FNZM@200643|Bacteroidia,22XX6@171551|Porphyromonadaceae 976|Bacteroidetes S C-terminal domain of CHU protein family - - - - - - - - - - - - CHU_C PHJFGMMN_02880 411477.PARMER_02256 0.0 901.0 COG1109@1|root,COG1109@2|Bacteria,4NG3H@976|Bacteroidetes,2FM6E@200643|Bacteroidia,22W7N@171551|Porphyromonadaceae 976|Bacteroidetes G Phosphoglucosamine mutase glmM - 5.4.2.8 ko:K01840 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 M00114 R01818 RC00408 ko00000,ko00001,ko00002,ko01000 - - - PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV PHJFGMMN_02881 411477.PARMER_02257 4.41e-137 387.0 2BU91@1|root,32PII@2|Bacteria,4NS5T@976|Bacteroidetes,2G1SX@200643|Bacteroidia,2318V@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4827) - - - - - - - - - - - - DUF4827 PHJFGMMN_02882 411477.PARMER_02258 4.4e-260 712.0 COG0618@1|root,COG0618@2|Bacteria,4NEXE@976|Bacteroidetes,2FP4J@200643|Bacteroidia,22VYP@171551|Porphyromonadaceae 976|Bacteroidetes S domain protein nrnA - 3.1.13.3,3.1.3.7 ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 - R00188,R00508 RC00078 ko00000,ko00001,ko01000,ko03400 - - - DHH,DHHA1 PHJFGMMN_02883 411477.PARMER_02259 6.96e-301 821.0 COG0658@1|root,COG0658@2|Bacteria,4NEJH@976|Bacteroidetes,2FPT6@200643|Bacteroidia,22VXE@171551|Porphyromonadaceae 976|Bacteroidetes S ComEC Rec2-related protein - - - ko:K02238 - M00429 - - ko00000,ko00002,ko02044 3.A.11.1,3.A.11.2 - - Competence,DUF4131 PHJFGMMN_02884 411477.PARMER_02260 2.15e-153 431.0 COG0036@1|root,COG0036@2|Bacteria,4NDXB@976|Bacteroidetes,2FM7Z@200643|Bacteroidia,22WA0@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the ribulose-phosphate 3-epimerase family rpe - 5.1.3.1 ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01529 RC00540 ko00000,ko00001,ko00002,ko01000 - - - Ribul_P_3_epim PHJFGMMN_02886 411477.PARMER_00355 1.41e-135 384.0 COG1595@1|root,COG1595@2|Bacteria,4NF93@976|Bacteroidetes,2FNJV@200643|Bacteroidia,22W2N@171551|Porphyromonadaceae 976|Bacteroidetes K Belongs to the sigma-70 factor family. ECF subfamily rpoE - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4,Sigma70_r4_2 PHJFGMMN_02887 411477.PARMER_00357 0.0 1113.0 COG2067@1|root,COG2067@2|Bacteria,4NFS7@976|Bacteroidetes,2FM7S@200643|Bacteroidia,22WCW@171551|Porphyromonadaceae 976|Bacteroidetes I Outer membrane protein transport protein, Ompp1 FadL TodX - - - - - - - - - - - - Toluene_X PHJFGMMN_02888 411477.PARMER_00358 9.27e-157 459.0 2DM3I@1|root,31JQ3@2|Bacteria,4NRM4@976|Bacteroidetes,2FM1R@200643|Bacteroidia,231KE@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location OuterMembrane, score - - - - - - - - - - - - - PHJFGMMN_02889 411477.PARMER_00361 6.8e-129 366.0 COG1595@1|root,COG1595@2|Bacteria,4NR0P@976|Bacteroidetes,2FN1H@200643|Bacteroidia 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_02890 411477.PARMER_00362 4.25e-309 842.0 COG1470@1|root,COG1470@2|Bacteria,4NGFF@976|Bacteroidetes,2FN5A@200643|Bacteroidia,22X2I@171551|Porphyromonadaceae 976|Bacteroidetes S CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2 PHJFGMMN_02891 411477.PARMER_00363 1.68e-127 362.0 COG1595@1|root,COG1595@2|Bacteria,4NNBY@976|Bacteroidetes,2G33Y@200643|Bacteroidia,231CQ@171551|Porphyromonadaceae 976|Bacteroidetes K ECF sigma factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_02892 411477.PARMER_00364 3.85e-198 549.0 COG3712@1|root,COG3712@2|Bacteria,4NMYI@976|Bacteroidetes,2FRE6@200643|Bacteroidia,22Y3D@171551|Porphyromonadaceae 976|Bacteroidetes PT FecR protein - - - - - - - - - - - - FecR PHJFGMMN_02893 999419.HMPREF1077_03536 0.0 1011.0 COG1470@1|root,COG1470@2|Bacteria,4NNH8@976|Bacteroidetes,2FP8N@200643|Bacteroidia,22XU4@171551|Porphyromonadaceae 976|Bacteroidetes S CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2 PHJFGMMN_02895 411477.PARMER_00366 1.74e-78 233.0 COG0720@1|root,COG0720@2|Bacteria,4NQYM@976|Bacteroidetes,2FSMG@200643|Bacteroidia,22YHS@171551|Porphyromonadaceae 976|Bacteroidetes H 6-pyruvoyl tetrahydropterin synthase queD - 4.1.2.50,4.2.3.12 ko:K01737 ko00790,ko01100,map00790,map01100 M00842,M00843 R04286,R09959 RC01117,RC02846,RC02847 ko00000,ko00001,ko00002,ko01000,ko03016 - - - PTPS PHJFGMMN_02896 411477.PARMER_00367 9.42e-137 385.0 COG0602@1|root,COG0602@2|Bacteria,4NESC@976|Bacteroidetes,2FPNA@200643|Bacteroidia,22Y8Q@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds queE - 4.3.99.3 ko:K10026 ko00790,ko01100,map00790,map01100 - R10002 RC02989 ko00000,ko00001,ko01000,ko03016 - - - Fer4_12,Fer4_14,Radical_SAM PHJFGMMN_02897 411477.PARMER_00368 0.0 901.0 COG0044@1|root,COG0044@2|Bacteria,4NE3T@976|Bacteroidetes,2FN4X@200643|Bacteroidia,22WH4@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides pyrC - 3.5.2.3 ko:K01465 ko00240,ko01100,map00240,map01100 M00051 R01993 RC00632 ko00000,ko00001,ko00002,ko01000 - - - Amidohydro_1 PHJFGMMN_02898 411477.PARMER_00369 0.0 1924.0 COG5492@1|root,COG5492@2|Bacteria,4NHMV@976|Bacteroidetes,2FM12@200643|Bacteroidia,22VVN@171551|Porphyromonadaceae 976|Bacteroidetes N Polysaccharide lyase family 8, N terminal alpha-helical domain - - 4.2.2.5 ko:K19049 - - - - ko00000,ko01000 - PL8 - CBM9_1,Lyase_8,Lyase_8_C,Lyase_8_N PHJFGMMN_02899 411477.PARMER_00370 0.0 1018.0 COG0554@1|root,COG0554@2|Bacteria,4NFUH@976|Bacteroidetes,2G32Z@200643|Bacteroidia,22WN8@171551|Porphyromonadaceae 976|Bacteroidetes F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate glpK GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 - R00847 RC00002,RC00017 ko00000,ko00001,ko01000,ko04147 - - - FGGY_C,FGGY_N PHJFGMMN_02901 411477.PARMER_00372 0.0 1575.0 COG5009@1|root,COG5009@2|Bacteria,4NECJ@976|Bacteroidetes,2FNAU@200643|Bacteroidia,22W8Z@171551|Porphyromonadaceae 976|Bacteroidetes M Penicillin-binding Protein mrcA - 2.4.1.129,3.4.16.4 ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 - - - ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 - Transgly,Transpeptidase PHJFGMMN_02902 411477.PARMER_00373 2.97e-226 626.0 COG2855@1|root,COG2855@2|Bacteria,4NES6@976|Bacteroidetes,2FPI8@200643|Bacteroidia,22VXH@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the UPF0324 family - - - - - - - - - - - - Cons_hypoth698 PHJFGMMN_02903 411477.PARMER_00374 3.06e-206 571.0 COG0583@1|root,COG0583@2|Bacteria,4NGHS@976|Bacteroidetes,2FN5V@200643|Bacteroidia,22W95@171551|Porphyromonadaceae 976|Bacteroidetes K LysR substrate binding domain cysL - - - - - - - - - - - HTH_1,LysR_substrate PHJFGMMN_02906 411477.PARMER_00378 0.0 2135.0 COG2982@1|root,COG2982@2|Bacteria,4NEJQ@976|Bacteroidetes,2FN9V@200643|Bacteroidia,22WNN@171551|Porphyromonadaceae 976|Bacteroidetes M AsmA-like C-terminal region - - - - - - - - - - - - AsmA,AsmA_2 PHJFGMMN_02907 411477.PARMER_00379 4.36e-287 782.0 COG1088@1|root,COG1088@2|Bacteria,4NE9V@976|Bacteroidetes,2FMUH@200643|Bacteroidia,22W2K@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily rfbB - 4.2.1.46 ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 M00793 R06513 RC00402 ko00000,ko00001,ko00002,ko01000 - - - GDP_Man_Dehyd PHJFGMMN_02908 411477.PARMER_00381 1.52e-158 444.0 COG1898@1|root,COG1898@2|Bacteria,4NNKW@976|Bacteroidetes,2FMBP@200643|Bacteroidia,22XD8@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose rfbC - 5.1.3.13 ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R06514 RC01531 ko00000,ko00001,ko00002,ko01000 - - - dTDP_sugar_isom PHJFGMMN_02911 411477.PARMER_00384 1.77e-196 544.0 COG1237@1|root,COG1237@2|Bacteria,4NPT5@976|Bacteroidetes,2FNG8@200643|Bacteroidia,230V9@171551|Porphyromonadaceae 976|Bacteroidetes S Metallo-beta-lactamase superfamily - - 2.5.1.105 ko:K06897 ko00790,map00790 - R10339 RC00121 ko00000,ko00001,ko01000 - - - Lactamase_B PHJFGMMN_02912 411477.PARMER_00385 0.0 1363.0 COG4948@1|root,COG4948@2|Bacteria,4PKP3@976|Bacteroidetes,2FMI4@200643|Bacteroidia,22W6G@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl-hydrolase 97 C-terminal, oligomerisation - - 3.2.1.20 ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 - R00028,R00801,R00802,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 - GH31 - GH97_C,GH97_N,Glyco_hydro_97 PHJFGMMN_02913 411477.PARMER_00386 0.0 1204.0 COG2755@1|root,COG2755@2|Bacteria,4NEAZ@976|Bacteroidetes,2FM11@200643|Bacteroidia,22YB8@171551|Porphyromonadaceae 976|Bacteroidetes E N-terminus of Esterase_SGNH_hydro-type - - - - - - - - - - - - GxDLY,Lipase_GDSL_2,Lipase_GDSL_3 PHJFGMMN_02914 411477.PARMER_00388 1.4e-194 538.0 COG1235@1|root,COG1235@2|Bacteria,4NDWB@976|Bacteroidetes,2FN0W@200643|Bacteroidia,22W69@171551|Porphyromonadaceae 976|Bacteroidetes S Metallo-beta-lactamase superfamily lipB - 3.1.4.55 ko:K06167 ko00440,map00440 - R10205 RC00296 ko00000,ko00001,ko01000 - - - Lactamase_B_2 PHJFGMMN_02915 411477.PARMER_00390 9.62e-247 677.0 COG0812@1|root,COG0812@2|Bacteria,4NE78@976|Bacteroidetes,2FN91@200643|Bacteroidia,22X7N@171551|Porphyromonadaceae 976|Bacteroidetes M Cell wall formation murB - 1.3.1.98 ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 - R03191,R03192 RC02639 ko00000,ko00001,ko01000,ko01011 - - - FAD_binding_4,MurB_C PHJFGMMN_02917 411477.PARMER_00392 6.07e-59 182.0 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation - - - ko:K03530 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding PHJFGMMN_02918 411477.PARMER_00393 2.71e-152 428.0 COG0035@1|root,COG0035@2|Bacteria,4NFZM@976|Bacteroidetes,2FN3M@200643|Bacteroidia,22WRM@171551|Porphyromonadaceae 976|Bacteroidetes F uracil phosphoribosyltransferase upp - 2.4.2.9 ko:K00761 ko00240,ko01100,map00240,map01100 - R00966 RC00063 ko00000,ko00001,ko01000 - - - UPRTase PHJFGMMN_02919 411477.PARMER_00394 0.0 1580.0 COG0642@1|root,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FNIT@200643|Bacteroidia,22WZF@171551|Porphyromonadaceae 976|Bacteroidetes T PAS domain - - - - - - - - - - - - GAF,GAF_2,HATPase_c,HisKA,PAS_3,PAS_4,PAS_8,PAS_9,Response_reg PHJFGMMN_02920 411477.PARMER_00395 0.0 2224.0 COG1413@1|root,COG1413@2|Bacteria,4NEZ7@976|Bacteroidetes,2FPRF@200643|Bacteroidia,22X0G@171551|Porphyromonadaceae 976|Bacteroidetes C Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080,HEAT_2 PHJFGMMN_02921 411477.PARMER_00396 0.0 890.0 COG0673@1|root,COG0673@2|Bacteria,4NGHJ@976|Bacteroidetes,2FPMK@200643|Bacteroidia,22WUI@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C PHJFGMMN_02922 411477.PARMER_00397 3.63e-217 598.0 COG1082@1|root,COG1082@2|Bacteria,4P0UK@976|Bacteroidetes 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2 PHJFGMMN_02923 411477.PARMER_00398 0.0 1211.0 COG1435@1|root,COG1435@2|Bacteria,4NGX8@976|Bacteroidetes,2FPJC@200643|Bacteroidia 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_02924 411477.PARMER_00399 0.0 2361.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_02925 470145.BACCOP_02352 4.58e-142 405.0 2DM9D@1|root,328C5@2|Bacteria,4NPRC@976|Bacteroidetes,2FRTC@200643|Bacteroidia,4AMP2@815|Bacteroidaceae 976|Bacteroidetes S COG NOG37815 non supervised orthologous group - - - - - - - - - - - - DDE_Tnp_1 PHJFGMMN_02927 411477.PARMER_00402 1.95e-134 380.0 COG3712@1|root,COG3712@2|Bacteria,4NKN5@976|Bacteroidetes,2FP6E@200643|Bacteroidia,22Y39@171551|Porphyromonadaceae 976|Bacteroidetes PT FecR protein - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_02929 411477.PARMER_00404 1.42e-289 790.0 COG1409@1|root,COG1409@2|Bacteria,4NG8Q@976|Bacteroidetes,2G35U@200643|Bacteroidia,22ZKG@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase superfamily domain - - - - - - - - - - - - Metallophos,Pur_ac_phosph_N PHJFGMMN_02930 411477.PARMER_00405 0.0 1156.0 COG1435@1|root,COG1435@2|Bacteria,4NFWU@976|Bacteroidetes,2FNY3@200643|Bacteroidia 976|Bacteroidetes F SusD family - - - - - - - - - - - - SusD-like_3,SusD_RagB PHJFGMMN_02931 411477.PARMER_00406 0.0 2237.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FW4E@200643|Bacteroidia,22VUR@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_02932 411477.PARMER_00407 3.88e-106 306.0 COG3712@1|root,COG3712@2|Bacteria 2|Bacteria PT iron ion homeostasis - - - - - - - - - - - - DUF4974 PHJFGMMN_02933 411477.PARMER_00408 2.98e-129 367.0 COG3712@1|root,COG3712@2|Bacteria,4NKN5@976|Bacteroidetes,2FP6E@200643|Bacteroidia,22Y39@171551|Porphyromonadaceae 976|Bacteroidetes PT FecR protein - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_02934 411477.PARMER_00409 6.48e-142 400.0 COG1595@1|root,COG1595@2|Bacteria,4NS12@976|Bacteroidetes,2FQ76@200643|Bacteroidia,230RU@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_02936 411477.PARMER_00412 2.67e-302 823.0 28NIY@1|root,2ZBK8@2|Bacteria,4NM7G@976|Bacteroidetes,2FQNB@200643|Bacteroidia,22XZ1@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02937 411477.PARMER_00413 2.95e-50 159.0 COG0724@1|root,COG0724@2|Bacteria,4NT1J@976|Bacteroidetes 976|Bacteroidetes S PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - - - - - - - - - - RRM_1 PHJFGMMN_02938 411477.PARMER_00415 0.0 873.0 COG1260@1|root,COG1260@2|Bacteria,4NI0F@976|Bacteroidetes,2FMB3@200643|Bacteroidia,22WM9@171551|Porphyromonadaceae 976|Bacteroidetes I Myo-inositol-1-phosphate synthase ino1 - 5.5.1.4 ko:K01858 ko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130 - R07324 RC01804 ko00000,ko00001,ko01000 - - - Inos-1-P_synth,NAD_binding_5 PHJFGMMN_02939 411477.PARMER_00416 2.39e-103 299.0 COG1267@1|root,COG1267@2|Bacteria,4NP7N@976|Bacteroidetes,2FSAM@200643|Bacteroidia,22Y1Q@171551|Porphyromonadaceae 976|Bacteroidetes I Phosphatidylglycerophosphatase A pgpA - 3.1.3.27 ko:K01095 ko00564,ko01100,map00564,map01100 - R02029 RC00017 ko00000,ko00001,ko01000 - - - PgpA PHJFGMMN_02940 411477.PARMER_00417 1.59e-120 343.0 COG2246@1|root,COG2246@2|Bacteria,4NQD6@976|Bacteroidetes,2FRAR@200643|Bacteroidia,22YK2@171551|Porphyromonadaceae 976|Bacteroidetes S GtrA-like protein - - - - - - - - - - - - GtrA PHJFGMMN_02941 411477.PARMER_00418 8.03e-159 445.0 COG0558@1|root,COG0558@2|Bacteria,4NGNI@976|Bacteroidetes,2FM7W@200643|Bacteroidia,22XRI@171551|Porphyromonadaceae 976|Bacteroidetes I Belongs to the CDP-alcohol phosphatidyltransferase class-I family pgsA1 - 2.7.8.5 ko:K00995 ko00564,ko01100,map00564,map01100 - R01801 RC00002,RC00017,RC02795 ko00000,ko00001,ko01000 - - - CDP-OH_P_transf,DUF4833 PHJFGMMN_02942 411477.PARMER_00419 1.02e-228 629.0 COG0671@1|root,COG0671@2|Bacteria,4NHDK@976|Bacteroidetes,2FNI9@200643|Bacteroidia,22WDY@171551|Porphyromonadaceae 976|Bacteroidetes I PAP2 superfamily - - - - - - - - - - - - PAP2_3 PHJFGMMN_02943 999419.HMPREF1077_03577 1.03e-195 542.0 COG1409@1|root,COG1409@2|Bacteria,4NGXX@976|Bacteroidetes,2FPJ6@200643|Bacteroidia,22WTS@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos PHJFGMMN_02944 411477.PARMER_00422 1.05e-154 433.0 294ZR@1|root,2ZSCK@2|Bacteria,4NNYY@976|Bacteroidetes,2FP6D@200643|Bacteroidia,22XYV@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG27188 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_02945 411477.PARMER_00423 5.46e-151 424.0 COG3047@1|root,COG3047@2|Bacteria,4NP9X@976|Bacteroidetes,2FMHB@200643|Bacteroidia,22XWW@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl PHJFGMMN_02946 411477.PARMER_00424 5.69e-154 432.0 28N4A@1|root,2ZB9T@2|Bacteria,4NKZG@976|Bacteroidetes,2FP6K@200643|Bacteroidia,22XPK@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4136) - - - - - - - - - - - - DUF4136 PHJFGMMN_02947 411477.PARMER_00425 1.15e-37 126.0 COG0454@1|root,COG0456@2|Bacteria 2|Bacteria K acetyltransferase - - - - - - - - - - - - Acetyltransf_1,Acetyltransf_10,Transglut_core PHJFGMMN_02948 411477.PARMER_00426 9.88e-110 316.0 COG0454@1|root,COG0456@2|Bacteria,4NVMB@976|Bacteroidetes,2G2SQ@200643|Bacteroidia 976|Bacteroidetes K Acetyltransferase (GNAT) family - - - - - - - - - - - - Acetyltransf_10 PHJFGMMN_02949 999419.HMPREF1077_03581 2.14e-115 335.0 COG2885@1|root,COG2885@2|Bacteria,4NEGF@976|Bacteroidetes,2FNU2@200643|Bacteroidia,22XKZ@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the ompA family - - - - - - - - - - - - Gly-zipper_Omp,OmpA PHJFGMMN_02950 411477.PARMER_00428 6.64e-73 218.0 2C27K@1|root,32XKH@2|Bacteria,4NTIY@976|Bacteroidetes,2FU25@200643|Bacteroidia,22YJY@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_02951 411477.PARMER_00429 0.0 1153.0 COG0514@1|root,COG0514@2|Bacteria,4NEFD@976|Bacteroidetes,2FMT4@200643|Bacteroidia,22VWK@171551|Porphyromonadaceae 976|Bacteroidetes L ATP-dependent DNA helicase RecQ recQ2 - 3.6.4.12 ko:K03654 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,RecQ_Zn_bind PHJFGMMN_02952 411477.PARMER_00430 0.0 1580.0 COG0542@1|root,COG0542@2|Bacteria,4NGEM@976|Bacteroidetes,2FM5N@200643|Bacteroidia,22WE7@171551|Porphyromonadaceae 976|Bacteroidetes O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE clpB - - ko:K03695 ko04213,map04213 - - - ko00000,ko00001,ko03110 - - - AAA,AAA_2,ClpB_D2-small,Clp_N PHJFGMMN_02954 411477.PARMER_00432 4.79e-220 605.0 297R9@1|root,3499M@2|Bacteria,4P66F@976|Bacteroidetes,2FYQ5@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02955 411477.PARMER_00433 1.06e-186 518.0 COG1397@1|root,COG1397@2|Bacteria,4NGM2@976|Bacteroidetes,2G3CY@200643|Bacteroidia,22XRH@171551|Porphyromonadaceae 976|Bacteroidetes O ADP-ribosylglycohydrolase - - - - - - - - - - - - ADP_ribosyl_GH PHJFGMMN_02956 411477.PARMER_00434 7.75e-259 708.0 COG3049@1|root,COG3049@2|Bacteria,4NGDB@976|Bacteroidetes,2FPJ2@200643|Bacteroidia,22WSC@171551|Porphyromonadaceae 976|Bacteroidetes M Linear amide C-N hydrolases, choloylglycine hydrolase family - - 3.5.1.24 ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 - R02797,R03975,R03977,R04486,R04487,R05835 RC00090,RC00096 ko00000,ko00001,ko01000 - - - CBAH PHJFGMMN_02957 411477.PARMER_00436 7.23e-193 533.0 COG0708@1|root,COG0708@2|Bacteria,4NEY3@976|Bacteroidetes,2FNRH@200643|Bacteroidia,22VZU@171551|Porphyromonadaceae 976|Bacteroidetes L exodeoxyribonuclease III xth - 3.1.11.2 ko:K01142 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Exo_endo_phos PHJFGMMN_02958 411477.PARMER_00437 1.91e-233 642.0 COG0042@1|root,COG0042@2|Bacteria,4NFRH@976|Bacteroidetes,2FMTW@200643|Bacteroidia,22X5R@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines dus - - - - - - - - - - - Dus PHJFGMMN_02959 411477.PARMER_00438 8.42e-163 455.0 COG0321@1|root,COG0321@2|Bacteria,4NE14@976|Bacteroidetes,2FMSJ@200643|Bacteroidia,22XNX@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate lipB - 2.3.1.181 ko:K03801 ko00785,ko01100,map00785,map01100 - R07766,R07769 RC00039,RC00992,RC02867 ko00000,ko00001,ko01000 - - - BPL_LplA_LipB PHJFGMMN_02960 411477.PARMER_00439 4.82e-187 520.0 COG0744@1|root,COG0744@2|Bacteria,4NF90@976|Bacteroidetes,2FN8I@200643|Bacteroidia,22WS1@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors mtgA - 2.4.1.129 ko:K03814 ko00550,map00550 - - - ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 - Transgly PHJFGMMN_02961 411477.PARMER_00440 0.0 1005.0 COG0477@1|root,COG0477@2|Bacteria,4PKTJ@976|Bacteroidetes,2FNZ0@200643|Bacteroidia,22W9K@171551|Porphyromonadaceae 976|Bacteroidetes EGP Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family - - - ko:K08138 - - - - ko00000,ko02000 2.A.1.1.3 - - Sugar_tr PHJFGMMN_02962 411477.PARMER_00441 0.0 913.0 COG2115@1|root,COG2115@2|Bacteria,4NEBQ@976|Bacteroidetes,2FN9P@200643|Bacteroidia,22WI3@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase xylA GO:0003674,GO:0003824,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009045,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019323,GO:0042732,GO:0042843,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 5.3.1.5 ko:K01805 ko00040,ko00051,ko01100,map00040,map00051,map01100 - R00878,R01432 RC00376,RC00516 ko00000,ko00001,ko01000 - - - - PHJFGMMN_02963 999419.HMPREF1077_03594 0.0 974.0 COG1070@1|root,COG1070@2|Bacteria,4NFBZ@976|Bacteroidetes,2FPIS@200643|Bacteroidia,22WNJ@171551|Porphyromonadaceae 976|Bacteroidetes G FGGY family of carbohydrate kinases, N-terminal domain xylB_2 - 2.7.1.17 ko:K00854 ko00040,ko01100,map00040,map01100 M00014 R01639 RC00002,RC00538 ko00000,ko00001,ko00002,ko01000 - - - FGGY_C,FGGY_N PHJFGMMN_02964 411477.PARMER_00443 1.86e-171 478.0 COG1051@1|root,COG1051@2|Bacteria,4NIBP@976|Bacteroidetes,2FNT4@200643|Bacteroidia,22XT1@171551|Porphyromonadaceae 976|Bacteroidetes F NUDIX domain - - - - - - - - - - - - NUDIX PHJFGMMN_02965 411477.PARMER_00444 0.0 1138.0 COG0168@1|root,COG0168@2|Bacteria,4NF7R@976|Bacteroidetes,2FPRA@200643|Bacteroidia,22WUJ@171551|Porphyromonadaceae 976|Bacteroidetes P COG0168 Trk-type K transport systems, membrane components ktrB - - ko:K03498 - - - - ko00000,ko02000 2.A.38.1,2.A.38.4 - - TrkH PHJFGMMN_02966 411477.PARMER_00445 4.3e-159 446.0 COG0569@1|root,COG0569@2|Bacteria,4NGRQ@976|Bacteroidetes,2FMQT@200643|Bacteroidia,22YIR@171551|Porphyromonadaceae 976|Bacteroidetes P COG0569 K transport systems NAD-binding component ktrA - - ko:K03499 - - - - ko00000,ko02000 2.A.38.1,2.A.38.4 - - TrkA_C,TrkA_N PHJFGMMN_02967 411477.PARMER_00446 1.39e-295 808.0 COG1253@1|root,COG1253@2|Bacteria,4NE9R@976|Bacteroidetes,2FN9R@200643|Bacteroidia,22W70@171551|Porphyromonadaceae 976|Bacteroidetes P Transporter associated domain corC_1 - - ko:K03699 - - - - ko00000,ko02042 - - - CBS,CorC_HlyC,DUF21 PHJFGMMN_02968 411477.PARMER_00447 2.92e-57 178.0 2A1BY@1|root,30PIV@2|Bacteria,4PHRF@976|Bacteroidetes,2FTNE@200643|Bacteroidia,231F5@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02969 411477.PARMER_00448 2.58e-102 295.0 COG0537@1|root,COG0537@2|Bacteria,4NNS7@976|Bacteroidetes,2FPNF@200643|Bacteroidia,230A6@171551|Porphyromonadaceae 976|Bacteroidetes FG HIT domain - - - - - - - - - - - - HIT PHJFGMMN_02970 411477.PARMER_00449 3.55e-230 633.0 COG1082@1|root,COG1082@2|Bacteria,4NJF7@976|Bacteroidetes,2G2TH@200643|Bacteroidia,231JP@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2 PHJFGMMN_02971 411477.PARMER_00450 6.11e-158 443.0 COG1136@1|root,COG1136@2|Bacteria,4NFDW@976|Bacteroidetes,2FMDA@200643|Bacteroidia,22W90@171551|Porphyromonadaceae 976|Bacteroidetes V bacteriocin export ABC transporter, lactococcin 972 group - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran PHJFGMMN_02972 411477.PARMER_00451 0.0 1559.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN9Q@200643|Bacteroidia,22WY9@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD PHJFGMMN_02973 411477.PARMER_00453 4.17e-116 331.0 COG3023@1|root,COG3023@2|Bacteria,4NQ2J@976|Bacteroidetes,2FS4K@200643|Bacteroidia,230ES@171551|Porphyromonadaceae 976|Bacteroidetes V Ami_2 - - 3.5.1.28 ko:K01447 - - R04112 RC00064,RC00141 ko00000,ko01000 - - - Amidase_2 PHJFGMMN_02974 411479.BACUNI_02978 4.39e-06 44.7 2BTR7@1|root,32NYF@2|Bacteria,4PA00@976|Bacteroidetes,2FVW3@200643|Bacteroidia,4ASKK@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02975 411477.PARMER_00455 6.45e-111 319.0 COG0776@1|root,COG0776@2|Bacteria,4NUQD@976|Bacteroidetes,2FQEV@200643|Bacteroidia,231EM@171551|Porphyromonadaceae 976|Bacteroidetes L Bacterial DNA-binding protein - - - - - - - - - - - - Bac_DNA_binding,HU-DNA_bdg PHJFGMMN_02976 411477.PARMER_00456 6.32e-42 137.0 298PA@1|root,2ZW23@2|Bacteria,4P8MY@976|Bacteroidetes,2FUSW@200643|Bacteroidia,2317T@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4248) - - - - - - - - - - - - DUF4248 PHJFGMMN_02977 411477.PARMER_00459 0.0 1395.0 COG5545@1|root,COG5545@2|Bacteria,4NG2W@976|Bacteroidetes,2FMQ7@200643|Bacteroidia,22Z8B@171551|Porphyromonadaceae 976|Bacteroidetes S Virulence-associated protein E - - - - - - - - - - - - VirE,VirE_N PHJFGMMN_02979 411477.PARMER_00461 0.0 1580.0 COG4953@1|root,COG4953@2|Bacteria,4NEG5@976|Bacteroidetes,2FNUH@200643|Bacteroidia,22W9J@171551|Porphyromonadaceae 976|Bacteroidetes M Penicillin-Binding Protein C-terminus Family pbpC - 2.4.1.129 ko:K05367 ko00550,map00550 - - - ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 - BiPBP_C,Transgly,Transpeptidase PHJFGMMN_02980 411477.PARMER_00462 4.54e-32 113.0 COG1143@1|root,COG1143@2|Bacteria,4PKDY@976|Bacteroidetes,2G3DT@200643|Bacteroidia,22YE7@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S dicluster domain - - 1.2.7.3 ko:K00176 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 M00009,M00011,M00173,M00620 R01197 RC00004,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - Fer4 PHJFGMMN_02981 411477.PARMER_00463 2.6e-258 708.0 COG0674@1|root,COG0674@2|Bacteria,4NGYK@976|Bacteroidetes,2FM6R@200643|Bacteroidia,22WCE@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA vorB - 1.2.7.11,1.2.7.3 ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - PFOR_II,POR_N PHJFGMMN_02982 411477.PARMER_00464 2.39e-34 117.0 292TZ@1|root,2ZQBM@2|Bacteria,4P6XJ@976|Bacteroidetes,2G1T8@200643|Bacteroidia,2319G@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_02983 411477.PARMER_00465 1.4e-186 518.0 COG1013@1|root,COG1013@2|Bacteria,4NDWF@976|Bacteroidetes,2FP3C@200643|Bacteroidia,22VXD@171551|Porphyromonadaceae 976|Bacteroidetes C Oxidoreductase vorA - 1.2.7.11,1.2.7.3 ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C PHJFGMMN_02984 411477.PARMER_00466 2.12e-126 360.0 COG1014@1|root,COG1014@2|Bacteria,4NGWJ@976|Bacteroidetes,2FNG6@200643|Bacteroidia,22X34@171551|Porphyromonadaceae 976|Bacteroidetes C 2-oxoglutarate ferredoxin oxidoreductase subunit gamma porG - 1.2.7.3 ko:K00177 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 M00009,M00011,M00173,M00620 R01197 RC00004,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - POR PHJFGMMN_02985 411477.PARMER_00467 0.0 1422.0 COG4206@1|root,COG4206@2|Bacteria,4NI2R@976|Bacteroidetes,2FNYT@200643|Bacteroidia,22W3I@171551|Porphyromonadaceae 976|Bacteroidetes H Putative porin - - - - - - - - - - - - Porin_10 PHJFGMMN_02986 411477.PARMER_00468 2.4e-193 536.0 COG4623@1|root,COG4623@2|Bacteria,4PKED@976|Bacteroidetes,2G3EB@200643|Bacteroidia,22WXG@171551|Porphyromonadaceae 976|Bacteroidetes M Bacterial extracellular solute-binding proteins, family 3 - - - - - - - - - - - - SBP_bac_3 PHJFGMMN_02987 411477.PARMER_00469 0.0 1026.0 COG0642@1|root,COG2205@2|Bacteria,4NKBC@976|Bacteroidetes,2FNE0@200643|Bacteroidia,22WMG@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c,HisKA,PAS_3,PAS_4 PHJFGMMN_02988 411477.PARMER_00470 2.47e-290 795.0 COG0513@1|root,COG0513@2|Bacteria,4NEVI@976|Bacteroidetes,2FM7Y@200643|Bacteroidia,22WEV@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the DEAD box helicase family - - - - - - - - - - - - DEAD,Helicase_C PHJFGMMN_02989 411477.PARMER_00471 0.0 1112.0 COG1158@1|root,COG1158@2|Bacteria,4NEFP@976|Bacteroidetes,2FN7R@200643|Bacteroidia,22X21@171551|Porphyromonadaceae 976|Bacteroidetes K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template rho - - ko:K03628 ko03018,map03018 - - - ko00000,ko00001,ko03019,ko03021 - - - ATP-synt_ab,Rho_N,Rho_RNA_bind PHJFGMMN_02990 411477.PARMER_00472 0.0 886.0 COG0037@1|root,COG0037@2|Bacteria,4NEJS@976|Bacteroidetes,2FP2A@200643|Bacteroidia,22X8C@171551|Porphyromonadaceae 976|Bacteroidetes D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine tilS - 6.3.4.19 ko:K04075 - - R09597 RC02633,RC02634 ko00000,ko01000,ko03016 - - - ATP_bind_3,TilS_C PHJFGMMN_02991 411477.PARMER_00473 6.07e-133 382.0 COG1579@1|root,COG1579@2|Bacteria,4NE36@976|Bacteroidetes,2FPGP@200643|Bacteroidia,22W5K@171551|Porphyromonadaceae 976|Bacteroidetes S Zinc ribbon domain protein - - - ko:K07164 - - - - ko00000 - - - zf-RING_7 PHJFGMMN_02992 411477.PARMER_00474 9.58e-268 732.0 COG0327@1|root,COG0327@2|Bacteria,4NF51@976|Bacteroidetes,2FMW2@200643|Bacteroidia,22WCX@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the GTP cyclohydrolase I type 2 NIF3 family yqfO - - - - - - - - - - - NIF3 PHJFGMMN_02993 411477.PARMER_00475 0.0 1179.0 COG0173@1|root,COG0173@2|Bacteria,4NECY@976|Bacteroidetes,2FMCA@200643|Bacteroidia,22W5B@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) aspS - 6.1.1.12 ko:K01876 ko00970,map00970 M00359,M00360 R05577 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - GAD,tRNA-synt_2,tRNA_anti-codon PHJFGMMN_02994 411477.PARMER_00477 0.0 1555.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMQP@200643|Bacteroidia,22W3X@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 PHJFGMMN_02995 411477.PARMER_00478 0.0 1496.0 COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FNFR@200643|Bacteroidia,22XGQ@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - CHB_HEX_C_1,F5_F8_type_C,Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b PHJFGMMN_02996 1235803.C825_04464 1.53e-74 223.0 COG0292@1|root,COG0292@2|Bacteria,4NNKU@976|Bacteroidetes,2FSHF@200643|Bacteroidia,22XVI@171551|Porphyromonadaceae 976|Bacteroidetes J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit rplT GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - ko:K02887 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L20 PHJFGMMN_02997 411477.PARMER_00482 1.05e-36 124.0 COG0291@1|root,COG0291@2|Bacteria,4NUVR@976|Bacteroidetes,2FUKE@200643|Bacteroidia,22YNZ@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bL35 family rpmI GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02916 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L35p PHJFGMMN_02998 411477.PARMER_00483 6.62e-133 378.0 COG0290@1|root,COG0290@2|Bacteria,4NIZ5@976|Bacteroidetes,2FNF1@200643|Bacteroidia,22X5B@171551|Porphyromonadaceae 976|Bacteroidetes J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins infC GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - ko:K02520 - - - - ko00000,ko03012,ko03029 - - - IF3_C,IF3_N PHJFGMMN_02999 411477.PARMER_00484 0.0 1312.0 COG0441@1|root,COG0441@2|Bacteria,4NEFT@976|Bacteroidetes,2FMAU@200643|Bacteroidia,22VXM@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) thrS GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 ko:K01868 ko00970,map00970 M00359,M00360 R03663 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - HGTP_anticodon,TGS,tRNA-synt_2b,tRNA_SAD PHJFGMMN_03001 411477.PARMER_00486 5.94e-168 468.0 COG0681@1|root,COG0681@2|Bacteria,4NRG2@976|Bacteroidetes,2FTDJ@200643|Bacteroidia,22Y5E@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the peptidase S26 family - - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24,Peptidase_S26 PHJFGMMN_03003 411477.PARMER_00488 1.12e-144 407.0 28STC@1|root,2ZF35@2|Bacteria,4P8W5@976|Bacteroidetes,2FZ6N@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03004 411477.PARMER_00489 3.58e-282 772.0 COG3391@1|root,COG3391@2|Bacteria,4NVSJ@976|Bacteroidetes,2FVH9@200643|Bacteroidia,230RV@171551|Porphyromonadaceae 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 PHJFGMMN_03005 411477.PARMER_00492 1.82e-65 199.0 COG2274@1|root,COG2274@2|Bacteria,4NE19@976|Bacteroidetes,2FNRE@200643|Bacteroidia,22X33@171551|Porphyromonadaceae 976|Bacteroidetes V hmm pf03412 - - - ko:K06147 - - - - ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 - - ABC_membrane,ABC_tran,Peptidase_C39 PHJFGMMN_03006 411477.PARMER_00495 1.99e-71 214.0 2F7EQ@1|root,33ZVJ@2|Bacteria,4P4RZ@976|Bacteroidetes,2FY6S@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03007 411477.PARMER_00496 6.32e-84 248.0 COG3436@1|root,COG3436@2|Bacteria,4NV0F@976|Bacteroidetes,2FSTJ@200643|Bacteroidia 976|Bacteroidetes L PFAM IS66 Orf2 like protein - - - ko:K07484 - - - - ko00000 - - - TnpB_IS66 PHJFGMMN_03009 411477.PARMER_00498 7.42e-106 304.0 COG3774@1|root,COG3774@2|Bacteria,4NT2T@976|Bacteroidetes,2FV3Q@200643|Bacteroidia 976|Bacteroidetes M Glycosyltransferase sugar-binding region containing DXD motif - - - - - - - - - - - - Gly_transf_sug PHJFGMMN_03011 411477.PARMER_00299 4.01e-29 108.0 COG0457@1|root,COG0457@2|Bacteria,4PHIR@976|Bacteroidetes,2FRSJ@200643|Bacteroidia 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - - PHJFGMMN_03013 411477.PARMER_00503 1.47e-287 811.0 COG0457@1|root,COG0457@2|Bacteria,4NGGZ@976|Bacteroidetes,2FMHN@200643|Bacteroidia,22WD9@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_1,TPR_11,TPR_16,TPR_2,TPR_6,TPR_8,TPR_9 PHJFGMMN_03014 411477.PARMER_00504 5.41e-73 219.0 COG4770@1|root,COG4770@2|Bacteria,4NWQ0@976|Bacteroidetes,2FUXX@200643|Bacteroidia,22YSD@171551|Porphyromonadaceae 976|Bacteroidetes I Biotin-requiring enzyme - - - - - - - - - - - - Biotin_lipoyl PHJFGMMN_03015 411477.PARMER_00505 0.0 1016.0 COG4799@1|root,COG4799@2|Bacteria,4NEMJ@976|Bacteroidetes,2FPY6@200643|Bacteroidia,22X9X@171551|Porphyromonadaceae 976|Bacteroidetes I COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - - - - - - - - - - Carboxyl_trans PHJFGMMN_03016 411477.PARMER_00506 9.69e-128 363.0 COG0242@1|root,COG0242@2|Bacteria,4NFB4@976|Bacteroidetes,2FNEJ@200643|Bacteroidia,22XVR@171551|Porphyromonadaceae 976|Bacteroidetes J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions def - 3.5.1.88 ko:K01462 - - - - ko00000,ko01000 - - - Pep_deformylase PHJFGMMN_03017 999419.HMPREF1077_03631 1.13e-98 286.0 COG0816@1|root,COG0816@2|Bacteria,4NQ8B@976|Bacteroidetes,2FT2Q@200643|Bacteroidia,22Y74@171551|Porphyromonadaceae 976|Bacteroidetes L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA ruvX GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - ko:K07447 - - - - ko00000,ko01000 - - - RuvX PHJFGMMN_03018 411477.PARMER_00508 0.0 909.0 COG1086@1|root,COG2148@1|root,COG1086@2|Bacteria,COG2148@2|Bacteria,4NER4@976|Bacteroidetes,2FNC2@200643|Bacteroidia,22VY7@171551|Porphyromonadaceae 976|Bacteroidetes M CoA-binding domain wcaJ_2 - 2.7.8.6 ko:K00996,ko:K03606 ko05111,map05111 - - - ko00000,ko00001,ko01000,ko01005 - - - Bac_transf,CoA_binding_3 PHJFGMMN_03019 411477.PARMER_00509 2.8e-281 768.0 COG2885@1|root,COG2885@2|Bacteria,4NKQC@976|Bacteroidetes,2FRBK@200643|Bacteroidia,22X13@171551|Porphyromonadaceae 976|Bacteroidetes M membrane - GO:0001871,GO:0003674,GO:0005215,GO:0005488,GO:0005575,GO:0006810,GO:0008150,GO:0015267,GO:0015288,GO:0016020,GO:0019867,GO:0022803,GO:0022829,GO:0022857,GO:0030246,GO:0030247,GO:0051179,GO:0051234,GO:0055085 - - - - - - - - - - OmpA PHJFGMMN_03020 411477.PARMER_00510 4.32e-280 765.0 COG1089@1|root,COG1089@2|Bacteria,4NEB6@976|Bacteroidetes,2FMUP@200643|Bacteroidia,22X5T@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose gmd - 4.2.1.47 ko:K01711 ko00051,ko00520,ko01100,map00051,map00520,map01100 - R00888 RC00402 ko00000,ko00001,ko01000 - - - GDP_Man_Dehyd PHJFGMMN_03021 411477.PARMER_00511 1.85e-265 726.0 COG0451@1|root,COG0451@2|Bacteria,4NDV4@976|Bacteroidetes,2FNA5@200643|Bacteroidia,22W0D@171551|Porphyromonadaceae 976|Bacteroidetes GM Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction fcl - 1.1.1.271 ko:K02377 ko00051,ko00520,ko01100,map00051,map00520,map01100 - R05692 RC01014 ko00000,ko00001,ko01000 - - - Epimerase PHJFGMMN_03022 411477.PARMER_00512 7.89e-213 587.0 COG1209@1|root,COG1209@2|Bacteria,4NE1U@976|Bacteroidetes,2FNUA@200643|Bacteroidia,22WZT@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis rfbA - 2.7.7.24 ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 M00793 R02328 RC00002 ko00000,ko00001,ko00002,ko01000 - - - NTP_transferase PHJFGMMN_03024 411477.PARMER_00514 6e-130 369.0 COG3247@1|root,COG3247@2|Bacteria,4NQZ1@976|Bacteroidetes,2FMHV@200643|Bacteroidia,22YJF@171551|Porphyromonadaceae 976|Bacteroidetes S Short repeat of unknown function (DUF308) - - - - - - - - - - - - DUF308 PHJFGMMN_03025 411477.PARMER_00515 4.96e-248 680.0 2EU8H@1|root,33MQX@2|Bacteria,4NY8F@976|Bacteroidetes,2FQF7@200643|Bacteroidia,2315B@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4249) - - - - - - - - - - - - DUF4249 PHJFGMMN_03026 411477.PARMER_00516 0.0 1822.0 COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,2FM7I@200643|Bacteroidia,22XCB@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor plug domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_03027 411477.PARMER_00517 7.84e-208 575.0 COG3712@1|root,COG3712@2|Bacteria,4P1PI@976|Bacteroidetes,2FR0V@200643|Bacteroidia 976|Bacteroidetes PT Fe2 -dicitrate sensor, membrane component - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_03028 411477.PARMER_00518 1.74e-293 800.0 COG0133@1|root,COG0133@2|Bacteria,4NDWP@976|Bacteroidetes,2FP09@200643|Bacteroidia,22VZ0@171551|Porphyromonadaceae 976|Bacteroidetes E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine trpB GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20,5.3.1.24 ko:K01696,ko:K01817 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722,R03509 RC00209,RC00210,RC00700,RC00701,RC00945,RC02868 ko00000,ko00001,ko00002,ko01000 - - - PALP PHJFGMMN_03029 411477.PARMER_00519 0.0 938.0 COG0147@1|root,COG0147@2|Bacteria,4NFQ5@976|Bacteroidetes,2FN6I@200643|Bacteroidia,22XAQ@171551|Porphyromonadaceae 976|Bacteroidetes EH Anthranilate synthase component I, N terminal region trpE - 4.1.3.27 ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986 RC00010,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - Anth_synt_I_N,Chorismate_bind PHJFGMMN_03030 411477.PARMER_00520 9.31e-137 386.0 COG0512@1|root,COG0512@2|Bacteria,4NE4I@976|Bacteroidetes,2FM5F@200643|Bacteroidia,22XQD@171551|Porphyromonadaceae 976|Bacteroidetes EH Glutamine amidotransferase class-I trpG - 2.6.1.85,4.1.3.27 ko:K01658,ko:K01664 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986,R01716 RC00010,RC01418,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - GATase PHJFGMMN_03031 411477.PARMER_00521 2.15e-237 653.0 COG0547@1|root,COG0547@2|Bacteria,4NH2J@976|Bacteroidetes,2FPE1@200643|Bacteroidia,22W61@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) trpD GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R00985,R00986,R01073 RC00010,RC00440,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - Glycos_trans_3N,Glycos_transf_3 PHJFGMMN_03032 411477.PARMER_00522 8.82e-186 517.0 COG0134@1|root,COG0134@2|Bacteria,4NFJT@976|Bacteroidetes,2FN9T@200643|Bacteroidia,22WM1@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the TrpC family trpC GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 ko:K01609 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R03508 RC00944 ko00000,ko00001,ko00002,ko01000 - - - IGPS PHJFGMMN_03033 411477.PARMER_00523 2.33e-164 459.0 COG0135@1|root,COG0135@2|Bacteria,4NNQ1@976|Bacteroidetes,2FPJD@200643|Bacteroidia,22Y2M@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the TrpF family trpF - 5.3.1.24 ko:K01817 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R03509 RC00945 ko00000,ko00001,ko00002,ko01000 - - - PRAI PHJFGMMN_03034 411477.PARMER_00524 2.13e-182 507.0 COG0159@1|root,COG0159@2|Bacteria,4NE21@976|Bacteroidetes,2FPFP@200643|Bacteroidia,22W9T@171551|Porphyromonadaceae 976|Bacteroidetes E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate trpA - 4.2.1.20 ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 - - - Trp_syntA PHJFGMMN_03035 657309.BXY_33870 5.98e-286 781.0 COG3328@1|root,COG3328@2|Bacteria,4NFQS@976|Bacteroidetes,2FM5A@200643|Bacteroidia,4AMKB@815|Bacteroidaceae 976|Bacteroidetes L COG3328 Transposase and inactivated derivatives - - - - - - - - - - - - Transposase_mut PHJFGMMN_03036 411477.PARMER_01038 1.51e-303 825.0 COG1748@1|root,COG1748@2|Bacteria,4NE0Y@976|Bacteroidetes,2FMKT@200643|Bacteroidia,22WCZ@171551|Porphyromonadaceae 976|Bacteroidetes E Saccharopine dehydrogenase LYS1 - 1.5.1.7 ko:K00290 ko00300,ko00310,ko01100,ko01110,ko01130,ko01230,map00300,map00310,map01100,map01110,map01130,map01230 M00030,M00032 R00715 RC00217,RC01532 ko00000,ko00001,ko00002,ko01000 - - - Sacchrp_dh_C,Sacchrp_dh_NADP PHJFGMMN_03037 411477.PARMER_01037 3.78e-249 683.0 COG2896@1|root,COG2896@2|Bacteria 2|Bacteria H Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate - - - - - - - - - - - - Radical_SAM PHJFGMMN_03038 411477.PARMER_01036 2.52e-107 309.0 COG1225@1|root,COG1225@2|Bacteria,4NNGK@976|Bacteroidetes,2FNTB@200643|Bacteroidia,22Y01@171551|Porphyromonadaceae 976|Bacteroidetes O Thiol peroxidase bcp - 1.11.1.15 ko:K03564 - - - - ko00000,ko01000 - - - AhpC-TSA PHJFGMMN_03039 411477.PARMER_01035 9.97e-245 672.0 COG0468@1|root,COG0468@2|Bacteria,4NEXT@976|Bacteroidetes,2FN5D@200643|Bacteroidia,22WEY@171551|Porphyromonadaceae 976|Bacteroidetes L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage recA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - ko:K03553 ko03440,map03440 M00729 - - ko00000,ko00001,ko00002,ko03400 - - - RecA PHJFGMMN_03040 411477.PARMER_01034 2.17e-243 667.0 COG2348@1|root,COG2348@2|Bacteria,4NQ1R@976|Bacteroidetes,2FTKE@200643|Bacteroidia,22Y8E@171551|Porphyromonadaceae 976|Bacteroidetes V Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_6 PHJFGMMN_03041 411477.PARMER_01033 1.02e-149 421.0 COG2120@1|root,COG2120@2|Bacteria,4NN16@976|Bacteroidetes,2FW3I@200643|Bacteroidia,22Z1Z@171551|Porphyromonadaceae 976|Bacteroidetes S GlcNAc-PI de-N-acetylase - - - - - - - - - - - - PIG-L PHJFGMMN_03042 411477.PARMER_01032 0.0 899.0 COG0726@1|root,COG0726@2|Bacteria,4NF79@976|Bacteroidetes,2FR2H@200643|Bacteroidia,22X5H@171551|Porphyromonadaceae 976|Bacteroidetes G polysaccharide deacetylase - - - - - - - - - - - - - PHJFGMMN_03043 411477.PARMER_01031 1.21e-308 840.0 COG0438@1|root,COG0438@2|Bacteria,4PKGJ@976|Bacteroidetes,2FRNG@200643|Bacteroidia,22XF2@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase Family 4 - - - - - - - - - - - - Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4 PHJFGMMN_03044 411477.PARMER_01030 6.96e-288 784.0 COG0438@1|root,COG0438@2|Bacteria,4NFMB@976|Bacteroidetes,2FMJE@200643|Bacteroidia,22XBH@171551|Porphyromonadaceae 976|Bacteroidetes M transferase activity, transferring glycosyl groups - - - - - - - - - - - - Glyco_trans_1_4 PHJFGMMN_03045 411477.PARMER_01029 1.93e-242 665.0 COG2264@1|root,COG2264@2|Bacteria 2|Bacteria J protein methyltransferase activity prmA - 2.1.1.222,2.1.1.64 ko:K00568,ko:K02687 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R04988,R05614,R08769,R08781 RC00003,RC00392,RC01895 ko00000,ko00001,ko00002,ko01000,ko03009 - - - Methyltransf_12,Methyltransf_21,Methyltransf_23,Methyltransf_25,Methyltransf_31,PrmA PHJFGMMN_03046 411477.PARMER_01028 1.11e-84 249.0 COG0801@1|root,COG0801@2|Bacteria,4NWDI@976|Bacteroidetes,2FUPY@200643|Bacteroidia 976|Bacteroidetes H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase folK2 - 2.7.6.3 ko:K00950 ko00790,ko01100,map00790,map01100 M00126,M00841 R03503 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - C_GCAxxG_C_C,HPPK PHJFGMMN_03047 411477.PARMER_01027 0.0 1625.0 COG0370@1|root,COG0370@2|Bacteria,4NEII@976|Bacteroidetes,2FNKT@200643|Bacteroidia,22VWF@171551|Porphyromonadaceae 976|Bacteroidetes P transporter of a GTP-driven Fe(2 ) uptake system feoB - - ko:K04759 - - - - ko00000,ko02000 9.A.8.1 - - FeoA,FeoB_C,FeoB_N,Gate PHJFGMMN_03049 411477.PARMER_01025 7.05e-248 679.0 COG1477@1|root,COG1477@2|Bacteria,4NGEK@976|Bacteroidetes,2FKZQ@200643|Bacteroidia,22W78@171551|Porphyromonadaceae 976|Bacteroidetes H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein apbE - 2.7.1.180 ko:K03734 - - - - ko00000,ko01000 - - - ApbE PHJFGMMN_03051 411477.PARMER_01023 0.0 1647.0 COG1501@1|root,COG1501@2|Bacteria,4NE1H@976|Bacteroidetes,2FQU9@200643|Bacteroidia,22W8U@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF5110) - - 3.2.1.177,3.2.1.20 ko:K01187,ko:K01811 ko00052,ko00500,ko01100,map00052,map00500,map01100 - R00028,R00801,R00802,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 - GH31 - DUF4968,DUF5110,Gal_mutarotas_2,Glyco_hydro_31 PHJFGMMN_03052 411477.PARMER_01022 1.36e-137 389.0 COG0424@1|root,COG0424@2|Bacteria,4NNXV@976|Bacteroidetes,2FKYZ@200643|Bacteroidia,22XPA@171551|Porphyromonadaceae 976|Bacteroidetes D Maf-like protein maf - - ko:K06287 - - - - ko00000 - - - Maf PHJFGMMN_03053 411477.PARMER_01021 3.58e-124 353.0 COG1778@1|root,COG1778@2|Bacteria,4NMHD@976|Bacteroidetes,2FTGQ@200643|Bacteroidia,22XSR@171551|Porphyromonadaceae 976|Bacteroidetes S 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase kdsC - 3.1.3.45 ko:K03270 ko00540,ko01100,map00540,map01100 M00063 R03350 RC00017 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Hydrolase_3 PHJFGMMN_03054 411477.PARMER_01020 2.92e-184 512.0 COG5495@1|root,COG5495@2|Bacteria,4NI4M@976|Bacteroidetes,2FMCQ@200643|Bacteroidia,22WAJ@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF2520) - - - - - - - - - - - - DUF2520,F420_oxidored,Rossmann-like PHJFGMMN_03055 411477.PARMER_01019 1.32e-130 370.0 COG0778@1|root,COG0778@2|Bacteria,4NMXW@976|Bacteroidetes,2FKZR@200643|Bacteroidia,22Y0W@171551|Porphyromonadaceae 976|Bacteroidetes C nitroreductase - - - - - - - - - - - - Nitroreductase PHJFGMMN_03056 411477.PARMER_01017 0.0 883.0 COG1538@1|root,COG1538@2|Bacteria,4NDZK@976|Bacteroidetes,2FP6I@200643|Bacteroidia,22WSV@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - ko:K18139,ko:K18300 ko01501,ko02024,map01501,map02024 M00641,M00642,M00643,M00647,M00718,M00768,M00822 - - ko00000,ko00001,ko00002,ko01504,ko02000 1.B.17,2.A.6.2 - - OEP PHJFGMMN_03057 411477.PARMER_01016 0.0 1909.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FNAJ@200643|Bacteroidia,22W8A@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran,OEP PHJFGMMN_03058 411477.PARMER_01015 2.01e-267 733.0 COG0845@1|root,COG0845@2|Bacteria,4NIDC@976|Bacteroidetes,2FM7T@200643|Bacteroidia,22WI4@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - HlyD_D23 PHJFGMMN_03059 616991.JPOO01000003_gene1097 1.01e-34 122.0 2EBGV@1|root,335HF@2|Bacteria,4NV5E@976|Bacteroidetes,1I6Q2@117743|Flavobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03063 411477.PARMER_03206 0.0 916.0 COG1082@1|root,COG2133@1|root,COG1082@2|Bacteria,COG2133@2|Bacteria,4NFKF@976|Bacteroidetes,2FRR2@200643|Bacteroidia,22XIX@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 PHJFGMMN_03064 411477.PARMER_03207 8.85e-76 227.0 2EGII@1|root,33AAP@2|Bacteria,4NXMZ@976|Bacteroidetes,2FVPI@200643|Bacteroidia,2314H@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - DUF4890 PHJFGMMN_03065 999419.HMPREF1077_00583 0.0 1585.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_03066 411477.PARMER_00830 0.0 1316.0 COG1395@1|root,COG1395@2|Bacteria,4NHQT@976|Bacteroidetes,2FM5M@200643|Bacteroidia,22Z38@171551|Porphyromonadaceae 976|Bacteroidetes K Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_03067 411477.PARMER_00832 4.45e-108 310.0 COG3023@1|root,COG3023@2|Bacteria,4NQ2J@976|Bacteroidetes,2FSAJ@200643|Bacteroidia,230FK@171551|Porphyromonadaceae 976|Bacteroidetes V N-acetylmuramoyl-L-alanine amidase - - 3.5.1.28 ko:K01447 - - R04112 RC00064,RC00141 ko00000,ko01000 - - - Amidase_2 PHJFGMMN_03068 411479.BACUNI_02978 4.92e-05 42.0 2BTR7@1|root,32NYF@2|Bacteria,4PA00@976|Bacteroidetes,2FVW3@200643|Bacteroidia,4ASKK@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03069 411477.PARMER_00834 3.46e-104 301.0 COG0776@1|root,COG0776@2|Bacteria,4P3B0@976|Bacteroidetes,2FQZF@200643|Bacteroidia 976|Bacteroidetes L regulation of translation - - - - - - - - - - - - - PHJFGMMN_03070 411477.PARMER_00836 3.2e-49 156.0 298PA@1|root,342KM@2|Bacteria,4P4HN@976|Bacteroidetes,2FU6Y@200643|Bacteroidia,2316R@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4248) - - - - - - - - - - - - DUF4248 PHJFGMMN_03071 411477.PARMER_00838 0.0 1447.0 COG5545@1|root,COG5545@2|Bacteria,4NG2W@976|Bacteroidetes,2FMQ7@200643|Bacteroidia,22Z8B@171551|Porphyromonadaceae 976|Bacteroidetes S Virulence-associated protein E - - - - - - - - - - - - VirE,VirE_N PHJFGMMN_03073 411477.PARMER_00841 0.0 942.0 COG0673@1|root,COG0673@2|Bacteria,4NG5T@976|Bacteroidetes,2FPA2@200643|Bacteroidia,22X70@171551|Porphyromonadaceae 976|Bacteroidetes S Putative oxidoreductase C terminal domain - - - - - - - - - - - - GFO_IDH_MocA,Oxidoreduct_C PHJFGMMN_03074 411477.PARMER_00842 0.0 1034.0 COG3119@1|root,COG3119@2|Bacteria,4NFGI@976|Bacteroidetes,2FMUC@200643|Bacteroidia 976|Bacteroidetes P COG COG3119 Arylsulfatase A and related enzymes - - - - - - - - - - - - DUF4976,Sulfatase PHJFGMMN_03075 411477.PARMER_00843 0.0 1231.0 COG1395@1|root,COG1395@2|Bacteria,4NHQT@976|Bacteroidetes,2FM5M@200643|Bacteroidia,22Z38@171551|Porphyromonadaceae 976|Bacteroidetes K Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_03076 411477.PARMER_00844 0.0 2023.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22ZBI@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_03077 411477.PARMER_00844 8e-67 226.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22ZBI@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_03078 411477.PARMER_00845 2.94e-204 566.0 COG3712@1|root,COG3712@2|Bacteria,4P27U@976|Bacteroidetes,2FX6Q@200643|Bacteroidia 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_03080 411477.PARMER_00848 1.48e-128 365.0 COG1595@1|root,COG1595@2|Bacteria,4NR0P@976|Bacteroidetes,2FSSB@200643|Bacteroidia 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_03081 411477.PARMER_00849 3.52e-254 696.0 COG3021@1|root,COG3021@2|Bacteria,4NHB3@976|Bacteroidetes,2FMQG@200643|Bacteroidia,22ZBB@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos PHJFGMMN_03082 411477.PARMER_00850 0.0 1016.0 COG1530@1|root,COG1530@2|Bacteria,4NED1@976|Bacteroidetes,2FMXV@200643|Bacteroidia,22WM6@171551|Porphyromonadaceae 976|Bacteroidetes J ribonuclease G rng - - ko:K08301 - - - - ko00000,ko01000,ko03009,ko03019 - - - RNase_E_G,S1 PHJFGMMN_03083 1235803.C825_00691 8.94e-56 174.0 COG0776@1|root,COG0776@2|Bacteria,4NT0D@976|Bacteroidetes,2FTUV@200643|Bacteroidia,22YCW@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the bacterial histone-like protein family hupA - - ko:K03530 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding PHJFGMMN_03084 411477.PARMER_00852 2.96e-307 836.0 COG1194@1|root,COG1194@2|Bacteria,4NDZY@976|Bacteroidetes,2FNMQ@200643|Bacteroidia,22WUP@171551|Porphyromonadaceae 976|Bacteroidetes L A G-specific adenine glycosylase mutY - - ko:K03575 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - EndIII_4Fe-2S,HhH-GPD,NUDIX_4 PHJFGMMN_03085 411477.PARMER_00853 2.96e-111 320.0 COG0629@1|root,COG0629@2|Bacteria,4NQBK@976|Bacteroidetes,2FT5G@200643|Bacteroidia,22Y9U@171551|Porphyromonadaceae 976|Bacteroidetes L Single-stranded DNA-binding protein ssb - - ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 - - - ko00000,ko00001,ko03029,ko03032,ko03400 - - - SSB PHJFGMMN_03086 411477.PARMER_00854 3.1e-305 834.0 COG1253@1|root,COG1253@2|Bacteria,4NDZ7@976|Bacteroidetes,2FMEZ@200643|Bacteroidia,22WK3@171551|Porphyromonadaceae 976|Bacteroidetes S gliding motility-associated protein GldE gldE - - - - - - - - - - - CBS,CorC_HlyC,DUF21 PHJFGMMN_03087 411477.PARMER_00855 4.79e-140 395.0 293VW@1|root,2ZRB2@2|Bacteria,4NMK7@976|Bacteroidetes,2FUEE@200643|Bacteroidia,22YE1@171551|Porphyromonadaceae 976|Bacteroidetes S Gliding motility-associated lipoprotein GldD gldD - - - - - - - - - - - - PHJFGMMN_03088 411477.PARMER_00856 1.34e-145 410.0 COG2091@1|root,COG2091@2|Bacteria,4NSBI@976|Bacteroidetes,2FN3N@200643|Bacteroidia,22YHK@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the P-Pant transferase superfamily sfp - - - - - - - - - - - ACPS PHJFGMMN_03089 411477.PARMER_00857 1.1e-179 499.0 COG0169@1|root,COG0169@2|Bacteria,4NEBJ@976|Bacteroidetes,2FP6C@200643|Bacteroidia,22WMN@171551|Porphyromonadaceae 976|Bacteroidetes E Shikimate aroE - 1.1.1.25 ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02413 RC00206 ko00000,ko00001,ko00002,ko01000 - - - Shikimate_dh_N PHJFGMMN_03090 411477.PARMER_00858 4.85e-183 509.0 COG0500@1|root,COG2226@2|Bacteria,4NEDR@976|Bacteroidetes,2FMI3@200643|Bacteroidia,22XH4@171551|Porphyromonadaceae 976|Bacteroidetes H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) menG - 2.1.1.163,2.1.1.201 ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116,M00117 R04990,R04993,R06859,R08774,R09736 RC00003,RC01253,RC01662 ko00000,ko00001,ko00002,ko01000 - - - Ubie_methyltran PHJFGMMN_03091 411477.PARMER_00859 1.02e-230 634.0 COG0152@1|root,COG0152@2|Bacteria,4NF1Z@976|Bacteroidetes,2FPKZ@200643|Bacteroidia,22WD6@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis purC GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04591 RC00064,RC00162 ko00000,ko00001,ko00002,ko01000 - - - SAICAR_synt PHJFGMMN_03092 411477.PARMER_00860 4.01e-236 650.0 COG1702@1|root,COG1702@2|Bacteria,4NDYV@976|Bacteroidetes,2FMIF@200643|Bacteroidia,22W7X@171551|Porphyromonadaceae 976|Bacteroidetes T Phosphate starvation protein PhoH phoH - - ko:K06217 - - - - ko00000 - - - PhoH PHJFGMMN_03094 1236514.BAKL01000036_gene2992 0.000148 44.3 2DHJJ@1|root,3001Z@2|Bacteria,4P9VI@976|Bacteroidetes,2FVJJ@200643|Bacteroidia,4ATZB@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03095 411477.PARMER_00863 2.4e-153 431.0 29A5Q@1|root,2ZX6Q@2|Bacteria,4NP43@976|Bacteroidetes,2FPGZ@200643|Bacteroidia,22YB2@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03096 411477.PARMER_00864 0.0 2348.0 COG0507@1|root,COG1112@1|root,COG1502@1|root,COG0507@2|Bacteria,COG1112@2|Bacteria,COG1502@2|Bacteria,4NIRR@976|Bacteroidetes,2FQY4@200643|Bacteroidia 976|Bacteroidetes L AAA domain - - - - - - - - - - - - AAA_11,AAA_12,DUF2726,PLDc_2 PHJFGMMN_03097 411477.PARMER_00866 2.8e-85 250.0 COG0526@1|root,COG0526@2|Bacteria,4PMUP@976|Bacteroidetes,2G0GV@200643|Bacteroidia,231IA@171551|Porphyromonadaceae 976|Bacteroidetes O F plasmid transfer operon protein - - - - - - - - - - - - Thioredoxin PHJFGMMN_03098 411477.PARMER_00867 2.09e-131 373.0 COG1595@1|root,COG1595@2|Bacteria,4NS12@976|Bacteroidetes,2FQ76@200643|Bacteroidia,230N9@171551|Porphyromonadaceae 976|Bacteroidetes K ECF sigma factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_03099 411477.PARMER_00868 3.61e-244 671.0 COG3712@1|root,COG3712@2|Bacteria,4NM0I@976|Bacteroidetes,2FR5N@200643|Bacteroidia,23071@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_03100 411477.PARMER_00869 8.9e-59 202.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FW4E@200643|Bacteroidia,22XIY@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_03101 411477.PARMER_00869 0.0 2125.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FW4E@200643|Bacteroidia,22XIY@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_03102 411477.PARMER_00870 0.0 1301.0 COG1435@1|root,COG1435@2|Bacteria,4NKPJ@976|Bacteroidetes,2FQ2P@200643|Bacteroidia,2323U@171551|Porphyromonadaceae 976|Bacteroidetes F Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_03103 411477.PARMER_00871 3.92e-275 750.0 COG3507@1|root,COG3507@2|Bacteria,4NHZW@976|Bacteroidetes,2FM56@200643|Bacteroidia 976|Bacteroidetes G hydrolase, family 43 - - 3.2.1.99 ko:K06113 - - - - ko00000,ko01000 - GH43 - Glyco_hydro_43 PHJFGMMN_03104 411477.PARMER_00872 1.43e-234 645.0 COG3507@1|root,COG3507@2|Bacteria,4NGKH@976|Bacteroidetes,2FP3Q@200643|Bacteroidia,2307H@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 43 family abnA - - - - - - - - - - - Glyco_hydro_43 PHJFGMMN_03105 411477.PARMER_00874 0.0 1746.0 COG4354@1|root,COG4354@2|Bacteria,4NFQW@976|Bacteroidetes,2FQ1M@200643|Bacteroidia,22X7Y@171551|Porphyromonadaceae 976|Bacteroidetes G beta-glucosidase 2, glycosyl-hydrolase family 116 N-term - - 3.2.1.45 ko:K17108 ko00511,ko00600,ko01100,map00511,map00600,map01100 - R01498 RC00059,RC00451 ko00000,ko00001,ko01000 - GH116 - DUF608,Glyco_hydr_116N PHJFGMMN_03106 411477.PARMER_00875 2.14e-232 639.0 COG1524@1|root,COG1524@2|Bacteria,4NF0I@976|Bacteroidetes,2FNC7@200643|Bacteroidia,231G6@171551|Porphyromonadaceae 976|Bacteroidetes S Metalloenzyme superfamily - - - - - - - - - - - - Phosphodiest PHJFGMMN_03107 411477.PARMER_00876 0.0 994.0 COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,4NDXQ@976|Bacteroidetes,2FMKX@200643|Bacteroidia,22WM4@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the synthesis of xanthosine monophosphate by the NAD dependent oxidation of inosine monophosphate - - 1.1.1.205 ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 M00050 R01130,R08240 RC00143,RC02207 ko00000,ko00001,ko00002,ko01000,ko04147 - - - CBS,IMPDH PHJFGMMN_03108 411477.PARMER_00877 1.11e-183 509.0 COG1741@1|root,COG1741@2|Bacteria,4NGJ5@976|Bacteroidetes,2FPC1@200643|Bacteroidia,22XR8@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the pirin family - - - ko:K06911 - - - - ko00000 - - - Pirin PHJFGMMN_03109 411477.PARMER_00882 0.0 2073.0 COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22WRD@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_03110 411477.PARMER_00883 0.0 1202.0 2DB6Z@1|root,2Z7IY@2|Bacteria,4NIQG@976|Bacteroidetes,2FQ70@200643|Bacteroidia,22WEC@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_03111 411477.PARMER_00884 0.0 1174.0 28KYZ@1|root,2ZAEB@2|Bacteria,4NHBZ@976|Bacteroidetes,2FP4X@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - PHJFGMMN_03112 411477.PARMER_00885 0.0 1009.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 PHJFGMMN_03113 411477.PARMER_00886 0.0 881.0 COG2304@1|root,COG2304@2|Bacteria,4NFNQ@976|Bacteroidetes,2FMMK@200643|Bacteroidia,22VUS@171551|Porphyromonadaceae 976|Bacteroidetes S Peptidase M64 - - - - - - - - - - - - M64_N,Peptidase_M64 PHJFGMMN_03114 411477.PARMER_00887 0.0 1808.0 COG1629@1|root,COG4771@2|Bacteria,4NFAM@976|Bacteroidetes,2FPNR@200643|Bacteroidia,22Y08@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,OMP_b-brl_3,Plug,TonB_dep_Rec PHJFGMMN_03115 411477.PARMER_00889 0.0 926.0 2C1YQ@1|root,2ZAUF@2|Bacteria,4NI71@976|Bacteroidetes,2FQ0Z@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03116 411477.PARMER_00890 1.48e-248 681.0 COG1409@1|root,COG1409@2|Bacteria,4NJT5@976|Bacteroidetes,2G333@200643|Bacteroidia,22Z8K@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase - - 3.1.3.2 ko:K14379 ko00740,ko01100,ko04142,ko04380,ko05323,map00740,map01100,map04142,map04380,map05323 - R00548 RC00017 ko00000,ko00001,ko01000 - - - Metallophos PHJFGMMN_03117 411477.PARMER_00891 1.35e-282 773.0 COG4175@1|root,COG4175@2|Bacteria,4PM3T@976|Bacteroidetes,2FMA7@200643|Bacteroidia,22Y6H@171551|Porphyromonadaceae 976|Bacteroidetes E Domain in cystathionine beta-synthase and other proteins. proV - 3.6.3.32 ko:K02000 ko02010,map02010 M00208 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.12 - - ABC_tran,CBS PHJFGMMN_03118 411477.PARMER_00892 3.01e-185 516.0 COG4176@1|root,COG4176@2|Bacteria,4NH0P@976|Bacteroidetes,2FP5Z@200643|Bacteroidia,22YT1@171551|Porphyromonadaceae 976|Bacteroidetes P Binding-protein-dependent transport system inner membrane component - - - ko:K02001 ko02010,map02010 M00208 - - ko00000,ko00001,ko00002,ko02000 3.A.1.12 - - BPD_transp_1 PHJFGMMN_03119 411477.PARMER_00893 4.05e-208 575.0 COG2113@1|root,COG2113@2|Bacteria,4NI3D@976|Bacteroidetes,2G2MI@200643|Bacteroidia,2307W@171551|Porphyromonadaceae 976|Bacteroidetes E Substrate binding domain of ABC-type glycine betaine transport system - - - ko:K02002 ko02010,map02010 M00208 - - ko00000,ko00001,ko00002,ko02000 3.A.1.12 - - OpuAC PHJFGMMN_03120 999419.HMPREF1077_00673 7.44e-184 511.0 COG2755@1|root,COG2755@2|Bacteria,4NP73@976|Bacteroidetes,2FXPF@200643|Bacteroidia 976|Bacteroidetes E GDSL-like Lipase/Acylhydrolase - - - - - - - - - - - - Lipase_GDSL_2 PHJFGMMN_03121 411477.PARMER_00895 7.39e-113 323.0 COG1528@1|root,COG1528@2|Bacteria,4NGS7@976|Bacteroidetes,2FQD1@200643|Bacteroidia,22Y73@171551|Porphyromonadaceae 976|Bacteroidetes P Iron-storage protein ftnA - 1.16.3.2 ko:K02217 - - - - ko00000,ko01000 - - - Ferritin PHJFGMMN_03122 411477.PARMER_00896 3.02e-92 270.0 COG0071@1|root,COG0071@2|Bacteria,4NQXY@976|Bacteroidetes,2FS35@200643|Bacteroidia,22Y68@171551|Porphyromonadaceae 976|Bacteroidetes O Belongs to the small heat shock protein (HSP20) family hsp20 - - ko:K13993 ko04141,map04141 - - - ko00000,ko00001,ko03110 - - - HSP20 PHJFGMMN_03123 411477.PARMER_00897 0.0 978.0 COG1835@1|root,COG1835@2|Bacteria,4NRSG@976|Bacteroidetes,2G34Z@200643|Bacteroidia,22YUC@171551|Porphyromonadaceae 976|Bacteroidetes I Domain of unknown function (DUF4153) - - - - - - - - - - - - DUF4153 PHJFGMMN_03124 411477.PARMER_00898 2.19e-289 791.0 COG0738@1|root,COG0738@2|Bacteria,4NEYR@976|Bacteroidetes,2FP5F@200643|Bacteroidia,22W0X@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator Superfamily - - - ko:K02429 - - - - ko00000,ko02000 2.A.1.7 - - MFS_1 PHJFGMMN_03125 411477.PARMER_00899 6.56e-188 523.0 COG1360@1|root,COG1360@2|Bacteria,4NF2Y@976|Bacteroidetes,2FNVT@200643|Bacteroidia,22YDP@171551|Porphyromonadaceae 976|Bacteroidetes N OmpA family - - - ko:K02557 ko02030,ko02040,map02030,map02040 - - - ko00000,ko00001,ko02000,ko02035 1.A.30.1 - - OmpA PHJFGMMN_03126 411477.PARMER_00900 5.64e-315 858.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMPG@200643|Bacteroidia,22W7G@171551|Porphyromonadaceae 976|Bacteroidetes T COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - ko:K02481 - - - - ko00000,ko02022 - - - HTH_8,Response_reg,Sigma54_activat PHJFGMMN_03127 411477.PARMER_00902 0.0 1095.0 COG5002@1|root,COG5002@2|Bacteria,4NDTV@976|Bacteroidetes,2FP04@200643|Bacteroidia,22W6T@171551|Porphyromonadaceae 976|Bacteroidetes T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain covS - - - - - - - - - - - 4HB_MCP_1,HAMP,HATPase_c,HisKA,PAS PHJFGMMN_03128 411477.PARMER_00903 4.13e-294 805.0 COG2704@1|root,COG2704@2|Bacteria,4NGDF@976|Bacteroidetes,2FMD5@200643|Bacteroidia,22XEM@171551|Porphyromonadaceae 976|Bacteroidetes S Anaerobic c4-dicarboxylate membrane transporter dcuB - - ko:K07791,ko:K07792 ko02020,map02020 - - - ko00000,ko00001,ko02000 2.A.13.1 - - DcuA_DcuB PHJFGMMN_03129 411477.PARMER_00904 0.0 1728.0 COG3250@1|root,COG3250@2|Bacteria,4NEWN@976|Bacteroidetes,2FPM1@200643|Bacteroidia,22WWF@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 2 family - - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N PHJFGMMN_03130 411477.PARMER_00905 3.34e-208 575.0 295Z7@1|root,33C4F@2|Bacteria,4NZ3X@976|Bacteroidetes,2G0F8@200643|Bacteroidia 976|Bacteroidetes S Putative beta-lactamase-inhibitor-like, PepSY-like - - - - - - - - - - - - PepSY_like PHJFGMMN_03132 411477.PARMER_00907 2.92e-278 764.0 COG0845@1|root,COG0845@2|Bacteria,4NIJI@976|Bacteroidetes,2FNGW@200643|Bacteroidia,22WWG@171551|Porphyromonadaceae 976|Bacteroidetes M HlyD family secretion protein - - - ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,OEP PHJFGMMN_03133 411477.PARMER_00908 1.59e-271 746.0 COG0577@1|root,COG0577@2|Bacteria,4NI8K@976|Bacteroidetes,2FN4D@200643|Bacteroidia,22ZYF@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD PHJFGMMN_03134 411477.PARMER_00909 3.8e-312 849.0 COG0577@1|root,COG0577@2|Bacteria,4NHA3@976|Bacteroidetes,2FSB7@200643|Bacteroidia 976|Bacteroidetes V Efflux ABC transporter, permease protein - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD PHJFGMMN_03135 411477.PARMER_00910 8.26e-290 793.0 COG0577@1|root,COG0577@2|Bacteria,4NI8K@976|Bacteroidetes,2FR5S@200643|Bacteroidia,231S6@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD PHJFGMMN_03136 411477.PARMER_00911 0.0 867.0 COG0577@1|root,COG0577@2|Bacteria,4NHA3@976|Bacteroidetes,2FSB7@200643|Bacteroidia,22Z98@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD PHJFGMMN_03137 411477.PARMER_00912 1.05e-151 427.0 COG1136@1|root,COG1136@2|Bacteria,4NFDW@976|Bacteroidetes,2FPST@200643|Bacteroidia,22WS2@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter, ATP-binding protein ytrE_3 - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran PHJFGMMN_03139 411477.PARMER_00916 3.01e-131 372.0 COG0671@1|root,COG0671@2|Bacteria,4NP0U@976|Bacteroidetes,2G39R@200643|Bacteroidia,22Y5F@171551|Porphyromonadaceae 976|Bacteroidetes I Acid phosphatase homologues - - - - - - - - - - - - PAP2 PHJFGMMN_03142 411477.PARMER_00919 0.0 944.0 COG1538@1|root,COG1538@2|Bacteria,4NGXM@976|Bacteroidetes,2FMD9@200643|Bacteroidia,22XGY@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP PHJFGMMN_03143 411477.PARMER_00920 0.0 877.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMPG@200643|Bacteroidia,231SJ@171551|Porphyromonadaceae 976|Bacteroidetes T Sigma-54 interaction domain - - - ko:K02481 - - - - ko00000,ko02022 - - - HTH_8,Response_reg,Sigma54_activat PHJFGMMN_03144 411477.PARMER_00921 1.6e-305 833.0 COG5000@1|root,COG5000@2|Bacteria,4NFQN@976|Bacteroidetes,2FQJW@200643|Bacteroidia,22Z6G@171551|Porphyromonadaceae 976|Bacteroidetes T PAS domain - - - - - - - - - - - - HATPase_c,PAS,PAS_8 PHJFGMMN_03145 411477.PARMER_00922 1.11e-201 557.0 COG1234@1|root,COG1234@2|Bacteria,4NH9K@976|Bacteroidetes,2FP6X@200643|Bacteroidia,22W15@171551|Porphyromonadaceae 976|Bacteroidetes S Metallo-beta-lactamase superfamily - - 3.1.26.11 ko:K00784 ko03013,map03013 - - - ko00000,ko00001,ko01000,ko03016 - - - Lactamase_B_2 PHJFGMMN_03146 411477.PARMER_00923 4.24e-163 457.0 COG0457@1|root,COG0457@2|Bacteria,4NQ8Q@976|Bacteroidetes,2FQ4C@200643|Bacteroidia,22Y4A@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG28004 non supervised orthologous group - - - ko:K02651 ko04112,map04112 - - - ko00000,ko00001,ko02035,ko02044 - - - TPR_16,TPR_8 PHJFGMMN_03147 411477.PARMER_00924 0.0 2144.0 COG0653@1|root,COG0653@2|Bacteria,4NF7C@976|Bacteroidetes,2FMVF@200643|Bacteroidia,22WWV@171551|Porphyromonadaceae 976|Bacteroidetes U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane secA - - ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 - - Helicase_C,SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW PHJFGMMN_03148 411477.PARMER_00925 0.0 1102.0 COG3119@1|root,COG3119@2|Bacteria,4PKER@976|Bacteroidetes,2G3EN@200643|Bacteroidia,22W42@171551|Porphyromonadaceae 976|Bacteroidetes P Type I phosphodiesterase / nucleotide pyrophosphatase pafA - - - - - - - - - - - Phosphodiest PHJFGMMN_03149 411477.PARMER_00926 8.04e-300 816.0 28I3N@1|root,2Z87C@2|Bacteria,4NE8P@976|Bacteroidetes,2FMN4@200643|Bacteroidia,22WN0@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4105) - - - - - - - - - - - - DUF4105 PHJFGMMN_03150 411477.PARMER_00928 0.0 2752.0 COG3250@1|root,COG3250@2|Bacteria,4NF3W@976|Bacteroidetes,2FM0P@200643|Bacteroidia,22W8R@171551|Porphyromonadaceae 976|Bacteroidetes G beta-galactosidase - - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - Bgal_small_N,DUF4981,F5_F8_type_C,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N PHJFGMMN_03151 411477.PARMER_00929 1.29e-153 434.0 COG1521@1|root,COG1521@2|Bacteria,4NE9E@976|Bacteroidetes,2FMPK@200643|Bacteroidia,22XYI@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis coaX - 2.7.1.33 ko:K03525 ko00770,ko01100,map00770,map01100 M00120 R02971,R03018,R04391 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - Pan_kinase PHJFGMMN_03152 411477.PARMER_00930 2.32e-308 840.0 COG2067@1|root,COG2067@2|Bacteria,4NEP1@976|Bacteroidetes,2FN33@200643|Bacteroidia,22W7P@171551|Porphyromonadaceae 976|Bacteroidetes I Psort location OuterMembrane, score - - - - - - - - - - - - Toluene_X PHJFGMMN_03153 411477.PARMER_00931 0.0 912.0 COG0457@1|root,COG0457@2|Bacteria,4NF7U@976|Bacteroidetes,2FP0S@200643|Bacteroidia,22XHG@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat protein - - - - - - - - - - - - TPR_8 PHJFGMMN_03154 411477.PARMER_00932 2.68e-171 478.0 COG3117@1|root,COG3117@2|Bacteria,4NRIN@976|Bacteroidetes,2FP9Z@200643|Bacteroidia,22Y9S@171551|Porphyromonadaceae 976|Bacteroidetes S Lipopolysaccharide-assembly, LptC-related - - - - - - - - - - - - LptC PHJFGMMN_03155 411477.PARMER_00933 2.94e-282 773.0 COG1253@1|root,COG1253@2|Bacteria,4NG0I@976|Bacteroidetes,2FMR1@200643|Bacteroidia,22X0Y@171551|Porphyromonadaceae 976|Bacteroidetes S Hemolysin tlyC - - ko:K03699 - - - - ko00000,ko02042 - - - CBS,CorC_HlyC,DUF21 PHJFGMMN_03156 411477.PARMER_00934 0.0 1346.0 COG0760@1|root,COG0760@2|Bacteria,4NDZZ@976|Bacteroidetes,2FN8C@200643|Bacteroidia,22W3C@171551|Porphyromonadaceae 976|Bacteroidetes O peptidylprolyl isomerase ppiD - 5.2.1.8 ko:K01802,ko:K03770 - - - - ko00000,ko01000,ko03110 - - - Rotamase_2,Rotamase_3,SurA_N_2 PHJFGMMN_03157 999419.HMPREF1077_00714 6.16e-237 652.0 COG0820@1|root,COG0820@2|Bacteria,4NFH5@976|Bacteroidetes,2FPJH@200643|Bacteroidia,22WJ0@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs rlmN GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 ko:K06941 - - - - ko00000,ko01000,ko03009 - - - Fer4_14,Radical_SAM PHJFGMMN_03158 411477.PARMER_00938 5.88e-246 675.0 COG0322@1|root,COG0322@2|Bacteria,4NGEV@976|Bacteroidetes,2FNVF@200643|Bacteroidia,22XZM@171551|Porphyromonadaceae 976|Bacteroidetes L Domain of unknown function (DUF4837) - - - - - - - - - - - - DUF4837 PHJFGMMN_03159 411477.PARMER_00939 2.62e-261 716.0 COG1995@1|root,COG1995@2|Bacteria,4NEUR@976|Bacteroidetes,2FN0X@200643|Bacteroidia,22WSX@171551|Porphyromonadaceae 976|Bacteroidetes C Belongs to the PdxA family pdxA - 1.1.1.262 ko:K00097 ko00750,ko01100,map00750,map01100 M00124 R05681,R05837,R07406 RC00089,RC00675,RC01475 ko00000,ko00001,ko00002,ko01000 - - - PdxA PHJFGMMN_03160 411477.PARMER_00940 1.19e-107 310.0 COG0615@1|root,COG0615@2|Bacteria,4NM8I@976|Bacteroidetes,2FS6T@200643|Bacteroidia,22XQH@171551|Porphyromonadaceae 976|Bacteroidetes IM Glycerol-3-phosphate cytidylyltransferase aepX - 2.7.7.15,2.7.7.39,5.4.2.9 ko:K00968,ko:K00980,ko:K01841 ko00440,ko00564,ko01100,ko01120,ko01130,ko05231,map00440,map00564,map01100,map01120,map01130,map05231 M00090 R00661,R00856,R01890,R02590 RC00002,RC02792 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_like,PEP_mutase PHJFGMMN_03161 411477.PARMER_00941 5.23e-172 480.0 COG1028@1|root,COG1028@2|Bacteria,4NJKS@976|Bacteroidetes,2FQU2@200643|Bacteroidia,22XDC@171551|Porphyromonadaceae 976|Bacteroidetes IQ Dehydrogenase - - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short,adh_short_C2 PHJFGMMN_03162 411477.PARMER_00942 7.01e-212 585.0 COG0558@1|root,COG0558@2|Bacteria,4NG8X@976|Bacteroidetes,2FQ5M@200643|Bacteroidia,22WXQ@171551|Porphyromonadaceae 976|Bacteroidetes I CDP-alcohol phosphatidyltransferase - - - - - - - - - - - - CDP-OH_P_transf,HAD_2 PHJFGMMN_03163 411477.PARMER_00943 2.96e-203 561.0 COG0204@1|root,COG0204@2|Bacteria,4NF25@976|Bacteroidetes,2FSAD@200643|Bacteroidia,22XTQ@171551|Porphyromonadaceae 976|Bacteroidetes I Phosphate acyltransferases - - - - - - - - - - - - Acetyltransf_5,Acyltransferase PHJFGMMN_03164 411477.PARMER_00944 2e-266 731.0 COG2204@1|root,COG2204@2|Bacteria,4NDWI@976|Bacteroidetes,2FMNM@200643|Bacteroidia,22WGW@171551|Porphyromonadaceae 976|Bacteroidetes K ATPase (AAA fhlA - - - - - - - - - - - HTH_8,Sigma54_activat PHJFGMMN_03165 411477.PARMER_00945 1.7e-107 311.0 2CADI@1|root,32RR7@2|Bacteria,4NP51@976|Bacteroidetes,2FSVU@200643|Bacteroidia,22XZJ@171551|Porphyromonadaceae 976|Bacteroidetes S Lipopolysaccharide-assembly lptE - - - - - - - - - - - LptE PHJFGMMN_03166 411477.PARMER_00946 3.14e-179 499.0 28HHN@1|root,2Z7TA@2|Bacteria,4NEXR@976|Bacteroidetes,2FQ6G@200643|Bacteroidia,22Y7B@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_03167 411477.PARMER_00947 5.75e-72 217.0 COG1314@1|root,COG1314@2|Bacteria,4NUYQ@976|Bacteroidetes,2FSK4@200643|Bacteroidia,22YIT@171551|Porphyromonadaceae 976|Bacteroidetes U Preprotein translocase secG - - ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 - - SecG PHJFGMMN_03168 411477.PARMER_00948 4.26e-69 208.0 2E5N7@1|root,330D0@2|Bacteria,4NTFC@976|Bacteroidetes,2FU36@200643|Bacteroidia,22YHF@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4491) - - - - - - - - - - - - DUF4491 PHJFGMMN_03169 411477.PARMER_00949 2.56e-41 137.0 2EHID@1|root,33BAB@2|Bacteria,4NZER@976|Bacteroidetes,2FVZ7@200643|Bacteroidia,22Z0N@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03170 411477.PARMER_00950 8.44e-71 213.0 293FN@1|root,2ZQY2@2|Bacteria,4P7JA@976|Bacteroidetes,2FVVX@200643|Bacteroidia,2319M@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03173 411477.PARMER_00955 1.28e-113 325.0 COG0054@1|root,COG0054@2|Bacteria,4NNUC@976|Bacteroidetes,2FNGS@200643|Bacteroidia,22XPW@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin ribH GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R04457 RC00960 ko00000,ko00001,ko00002,ko01000 - - - DMRL_synthase PHJFGMMN_03174 411477.PARMER_00956 5.86e-157 441.0 COG0457@1|root,COG0457@2|Bacteria,4PKF6@976|Bacteroidetes,2FNWT@200643|Bacteroidia,22XM8@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_12,TPR_16,TPR_2,TPR_6,TPR_7,TPR_8 PHJFGMMN_03175 411477.PARMER_00957 2.08e-263 721.0 COG1195@1|root,COG1195@2|Bacteria,4NFHN@976|Bacteroidetes,2FMHP@200643|Bacteroidia,22W50@171551|Porphyromonadaceae 976|Bacteroidetes L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP recF - - ko:K03629 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - SMC_N PHJFGMMN_03176 411477.PARMER_00958 1.17e-61 189.0 COG5512@1|root,COG5512@2|Bacteria,4NSDR@976|Bacteroidetes,2FUN4@200643|Bacteroidia,22YQJ@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF721) - - - - - - - - - - - - DUF721 PHJFGMMN_03177 411477.PARMER_00959 4.99e-88 258.0 COG3339@1|root,COG3339@2|Bacteria,4NVY8@976|Bacteroidetes,2FUXD@200643|Bacteroidia,22Z0P@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1232) - - - - - - - - - - - - DUF1232 PHJFGMMN_03178 999419.HMPREF1077_00734 2.6e-107 310.0 COG0212@1|root,COG0212@2|Bacteria,4NQRG@976|Bacteroidetes,2FQQB@200643|Bacteroidia,22Y6E@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family fthC - 6.3.3.2 ko:K01934 ko00670,ko01100,map00670,map01100 - R02301 RC00183 ko00000,ko00001,ko01000 - - - 5-FTHF_cyc-lig PHJFGMMN_03179 411477.PARMER_00961 0.0 1147.0 COG0793@1|root,COG0793@2|Bacteria,4NEGV@976|Bacteroidetes,2FP0Y@200643|Bacteroidia,22W6I@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the peptidase S41A family ctp - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - PDZ_2,Peptidase_S41 PHJFGMMN_03180 411477.PARMER_00962 1.18e-99 289.0 COG2131@1|root,COG2131@2|Bacteria,4NM48@976|Bacteroidetes,2FRZ1@200643|Bacteroidia,22XV8@171551|Porphyromonadaceae 976|Bacteroidetes F deaminase comEB - 3.5.4.12 ko:K01493 ko00240,ko01100,map00240,map01100 M00429 R01663 RC00074 ko00000,ko00001,ko00002,ko01000,ko02044 - - - dCMP_cyt_deam_1 PHJFGMMN_03181 411477.PARMER_00963 0.0 1394.0 COG0339@1|root,COG0339@2|Bacteria,4NFYA@976|Bacteroidetes,2FN8J@200643|Bacteroidia,22X1E@171551|Porphyromonadaceae 976|Bacteroidetes E peptidase dcp - 3.4.15.5,3.4.24.70 ko:K01284,ko:K01414 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M3 PHJFGMMN_03182 411477.PARMER_00965 0.0 1330.0 COG3408@1|root,COG3408@2|Bacteria,4NF09@976|Bacteroidetes,2FMEX@200643|Bacteroidia,22X3H@171551|Porphyromonadaceae 976|Bacteroidetes G Glycogen debranching enzyme - - - - - - - - - - - - GDE_C,GDE_N PHJFGMMN_03183 999419.HMPREF1077_00739 0.0 877.0 COG0438@1|root,COG0438@2|Bacteria,4NEWR@976|Bacteroidetes,2FMW0@200643|Bacteroidia,22ZW9@171551|Porphyromonadaceae 976|Bacteroidetes M Starch synthase catalytic domain gmhA - 2.4.1.346 ko:K13668 - - R11703,R11704 - ko00000,ko01000,ko01003 - GT4 - Glyco_transf_4,Glyco_transf_5,Glycos_transf_1 PHJFGMMN_03184 411477.PARMER_00967 0.0 879.0 COG1449@1|root,COG1449@2|Bacteria,4NFXW@976|Bacteroidetes,2FMRY@200643|Bacteroidia,22Z9T@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 57 amyA - 3.2.1.1 ko:K07405 ko00500,ko01100,map00500,map01100 - R02108,R02112,R11262 - ko00000,ko00001,ko01000 - GH57 - Glyco_hydro_57 PHJFGMMN_03185 411477.PARMER_00968 0.0 920.0 28NG9@1|root,2ZCA6@2|Bacteria,4NMQX@976|Bacteroidetes,2G2BV@200643|Bacteroidia,22XUS@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4270) - - - - - - - - - - - - DUF4270 PHJFGMMN_03186 999419.HMPREF1077_00742 2.85e-208 575.0 COG0297@1|root,COG0297@2|Bacteria,4NFP8@976|Bacteroidetes,2FN7D@200643|Bacteroidia,22X24@171551|Porphyromonadaceae 976|Bacteroidetes G synthase glgA - 2.4.1.21 ko:K00703 ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026 M00565 R02421 RC00005 ko00000,ko00001,ko00002,ko01000,ko01003 - GT5 - Glyco_transf_5 PHJFGMMN_03187 411477.PARMER_00989 1.47e-205 568.0 COG0414@1|root,COG0414@2|Bacteria,4NFT9@976|Bacteroidetes,2FN90@200643|Bacteroidia,22X8F@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate panC GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 ko:K01918 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 M00119 R02473 RC00096,RC00141 ko00000,ko00001,ko00002,ko01000 - - - Pantoate_ligase PHJFGMMN_03188 411477.PARMER_00990 7.88e-79 234.0 COG0853@1|root,COG0853@2|Bacteria,4NQ42@976|Bacteroidetes,2FSH0@200643|Bacteroidia,22XW8@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine panD - 4.1.1.11 ko:K01579 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 M00119 R00489 RC00299 ko00000,ko00001,ko00002,ko01000 - - - Asp_decarbox PHJFGMMN_03189 411477.PARMER_00991 3.29e-297 813.0 COG0534@1|root,COG0534@2|Bacteria,4NFIR@976|Bacteroidetes,2FMSA@200643|Bacteroidia,22X5G@171551|Porphyromonadaceae 976|Bacteroidetes V COG0534 Na -driven multidrug efflux pump - - - - - - - - - - - - MatE PHJFGMMN_03190 411477.PARMER_00992 8.55e-305 832.0 COG0541@1|root,COG0541@2|Bacteria,4NDZ2@976|Bacteroidetes,2FNSI@200643|Bacteroidia,22WC4@171551|Porphyromonadaceae 976|Bacteroidetes U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY ffh - 3.6.5.4 ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko01000,ko02044 3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9 - - SRP54,SRP54_N,SRP_SPB PHJFGMMN_03191 411477.PARMER_00993 3.76e-213 588.0 COG0190@1|root,COG0190@2|Bacteria,4NEJP@976|Bacteroidetes,2FMNT@200643|Bacteroidia,22X77@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate folD GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R01220,R01655 RC00202,RC00578 ko00000,ko00001,ko00002,ko01000 - - - THF_DHG_CYH,THF_DHG_CYH_C PHJFGMMN_03192 411477.PARMER_00994 1.11e-264 724.0 COG2843@1|root,COG2843@2|Bacteria,4NGD2@976|Bacteroidetes,2FQ0M@200643|Bacteroidia,2320N@171551|Porphyromonadaceae 976|Bacteroidetes M Bacterial capsule synthesis protein - - - ko:K07282 - - - - ko00000 - - - PGA_cap PHJFGMMN_03194 411477.PARMER_00996 1.25e-302 825.0 COG3666@1|root,COG3666@2|Bacteria,4NEDD@976|Bacteroidetes,2FNIQ@200643|Bacteroidia,22WUY@171551|Porphyromonadaceae 976|Bacteroidetes L COG3666 Transposase and inactivated derivatives - - - - - - - - - - - - DDE_Tnp_1,DDE_Tnp_1_6,DUF772 PHJFGMMN_03195 411477.PARMER_00997 1.37e-76 228.0 COG3666@1|root,COG3666@2|Bacteria,4NEDD@976|Bacteroidetes,2FNIQ@200643|Bacteroidia,22WUY@171551|Porphyromonadaceae 976|Bacteroidetes L COG3666 Transposase and inactivated derivatives - - - - - - - - - - - - DDE_Tnp_1,DDE_Tnp_1_6,DUF772 PHJFGMMN_03197 411477.PARMER_01000 4.16e-259 710.0 COG1559@1|root,COG1559@2|Bacteria,4NG17@976|Bacteroidetes,2FMVX@200643|Bacteroidia,22W7W@171551|Porphyromonadaceae 976|Bacteroidetes S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation mltG - - ko:K07082 - - - - ko00000 - - - YceG PHJFGMMN_03198 411477.PARMER_01001 0.0 1058.0 COG4231@1|root,COG4231@2|Bacteria,4NJM1@976|Bacteroidetes,2FMYS@200643|Bacteroidia,22X57@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates iorA - 1.2.7.8 ko:K00179 - - - - br01601,ko00000,ko01000 - - - POR_N,TPP_enzyme_C PHJFGMMN_03199 411477.PARMER_01003 6.93e-131 372.0 COG1014@1|root,COG1014@2|Bacteria,4NGN3@976|Bacteroidetes,2FP78@200643|Bacteroidia,22X20@171551|Porphyromonadaceae 976|Bacteroidetes C Indolepyruvate iorB - 1.2.7.8 ko:K00180 - - - - br01601,ko00000,ko01000 - - - POR PHJFGMMN_03200 411477.PARMER_01004 1.72e-120 343.0 COG0526@1|root,COG0526@2|Bacteria,4NR1K@976|Bacteroidetes,2FS53@200643|Bacteroidia,22YKA@171551|Porphyromonadaceae 976|Bacteroidetes CO SCO1/SenC - - - - - - - - - - - - AhpC-TSA,Redoxin PHJFGMMN_03201 411477.PARMER_01005 1.4e-190 528.0 COG2768@1|root,COG2768@2|Bacteria,4NFRZ@976|Bacteroidetes,2FNGT@200643|Bacteroidia,22WVW@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S binding domain - - - - - - - - - - - - Fer4 PHJFGMMN_03202 411477.PARMER_01006 0.0 1662.0 COG3408@1|root,COG3408@2|Bacteria,4NHHR@976|Bacteroidetes,2FQXQ@200643|Bacteroidia 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - - - - - - - - - - Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N PHJFGMMN_03205 616991.JPOO01000003_gene1097 1.01e-34 122.0 2EBGV@1|root,335HF@2|Bacteria,4NV5E@976|Bacteroidetes,1I6Q2@117743|Flavobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03206 411477.PARMER_03667 6e-267 732.0 COG4191@1|root,COG4191@2|Bacteria,4NEMP@976|Bacteroidetes,2FPJR@200643|Bacteroidia,22VVD@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase vicK - - - - - - - - - - - HATPase_c PHJFGMMN_03207 411477.PARMER_03668 6.51e-140 395.0 COG1399@1|root,COG1399@2|Bacteria,4NMQT@976|Bacteroidetes,2FPCJ@200643|Bacteroidia,22XVX@171551|Porphyromonadaceae 976|Bacteroidetes S Uncharacterized ACR, COG1399 - - - - - - - - - - - - DUF177 PHJFGMMN_03208 411477.PARMER_03669 1.73e-40 133.0 COG0333@1|root,COG0333@2|Bacteria,4NUXU@976|Bacteroidetes,2FUZD@200643|Bacteroidia,22YPG@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bL32 family rpmF - - ko:K02911 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011,ko03029 - - - Ribosomal_L32p PHJFGMMN_03209 411477.PARMER_03670 3.37e-250 685.0 COG0332@1|root,COG0332@2|Bacteria,4NEYH@976|Bacteroidetes,2FM5X@200643|Bacteroidia,22VVW@171551|Porphyromonadaceae 976|Bacteroidetes I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids fabH - 2.3.1.180 ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00082,M00083 R10707 RC00004,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACP_syn_III,ACP_syn_III_C PHJFGMMN_03210 411477.PARMER_03671 6.97e-208 575.0 COG1159@1|root,COG1159@2|Bacteria,4NES2@976|Bacteroidetes,2FN64@200643|Bacteroidia,22WCP@171551|Porphyromonadaceae 976|Bacteroidetes S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism era - - ko:K03595 - - - - ko00000,ko03009,ko03029 - - - KH_2,MMR_HSR1 PHJFGMMN_03211 411477.PARMER_03672 0.0 868.0 COG1160@1|root,COG1160@2|Bacteria,4NE2J@976|Bacteroidetes,2FN63@200643|Bacteroidia,22VY2@171551|Porphyromonadaceae 976|Bacteroidetes S GTPase that plays an essential role in the late steps of ribosome biogenesis der - - ko:K03977 - - - - ko00000,ko03009 - - - KH_dom-like,MMR_HSR1 PHJFGMMN_03213 411477.PARMER_03674 0.0 1223.0 COG3934@1|root,COG3934@2|Bacteria,4NF13@976|Bacteroidetes,2FNPI@200643|Bacteroidia,22X47@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF4091) - - - - - - - - - - - - DUF4091 PHJFGMMN_03214 999419.HMPREF1077_02179 1.03e-267 731.0 COG0535@1|root,COG0535@2|Bacteria,4NHXT@976|Bacteroidetes,2FN32@200643|Bacteroidia,22WJH@171551|Porphyromonadaceae 976|Bacteroidetes C Radical SAM domain protein - - - - - - - - - - - - Fer4_12,Radical_SAM,SPASM PHJFGMMN_03215 411477.PARMER_03677 2.69e-114 327.0 2E9KC@1|root,333T4@2|Bacteria,4NWT8@976|Bacteroidetes,2FUP9@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03216 411477.PARMER_03679 0.0 1191.0 COG1132@1|root,COG1132@2|Bacteria,4NE2D@976|Bacteroidetes,2FMUK@200643|Bacteroidia,22VY0@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter, ATP-binding protein msbA - - ko:K06147,ko:K11085 ko02010,map02010 - - - ko00000,ko00001,ko01000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 - - ABC_membrane,ABC_tran PHJFGMMN_03217 411477.PARMER_03680 3.39e-266 728.0 COG2730@1|root,COG2730@2|Bacteria,4NJFV@976|Bacteroidetes,2FQ62@200643|Bacteroidia 976|Bacteroidetes G Belongs to the glycosyl hydrolase 5 (cellulase A) family celC - 3.2.1.4 ko:K01179 ko00500,ko01100,map00500,map01100 - R06200,R11307,R11308 - ko00000,ko00001,ko01000 - GH5,GH9 - Cellulase PHJFGMMN_03218 411477.PARMER_03681 0.0 1657.0 COG1554@1|root,COG1554@2|Bacteria,4NEWW@976|Bacteroidetes,2FMF9@200643|Bacteroidia,22W4V@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 65, N-terminal domain - - 3.2.1.51 ko:K15923 ko00511,map00511 - - - ko00000,ko00001,ko01000 - GH95 - Glyco_hyd_65N_2 PHJFGMMN_03219 411477.PARMER_03682 1.78e-308 838.0 COG3637@1|root,COG3637@2|Bacteria,4NGSV@976|Bacteroidetes,2FQ5B@200643|Bacteroidia,22W52@171551|Porphyromonadaceae 976|Bacteroidetes M Phosphate-selective porin O and P - - - - - - - - - - - - Porin_O_P PHJFGMMN_03220 411477.PARMER_03683 1.56e-155 437.0 COG0704@1|root,COG0704@2|Bacteria,4NNT5@976|Bacteroidetes,2FNP4@200643|Bacteroidia,22XQJ@171551|Porphyromonadaceae 976|Bacteroidetes P Plays a role in the regulation of phosphate uptake phoU - - ko:K02039 - - - - ko00000 - - - PhoU PHJFGMMN_03221 411477.PARMER_03684 3.16e-181 504.0 COG1117@1|root,COG1117@2|Bacteria,4NFAB@976|Bacteroidetes,2FMN7@200643|Bacteroidia,22XA4@171551|Porphyromonadaceae 976|Bacteroidetes P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system pstB - 3.6.3.27 ko:K02036 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.7 - - ABC_tran PHJFGMMN_03222 411477.PARMER_03685 3.28e-201 558.0 COG0581@1|root,COG0581@2|Bacteria,4NGBA@976|Bacteroidetes,2FP5W@200643|Bacteroidia,22WKG@171551|Porphyromonadaceae 976|Bacteroidetes P phosphate transport system permease pstA - - ko:K02038 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - BPD_transp_1 PHJFGMMN_03223 411477.PARMER_03686 0.0 870.0 COG0226@1|root,COG0573@1|root,COG0226@2|Bacteria,COG0573@2|Bacteria,4NFDD@976|Bacteroidetes,2FNIH@200643|Bacteroidia,22WSA@171551|Porphyromonadaceae 976|Bacteroidetes P probably responsible for the translocation of the substrate across the membrane pstC - - ko:K02037 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - BPD_transp_1,PBP_like_2 PHJFGMMN_03224 411477.PARMER_03688 4.3e-299 814.0 COG4225@1|root,COG4225@2|Bacteria,4NDYS@976|Bacteroidetes,2FM61@200643|Bacteroidia,22XBT@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl Hydrolase Family 88 - - - - - - - - - - - - Glyco_hydro_88 PHJFGMMN_03225 411477.PARMER_03689 1.07e-307 837.0 COG4289@1|root,COG4289@2|Bacteria,4NEU3@976|Bacteroidetes,2G2NU@200643|Bacteroidia,22X3B@171551|Porphyromonadaceae 976|Bacteroidetes S Uncharacterized protein conserved in bacteria (DUF2264) - - - - - - - - - - - - DUF2264,Glyco_hydro_16 PHJFGMMN_03226 411477.PARMER_03690 2.97e-210 580.0 COG3717@1|root,COG3717@2|Bacteria,4NDUV@976|Bacteroidetes,2FMP5@200643|Bacteroidia,22W8B@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate kduI - 5.3.1.17 ko:K01815 ko00040,map00040 - R04383 RC00541 ko00000,ko00001,ko01000 - - - KduI PHJFGMMN_03227 411477.PARMER_03691 1.62e-185 516.0 COG1028@1|root,COG1028@2|Bacteria,4NFDX@976|Bacteroidetes,2FMSH@200643|Bacteroidia,22XE4@171551|Porphyromonadaceae 976|Bacteroidetes IQ KR domain idnO - 1.1.1.69 ko:K00046 - - - - ko00000,ko01000 - - - adh_short_C2 PHJFGMMN_03228 411477.PARMER_03692 3.97e-277 757.0 COG1672@1|root,COG1672@2|Bacteria,4NK7Z@976|Bacteroidetes,2G2GJ@200643|Bacteroidia,231IQ@171551|Porphyromonadaceae 976|Bacteroidetes S ATPase domain predominantly from Archaea - - - - - - - - - - - - ATPase_2 PHJFGMMN_03229 411477.PARMER_03693 0.0 1001.0 COG0427@1|root,COG0427@2|Bacteria,4NFS3@976|Bacteroidetes,2FNCA@200643|Bacteroidia,22WU5@171551|Porphyromonadaceae 976|Bacteroidetes C acetyl-CoA hydrolase scpC - 2.8.3.18,3.1.2.1 ko:K01067,ko:K18118 ko00020,ko00620,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00650,map01100,map01110,map01120,map01130,map01200 M00009,M00011 R00227,R10343 RC00004,RC00012,RC00014 ko00000,ko00001,ko00002,ko01000 - - - AcetylCoA_hyd_C,AcetylCoA_hydro PHJFGMMN_03232 411477.PARMER_03695 0.0 894.0 COG0621@1|root,COG0621@2|Bacteria,4NDU6@976|Bacteroidetes,2FNP7@200643|Bacteroidia,22W5Y@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine miaB - 2.8.4.3 ko:K06168 - - R10645,R10646,R10647 RC00003,RC00980,RC03221,RC03222 ko00000,ko01000,ko03016 - - - Radical_SAM,TRAM,UPF0004 PHJFGMMN_03234 411477.PARMER_03319 1.37e-47 194.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03236 411477.PARMER_03700 1.3e-185 518.0 COG2177@1|root,COG2177@2|Bacteria,4NH05@976|Bacteroidetes,2FM17@200643|Bacteroidia,22WWC@171551|Porphyromonadaceae 976|Bacteroidetes D Belongs to the ABC-4 integral membrane protein family. FtsX subfamily ftsX GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976 - ko:K09811 ko02010,map02010 M00256 - - ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 - - FtsX PHJFGMMN_03237 411477.PARMER_03701 2.26e-49 157.0 2E6VD@1|root,331EZ@2|Bacteria,4NUSW@976|Bacteroidetes,2FTVZ@200643|Bacteroidia,22YMK@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3098) fjo13 - - - - - - - - - - - DUF3098 PHJFGMMN_03238 411477.PARMER_03702 6.56e-182 507.0 COG1968@1|root,COG1968@2|Bacteria,4NGIZ@976|Bacteroidetes,2FMST@200643|Bacteroidia,22X3R@171551|Porphyromonadaceae 976|Bacteroidetes V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin uppP - 3.6.1.27 ko:K06153 ko00550,map00550 - R05627 RC00002 ko00000,ko00001,ko01000,ko01011 - - - BacA PHJFGMMN_03239 411477.PARMER_03703 1.1e-165 463.0 COG0130@1|root,COG0130@2|Bacteria,4NESK@976|Bacteroidetes,2FMTY@200643|Bacteroidia,22X2S@171551|Porphyromonadaceae 976|Bacteroidetes J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs truB GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 ko:K03177 - - - - ko00000,ko01000,ko03016 - - - TruB_C_2,TruB_N PHJFGMMN_03240 411477.PARMER_03704 8.68e-256 701.0 COG0809@1|root,COG0809@2|Bacteria,4NF2T@976|Bacteroidetes,2FMFT@200643|Bacteroidia,22WR2@171551|Porphyromonadaceae 976|Bacteroidetes J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) queA - 2.4.99.17 ko:K07568 - - - - ko00000,ko01000,ko03016 - - - Queuosine_synth PHJFGMMN_03241 411477.PARMER_03705 1.64e-103 299.0 COG0801@1|root,COG0801@2|Bacteria,4NGE8@976|Bacteroidetes,2FSKM@200643|Bacteroidia,22Y7A@171551|Porphyromonadaceae 976|Bacteroidetes H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase folK - 2.7.6.3 ko:K00950 ko00790,ko01100,map00790,map01100 M00126,M00841 R03503 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - HPPK,dNK PHJFGMMN_03242 272559.BF9343_1313 0.000133 42.7 2ET3M@1|root,33KMT@2|Bacteria,4NZ74@976|Bacteroidetes,2FUM5@200643|Bacteroidia,4AS6V@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03243 411477.PARMER_03708 2.48e-311 848.0 COG0192@1|root,COG0192@2|Bacteria,4NG7Y@976|Bacteroidetes,2FNW8@200643|Bacteroidia,22WZI@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme metK - 2.5.1.6 ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 M00034,M00035,M00368,M00609 R00177,R04771 RC00021,RC01211 ko00000,ko00001,ko00002,ko01000 - - - S-AdoMet_synt_C,S-AdoMet_synt_M,S-AdoMet_synt_N PHJFGMMN_03244 411477.PARMER_03709 0.0 1927.0 COG0612@1|root,COG0612@2|Bacteria,4NDXM@976|Bacteroidetes,2FNQC@200643|Bacteroidia,22X8M@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the peptidase M16 family - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C PHJFGMMN_03245 411477.PARMER_03710 5.87e-183 509.0 COG1127@1|root,COG1127@2|Bacteria,4NETG@976|Bacteroidetes,2FM5W@200643|Bacteroidia,22X10@171551|Porphyromonadaceae 976|Bacteroidetes Q ABC transporter, ATP-binding protein metN - - ko:K02065 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - ABC_tran PHJFGMMN_03246 411477.PARMER_03711 2.17e-162 456.0 COG0767@1|root,COG0767@2|Bacteria,4NEZ8@976|Bacteroidetes,2FNVR@200643|Bacteroidia,22W48@171551|Porphyromonadaceae 976|Bacteroidetes Q COG0767 ABC-type transport system involved in resistance to organic solvents, permease component mlaE - - ko:K02066 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - MlaE PHJFGMMN_03247 411477.PARMER_03712 1.14e-177 495.0 COG1137@1|root,COG1137@2|Bacteria,4NDUG@976|Bacteroidetes,2FKZE@200643|Bacteroidia,22XAY@171551|Porphyromonadaceae 976|Bacteroidetes S ABC transporter lptB - - ko:K06861 ko02010,map02010 M00320 - - ko00000,ko00001,ko00002,ko01000,ko02000 1.B.42.1 - - ABC_tran,BCA_ABC_TP_C PHJFGMMN_03248 411477.PARMER_03713 8.38e-208 575.0 COG1266@1|root,COG1266@2|Bacteria,4NHE1@976|Bacteroidetes,2FT47@200643|Bacteroidia,22YC2@171551|Porphyromonadaceae 976|Bacteroidetes S CAAX protease self-immunity - - - ko:K07052 - - - - ko00000 - - - Abi PHJFGMMN_03249 411477.PARMER_03714 9.22e-49 155.0 COG0724@1|root,COG0724@2|Bacteria,4NSXX@976|Bacteroidetes,2FUB9@200643|Bacteroidia,22YK3@171551|Porphyromonadaceae 976|Bacteroidetes S RNA recognition motif - - - - - - - - - - - - RRM_1 PHJFGMMN_03250 411477.PARMER_03715 1.56e-312 853.0 COG0544@1|root,COG0544@2|Bacteria,4NE99@976|Bacteroidetes,2FM7B@200643|Bacteroidia,22WV0@171551|Porphyromonadaceae 976|Bacteroidetes O Trigger factor tig - - ko:K03545 - - - - ko00000 - - - Trigger_C,Trigger_N PHJFGMMN_03251 411477.PARMER_03717 4.67e-155 435.0 COG0740@1|root,COG0740@2|Bacteria,4NE20@976|Bacteroidetes,2FN8E@200643|Bacteroidia,22W88@171551|Porphyromonadaceae 976|Bacteroidetes O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins clpP - 3.4.21.92 ko:K01358 ko04112,ko04212,map04112,map04212 - - - ko00000,ko00001,ko01000,ko01002 - - - CLP_protease PHJFGMMN_03252 999419.HMPREF1077_02221 1.94e-287 786.0 COG1219@1|root,COG1219@2|Bacteria,4NE1B@976|Bacteroidetes,2FMQV@200643|Bacteroidia,22W68@171551|Porphyromonadaceae 976|Bacteroidetes O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP clpX GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - ko:K03544 ko04112,map04112 - - - ko00000,ko00001,ko03110 - - - AAA_2,ClpB_D2-small,zf-C4_ClpX PHJFGMMN_03253 411477.PARMER_03719 0.0 1412.0 COG0514@1|root,COG0514@2|Bacteria,4NEB4@976|Bacteroidetes,2FMBR@200643|Bacteroidia,22WPI@171551|Porphyromonadaceae 976|Bacteroidetes L ATP-dependent DNA helicase RecQ recQ - 3.6.4.12 ko:K03654 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,HRDC,Helicase_C,RQC,RecQ_Zn_bind PHJFGMMN_03254 435591.BDI_2393 6.83e-05 47.8 COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,4NDXQ@976|Bacteroidetes,2FMKX@200643|Bacteroidia,22VX7@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth guaB - 1.1.1.205 ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 M00050 R01130,R08240 RC00143,RC02207 ko00000,ko00001,ko00002,ko01000,ko04147 - - - CBS,IMPDH PHJFGMMN_03255 411477.PARMER_03724 0.0 1042.0 COG0760@1|root,COG0760@2|Bacteria,4NGIR@976|Bacteroidetes,2FNS9@200643|Bacteroidia,22VWY@171551|Porphyromonadaceae 976|Bacteroidetes M peptidylprolyl isomerase - - 5.2.1.8 ko:K03771 - - - - ko00000,ko01000,ko03110 - - - Rotamase,Rotamase_2,Rotamase_3 PHJFGMMN_03256 999419.HMPREF1077_02225 5.43e-195 541.0 COG0760@1|root,COG0760@2|Bacteria,4NG2P@976|Bacteroidetes,2FMWD@200643|Bacteroidia,22XXI@171551|Porphyromonadaceae 976|Bacteroidetes O COG NOG23400 non supervised orthologous group - - - - - - - - - - - - Rotamase_2 PHJFGMMN_03257 411477.PARMER_03726 0.0 882.0 COG0760@1|root,COG0760@2|Bacteria,4NEW0@976|Bacteroidetes,2FMDU@200643|Bacteroidia,22WD3@171551|Porphyromonadaceae 976|Bacteroidetes M peptidylprolyl isomerase surA - 5.2.1.8 ko:K03771 - - - - ko00000,ko01000,ko03110 - - - Rotamase,SurA_N_3 PHJFGMMN_03258 411477.PARMER_03727 0.0 1123.0 COG1934@1|root,COG1934@2|Bacteria,4PKT4@976|Bacteroidetes,2G3HG@200643|Bacteroidia,22W2I@171551|Porphyromonadaceae 976|Bacteroidetes S OstA-like protein - - - - - - - - - - - - OstA_2 PHJFGMMN_03259 411477.PARMER_03728 1.14e-68 207.0 2EH2Q@1|root,33AUP@2|Bacteria,4NXI6@976|Bacteroidetes,2FT92@200643|Bacteroidia,22YX5@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG23401 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_03260 411477.PARMER_03729 0.0 1216.0 COG0323@1|root,COG0323@2|Bacteria,4NDWJ@976|Bacteroidetes,2FMIK@200643|Bacteroidia,22X0H@171551|Porphyromonadaceae 976|Bacteroidetes L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex mutL GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - ko:K03572 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - DNA_mis_repair,HATPase_c_3,MutL_C PHJFGMMN_03261 411477.PARMER_03731 1.52e-89 263.0 COG0048@1|root,COG0048@2|Bacteria,4NM3Y@976|Bacteroidetes,2FRY7@200643|Bacteroidia,22XMF@171551|Porphyromonadaceae 976|Bacteroidetes J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit rpsL GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02950 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosom_S12_S23 PHJFGMMN_03262 411477.PARMER_03732 9.78e-107 309.0 COG0049@1|root,COG0049@2|Bacteria,4NEEM@976|Bacteroidetes,2FNKP@200643|Bacteroidia,22WEA@171551|Porphyromonadaceae 976|Bacteroidetes J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA rpsG GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02992 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S7 PHJFGMMN_03263 411477.PARMER_03733 0.0 1393.0 COG0480@1|root,COG0480@2|Bacteria,4NE9X@976|Bacteroidetes,2FM1M@200643|Bacteroidia,22W0K@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome fusA - - ko:K02355 - - - - ko00000,ko03012,ko03029 - - - EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2 PHJFGMMN_03264 1122931.AUAE01000024_gene3715 2.7e-62 191.0 COG0051@1|root,COG0051@2|Bacteria,4NQ65@976|Bacteroidetes,2FT32@200643|Bacteroidia,22Y83@171551|Porphyromonadaceae 976|Bacteroidetes J Involved in the binding of tRNA to the ribosomes rpsJ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02946 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S10 PHJFGMMN_03265 411477.PARMER_03735 2.73e-146 412.0 COG0087@1|root,COG0087@2|Bacteria,4NEAN@976|Bacteroidetes,2FMS5@200643|Bacteroidia,22VWW@171551|Porphyromonadaceae 976|Bacteroidetes J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit rplC - - ko:K02906 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L3 PHJFGMMN_03266 411477.PARMER_03736 2.7e-139 394.0 COG0088@1|root,COG0088@2|Bacteria,4NEWZ@976|Bacteroidetes,2FM1W@200643|Bacteroidia,22VXN@171551|Porphyromonadaceae 976|Bacteroidetes J Forms part of the polypeptide exit tunnel rplD GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02926 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L4 PHJFGMMN_03267 411477.PARMER_03737 1.66e-61 189.0 COG0089@1|root,COG0089@2|Bacteria,4NS7H@976|Bacteroidetes,2FT3A@200643|Bacteroidia,22YD1@171551|Porphyromonadaceae 976|Bacteroidetes J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome rplW - - ko:K02892 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L23 PHJFGMMN_03268 411477.PARMER_03738 5.7e-196 543.0 COG0090@1|root,COG0090@2|Bacteria,4NE8G@976|Bacteroidetes,2FN89@200643|Bacteroidia,22X09@171551|Porphyromonadaceae 976|Bacteroidetes J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity rplB - - ko:K02886 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L2,Ribosomal_L2_C PHJFGMMN_03269 1235803.C825_01073 2.12e-58 180.0 COG0185@1|root,COG0185@2|Bacteria,4NQ8T@976|Bacteroidetes,2FT46@200643|Bacteroidia,22Y5Y@171551|Porphyromonadaceae 976|Bacteroidetes J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA rpsS GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - ko:K02965 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S19 PHJFGMMN_03270 411477.PARMER_03740 1.52e-89 263.0 COG0091@1|root,COG0091@2|Bacteria,4NQ8E@976|Bacteroidetes,2FS3J@200643|Bacteroidia,22XWQ@171551|Porphyromonadaceae 976|Bacteroidetes J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome rplV - - ko:K02890 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L22 PHJFGMMN_03271 411477.PARMER_03741 5.19e-168 470.0 COG0092@1|root,COG0092@2|Bacteria,4NE9F@976|Bacteroidetes,2FMYX@200643|Bacteroidia,22W3B@171551|Porphyromonadaceae 976|Bacteroidetes J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation rpsC GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02982 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - KH_2,Ribosomal_S3_C PHJFGMMN_03272 1235803.C825_01070 3.95e-98 285.0 COG0197@1|root,COG0197@2|Bacteria,4NM87@976|Bacteroidetes,2FRZE@200643|Bacteroidia,22XNJ@171551|Porphyromonadaceae 976|Bacteroidetes J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs rplP GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - ko:K02878 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L16 PHJFGMMN_03273 411477.PARMER_03743 1.55e-34 118.0 COG0255@1|root,COG0255@2|Bacteria,4NUSC@976|Bacteroidetes,2FUJB@200643|Bacteroidia,22YR4@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the universal ribosomal protein uL29 family rpmC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02904 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L29 PHJFGMMN_03274 411477.PARMER_03744 1.04e-54 171.0 COG0186@1|root,COG0186@2|Bacteria,4NSB2@976|Bacteroidetes,2FTXY@200643|Bacteroidia,22YB5@171551|Porphyromonadaceae 976|Bacteroidetes J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA rpsQ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02961 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S17 PHJFGMMN_03275 1122931.AUAE01000024_gene3726 1.13e-77 231.0 COG0093@1|root,COG0093@2|Bacteria,4NNM6@976|Bacteroidetes,2FSG8@200643|Bacteroidia,22XX5@171551|Porphyromonadaceae 976|Bacteroidetes J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome rplN GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - ko:K02874 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L14 PHJFGMMN_03276 411477.PARMER_03746 1.3e-69 210.0 COG0198@1|root,COG0198@2|Bacteria,4NSTI@976|Bacteroidetes,2FT5V@200643|Bacteroidia,22Y4Z@171551|Porphyromonadaceae 976|Bacteroidetes J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit rplX GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02895 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - KOW,ribosomal_L24 PHJFGMMN_03277 411477.PARMER_03747 1.48e-122 350.0 COG0094@1|root,COG0094@2|Bacteria,4NEGY@976|Bacteroidetes,2FM5Y@200643|Bacteroidia,22VVF@171551|Porphyromonadaceae 976|Bacteroidetes J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits rplE GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02931 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L5,Ribosomal_L5_C PHJFGMMN_03278 411477.PARMER_03748 2.79e-54 170.0 COG0199@1|root,COG0199@2|Bacteria,4NQ6N@976|Bacteroidetes,2FTD0@200643|Bacteroidia,22Y99@171551|Porphyromonadaceae 976|Bacteroidetes J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site rpsN GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02954 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S14 PHJFGMMN_03279 411477.PARMER_03749 3.51e-88 259.0 COG0096@1|root,COG0096@2|Bacteria,4NNFW@976|Bacteroidetes,2FRZ6@200643|Bacteroidia,22Y1I@171551|Porphyromonadaceae 976|Bacteroidetes J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit rpsH GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02994 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S8 PHJFGMMN_03280 411477.PARMER_03750 8.32e-128 363.0 COG0097@1|root,COG0097@2|Bacteria,4NGJM@976|Bacteroidetes,2FNEG@200643|Bacteroidia,22WAQ@171551|Porphyromonadaceae 976|Bacteroidetes J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center rplF GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02933 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L6 PHJFGMMN_03281 411477.PARMER_03751 4.21e-72 217.0 COG0256@1|root,COG0256@2|Bacteria,4NQAS@976|Bacteroidetes,2FSHX@200643|Bacteroidia,22Y3P@171551|Porphyromonadaceae 976|Bacteroidetes J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance rplR GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - ko:K02881 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L18p PHJFGMMN_03282 411477.PARMER_03752 6.86e-113 325.0 COG0098@1|root,COG0098@2|Bacteria,4NG1Z@976|Bacteroidetes,2FMI8@200643|Bacteroidia,22WQ5@171551|Porphyromonadaceae 976|Bacteroidetes J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body rpsE - - ko:K02988 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S5,Ribosomal_S5_C PHJFGMMN_03283 411477.PARMER_03753 2.04e-31 110.0 COG1841@1|root,COG1841@2|Bacteria,4NUXV@976|Bacteroidetes,2FUJQ@200643|Bacteroidia,22YP0@171551|Porphyromonadaceae 976|Bacteroidetes J 50S ribosomal protein L30 rpmD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02907 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L30 PHJFGMMN_03284 411477.PARMER_03754 4.92e-94 275.0 COG0200@1|root,COG0200@2|Bacteria,4NNFQ@976|Bacteroidetes,2FSJF@200643|Bacteroidia,22XPR@171551|Porphyromonadaceae 976|Bacteroidetes J binds to the 23S rRNA rplO GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02876 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L27A PHJFGMMN_03285 411477.PARMER_03755 5.02e-311 848.0 COG0201@1|root,COG0201@2|Bacteria,4NEPU@976|Bacteroidetes,2FPIT@200643|Bacteroidia,22WS4@171551|Porphyromonadaceae 976|Bacteroidetes U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently secY - - ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5 - - SecY PHJFGMMN_03286 411477.PARMER_03756 2.33e-193 535.0 COG0024@1|root,COG0024@2|Bacteria,4NERQ@976|Bacteroidetes,2FM24@200643|Bacteroidia,22X5Z@171551|Porphyromonadaceae 976|Bacteroidetes E Methionine aminopeptidase map - 3.4.11.18 ko:K01265 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M24 PHJFGMMN_03287 411477.PARMER_03757 2.82e-44 143.0 COG0361@1|root,COG0361@2|Bacteria,4NS6S@976|Bacteroidetes,2FTSU@200643|Bacteroidia,22YEU@171551|Porphyromonadaceae 976|Bacteroidetes J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex infA GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - ko:K02518 - - - - ko00000,ko03012 - - - eIF-1a PHJFGMMN_03288 1235803.C825_01054 3.05e-18 75.5 COG0257@1|root,COG0257@2|Bacteria,4NXGE@976|Bacteroidetes,2FVEE@200643|Bacteroidia,22YYG@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bL36 family rpmJ - - ko:K02919 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L36 PHJFGMMN_03289 411477.PARMER_03758 5.07e-81 240.0 COG0099@1|root,COG0099@2|Bacteria,4NNGZ@976|Bacteroidetes,2FRYC@200643|Bacteroidia,22Y12@171551|Porphyromonadaceae 976|Bacteroidetes J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits rpsM GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02952 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S13 PHJFGMMN_03290 1122931.AUAE01000024_gene3739 1.01e-86 255.0 COG0100@1|root,COG0100@2|Bacteria,4NNHA@976|Bacteroidetes,2FRZD@200643|Bacteroidia,22XN9@171551|Porphyromonadaceae 976|Bacteroidetes J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome rpsK GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02948 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S11 PHJFGMMN_03291 411477.PARMER_03760 3.59e-140 396.0 COG0522@1|root,COG0522@2|Bacteria,4NEMZ@976|Bacteroidetes,2FMRC@200643|Bacteroidia,22WPW@171551|Porphyromonadaceae 976|Bacteroidetes J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit rpsD GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - ko:K02986 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S4,S4 PHJFGMMN_03292 411477.PARMER_03761 5.06e-234 644.0 COG0202@1|root,COG0202@2|Bacteria,4NE8W@976|Bacteroidetes,2FM4P@200643|Bacteroidia,22XAK@171551|Porphyromonadaceae 976|Bacteroidetes K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates rpoA GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - RNA_pol_A_CTD,RNA_pol_A_bac,RNA_pol_L PHJFGMMN_03293 411477.PARMER_03762 3.79e-87 259.0 COG0203@1|root,COG0203@2|Bacteria,4NNW0@976|Bacteroidetes,2FNPH@200643|Bacteroidia,22XWT@171551|Porphyromonadaceae 976|Bacteroidetes J 50S ribosomal protein L17 rplQ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02879 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L17 PHJFGMMN_03296 411477.PARMER_03764 2.14e-110 317.0 COG1705@1|root,COG1705@2|Bacteria 2|Bacteria NU amidase activity - - - ko:K02395 - - - - ko00000,ko02035 - - - Glucosaminidase,Rod-binding PHJFGMMN_03297 411477.PARMER_03765 1.66e-96 281.0 COG0776@1|root,COG0776@2|Bacteria,4NUQD@976|Bacteroidetes,2FS5I@200643|Bacteroidia,22YUX@171551|Porphyromonadaceae 976|Bacteroidetes L DNA-binding protein - - - - - - - - - - - - Bac_DNA_binding,HU-DNA_bdg PHJFGMMN_03298 1122931.AUAE01000010_gene4576 1.1e-16 74.3 298PA@1|root,2ZQYC@2|Bacteria,4P7SE@976|Bacteroidetes,2FVBS@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4248) - - - - - - - - - - - - DUF4248 PHJFGMMN_03299 411477.PARMER_03767 0.0 1523.0 COG0358@1|root,COG5545@1|root,COG0358@2|Bacteria,COG5545@2|Bacteria,4NETK@976|Bacteroidetes,2FR42@200643|Bacteroidia 976|Bacteroidetes L Protein of unknown function (DUF3987) - - - - - - - - - - - - DUF3987,PriCT_2,VirE_N PHJFGMMN_03301 411477.PARMER_03319 1.1e-20 107.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03302 411477.PARMER_03771 1.36e-211 585.0 COG5464@1|root,COG5464@2|Bacteria,4NJT2@976|Bacteroidetes,2FQ31@200643|Bacteroidia,230C8@171551|Porphyromonadaceae 976|Bacteroidetes S PD-(D/E)XK nuclease family transposase - - - - - - - - - - - - PDDEXK_2 PHJFGMMN_03303 411477.PARMER_03774 6.03e-307 837.0 COG0148@1|root,COG0148@2|Bacteria,4NF5M@976|Bacteroidetes,2FMNI@200643|Bacteroidia,22X7E@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis eno - 4.2.1.11 ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 M00001,M00002,M00003,M00346,M00394 R00658 RC00349 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 - - - Enolase_C,Enolase_N PHJFGMMN_03304 411477.PARMER_03775 0.0 1719.0 COG0474@1|root,COG0474@2|Bacteria,4NERM@976|Bacteroidetes,2FMEC@200643|Bacteroidia,22WNC@171551|Porphyromonadaceae 976|Bacteroidetes P Calcium-translocating P-type ATPase, PMCA-type - - 3.6.3.8 ko:K01537 - - - - ko00000,ko01000 3.A.3.2 - - Cation_ATPase,Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase,Hydrolase_3 PHJFGMMN_03305 411477.PARMER_03776 7.91e-115 329.0 2E5XB@1|root,330M9@2|Bacteria,4NW0P@976|Bacteroidetes,2FS56@200643|Bacteroidia,22YPM@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4251) - - - - - - - - - - - - DUF4251 PHJFGMMN_03306 411477.PARMER_03778 3.54e-235 647.0 COG1242@1|root,COG1242@2|Bacteria,4NGK6@976|Bacteroidetes,2FPR8@200643|Bacteroidia,22WQ2@171551|Porphyromonadaceae 976|Bacteroidetes S radical SAM protein - - - ko:K07139 - - - - ko00000 - - - Radical_SAM,Radical_SAM_C PHJFGMMN_03307 411477.PARMER_03777 0.0 1472.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NETS@976|Bacteroidetes,2FNBA@200643|Bacteroidia,22WW6@171551|Porphyromonadaceae 976|Bacteroidetes EU Peptidase, S9A B C family, catalytic domain protein dpp - 3.4.14.5 ko:K01278 ko04974,map04974 - - - ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 - - - DPPIV_N,Peptidase_S9 PHJFGMMN_03308 411477.PARMER_03779 2.73e-202 560.0 COG0320@1|root,COG0320@2|Bacteria,4NEB5@976|Bacteroidetes,2FNBV@200643|Bacteroidia,22W8Q@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives lipA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 ko:K03644 ko00785,ko01100,map00785,map01100 - R07767,R07768 RC01978 ko00000,ko00001,ko01000 - - - BPL_LplA_LipB,Lip_prot_lig_C,Radical_SAM PHJFGMMN_03309 411477.PARMER_03780 1.58e-261 717.0 COG1443@1|root,COG1443@2|Bacteria,4NMW4@976|Bacteroidetes,2FPR6@200643|Bacteroidia,22Y56@171551|Porphyromonadaceae 976|Bacteroidetes I Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - PHJFGMMN_03310 411477.PARMER_03781 3.36e-120 342.0 COG0622@1|root,COG0622@2|Bacteria,4NM4G@976|Bacteroidetes,2FSMW@200643|Bacteroidia,22XUV@171551|Porphyromonadaceae 976|Bacteroidetes S Phosphoesterase - - - ko:K07095 - - - - ko00000 - - - Metallophos_2 PHJFGMMN_03311 411477.PARMER_03782 0.0 1368.0 COG0855@1|root,COG0855@2|Bacteria,4NE3P@976|Bacteroidetes,2FM68@200643|Bacteroidia,22WZE@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) ppk - 2.7.4.1 ko:K00937 ko00190,ko03018,map00190,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - PP_kinase,PP_kinase_C,PP_kinase_N PHJFGMMN_03312 411477.PARMER_03783 1.82e-152 429.0 COG0457@1|root,COG0457@2|Bacteria,4PIXP@976|Bacteroidetes,2FXS6@200643|Bacteroidia 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - - PHJFGMMN_03313 411477.PARMER_03784 2.65e-247 678.0 COG0322@1|root,COG0322@2|Bacteria,4NGEV@976|Bacteroidetes,2FNVF@200643|Bacteroidia,22XZM@171551|Porphyromonadaceae 976|Bacteroidetes L Domain of unknown function (DUF4837) - - - - - - - - - - - - DUF4837 PHJFGMMN_03314 411477.PARMER_03785 0.0 1190.0 COG3591@1|root,COG3591@2|Bacteria,4NG2K@976|Bacteroidetes,2FRA2@200643|Bacteroidia,22Z8D@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the peptidase S1B family - - 3.4.21.50 ko:K01337 - - - - ko00000,ko01000,ko01002 - - - Trypsin_2 PHJFGMMN_03317 411477.PARMER_03788 0.0 951.0 COG0144@1|root,COG3270@1|root,COG0144@2|Bacteria,COG3270@2|Bacteria,4NEV7@976|Bacteroidetes,2FKZX@200643|Bacteroidia,22WT9@171551|Porphyromonadaceae 976|Bacteroidetes J NOL1 NOP2 sun family rsmF - - - - - - - - - - - Methyltr_RsmB-F,Methyltr_RsmF_N,Methyltranf_PUA PHJFGMMN_03318 999419.HMPREF1077_02284 3.81e-160 449.0 COG0313@1|root,COG0313@2|Bacteria,4NDXE@976|Bacteroidetes,2FN1A@200643|Bacteroidia,22WFR@171551|Porphyromonadaceae 976|Bacteroidetes H Methyltransferase rsmI_1 - 2.1.1.198 ko:K07056 - - - - ko00000,ko01000,ko03009 - - - TP_methylase PHJFGMMN_03319 411477.PARMER_03791 2.02e-107 312.0 COG0110@1|root,COG0110@2|Bacteria,4NENC@976|Bacteroidetes,2FP5Y@200643|Bacteroidia,22WU1@171551|Porphyromonadaceae 976|Bacteroidetes S Bacterial transferase hexapeptide repeat - - 2.3.1.201 ko:K13018 ko00520,map00520 - R10100 RC00004,RC00166 ko00000,ko00001,ko01000,ko01005 - - - Hexapep,Hexapep_2 PHJFGMMN_03320 411477.PARMER_03792 1.51e-201 558.0 COG0157@1|root,COG0157@2|Bacteria,4NDXF@976|Bacteroidetes,2FMJM@200643|Bacteroidia,22X4A@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the NadC ModD family nadC - 2.4.2.19 ko:K00767 ko00760,ko01100,map00760,map01100 M00115 R03348 RC02877 ko00000,ko00001,ko00002,ko01000 - - - QRPTase_C,QRPTase_N PHJFGMMN_03321 411477.PARMER_03793 1.64e-78 234.0 2E4AG@1|root,32Z66@2|Bacteria,4NUXA@976|Bacteroidetes,2FSMC@200643|Bacteroidia,22YXI@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4783) - - - - - - - - - - - - DUF4783 PHJFGMMN_03322 411477.PARMER_03794 1.28e-107 310.0 COG1576@1|root,COG1576@2|Bacteria,4NMFP@976|Bacteroidetes,2FN6G@200643|Bacteroidia,22XQY@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA rlmH - 2.1.1.177 ko:K00783 - - - - ko00000,ko01000,ko03009 - - - SPOUT_MTase PHJFGMMN_03323 411477.PARMER_03795 3.45e-258 707.0 COG0082@1|root,COG0082@2|Bacteria,4NDXJ@976|Bacteroidetes,2FNGP@200643|Bacteroidia,22VVQ@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system aroC GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R01714 RC00586 ko00000,ko00001,ko00002,ko01000 - - - Chorismate_synt PHJFGMMN_03324 411477.PARMER_03796 3.15e-116 335.0 COG1047@1|root,COG1047@2|Bacteria,4NM29@976|Bacteroidetes,2FM08@200643|Bacteroidia,22XMB@171551|Porphyromonadaceae 976|Bacteroidetes O Peptidyl-prolyl cis-trans isomerase slyD - 5.2.1.8 ko:K03775 - - - - ko00000,ko01000,ko03110 - - - FKBP_C PHJFGMMN_03325 411477.PARMER_03797 1.74e-314 855.0 COG1168@1|root,COG1168@2|Bacteria,4NETH@976|Bacteroidetes,2FMIZ@200643|Bacteroidia,22WVZ@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase class I and II patB - 4.4.1.8 ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 - R00782,R01286,R02408,R04941 RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 PHJFGMMN_03326 999419.HMPREF1077_02292 0.0 1191.0 COG0129@1|root,COG0129@2|Bacteria,4NFHP@976|Bacteroidetes,2FMCC@200643|Bacteroidia,22WXM@171551|Porphyromonadaceae 976|Bacteroidetes EG Belongs to the IlvD Edd family ilvD - 4.2.1.9 ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R01209,R04441,R05070 RC00468,RC01714 ko00000,ko00001,ko00002,ko01000 - - - ILVD_EDD PHJFGMMN_03327 411477.PARMER_03799 0.0 1117.0 COG0028@1|root,COG0028@2|Bacteria,4NENG@976|Bacteroidetes,2FMMH@200643|Bacteroidia,22WKA@171551|Porphyromonadaceae 976|Bacteroidetes H Acetolactate synthase, large subunit ilvB - 2.2.1.6 ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N PHJFGMMN_03328 411477.PARMER_03800 4.09e-119 341.0 COG0440@1|root,COG0440@2|Bacteria,4NIDK@976|Bacteroidetes,2FNQ4@200643|Bacteroidia,22XTP@171551|Porphyromonadaceae 976|Bacteroidetes E synthase small subunit ilvN - 2.2.1.6 ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 - - - ACT,ACT_5,ALS_ss_C PHJFGMMN_03329 411477.PARMER_03801 2.88e-182 506.0 COG3884@1|root,COG3884@2|Bacteria,4NMMY@976|Bacteroidetes,2FQ43@200643|Bacteroidia,22Y3B@171551|Porphyromonadaceae 976|Bacteroidetes I Acyl-ACP thioesterase - - 3.1.2.21 ko:K01071 ko00061,ko01100,map00061,map01100 - R04014,R08157,R08158 RC00014,RC00039 ko00000,ko00001,ko01000,ko01004 - - - Acyl-ACP_TE PHJFGMMN_03330 411477.PARMER_03802 2.13e-255 699.0 COG0059@1|root,COG0059@2|Bacteria,4NFYV@976|Bacteroidetes,2FN0U@200643|Bacteroidia,22W57@171551|Porphyromonadaceae 976|Bacteroidetes E Ketol-acid reductoisomerase ilvC - 1.1.1.86 ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R03051,R04439,R04440,R05068,R05069,R05071 RC00726,RC00836,RC00837,RC01726 ko00000,ko00001,ko00002,ko01000 - - - IlvC,IlvN PHJFGMMN_03331 411477.PARMER_03804 2.78e-292 796.0 COG1409@1|root,COG1409@2|Bacteria,4NG8Q@976|Bacteroidetes,2G35U@200643|Bacteroidia,22ZKG@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase superfamily domain - - - - - - - - - - - - Metallophos,Pur_ac_phosph_N PHJFGMMN_03332 411477.PARMER_03806 0.0 969.0 COG0119@1|root,COG0119@2|Bacteria,4NEIT@976|Bacteroidetes,2FNX8@200643|Bacteroidia,22W7V@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) leuA - 2.3.3.13 ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 M00432 R01213 RC00004,RC00470,RC02754 br01601,ko00000,ko00001,ko00002,ko01000 - - - HMGL-like,LeuA_dimer PHJFGMMN_03333 411477.PARMER_03807 0.0 943.0 COG0065@1|root,COG0065@2|Bacteria,4NG7E@976|Bacteroidetes,2FMCX@200643|Bacteroidia,22WNV@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate leuC - 4.2.1.33,4.2.1.35 ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R08620,R08624,R08628,R08634,R08641,R08645,R10170 RC00497,RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase PHJFGMMN_03334 411477.PARMER_03808 4.58e-140 395.0 COG0066@1|root,COG0066@2|Bacteria,4NDVY@976|Bacteroidetes,2FNIN@200643|Bacteroidia,22W31@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate leuD - 4.2.1.33,4.2.1.35 ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R10170 RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase_C PHJFGMMN_03335 411477.PARMER_03809 0.0 991.0 COG0119@1|root,COG0119@2|Bacteria,4NF3N@976|Bacteroidetes,2FKYJ@200643|Bacteroidia,22WYH@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the alpha-IPM synthase homocitrate synthase family leuA_1 - 2.3.1.182 ko:K09011 ko00290,ko00660,ko01100,ko01210,ko01230,map00290,map00660,map01100,map01210,map01230 M00535 R07399 RC00004,RC01205 br01601,ko00000,ko00001,ko00002,ko01000 - - - HMGL-like,LeuA_dimer PHJFGMMN_03336 411477.PARMER_03810 6.21e-105 303.0 COG1803@1|root,COG1803@2|Bacteria,4NQJ9@976|Bacteroidetes,2FPT5@200643|Bacteroidia,22XP7@171551|Porphyromonadaceae 976|Bacteroidetes G methylglyoxal synthase mgsA - 4.2.3.3 ko:K01734 ko00640,ko01120,map00640,map01120 - R01016 RC00424 ko00000,ko00001,ko01000 - - - MGS PHJFGMMN_03337 411477.PARMER_03811 1.24e-261 716.0 COG0473@1|root,COG0473@2|Bacteria,4NEBE@976|Bacteroidetes,2FNJ0@200643|Bacteroidia,22WT3@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate leuB GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R00994,R04426,R10052 RC00084,RC00417,RC03036 br01601,ko00000,ko00001,ko00002,ko01000 - - - Iso_dh PHJFGMMN_03338 411477.PARMER_03812 4.17e-113 333.0 COG0457@1|root,COG0457@2|Bacteria,4NPDH@976|Bacteroidetes,2FMNE@200643|Bacteroidia,22Y5K@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_16,TPR_2,TPR_6,TPR_7,TPR_8 PHJFGMMN_03340 411477.PARMER_03813 7.39e-190 528.0 COG0668@1|root,COG0668@2|Bacteria,4NEPW@976|Bacteroidetes,2G3EE@200643|Bacteroidia,22XH6@171551|Porphyromonadaceae 976|Bacteroidetes M mechanosensitive ion channel - - - ko:K03442 - - - - ko00000,ko02000 1.A.23.2 - - MS_channel,TM_helix PHJFGMMN_03342 411477.PARMER_03816 5.24e-193 536.0 2BUJT@1|root,32PW9@2|Bacteria,4NS5Q@976|Bacteroidetes,2FMA2@200643|Bacteroidia,22Y8M@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03343 411477.PARMER_03817 0.0 943.0 COG0617@1|root,COG0617@2|Bacteria,4NF1S@976|Bacteroidetes,2FNMZ@200643|Bacteroidia,22X29@171551|Porphyromonadaceae 976|Bacteroidetes J tRNA nucleotidyltransferase cca - 2.7.7.19,2.7.7.72 ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 - R09382,R09383,R09384,R09386 RC00078 ko00000,ko00001,ko01000,ko03016,ko03019 - - - HD,PolyA_pol,PolyA_pol_RNAbd PHJFGMMN_03344 411477.PARMER_03818 3.25e-106 305.0 2DWV0@1|root,3420H@2|Bacteria,4P4G9@976|Bacteroidetes,2FT1Z@200643|Bacteroidia 976|Bacteroidetes S COG NOG19145 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_03345 411477.PARMER_03821 7.61e-144 405.0 COG0110@1|root,COG0110@2|Bacteria,4NH27@976|Bacteroidetes,2FQA3@200643|Bacteroidia,22XJT@171551|Porphyromonadaceae 976|Bacteroidetes S Hexapeptide repeat of succinyl-transferase - - 2.3.1.79 ko:K00661 - - - - ko00000,ko01000 - - - Hexapep,Hexapep_2 PHJFGMMN_03346 411477.PARMER_03822 1.16e-207 573.0 COG2207@1|root,COG2207@2|Bacteria,4NGWC@976|Bacteroidetes,2FNH8@200643|Bacteroidia,22XKU@171551|Porphyromonadaceae 976|Bacteroidetes K AraC family transcriptional regulator - - - - - - - - - - - - AraC_binding,HTH_18 PHJFGMMN_03347 411477.PARMER_03823 0.0 1430.0 COG0317@1|root,COG0317@2|Bacteria,4NESY@976|Bacteroidetes,2FKYN@200643|Bacteroidia,22WCI@171551|Porphyromonadaceae 976|Bacteroidetes KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance relA - 2.7.6.5,3.1.7.2 ko:K00951,ko:K01139 ko00230,map00230 - R00336,R00429 RC00002,RC00078 ko00000,ko00001,ko01000,ko03009 - - - ACT_4,HD_4,RelA_SpoT,TGS PHJFGMMN_03348 411477.PARMER_03824 0.0 1013.0 COG3172@1|root,COG3172@2|Bacteria,4NEQF@976|Bacteroidetes,2FN8P@200643|Bacteroidia,22WZJ@171551|Porphyromonadaceae 976|Bacteroidetes H NAD metabolism ATPase kinase - - - - - - - - - - - - DUF4301 PHJFGMMN_03349 411477.PARMER_03825 1.35e-73 221.0 COG0335@1|root,COG0335@2|Bacteria,4NNPW@976|Bacteroidetes,2FSHU@200643|Bacteroidia,22Y1V@171551|Porphyromonadaceae 976|Bacteroidetes J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site rplS GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02884 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L19 PHJFGMMN_03350 411477.PARMER_03826 3.03e-316 858.0 COG1073@1|root,COG1073@2|Bacteria,4NG6A@976|Bacteroidetes,2FPAE@200643|Bacteroidia,22YCE@171551|Porphyromonadaceae 976|Bacteroidetes S alpha beta - - - - - - - - - - - - - PHJFGMMN_03351 411477.PARMER_03827 2.42e-193 535.0 28J3W@1|root,2Z900@2|Bacteria,4NG4R@976|Bacteroidetes,2FY4J@200643|Bacteroidia 976|Bacteroidetes S NIPSNAP - - - - - - - - - - - - NIPSNAP PHJFGMMN_03352 411477.PARMER_03828 0.0 1969.0 COG1472@1|root,COG1680@1|root,COG1472@2|Bacteria,COG1680@2|Bacteria,4NET8@976|Bacteroidetes,2FN0V@200643|Bacteroidia,22WIJ@171551|Porphyromonadaceae 976|Bacteroidetes G hydrolase, family 3 nagA - - - - - - - - - - - Beta-lactamase,Glyco_hydro_3,Glyco_hydro_3_C PHJFGMMN_03353 411477.PARMER_03829 9e-255 697.0 COG0079@1|root,COG0079@2|Bacteria,4NH43@976|Bacteroidetes,2FMAS@200643|Bacteroidia,22WAZ@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase - - 4.1.1.81 ko:K04720 ko00860,map00860 - R06530 RC00517 ko00000,ko00001,ko01000 - - - Aminotran_1_2 PHJFGMMN_03354 411477.PARMER_03832 2.75e-305 832.0 COG4277@1|root,COG4277@2|Bacteria,4NEI2@976|Bacteroidetes,2FNIC@200643|Bacteroidia,22WK1@171551|Porphyromonadaceae 976|Bacteroidetes S Radical SAM - - - - - - - - - - - - HHH_3,Radical_SAM PHJFGMMN_03355 411477.PARMER_03833 2.32e-185 514.0 COG1573@1|root,COG1573@2|Bacteria,4NECP@976|Bacteroidetes,2FMJ6@200643|Bacteroidia,22W06@171551|Porphyromonadaceae 976|Bacteroidetes L DNA metabolism protein - - - - - - - - - - - - DUF4130 PHJFGMMN_03356 411477.PARMER_03834 8.43e-148 416.0 COG3187@1|root,COG3187@2|Bacteria,4NWRF@976|Bacteroidetes,2FNPG@200643|Bacteroidia,22XMT@171551|Porphyromonadaceae 976|Bacteroidetes O lipoprotein NlpE involved in copper resistance - - - - - - - - - - - - - PHJFGMMN_03357 411477.PARMER_03835 2.93e-107 309.0 COG2030@1|root,COG2030@2|Bacteria,4NNHH@976|Bacteroidetes,2FP51@200643|Bacteroidia,22XZN@171551|Porphyromonadaceae 976|Bacteroidetes I MaoC like domain nodN - - - - - - - - - - - MaoC_dehydratas PHJFGMMN_03358 411477.PARMER_03836 0.0 2325.0 2C5U1@1|root,2Z80K@2|Bacteria,4NG4G@976|Bacteroidetes,2FRC3@200643|Bacteroidia,22Y97@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - DUF748 PHJFGMMN_03359 411477.PARMER_03837 2.48e-61 187.0 COG2388@1|root,COG2388@2|Bacteria,4NVD1@976|Bacteroidetes,2FU4P@200643|Bacteroidia,22YSA@171551|Porphyromonadaceae 976|Bacteroidetes S GCN5-related N-acetyl-transferase - - - ko:K06975 - - - - ko00000 - - - Acetyltransf_CG PHJFGMMN_03360 411477.PARMER_03838 1.79e-108 317.0 COG1357@1|root,COG1357@2|Bacteria,4NQ3B@976|Bacteroidetes,2FPSW@200643|Bacteroidia,22YNV@171551|Porphyromonadaceae 976|Bacteroidetes S Pentapeptide repeats (8 copies) - - - - - - - - - - - - Pentapeptide,Pentapeptide_4 PHJFGMMN_03363 411477.PARMER_03842 5.22e-75 224.0 2F4P8@1|root,33XCF@2|Bacteria,4P3GA@976|Bacteroidetes,2FT1A@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03364 411477.PARMER_03843 2.73e-304 828.0 COG4974@1|root,COG4974@2|Bacteria,4NX3Q@976|Bacteroidetes,2G3F8@200643|Bacteroidia 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_03365 411477.PARMER_03845 2.25e-86 254.0 2EZ4N@1|root,33SAU@2|Bacteria,4P18S@976|Bacteroidetes,2FS99@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 9.46 - - - - - - - - - - - - - PHJFGMMN_03366 411477.PARMER_03117 3.75e-63 193.0 2DVGY@1|root,33VUH@2|Bacteria,4P32R@976|Bacteroidetes,2FTE0@200643|Bacteroidia,230EX@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03367 435590.BVU_1590 1.74e-273 748.0 COG4227@1|root,COG4227@2|Bacteria,4NKX0@976|Bacteroidetes,2FM87@200643|Bacteroidia,4AKWR@815|Bacteroidaceae 976|Bacteroidetes L Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_03368 435591.BDI_3864 1.95e-218 602.0 2C4PB@1|root,33PQ8@2|Bacteria,4P0MV@976|Bacteroidetes,2FPGN@200643|Bacteroidia,22ZP0@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_03369 1121098.HMPREF1534_03013 2.48e-52 164.0 2F8ID@1|root,340X6@2|Bacteria,4P4QA@976|Bacteroidetes,2FT2D@200643|Bacteroidia,4ARFU@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_03370 411477.PARMER_01098 1.96e-119 341.0 2C2RP@1|root,33PBC@2|Bacteria,4P0NX@976|Bacteroidetes,2FQ0X@200643|Bacteroidia,22ZVV@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4313) - - - - - - - - - - - - DUF4313 PHJFGMMN_03371 1122971.BAME01000067_gene4853 2.22e-68 207.0 2BX68@1|root,33U1F@2|Bacteria,4P2HN@976|Bacteroidetes,2FSUH@200643|Bacteroidia,230A5@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03372 1122971.BAME01000067_gene4854 1.28e-41 136.0 2EFBI@1|root,3394G@2|Bacteria,4NVY4@976|Bacteroidetes,2FQJ3@200643|Bacteroidia,230WT@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_03373 435590.BVU_1584 5.41e-254 695.0 COG2214@1|root,COG2214@2|Bacteria,4NZST@976|Bacteroidetes,2FQX2@200643|Bacteroidia,4AKPC@815|Bacteroidaceae 976|Bacteroidetes O DnaJ molecular chaperone homology domain - - - - - - - - - - - - - PHJFGMMN_03374 411477.PARMER_03064 6.46e-63 192.0 2DUQY@1|root,33RTR@2|Bacteria,4P1JQ@976|Bacteroidetes,2FMQ1@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03375 411477.PARMER_03065 4.03e-186 518.0 COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FNAR@200643|Bacteroidia,22WBH@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain nagZ2 - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - CHB_HEX_C_1,F5_F8_type_C,Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b PHJFGMMN_03376 411477.PARMER_03067 4.83e-295 805.0 COG1106@1|root,COG1106@2|Bacteria,4NE5J@976|Bacteroidetes,2FN6S@200643|Bacteroidia,22X4S@171551|Porphyromonadaceae 976|Bacteroidetes S AAA ATPase domain - - - ko:K06926 - - - - ko00000 - - - AAA_21 PHJFGMMN_03377 411477.PARMER_03068 9.03e-126 358.0 2DKX2@1|root,30PJE@2|Bacteria,4NP4Z@976|Bacteroidetes,2FRNN@200643|Bacteroidia,22XVY@171551|Porphyromonadaceae 976|Bacteroidetes S RloB-like protein - - - - - - - - - - - - RloB PHJFGMMN_03378 411477.PARMER_03069 2.43e-24 94.7 2F8RC@1|root,3413J@2|Bacteria,4P435@976|Bacteroidetes,2FT9E@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03379 411477.PARMER_03070 1.11e-49 157.0 COG0358@1|root,COG0358@2|Bacteria,4P4RK@976|Bacteroidetes,2FU3E@200643|Bacteroidia 976|Bacteroidetes L COG NOG22337 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_03380 411477.PARMER_03093 5.36e-138 390.0 COG5340@1|root,COG5340@2|Bacteria,4NSQC@976|Bacteroidetes,2FQGU@200643|Bacteroidia 976|Bacteroidetes K Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - AbiEi_4 PHJFGMMN_03381 411477.PARMER_03074 2.13e-40 133.0 2FEA1@1|root,3469S@2|Bacteria,4P6FZ@976|Bacteroidetes,2FYWR@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03382 411477.PARMER_03076 2.29e-222 612.0 COG2755@1|root,COG2755@2|Bacteria,4NEAZ@976|Bacteroidetes,2FM11@200643|Bacteroidia 976|Bacteroidetes E COG NOG09493 non supervised orthologous group - - - - - - - - - - - - GxDLY,Lipase_GDSL_2,Lipase_GDSL_3 PHJFGMMN_03383 411477.PARMER_03077 1.27e-91 274.0 COG2207@1|root,COG2207@2|Bacteria,4NMFW@976|Bacteroidetes,2G07E@200643|Bacteroidia,23248@171551|Porphyromonadaceae 976|Bacteroidetes K AraC-like ligand binding domain - - - - - - - - - - - - AraC_binding,HTH_18,HTH_AraC PHJFGMMN_03384 411477.PARMER_03077 7.26e-118 343.0 COG2207@1|root,COG2207@2|Bacteria,4NMFW@976|Bacteroidetes,2G07E@200643|Bacteroidia,23248@171551|Porphyromonadaceae 976|Bacteroidetes K AraC-like ligand binding domain - - - - - - - - - - - - AraC_binding,HTH_18,HTH_AraC PHJFGMMN_03385 411477.PARMER_03078 0.0 1080.0 COG1397@1|root,COG1397@2|Bacteria,4NG36@976|Bacteroidetes,2FNB7@200643|Bacteroidia,22X71@171551|Porphyromonadaceae 976|Bacteroidetes O ADP-ribosylglycohydrolase - - - - - - - - - - - - ADP_ribosyl_GH PHJFGMMN_03386 411477.PARMER_03079 0.0 2129.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_03387 411477.PARMER_03080 0.0 1357.0 COG0436@1|root,COG0436@2|Bacteria,4PMV0@976|Bacteroidetes,2G0HC@200643|Bacteroidia 976|Bacteroidetes E Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_03388 411477.PARMER_03081 0.0 1209.0 28KYZ@1|root,2ZAEB@2|Bacteria,4NHBZ@976|Bacteroidetes,2FP4X@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - PHJFGMMN_03389 411477.PARMER_03082 0.0 1023.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 PHJFGMMN_03391 411477.PARMER_03085 0.0 1240.0 COG0613@1|root,COG3537@1|root,COG0613@2|Bacteria,COG3537@2|Bacteria,4NHZ5@976|Bacteroidetes,2FQW5@200643|Bacteroidia,22Y9R@171551|Porphyromonadaceae 976|Bacteroidetes G DNA polymerase alpha chain like domain - - 3.1.3.97 ko:K07053 - - R00188,R11188 RC00078 ko00000,ko01000 - - - DUF5001,PHP PHJFGMMN_03392 411477.PARMER_03086 7.18e-54 170.0 2DW68@1|root,33YQ6@2|Bacteria,4PMV1@976|Bacteroidetes,2G0HD@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03395 411477.PARMER_03089 3.86e-165 461.0 COG3637@1|root,COG3637@2|Bacteria,4P1BM@976|Bacteroidetes,2FQBA@200643|Bacteroidia 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl_2 PHJFGMMN_03396 411477.PARMER_03093 7.74e-138 390.0 COG5340@1|root,COG5340@2|Bacteria,4NSQC@976|Bacteroidetes,2FQGU@200643|Bacteroidia 976|Bacteroidetes K Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - AbiEi_4 PHJFGMMN_03397 411477.PARMER_03094 6e-211 582.0 COG2253@1|root,COG2253@2|Bacteria,4NPQZ@976|Bacteroidetes,2FNRX@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score - - - - - - - - - - - - AbiEii PHJFGMMN_03398 411477.PARMER_03096 0.0 1272.0 COG1154@1|root,COG1154@2|Bacteria,4NDY5@976|Bacteroidetes,2FM50@200643|Bacteroidia,22WDJ@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) dxs - 2.2.1.7 ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 M00096 R05636 RC00032 ko00000,ko00001,ko00002,ko01000 - - - DXP_synthase_N,E1_dh,Transket_pyr,Transketolase_C PHJFGMMN_03399 411477.PARMER_03097 0.0 872.0 COG0569@1|root,COG0569@2|Bacteria,4NE31@976|Bacteroidetes,2FP1F@200643|Bacteroidia,22VXG@171551|Porphyromonadaceae 976|Bacteroidetes P Potassium transporter trkA - - ko:K03499 - - - - ko00000,ko02000 2.A.38.1,2.A.38.4 - - TrkA_C,TrkA_N PHJFGMMN_03400 411477.PARMER_03098 0.0 972.0 COG0168@1|root,COG0168@2|Bacteria,4NGMF@976|Bacteroidetes,2FNQZ@200643|Bacteroidia,22W5T@171551|Porphyromonadaceae 976|Bacteroidetes P Potassium transporter trkH - - ko:K03498 - - - - ko00000,ko02000 2.A.38.1,2.A.38.4 - - TrkH PHJFGMMN_03401 411477.PARMER_03099 1.6e-116 336.0 COG0632@1|root,COG0632@2|Bacteria,4NF4E@976|Bacteroidetes,2FNA8@200643|Bacteroidia,22Y0A@171551|Porphyromonadaceae 976|Bacteroidetes L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB ruvA - 3.6.4.12 ko:K03550 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - HHH_5,RuvA_C,RuvA_N PHJFGMMN_03402 411477.PARMER_03100 0.0 4878.0 COG4797@1|root,COG4797@2|Bacteria,4PKQS@976|Bacteroidetes,2FP69@200643|Bacteroidia,2322Y@171551|Porphyromonadaceae 976|Bacteroidetes S Motility related/secretion protein sprA - - - - - - - - - - - SprA_N PHJFGMMN_03403 411477.PARMER_03103 1.11e-166 464.0 COG0692@1|root,COG0692@2|Bacteria,4NE2B@976|Bacteroidetes,2FM57@200643|Bacteroidia,22WGA@171551|Porphyromonadaceae 976|Bacteroidetes L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine ung - 3.2.2.27 ko:K03648 ko03410,ko05340,map03410,map05340 - - - ko00000,ko00001,ko01000,ko03400 - - - UDG PHJFGMMN_03404 411477.PARMER_03104 1.38e-274 750.0 COG1663@1|root,COG1663@2|Bacteria,4NE2I@976|Bacteroidetes,2FN2X@200643|Bacteroidia,22WXK@171551|Porphyromonadaceae 976|Bacteroidetes F Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) lpxK - 2.7.1.130 ko:K00912 ko00540,ko01100,map00540,map01100 M00060 R04657 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01005 - - - LpxK PHJFGMMN_03405 411477.PARMER_03105 6.52e-248 680.0 COG0611@1|root,COG0611@2|Bacteria,4NDUT@976|Bacteroidetes,2FN7K@200643|Bacteroidia,22VV5@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 thiL - 2.7.4.16 ko:K00946 ko00730,ko01100,map00730,map01100 M00127 R00617 RC00002 ko00000,ko00001,ko00002,ko01000 - - - AIRS,AIRS_C PHJFGMMN_03407 411477.PARMER_01165 1.45e-299 816.0 COG0582@1|root,COG0582@2|Bacteria,4NDZJ@976|Bacteroidetes,2FM4Q@200643|Bacteroidia,2321Y@171551|Porphyromonadaceae 976|Bacteroidetes L Arm DNA-binding domain - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_03408 411477.PARMER_01164 4.73e-85 250.0 COG3943@1|root,COG3943@2|Bacteria,4NWZ9@976|Bacteroidetes,2FSGW@200643|Bacteroidia,22YZ4@171551|Porphyromonadaceae 976|Bacteroidetes S COG3943, virulence protein - - - - - - - - - - - - - PHJFGMMN_03409 411477.PARMER_01161 1.44e-66 202.0 2DQYP@1|root,339EX@2|Bacteria,4NWWZ@976|Bacteroidetes,2FT6P@200643|Bacteroidia,22YNR@171551|Porphyromonadaceae 976|Bacteroidetes S Helix-turn-helix domain - - - - - - - - - - - - HTH_17 PHJFGMMN_03410 411477.PARMER_01160 3.2e-69 209.0 COG0789@1|root,COG0789@2|Bacteria,4NSUY@976|Bacteroidetes,2FT8V@200643|Bacteroidia,22Y9B@171551|Porphyromonadaceae 976|Bacteroidetes K COG NOG34759 non supervised orthologous group - - - - - - - - - - - - HTH_17 PHJFGMMN_03411 411477.PARMER_01157 5.67e-96 279.0 2DUA4@1|root,33PKD@2|Bacteria,4P0ZB@976|Bacteroidetes,2G2G1@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_03412 411477.PARMER_01156 1.64e-199 552.0 COG2207@1|root,COG2207@2|Bacteria,4NEVV@976|Bacteroidetes,2G33G@200643|Bacteroidia,231ZV@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - HTH_18 PHJFGMMN_03413 411477.PARMER_01155 3.89e-151 424.0 COG4845@1|root,COG4845@2|Bacteria,4NFUQ@976|Bacteroidetes,2FNP1@200643|Bacteroidia 976|Bacteroidetes V Chloramphenicol O-acetyltransferase - - 2.3.1.28 ko:K19271 - - - - br01600,ko00000,ko01000,ko01504 - - - CAT PHJFGMMN_03414 411477.PARMER_01154 9.34e-317 863.0 COG0534@1|root,COG0534@2|Bacteria,4NFIR@976|Bacteroidetes,2FMSA@200643|Bacteroidia,22X9K@171551|Porphyromonadaceae 976|Bacteroidetes V COG0534 Na -driven multidrug efflux pump - - - - - - - - - - - - MatE PHJFGMMN_03415 411477.PARMER_01153 2.96e-156 437.0 COG0110@1|root,COG0110@2|Bacteria,4NHX5@976|Bacteroidetes,2FQ64@200643|Bacteroidia,22Y8Z@171551|Porphyromonadaceae 976|Bacteroidetes S Bacterial transferase hexapeptide (six repeats) - - - ko:K18234 - - - - ko00000,ko01000,ko01504 - - - Hexapep PHJFGMMN_03416 411477.PARMER_01152 0.0 1474.0 COG0642@1|root,COG0745@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,4NFEF@976|Bacteroidetes,2FNF0@200643|Bacteroidia,22WEZ@171551|Porphyromonadaceae 976|Bacteroidetes T ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - - - - - - - - - - HATPase_c,HisKA,Response_reg PHJFGMMN_03417 411477.PARMER_01151 0.0 867.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMCJ@200643|Bacteroidia,22WTG@171551|Porphyromonadaceae 976|Bacteroidetes T Bacterial regulatory protein, Fis family zraR - - ko:K07713 ko02020,map02020 M00499 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat PHJFGMMN_03418 1121439.dsat_2044 5.49e-22 85.9 2EJXF@1|root,33DN2@2|Bacteria,1NMYF@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - PHJFGMMN_03420 411477.PARMER_01148 1.28e-296 809.0 COG3328@1|root,COG3328@2|Bacteria,4NFQS@976|Bacteroidetes,2FM5A@200643|Bacteroidia,22YJ0@171551|Porphyromonadaceae 976|Bacteroidetes L COG COG3328 Transposase and inactivated derivatives - - - - - - - - - - - - Transposase_mut PHJFGMMN_03422 411477.PARMER_01147 2.41e-314 857.0 COG1106@1|root,COG1106@2|Bacteria,4NS62@976|Bacteroidetes,2G381@200643|Bacteroidia,2320M@171551|Porphyromonadaceae 976|Bacteroidetes S AAA domain, putative AbiEii toxin, Type IV TA system - - - - - - - - - - - - AAA_21 PHJFGMMN_03423 411477.PARMER_01146 9.96e-135 382.0 COG3637@1|root,COG3637@2|Bacteria,4NSVH@976|Bacteroidetes,2FS20@200643|Bacteroidia,22YH7@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl,OMP_b-brl_2 PHJFGMMN_03424 411477.PARMER_01145 0.0 1624.0 COG1198@1|root,COG1198@2|Bacteria,4NFHB@976|Bacteroidetes,2FN6Z@200643|Bacteroidia,22WDT@171551|Porphyromonadaceae 976|Bacteroidetes L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA priA - - ko:K04066 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,ResIII PHJFGMMN_03425 411477.PARMER_01144 3.46e-120 343.0 COG0394@1|root,COG0394@2|Bacteria,4NNQZ@976|Bacteroidetes,2FM80@200643|Bacteroidia,22Y5T@171551|Porphyromonadaceae 976|Bacteroidetes T Belongs to the low molecular weight phosphotyrosine protein phosphatase family ptpA - 3.1.3.48 ko:K01104 - - - - ko00000,ko01000 - - - LMWPc PHJFGMMN_03426 411477.PARMER_01142 0.0 1315.0 COG1480@1|root,COG1480@2|Bacteria,4NEHV@976|Bacteroidetes,2FNT9@200643|Bacteroidia,22WDA@171551|Porphyromonadaceae 976|Bacteroidetes S 7TM receptor with intracellular HD hydrolase - - - ko:K07037 - - - - ko00000 - - - 7TM-7TMR_HD,7TMR-HDED,HD PHJFGMMN_03427 411477.PARMER_01141 0.0 1038.0 COG0008@1|root,COG0008@2|Bacteria,4NEED@976|Bacteroidetes,2FN2D@200643|Bacteroidia,22WXH@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) gltX - 6.1.1.17 ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 M00121,M00359,M00360 R05578 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 - - - tRNA-synt_1c PHJFGMMN_03428 411477.PARMER_01140 2.07e-302 823.0 COG1519@1|root,COG1519@2|Bacteria,4NESA@976|Bacteroidetes,2FPNI@200643|Bacteroidia,22XA0@171551|Porphyromonadaceae 976|Bacteroidetes M transferase waaA - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 ko:K02527 ko00540,ko01100,map00540,map01100 M00060,M00080 R04658,R05074,R09763 RC00009,RC00077,RC00247 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT30 - Glycos_transf_N PHJFGMMN_03429 411477.PARMER_01139 0.0 1629.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FQUS@200643|Bacteroidia,22XES@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 PHJFGMMN_03431 411477.PARMER_01136 0.0 2009.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia,22XBF@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_03432 411477.PARMER_01135 0.0 1271.0 COG0436@1|root,COG0436@2|Bacteria,4NEN3@976|Bacteroidetes,2FNFW@200643|Bacteroidia,22ZQW@171551|Porphyromonadaceae 976|Bacteroidetes E Starch-binding associating with outer membrane - - - - - - - - - - - - SusD-like_3,SusD_RagB PHJFGMMN_03433 411477.PARMER_01134 0.0 947.0 COG3579@1|root,COG3579@2|Bacteria,4NJ3J@976|Bacteroidetes,2FMZY@200643|Bacteroidia,22WXZ@171551|Porphyromonadaceae 976|Bacteroidetes M aminopeptidase pepC - 3.4.22.40 ko:K01372 - - - - ko00000,ko01000,ko01002 - - - Peptidase_C1_2 PHJFGMMN_03434 411477.PARMER_01133 4.33e-62 190.0 COG3877@1|root,COG3877@2|Bacteria,4NVHG@976|Bacteroidetes,2FT1Y@200643|Bacteroidia,22YRD@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF2089) - - - - - - - - - - - - DUF2089 PHJFGMMN_03435 411477.PARMER_01132 2.65e-144 406.0 2C6HF@1|root,32WTS@2|Bacteria,4NSUD@976|Bacteroidetes,2FRF4@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03436 411477.PARMER_01131 3.3e-158 443.0 COG0546@1|root,COG0546@2|Bacteria,4NMPP@976|Bacteroidetes,2FS95@200643|Bacteroidia,22XY9@171551|Porphyromonadaceae 976|Bacteroidetes S HAD-hyrolase-like - - 3.1.3.18 ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 - R01334 RC00017 ko00000,ko00001,ko01000 - - - HAD_2 PHJFGMMN_03437 411477.PARMER_01130 6.53e-102 297.0 COG0663@1|root,COG0663@2|Bacteria,4NG6R@976|Bacteroidetes,2FMKU@200643|Bacteroidia,22W37@171551|Porphyromonadaceae 976|Bacteroidetes S acetyltransferase dapH - - - - - - - - - - - Hexapep PHJFGMMN_03438 411477.PARMER_01129 0.0 1198.0 COG0006@1|root,COG0006@2|Bacteria,4NI1J@976|Bacteroidetes,2FNZP@200643|Bacteroidia,22WTJ@171551|Porphyromonadaceae 976|Bacteroidetes E peptidase M24 - - 3.4.11.9 ko:K01262 - - - - ko00000,ko01000,ko01002 - - - Creatinase_N,Creatinase_N_2,Peptidase_M24,Peptidase_M24_C PHJFGMMN_03439 411477.PARMER_01127 0.0 1355.0 COG0457@1|root,COG0457@2|Bacteria,4NFIY@976|Bacteroidetes,2FMXX@200643|Bacteroidia,22WNA@171551|Porphyromonadaceae 976|Bacteroidetes S Peptidase family M49 - - 3.4.14.4 ko:K01277 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M49 PHJFGMMN_03440 411477.PARMER_01126 4.84e-160 448.0 COG4912@1|root,COG4912@2|Bacteria,4NUAZ@976|Bacteroidetes,2FQ8F@200643|Bacteroidia,22YEE@171551|Porphyromonadaceae 976|Bacteroidetes L DNA alkylation repair enzyme - - - - - - - - - - - - DNA_alkylation PHJFGMMN_03441 999419.HMPREF1077_02481 4.26e-113 324.0 COG0735@1|root,COG0735@2|Bacteria,4NM8S@976|Bacteroidetes,2FN4T@200643|Bacteroidia,22Y5G@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the Fur family fur - - ko:K03711 - - - - ko00000,ko03000 - - - FUR PHJFGMMN_03442 411477.PARMER_01124 1.05e-314 856.0 COG0104@1|root,COG0104@2|Bacteria,4NGRZ@976|Bacteroidetes,2FM8A@200643|Bacteroidia,22VVC@171551|Porphyromonadaceae 976|Bacteroidetes F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP purA GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 M00049 R01135 RC00458,RC00459 ko00000,ko00001,ko00002,ko01000 - - - Adenylsucc_synt PHJFGMMN_03443 411477.PARMER_01123 1.13e-154 435.0 COG2738@1|root,COG2738@2|Bacteria,4NDWG@976|Bacteroidetes,2FPBQ@200643|Bacteroidia,22WK7@171551|Porphyromonadaceae 976|Bacteroidetes S Putative neutral zinc metallopeptidase - - - ko:K06973 - - - - ko00000 - - - Zn_peptidase_2 PHJFGMMN_03444 411477.PARMER_01122 0.0 877.0 COG0124@1|root,COG0124@2|Bacteria,4NE8N@976|Bacteroidetes,2FM6I@200643|Bacteroidia,22X5W@171551|Porphyromonadaceae 976|Bacteroidetes J histidyl-tRNA synthetase hisS - 6.1.1.21 ko:K01892 ko00970,map00970 M00359,M00360 R03655 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - HGTP_anticodon,tRNA-synt_His PHJFGMMN_03445 411477.PARMER_01120 1.18e-55 173.0 COG0234@1|root,COG0234@2|Bacteria,4NS7D@976|Bacteroidetes,2FT5R@200643|Bacteroidia,22YDR@171551|Porphyromonadaceae 976|Bacteroidetes O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter groS GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - ko:K04078 - - - - ko00000,ko03029,ko03110 - - - Cpn10 PHJFGMMN_03446 411477.PARMER_01119 0.0 1032.0 COG0459@1|root,COG0459@2|Bacteria,4NDZM@976|Bacteroidetes,2FMH4@200643|Bacteroidia,22WR5@171551|Porphyromonadaceae 976|Bacteroidetes O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions groL GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 - - - ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 - - - Cpn60_TCP1 PHJFGMMN_03448 411477.PARMER_01116 2.13e-130 370.0 COG1595@1|root,COG1595@2|Bacteria,4NMC0@976|Bacteroidetes,2FP0F@200643|Bacteroidia,22XPS@171551|Porphyromonadaceae 976|Bacteroidetes K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_03449 411477.PARMER_01115 5.64e-84 248.0 2EHRC@1|root,33BH4@2|Bacteria,4NXIE@976|Bacteroidetes,2FTGM@200643|Bacteroidia,22YXC@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG23405 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_03450 411477.PARMER_01114 1.62e-105 305.0 2ER5W@1|root,33IRG@2|Bacteria,4NYCS@976|Bacteroidetes,2FS7R@200643|Bacteroidia,231E6@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG28735 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_03451 411477.PARMER_01113 1.01e-182 509.0 COG1694@1|root,COG3956@2|Bacteria,4NEA3@976|Bacteroidetes,2FKYP@200643|Bacteroidia,22WH1@171551|Porphyromonadaceae 976|Bacteroidetes S COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like mazG - 3.6.1.66 ko:K02428 ko00230,map00230 - R00426,R00720,R01855,R02100,R02720,R03531 RC00002 ko00000,ko00001,ko01000 - - - MazG PHJFGMMN_03452 411477.PARMER_01112 0.0 1357.0 COG4232@1|root,COG4232@2|Bacteria,4NEW6@976|Bacteroidetes,2FNDE@200643|Bacteroidia,22WS5@171551|Porphyromonadaceae 976|Bacteroidetes CO Thiol disulfide interchange protein - - 1.8.1.8 ko:K04084 - - - - ko00000,ko01000,ko03110 5.A.1.1 - - DsbC,DsbD,Thioredoxin_7 PHJFGMMN_03453 411477.PARMER_01111 4.95e-216 596.0 COG0564@1|root,COG0564@2|Bacteria,4NHCT@976|Bacteroidetes,2FNNK@200643|Bacteroidia,22W6X@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the pseudouridine synthase RluA family rluD - 5.4.99.23 ko:K06180 - - - - ko00000,ko01000,ko03009 - - - PseudoU_synth_2,S4 PHJFGMMN_03454 411477.PARMER_01109 0.0 936.0 COG0526@1|root,COG0526@2|Bacteria,4NGCC@976|Bacteroidetes,2FNK1@200643|Bacteroidia 976|Bacteroidetes CO Thioredoxin-like - - - - - - - - - - - - DUF4369,Redoxin,Thioredoxin_8 PHJFGMMN_03455 411477.PARMER_01108 0.0 1751.0 COG2373@1|root,COG2373@2|Bacteria,4NG2S@976|Bacteroidetes,2FPX1@200643|Bacteroidia,22Z3N@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent Receptor Plug Domain - - - - - - - - - - - - - PHJFGMMN_03457 411477.PARMER_02944 1.07e-186 520.0 COG2801@1|root,COG2801@2|Bacteria,4NKGS@976|Bacteroidetes,2FRAQ@200643|Bacteroidia,22YVN@171551|Porphyromonadaceae 976|Bacteroidetes L PFAM Integrase core domain - - - - - - - - - - - - rve,rve_3 PHJFGMMN_03460 411477.PARMER_03481 0.0 1785.0 COG0525@1|root,COG0525@2|Bacteria,4NETB@976|Bacteroidetes,2FPJG@200643|Bacteroidia,22VYV@171551|Porphyromonadaceae 976|Bacteroidetes J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner valS GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 ko:K01873 ko00970,map00970 M00359,M00360 R03665 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,Val_tRNA-synt_C,tRNA-synt_1 PHJFGMMN_03461 411477.PARMER_03483 5.56e-212 584.0 COG1082@1|root,COG1082@2|Bacteria,4NIWS@976|Bacteroidetes,2FQ58@200643|Bacteroidia,22WFN@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2,AP_endonuc_2_N PHJFGMMN_03462 411477.PARMER_03484 1.69e-248 681.0 2DPEG@1|root,331RV@2|Bacteria,4PMV5@976|Bacteroidetes,2G0HH@200643|Bacteroidia,22YV4@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03463 411477.PARMER_03485 1.7e-101 294.0 2CQRQ@1|root,32SMQ@2|Bacteria,4NTA8@976|Bacteroidetes,2FS5Q@200643|Bacteroidia,22YW9@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_03465 742767.HMPREF9456_01547 5.46e-171 490.0 COG4974@1|root,COG4974@2|Bacteria,4NIUH@976|Bacteroidetes,2FMHR@200643|Bacteroidia,22Y7H@171551|Porphyromonadaceae 976|Bacteroidetes L Arm DNA-binding domain - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_03466 999419.HMPREF1077_03703 1.18e-183 512.0 2ERVJ@1|root,33JER@2|Bacteria,4NY6N@976|Bacteroidetes,2FRQX@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_03467 999419.HMPREF1077_03704 1.09e-105 305.0 2CJ8U@1|root,33WVV@2|Bacteria,4P33S@976|Bacteroidetes,2FSUY@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03468 999419.HMPREF1077_03705 0.0 1077.0 COG0513@1|root,COG0513@2|Bacteria,4NN4G@976|Bacteroidetes,2FNQ3@200643|Bacteroidia,230U3@171551|Porphyromonadaceae 976|Bacteroidetes JKL Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_03469 411477.PARMER_00982 1.99e-145 410.0 COG2003@1|root,COG2003@2|Bacteria,4NRCM@976|Bacteroidetes,2FPH6@200643|Bacteroidia,22YIN@171551|Porphyromonadaceae 976|Bacteroidetes L RadC-like JAB domain - - - ko:K03630 - - - - ko00000 - - - RadC PHJFGMMN_03471 999419.HMPREF1077_03708 1.24e-60 203.0 2FDV9@1|root,345VV@2|Bacteria,4P5M2@976|Bacteroidetes,2FP2P@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03473 411477.PARMER_03487 1.88e-111 320.0 COG0582@1|root,COG0582@2|Bacteria,4PMV6@976|Bacteroidetes,2G0HI@200643|Bacteroidia 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_03474 411477.PARMER_03490 0.0 1884.0 COG1131@1|root,COG1131@2|Bacteria,4NHPD@976|Bacteroidetes,2FRF1@200643|Bacteroidia 976|Bacteroidetes V ABC-2 type transporter - - - - - - - - - - - - ABC2_membrane,ABC_tran,TerB PHJFGMMN_03476 411477.PARMER_03492 4.65e-277 758.0 COG2208@1|root,COG4753@1|root,COG2208@2|Bacteria,COG4753@2|Bacteria,4PM3Q@976|Bacteroidetes,2G2UW@200643|Bacteroidia,231YN@171551|Porphyromonadaceae 976|Bacteroidetes T Sigma factor PP2C-like phosphatases - - 3.1.3.3 ko:K07315 - - - - ko00000,ko01000,ko03021 - - - Response_reg,SpoIIE PHJFGMMN_03477 411477.PARMER_03493 2.96e-179 501.0 COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,2FMR7@200643|Bacteroidia 976|Bacteroidetes T GHKL domain - - - - - - - - - - - - HATPase_c,HisKA PHJFGMMN_03478 411477.PARMER_03494 5.04e-258 708.0 COG4191@1|root,COG4191@2|Bacteria,4NMC6@976|Bacteroidetes,2FQ5I@200643|Bacteroidia 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c,Y_Y_Y PHJFGMMN_03479 411477.PARMER_03495 3.2e-91 267.0 COG2172@1|root,COG2172@2|Bacteria,4NV3J@976|Bacteroidetes,2FUZU@200643|Bacteroidia 976|Bacteroidetes T Histidine kinase-like ATPase domain - - 2.7.11.1 ko:K04757 - - - - ko00000,ko01000,ko01001,ko03021 - - - HATPase_c_2 PHJFGMMN_03480 411477.PARMER_03496 2.73e-61 188.0 COG1366@1|root,COG1366@2|Bacteria,4NZQX@976|Bacteroidetes 976|Bacteroidetes T STAS domain - - - - - - - - - - - - STAS PHJFGMMN_03481 411477.PARMER_03497 0.0 922.0 COG0673@1|root,COG0673@2|Bacteria,4NGGS@976|Bacteroidetes,2FTQH@200643|Bacteroidia 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA PHJFGMMN_03482 411477.PARMER_03498 5.38e-273 746.0 28J57@1|root,2Z913@2|Bacteria,4NF9F@976|Bacteroidetes,2FP11@200643|Bacteroidia,22XM4@171551|Porphyromonadaceae 976|Bacteroidetes S Putative carbohydrate metabolism domain - - - - - - - - - - - - DUF5018,PCMD PHJFGMMN_03483 411477.PARMER_03499 4.89e-195 540.0 28U74@1|root,2ZGCS@2|Bacteria,4NN6U@976|Bacteroidetes,2FN7W@200643|Bacteroidia,22XT4@171551|Porphyromonadaceae 976|Bacteroidetes S Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl_2 PHJFGMMN_03484 411477.PARMER_03500 0.0 946.0 COG0673@1|root,COG0673@2|Bacteria,4NGHJ@976|Bacteroidetes,2FQNW@200643|Bacteroidia,22ZVG@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA PHJFGMMN_03485 411477.PARMER_03501 0.0 1095.0 COG3119@1|root,COG3119@2|Bacteria,4NHH7@976|Bacteroidetes,2FMAW@200643|Bacteroidia,22W26@171551|Porphyromonadaceae 976|Bacteroidetes P Domain of unknown function (DUF4976) - - - - - - - - - - - - DUF4976,Sulfatase PHJFGMMN_03487 411477.PARMER_03504 5.78e-72 216.0 2C9BK@1|root,300HS@2|Bacteria,4PHKY@976|Bacteroidetes,2FUT3@200643|Bacteroidia,22YQ9@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4286) - - - - - - - - - - - - DUF4286 PHJFGMMN_03488 411477.PARMER_03505 1.55e-133 378.0 COG0817@1|root,COG0817@2|Bacteria,4NDV6@976|Bacteroidetes,2FNM6@200643|Bacteroidia,22WG4@171551|Porphyromonadaceae 976|Bacteroidetes L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group ruvC - 3.1.22.4 ko:K01159 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - RuvC PHJFGMMN_03489 411477.PARMER_03506 0.0 891.0 COG0334@1|root,COG0334@2|Bacteria,4NEBH@976|Bacteroidetes,2FM43@200643|Bacteroidia,22WFZ@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the Glu Leu Phe Val dehydrogenases family gdh GO:0005575,GO:0005623,GO:0009986,GO:0044464 1.4.1.4 ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 - R00248 RC00006,RC02799 ko00000,ko00001,ko01000 - - - ELFV_dehydrog,ELFV_dehydrog_N PHJFGMMN_03490 411477.PARMER_03508 0.0 1955.0 COG0574@1|root,COG0745@1|root,COG0574@2|Bacteria,COG0745@2|Bacteria,4NGSQ@976|Bacteroidetes,2FM60@200643|Bacteroidia,22W01@171551|Porphyromonadaceae 976|Bacteroidetes GKT Pyruvate phosphate dikinase, PEP pyruvate binding domain ppsA - - - - - - - - - - - PPDK_N,Response_reg PHJFGMMN_03491 411477.PARMER_03509 1.73e-246 676.0 COG1409@1|root,COG1409@2|Bacteria,4NH6X@976|Bacteroidetes,2FNXS@200643|Bacteroidia,22WHG@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos PHJFGMMN_03492 411477.PARMER_03510 2.64e-270 738.0 COG1409@1|root,COG1409@2|Bacteria,4NEQ8@976|Bacteroidetes,2FNYC@200643|Bacteroidia,22XK6@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos PHJFGMMN_03493 411477.PARMER_03511 0.0 1050.0 COG4198@1|root,COG4198@2|Bacteria,4NEQC@976|Bacteroidetes,2FPUQ@200643|Bacteroidia 976|Bacteroidetes S Susd and RagB outer membrane lipoprotein - - - - - - - - - - - - SusD-like_2 PHJFGMMN_03494 411477.PARMER_03512 0.0 1451.0 COG1629@1|root,COG4774@1|root,COG1629@2|Bacteria,COG4774@2|Bacteria,4PKAS@976|Bacteroidetes,2FWM7@200643|Bacteroidia,23011@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN PHJFGMMN_03495 411477.PARMER_03513 2.07e-281 769.0 COG1629@1|root,COG1629@2|Bacteria,4PKAS@976|Bacteroidetes,2FWM7@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug PHJFGMMN_03496 411477.PARMER_03515 2.18e-244 671.0 COG3712@1|root,COG3712@2|Bacteria,4NICU@976|Bacteroidetes,2FPP5@200643|Bacteroidia,22XPI@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_03497 411477.PARMER_03516 4.96e-133 377.0 COG1595@1|root,COG1595@2|Bacteria,4NNDJ@976|Bacteroidetes,2FS0B@200643|Bacteroidia,23043@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_03498 411477.PARMER_03518 4.87e-183 508.0 COG1208@1|root,COG1208@2|Bacteria,4NMJ5@976|Bacteroidetes,2FNEE@200643|Bacteroidia,22XKJ@171551|Porphyromonadaceae 976|Bacteroidetes JM COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) hddC - - - - - - - - - - - NTP_transferase PHJFGMMN_03499 411477.PARMER_03519 0.0 980.0 COG1660@1|root,COG3178@1|root,COG1660@2|Bacteria,COG3178@2|Bacteria,4NIT0@976|Bacteroidetes,2FMEM@200643|Bacteroidia,22VZD@171551|Porphyromonadaceae 976|Bacteroidetes S Phosphotransferase enzyme family - - - - - - - - - - - - APH,ATP_bind_2 PHJFGMMN_03500 411477.PARMER_03521 0.0 897.0 COG0334@1|root,COG0334@2|Bacteria,4NEBH@976|Bacteroidetes,2FM43@200643|Bacteroidia,22XFA@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the Glu Leu Phe Val dehydrogenases family gdhA GO:0003674,GO:0003824,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.4 ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 - R00248 RC00006,RC02799 ko00000,ko00001,ko01000 - - - ELFV_dehydrog,ELFV_dehydrog_N PHJFGMMN_03501 411477.PARMER_03522 8.44e-34 116.0 2ESUT@1|root,33KD7@2|Bacteria,4NZK5@976|Bacteroidetes,2FUTN@200643|Bacteroidia,22YYH@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03502 411477.PARMER_03523 3.27e-83 246.0 2DSC2@1|root,33FFW@2|Bacteria,4NZRV@976|Bacteroidetes,2FVN1@200643|Bacteroidia,2312D@171551|Porphyromonadaceae 976|Bacteroidetes S Putative prokaryotic signal transducing protein - - - - - - - - - - - - DUF2007 PHJFGMMN_03503 411477.PARMER_03524 0.0 908.0 COG1232@1|root,COG1232@2|Bacteria,4NH1E@976|Bacteroidetes,2FPZ0@200643|Bacteroidia,22X7Z@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX hemG - 1.3.3.15,1.3.3.4 ko:K00231 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R03222,R04178 RC00885 ko00000,ko00001,ko00002,ko01000 - - - Amino_oxidase PHJFGMMN_03504 411477.PARMER_03525 0.0 930.0 COG0635@1|root,COG0635@2|Bacteria,4NEY5@976|Bacteroidetes,2FMT8@200643|Bacteroidia,22XEF@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the anaerobic coproporphyrinogen-III oxidase family hemN - - - - - - - - - - - HemN_C,Radical_SAM PHJFGMMN_03505 411477.PARMER_03526 3.88e-283 774.0 COG0477@1|root,COG2814@2|Bacteria,4NHVY@976|Bacteroidetes,2FP43@200643|Bacteroidia,22WSI@171551|Porphyromonadaceae 976|Bacteroidetes EGP Acetyl-coenzyme A transporter 1 - - - - - - - - - - - - MFS_1 PHJFGMMN_03506 411477.PARMER_03527 0.0 1425.0 COG4772@1|root,COG4772@2|Bacteria,4NF0U@976|Bacteroidetes,2FM7N@200643|Bacteroidia,2324B@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - Plug,TonB_dep_Rec PHJFGMMN_03507 411477.PARMER_03528 0.0 1557.0 COG1629@1|root,COG4771@2|Bacteria,4PKE0@976|Bacteroidetes,2G3DW@200643|Bacteroidia,22VYA@171551|Porphyromonadaceae 976|Bacteroidetes P Psort location OuterMembrane, score 10.00 - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_03508 411477.PARMER_03529 1.41e-128 366.0 COG2197@1|root,COG2197@2|Bacteria,4NSJ3@976|Bacteroidetes,2G2UZ@200643|Bacteroidia,22YE2@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, Lux Regulon - - - - - - - - - - - - GerE,PAS_3 PHJFGMMN_03509 411477.PARMER_03530 8.15e-164 458.0 COG2846@1|root,COG2846@2|Bacteria,4NN29@976|Bacteroidetes,2FS5Z@200643|Bacteroidia,22XST@171551|Porphyromonadaceae 976|Bacteroidetes K Di-iron-containing protein involved in the repair of iron-sulfur clusters - - - ko:K07322 - - - - ko00000 - - - GerE PHJFGMMN_03510 411477.PARMER_03531 3.04e-231 635.0 COG1082@1|root,COG1082@2|Bacteria,4NHGW@976|Bacteroidetes,2FNTZ@200643|Bacteroidia,22X97@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2,TAT_signal PHJFGMMN_03511 411477.PARMER_03532 0.0 941.0 COG0673@1|root,COG0673@2|Bacteria,4NF9M@976|Bacteroidetes,2FMQW@200643|Bacteroidia,22XJJ@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,TAT_signal PHJFGMMN_03512 411477.PARMER_03533 0.0 1125.0 COG1262@1|root,COG3005@1|root,COG1262@2|Bacteria,COG3005@2|Bacteria,4NEUZ@976|Bacteroidetes,2FQ5J@200643|Bacteroidia,22X2D@171551|Porphyromonadaceae 976|Bacteroidetes C NapC/NirT cytochrome c family, N-terminal region - - - - - - - - - - - - Cytochrom_NNT,FGE-sulfatase PHJFGMMN_03513 411477.PARMER_03535 0.0 2165.0 COG3250@1|root,COG3250@2|Bacteria,4NF3W@976|Bacteroidetes,2FM0P@200643|Bacteroidia,22VUW@171551|Porphyromonadaceae 976|Bacteroidetes G beta-galactosidase lacZ - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - Bgal_small_N,DUF4981,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N PHJFGMMN_03514 411477.PARMER_03536 4.5e-289 788.0 COG0673@1|root,COG0673@2|Bacteria,4NFMS@976|Bacteroidetes,2FQ3R@200643|Bacteroidia,22W9S@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C PHJFGMMN_03515 411477.PARMER_03537 0.0 1394.0 COG5545@1|root,COG5545@2|Bacteria,4NG2W@976|Bacteroidetes,2FNU1@200643|Bacteroidia,2300D@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG26639 non supervised orthologous group - - - - - - - - - - - - DUF3874,VirE,VirE_N PHJFGMMN_03516 411477.PARMER_03538 2.14e-87 256.0 COG0776@1|root,COG0776@2|Bacteria,4PFPG@976|Bacteroidetes 976|Bacteroidetes L regulation of translation - - - - - - - - - - - - - PHJFGMMN_03517 411477.PARMER_03540 0.0 1266.0 COG1435@1|root,COG1435@2|Bacteria,4NE0A@976|Bacteroidetes,2FN01@200643|Bacteroidia,22ZSI@171551|Porphyromonadaceae 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_03518 411477.PARMER_03541 0.0 2080.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FWW6@200643|Bacteroidia,22VWN@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_03520 411477.PARMER_03542 2.29e-70 212.0 COG1476@1|root,COG1476@2|Bacteria,4NW4R@976|Bacteroidetes,2FVHK@200643|Bacteroidia 976|Bacteroidetes K Helix-turn-helix XRE-family like proteins - - - - - - - - - - - - HTH_26,HTH_3 PHJFGMMN_03522 411477.PARMER_03544 0.0 1010.0 COG0174@1|root,COG0174@2|Bacteria,4NHET@976|Bacteroidetes,2FNAX@200643|Bacteroidia,22W4G@171551|Porphyromonadaceae 976|Bacteroidetes E Psort location Cytoplasmic, score glnA - 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 - R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 - - - Gln-synt_C,Gln-synt_N PHJFGMMN_03523 411477.PARMER_03545 5.03e-142 400.0 COG3663@1|root,COG3663@2|Bacteria,4NP4A@976|Bacteroidetes,2FMNZ@200643|Bacteroidia,22XQQ@171551|Porphyromonadaceae 976|Bacteroidetes L DNA glycosylase mug - - - - - - - - - - - - PHJFGMMN_03524 411477.PARMER_03546 3.4e-82 243.0 COG1393@1|root,COG1393@2|Bacteria,4NRGR@976|Bacteroidetes,2FSM5@200643|Bacteroidia,22YCG@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the ArsC family - - 1.20.4.1 ko:K00537 - - - - ko00000,ko01000 - - - ArsC,Glutaredoxin PHJFGMMN_03525 411477.PARMER_03547 1.19e-143 405.0 28P7K@1|root,2ZC1X@2|Bacteria,4NMQB@976|Bacteroidetes,2FQ00@200643|Bacteroidia,22ZW4@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG25304 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_03526 411477.PARMER_03548 0.0 894.0 COG1055@1|root,COG1055@2|Bacteria,4NGP4@976|Bacteroidetes,2FQ8M@200643|Bacteroidia,22XFH@171551|Porphyromonadaceae 976|Bacteroidetes P Citrate transporter nhaD - - - - - - - - - - - CitMHS PHJFGMMN_03527 411477.PARMER_03550 0.0 1217.0 COG0488@1|root,COG0488@2|Bacteria,4NES5@976|Bacteroidetes,2FMX8@200643|Bacteroidia,22W1Q@171551|Porphyromonadaceae 976|Bacteroidetes S ABC transporter yfmR - - ko:K15738 - - - - ko00000,ko02000 3.A.1.120.6 - - ABC_tran,ABC_tran_CTD,ABC_tran_Xtn PHJFGMMN_03528 999419.HMPREF1077_00818 1.21e-268 737.0 COG0477@1|root,COG2814@2|Bacteria,4NE7F@976|Bacteroidetes,2FQAA@200643|Bacteroidia,22VYY@171551|Porphyromonadaceae 976|Bacteroidetes EGP Major Facilitator Superfamily - - - - - - - - - - - - MFS_1,MFS_1_like,Sugar_tr PHJFGMMN_03529 411477.PARMER_03552 4.5e-124 353.0 COG0350@1|root,COG0350@2|Bacteria,4NFYC@976|Bacteroidetes,2FSA5@200643|Bacteroidia,22XTG@171551|Porphyromonadaceae 976|Bacteroidetes L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated ogt - 2.1.1.63 ko:K00567,ko:K10778 - - - - ko00000,ko01000,ko03000,ko03400 - - - Ada_Zn_binding,DNA_binding_1,HTH_18,Methyltransf_1N PHJFGMMN_03530 411477.PARMER_03553 1.02e-74 224.0 2E81Z@1|root,332G1@2|Bacteria,4NX31@976|Bacteroidetes,2FSJB@200643|Bacteroidia,22YPD@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG30654 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_03531 411477.PARMER_03554 5.22e-209 579.0 COG1284@1|root,COG1284@2|Bacteria,4NG9F@976|Bacteroidetes,2FS6Q@200643|Bacteroidia,22XWC@171551|Porphyromonadaceae 976|Bacteroidetes S Uncharacterised 5xTM membrane BCR, YitT family COG1284 - - - - - - - - - - - - DUF2179,YitT_membrane PHJFGMMN_03532 411477.PARMER_03555 1.95e-291 795.0 COG0436@1|root,COG0436@2|Bacteria,4NG6G@976|Bacteroidetes,2FN1B@200643|Bacteroidia,22X7G@171551|Porphyromonadaceae 976|Bacteroidetes E Aspartate aminotransferase aspC - 2.6.1.1,2.6.1.2,2.6.1.66 ko:K00812,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 - R00258,R00355,R00694,R00734,R00896,R01215,R02433,R02619,R05052 RC00006,RC00008,RC00036 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 PHJFGMMN_03533 411477.PARMER_03556 2.2e-291 796.0 COG4591@1|root,COG4591@2|Bacteria,4NFWZ@976|Bacteroidetes,2FMHC@200643|Bacteroidia,22WJ1@171551|Porphyromonadaceae 976|Bacteroidetes M ABC transporter permease lolE_1 - - ko:K09808 ko02010,map02010 M00255 - - ko00000,ko00001,ko00002,ko02000 3.A.1.125 - - FtsX,MacB_PCD PHJFGMMN_03534 411477.PARMER_03558 3.18e-282 771.0 COG1215@1|root,COG1215@2|Bacteria,4NESG@976|Bacteroidetes,2FN9E@200643|Bacteroidia,22YIF@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase family 2 - - - - - - - - - - - - Glyco_tranf_2_3,Glycos_transf_2 PHJFGMMN_03535 411477.PARMER_03559 2.95e-284 776.0 COG0019@1|root,COG0019@2|Bacteria,4NE7X@976|Bacteroidetes,2FMGB@200643|Bacteroidia,22W16@171551|Porphyromonadaceae 976|Bacteroidetes E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine lysA - 4.1.1.20 ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R00451 RC00299 ko00000,ko00001,ko00002,ko01000 - - - Orn_Arg_deC_N,Orn_DAP_Arg_deC PHJFGMMN_03537 411477.PARMER_03561 0.0 864.0 COG0527@1|root,COG0527@2|Bacteria,4NFWR@976|Bacteroidetes,2FMTV@200643|Bacteroidia,22X04@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the aspartokinase family lysC - 2.7.2.4 ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R00480 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase PHJFGMMN_03538 411477.PARMER_03562 6.4e-164 458.0 COG2884@1|root,COG2884@2|Bacteria,4NEP2@976|Bacteroidetes,2FMNR@200643|Bacteroidia,22W1P@171551|Porphyromonadaceae 976|Bacteroidetes D ABC transporter, ATP-binding protein ftsE - - ko:K09812 ko02010,map02010 M00256 - - ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 - - ABC_tran PHJFGMMN_03539 411477.PARMER_03563 8.19e-140 395.0 COG0139@1|root,COG0140@1|root,COG0139@2|Bacteria,COG0140@2|Bacteria,4NERE@976|Bacteroidetes,2FKYQ@200643|Bacteroidia,22WHQ@171551|Porphyromonadaceae 976|Bacteroidetes E Histidine biosynthesis bifunctional protein hisIE hisI - 3.5.4.19,3.6.1.31 ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04035,R04037 RC00002,RC01055 ko00000,ko00001,ko00002,ko01000 - - - PRA-CH,PRA-PH PHJFGMMN_03540 411477.PARMER_03564 2.81e-180 501.0 COG0107@1|root,COG0107@2|Bacteria,4NE16@976|Bacteroidetes,2FNY2@200643|Bacteroidia,22WRH@171551|Porphyromonadaceae 976|Bacteroidetes E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit hisF GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - ko:K02500 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04558 RC00010,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 - - - His_biosynth PHJFGMMN_03541 411477.PARMER_03565 3.15e-171 478.0 COG0106@1|root,COG0106@2|Bacteria,4NEEX@976|Bacteroidetes,2FMBX@200643|Bacteroidia,22WHU@171551|Porphyromonadaceae 976|Bacteroidetes E Histidine biosynthesis protein hisA GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 ko:K01814 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04640 RC00945 ko00000,ko00001,ko00002,ko01000 - - - His_biosynth PHJFGMMN_03542 411477.PARMER_03566 1.02e-192 534.0 COG0118@1|root,COG0118@2|Bacteria,4NF4J@976|Bacteroidetes,2FPAY@200643|Bacteroidia,22XFN@171551|Porphyromonadaceae 976|Bacteroidetes E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR hisH - - ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04558 RC00010,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 - - - GATase PHJFGMMN_03548 763034.HMPREF9446_03463 3.24e-292 801.0 COG1196@1|root,COG1196@2|Bacteria,4PKGR@976|Bacteroidetes,2G3GQ@200643|Bacteroidia,4AVXN@815|Bacteroidaceae 976|Bacteroidetes D Plasmid recombination enzyme - - - - - - - - - - - - Mob_Pre PHJFGMMN_03549 763034.HMPREF9446_03464 7.71e-209 580.0 COG0358@1|root,COG0358@2|Bacteria,4NH5X@976|Bacteroidetes,2FPHT@200643|Bacteroidia,4AKC7@815|Bacteroidaceae 976|Bacteroidetes L Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - Toprim_2,zf-CHC2 PHJFGMMN_03550 763034.HMPREF9446_03466 4.61e-250 687.0 COG0467@1|root,COG0467@2|Bacteria,4NIAQ@976|Bacteroidetes,2FMJT@200643|Bacteroidia,4AKM8@815|Bacteroidaceae 976|Bacteroidetes T COG NOG25714 non supervised orthologous group - - - - - - - - - - - - AAA_25 PHJFGMMN_03551 763034.HMPREF9446_03467 1.09e-66 202.0 2DYYR@1|root,32V69@2|Bacteria,4NUAY@976|Bacteroidetes,2FTBN@200643|Bacteroidia,4ARBA@815|Bacteroidaceae 976|Bacteroidetes S Protein of unknown function (DUF3853) - - - - - - - - - - - - DUF3853 PHJFGMMN_03552 585543.HMPREF0969_02703 7.3e-207 576.0 2E31N@1|root,32Y21@2|Bacteria,4NX1F@976|Bacteroidetes,2FPRT@200643|Bacteroidia,4AMD9@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_03553 763034.HMPREF9446_03470 2.72e-299 817.0 COG0582@1|root,COG0582@2|Bacteria,4NF8X@976|Bacteroidetes,2FM2R@200643|Bacteroidia,4AKQM@815|Bacteroidaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_03554 411477.PARMER_03570 4.07e-144 405.0 COG2818@1|root,COG2818@2|Bacteria,4NGRC@976|Bacteroidetes,2FN7E@200643|Bacteroidia,22WRE@171551|Porphyromonadaceae 976|Bacteroidetes L DNA-3-methyladenine glycosylase tag - 3.2.2.20 ko:K01246 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Adenine_glyco PHJFGMMN_03555 999419.HMPREF1077_00844 3.57e-25 95.9 COG0724@1|root,COG0724@2|Bacteria,4NUIS@976|Bacteroidetes,2G2C2@200643|Bacteroidia,230Q7@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:RRM_6 - - - - - - - - - - - - RRM_1 PHJFGMMN_03556 411477.PARMER_03572 1.15e-94 277.0 COG1278@1|root,COG1278@2|Bacteria,4NNNH@976|Bacteroidetes,2FSAQ@200643|Bacteroidia,22YBN@171551|Porphyromonadaceae 976|Bacteroidetes K 'Cold-shock' DNA-binding domain cspG - - - - - - - - - - - CSD PHJFGMMN_03557 411477.PARMER_03573 3.74e-186 519.0 COG2364@1|root,COG2364@2|Bacteria,4NH2G@976|Bacteroidetes,2FR84@200643|Bacteroidia 976|Bacteroidetes S Membrane - - - - - - - - - - - - - PHJFGMMN_03558 411477.PARMER_03574 3.99e-127 363.0 COG2095@1|root,COG2095@2|Bacteria,4NG94@976|Bacteroidetes,2FNCS@200643|Bacteroidia,22XUU@171551|Porphyromonadaceae 976|Bacteroidetes U UPF0056 membrane protein marC - - ko:K05595 - - - - ko00000,ko02000 2.A.95.1 - - MarC PHJFGMMN_03559 999419.HMPREF1077_00853 8.98e-191 531.0 COG0739@1|root,COG0739@2|Bacteria,4NQX6@976|Bacteroidetes,2FT6W@200643|Bacteroidia,230GT@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family M23 nlpD_2 - - - - - - - - - - - LysM,Peptidase_M23 PHJFGMMN_03560 411477.PARMER_03576 6.49e-290 790.0 COG1312@1|root,COG1312@2|Bacteria,4NFA5@976|Bacteroidetes,2FM15@200643|Bacteroidia,22WGQ@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the dehydration of D-mannonate uxuA GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005975,GO:0005996,GO:0006063,GO:0006064,GO:0006082,GO:0008150,GO:0008152,GO:0008198,GO:0008927,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019585,GO:0019752,GO:0030145,GO:0032787,GO:0042839,GO:0042840,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046872,GO:0046914,GO:0071704,GO:0072329,GO:1901575 4.2.1.8 ko:K01686 ko00040,ko01100,map00040,map01100 M00061 R05606 RC00543 ko00000,ko00001,ko00002,ko01000 - - - UxuA PHJFGMMN_03561 411477.PARMER_03577 7.14e-188 522.0 COG1028@1|root,COG1028@2|Bacteria,4NG8R@976|Bacteroidetes,2FMB9@200643|Bacteroidia,22WEJ@171551|Porphyromonadaceae 976|Bacteroidetes IQ KR domain uxuB - - - - - - - - - - - adh_short,adh_short_C2 PHJFGMMN_03562 411477.PARMER_03578 1.84e-248 682.0 COG1609@1|root,COG1609@2|Bacteria,4NE81@976|Bacteroidetes,2FN0D@200643|Bacteroidia,22WVG@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn _helix lactose operon repressor - - - ko:K02529 - - - - ko00000,ko03000 - - - LacI,Peripla_BP_4 PHJFGMMN_03563 411477.PARMER_03579 1.89e-141 400.0 COG5473@1|root,COG5473@2|Bacteria,4PMV7@976|Bacteroidetes,2FVN3@200643|Bacteroidia,22YW8@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03566 880070.Cycma_3265 2.59e-22 99.4 COG1192@1|root,COG1192@2|Bacteria,4NPWX@976|Bacteroidetes,47T25@768503|Cytophagia 976|Bacteroidetes D AAA domain - - - ko:K03496 - - - - ko00000,ko03036,ko04812 - - - AAA_31,CbiA PHJFGMMN_03567 457424.BFAG_03620 6.41e-51 192.0 COG3843@1|root,COG3843@2|Bacteria,4NJVA@976|Bacteroidetes,2G2CF@200643|Bacteroidia,4AVWK@815|Bacteroidaceae 976|Bacteroidetes U Relaxase/Mobilisation nuclease domain - - - - - - - - - - - - Relaxase PHJFGMMN_03575 679199.HMPREF9332_00584 1.32e-207 684.0 COG2373@1|root,COG2373@2|Bacteria 2|Bacteria U Large extracellular alpha-helical protein - - - ko:K13735 ko05100,map05100 - - - ko00000,ko00001 - - - Big_3,CARDB,CBM_X2,CHU_C,CarboxypepD_reg,DUF11,IAT_beta,IgGFc_binding,SdrD_B,SprB PHJFGMMN_03577 411477.PARMER_03444 0.0 1510.0 COG1061@1|root,COG1061@2|Bacteria,4NU9U@976|Bacteroidetes,2FR0U@200643|Bacteroidia,23176@171551|Porphyromonadaceae 976|Bacteroidetes L Helicase associated domain - - - - - - - - - - - - HA,Helicase_C,ResIII PHJFGMMN_03578 411477.PARMER_03445 1.89e-67 204.0 2F2PS@1|root,33VK7@2|Bacteria,4P2ZT@976|Bacteroidetes,2FSYE@200643|Bacteroidia,230PR@171551|Porphyromonadaceae 976|Bacteroidetes S Arm DNA-binding domain - - - - - - - - - - - - Arm-DNA-bind_5 PHJFGMMN_03580 411477.PARMER_03447 1.2e-283 774.0 COG0381@1|root,COG0381@2|Bacteria,4NGBD@976|Bacteroidetes,2FM5D@200643|Bacteroidia,22W64@171551|Porphyromonadaceae 976|Bacteroidetes G UDP-N-acetylglucosamine 2-epimerase - - 5.1.3.14 ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 M00362 R00420 RC00290 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Epimerase_2 PHJFGMMN_03581 411477.PARMER_03448 2.78e-294 802.0 COG0438@1|root,COG0438@2|Bacteria,4NGU7@976|Bacteroidetes,2FS6M@200643|Bacteroidia 976|Bacteroidetes M Glycosyl transferase 4-like domain - - - - - - - - - - - - Glyco_trans_1_4,Glyco_trans_4_4,Glycos_transf_1 PHJFGMMN_03582 411477.PARMER_03449 0.0 1064.0 COG5360@1|root,COG5360@2|Bacteria,4NHMA@976|Bacteroidetes,2G2Q8@200643|Bacteroidia,2313F@171551|Porphyromonadaceae 976|Bacteroidetes S Heparinase II/III N-terminus - - - - - - - - - - - - Hepar_II_III,Hepar_II_III_N PHJFGMMN_03583 411477.PARMER_03450 1.68e-254 697.0 COG0438@1|root,COG0438@2|Bacteria,4P1ER@976|Bacteroidetes,2G2SS@200643|Bacteroidia 976|Bacteroidetes M Glycosyl transferases group 1 - - - - - - - - - - - - - PHJFGMMN_03584 696369.KI912183_gene2045 6.92e-08 62.8 COG2327@1|root,COG2327@2|Bacteria,1TPTI@1239|Firmicutes,248QN@186801|Clostridia,2603G@186807|Peptococcaceae 186801|Clostridia S PFAM Polysaccharide pyruvyl transferase csaB - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1,PS_pyruv_trans PHJFGMMN_03585 1280.SAXN108_1032 0.000784 50.1 COG0438@1|root,COG0438@2|Bacteria,1UZU7@1239|Firmicutes,4H9N9@91061|Bacilli,4GYDM@90964|Staphylococcaceae 91061|Bacilli M Glycosyl transferases group 1 tagE - 2.4.1.52 ko:K00712 - - - - ko00000,ko01000,ko01003 - GT4 - Glyco_trans_A_1,Glycos_transf_1 PHJFGMMN_03586 411477.PARMER_03451 5.1e-264 723.0 COG0438@1|root,COG0438@2|Bacteria,4NPUH@976|Bacteroidetes,2G2ST@200643|Bacteroidia 976|Bacteroidetes M Glycosyltransferase, group 1 family protein - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 PHJFGMMN_03588 411477.PARMER_03453 7.66e-251 687.0 COG3274@1|root,COG3274@2|Bacteria,4NW0Q@976|Bacteroidetes,2FVBV@200643|Bacteroidia,22Z2B@171551|Porphyromonadaceae 976|Bacteroidetes S Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 PHJFGMMN_03589 411477.PARMER_03454 2.16e-239 657.0 COG1216@1|root,COG1216@2|Bacteria,4P2IE@976|Bacteroidetes,2FTID@200643|Bacteroidia,230C1@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyltransferase like family 2 - - - - - - - - - - - - Glycos_transf_2 PHJFGMMN_03590 411477.PARMER_03457 3.4e-81 249.0 COG3594@1|root,COG3594@2|Bacteria 2|Bacteria G nodulation - - - ko:K13663 - - - - ko00000,ko01000 - - - Acyl_transf_3 PHJFGMMN_03592 411477.PARMER_03459 0.0 932.0 COG2244@1|root,COG2244@2|Bacteria,4NEGZ@976|Bacteroidetes,2FNUG@200643|Bacteroidia,22WG6@171551|Porphyromonadaceae 976|Bacteroidetes S Polysaccharide biosynthesis protein - - - - - - - - - - - - MatE,Polysacc_synt PHJFGMMN_03593 411477.PARMER_03460 1.92e-213 590.0 COG0438@1|root,COG0438@2|Bacteria,4NRN9@976|Bacteroidetes,2FSW0@200643|Bacteroidia,230EW@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 PHJFGMMN_03595 411477.PARMER_03462 2.81e-301 820.0 COG0677@1|root,COG0677@2|Bacteria,4NDTW@976|Bacteroidetes,2FMSD@200643|Bacteroidia,22WMZ@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - 1.1.1.336 ko:K02472 ko00520,ko05111,map00520,map05111 - R03317 RC00291 ko00000,ko00001,ko01000 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N PHJFGMMN_03596 411477.PARMER_03463 4.79e-251 687.0 COG2148@1|root,COG2148@2|Bacteria,4NFIA@976|Bacteroidetes,2FMUQ@200643|Bacteroidia,22XDG@171551|Porphyromonadaceae 976|Bacteroidetes M sugar transferase - - - - - - - - - - - - Bac_transf PHJFGMMN_03597 457424.BFAG_01277 6.3e-55 189.0 COG1403@1|root,COG1403@2|Bacteria,4NSR1@976|Bacteroidetes,2FTXF@200643|Bacteroidia,4ASWC@815|Bacteroidaceae 976|Bacteroidetes V HNH endonuclease - - - - - - - - - - - - HNH_4 PHJFGMMN_03598 457424.BFAG_01276 1.21e-103 338.0 COG3593@1|root,COG3593@2|Bacteria,4PMP9@976|Bacteroidetes,2FV0G@200643|Bacteroidia,4AVAB@815|Bacteroidaceae 976|Bacteroidetes L AAA ATPase domain - - - - - - - - - - - - AAA_15,AAA_21 PHJFGMMN_03599 411477.PARMER_03466 7.71e-166 464.0 COG4464@1|root,COG4464@2|Bacteria,4NMUT@976|Bacteroidetes,2FNRW@200643|Bacteroidia,22ZP9@171551|Porphyromonadaceae 976|Bacteroidetes GM COG COG4464 Capsular polysaccharide biosynthesis protein - - - - - - - - - - - - - PHJFGMMN_03600 411477.PARMER_03467 0.0 1497.0 COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,4NEXU@976|Bacteroidetes,2FM9K@200643|Bacteroidia,22X1F@171551|Porphyromonadaceae 976|Bacteroidetes DM Chain length determinant protein - - - - - - - - - - - - AAA_31,CbiA,GNVR,Wzz PHJFGMMN_03601 411477.PARMER_03468 4.82e-183 509.0 COG1596@1|root,COG1596@2|Bacteria,4NNJT@976|Bacteroidetes,2FMYU@200643|Bacteroidia,22ZWH@171551|Porphyromonadaceae 976|Bacteroidetes M COG COG1596 Periplasmic protein involved in polysaccharide export - - - ko:K01991 ko02026,map02026 - - - ko00000,ko00001,ko02000 1.B.18 - - Poly_export,SLBB PHJFGMMN_03602 411477.PARMER_03469 4.38e-130 369.0 COG0250@1|root,COG0250@2|Bacteria,4NUFS@976|Bacteroidetes,2FPHC@200643|Bacteroidia,22Y6K@171551|Porphyromonadaceae 976|Bacteroidetes K Transcription termination factor nusG - - - - - - - - - - - - NusG PHJFGMMN_03603 411477.PARMER_03472 4.03e-282 772.0 COG4974@1|root,COG4974@2|Bacteria,4P01T@976|Bacteroidetes,2FNQ0@200643|Bacteroidia,22WIY@171551|Porphyromonadaceae 976|Bacteroidetes L COG NOG11942 non supervised orthologous group - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_03604 435591.BDI_2230 3.99e-126 365.0 2DUMP@1|root,33RAQ@2|Bacteria,4P0F9@976|Bacteroidetes,2FR87@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score - - - - - - - - - - - - - PHJFGMMN_03605 435591.BDI_3247 4.52e-209 579.0 COG3843@1|root,COG3843@2|Bacteria,4NH77@976|Bacteroidetes,2FM27@200643|Bacteroidia,22XK0@171551|Porphyromonadaceae 976|Bacteroidetes U Mobilization protein - - - - - - - - - - - - Relaxase PHJFGMMN_03606 435591.BDI_2232 1.12e-78 234.0 2E51N@1|root,32VIN@2|Bacteria,4NSRP@976|Bacteroidetes,2FSCY@200643|Bacteroidia,231QX@171551|Porphyromonadaceae 976|Bacteroidetes S Bacterial mobilisation protein (MobC) - - - - - - - - - - - - MobC PHJFGMMN_03607 411477.PARMER_04465 4.93e-104 301.0 2DMKQ@1|root,32S8K@2|Bacteria,4NTNQ@976|Bacteroidetes,2FRHC@200643|Bacteroidia,231QD@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3408) - - - - - - - - - - - - DUF3408 PHJFGMMN_03608 226186.BT_1129 2.47e-68 206.0 COG0789@1|root,COG0789@2|Bacteria,4NSUY@976|Bacteroidetes,2FT8V@200643|Bacteroidia,4ARB0@815|Bacteroidaceae 976|Bacteroidetes K COG NOG34759 non supervised orthologous group - - - - - - - - - - - - HTH_17 PHJFGMMN_03609 1203611.KB894559_gene26 7.81e-67 203.0 2DVM5@1|root,33WBN@2|Bacteria,4P37Q@976|Bacteroidetes,2FSVP@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - HTH_17 PHJFGMMN_03610 1203611.KB894559_gene25 3.39e-90 264.0 2C603@1|root,3310V@2|Bacteria,4NWY2@976|Bacteroidetes,2FS09@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03611 435591.BDI_2239 6.83e-133 376.0 COG1595@1|root,COG1595@2|Bacteria,4NTTR@976|Bacteroidetes,2FNHN@200643|Bacteroidia,22ZQ8@171551|Porphyromonadaceae 976|Bacteroidetes K Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_03612 411477.PARMER_01082 4.46e-41 137.0 2F5RK@1|root,33YAG@2|Bacteria,4P36Q@976|Bacteroidetes,2FUVH@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03613 1121098.HMPREF1534_03643 1.26e-148 417.0 COG0454@1|root,COG0454@2|Bacteria,4NPC8@976|Bacteroidetes,2FR43@200643|Bacteroidia,4ANMC@815|Bacteroidaceae 976|Bacteroidetes K Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_03614 1121098.HMPREF1534_03644 2.21e-27 99.8 2FG66@1|root,3482M@2|Bacteria,4P6FM@976|Bacteroidetes,2FURG@200643|Bacteroidia,4ASD8@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03615 411477.PARMER_01732 2.25e-99 289.0 2F0I6@1|root,33TKW@2|Bacteria,4P257@976|Bacteroidetes,2FRUQ@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03616 411477.PARMER_01733 1.07e-303 827.0 COG0582@1|root,COG0582@2|Bacteria,4NDZJ@976|Bacteroidetes,2FM4Q@200643|Bacteroidia,22WPV@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_03617 1121101.HMPREF1532_00277 2.49e-181 592.0 COG1075@1|root,COG2373@1|root,COG4886@1|root,COG5492@1|root,COG1075@2|Bacteria,COG2373@2|Bacteria,COG4886@2|Bacteria,COG5492@2|Bacteria 2|Bacteria N domain, Protein yddJ - - ko:K13735 ko05100,map05100 - - - ko00000,ko00001 - - - Big_2,LCAT,SLH PHJFGMMN_03618 15368.BRADI3G48790.1 2.89e-09 70.5 COG4886@1|root,2QPYS@2759|Eukaryota,37Q18@33090|Viridiplantae,3GCT9@35493|Streptophyta,3KYW0@4447|Liliopsida,3IKM8@38820|Poales 35493|Streptophyta T Leucine rich repeat - - 2.7.11.1 ko:K04730 ko04010,ko04064,ko04620,ko04624,ko04722,ko05133,ko05140,ko05142,ko05145,ko05152,ko05162,ko05169,map04010,map04064,map04620,map04624,map04722,map05133,map05140,map05142,map05145,map05152,map05162,map05169 M00686 - - ko00000,ko00001,ko00002,ko01000,ko01001 - - - LRRNT_2,LRR_1,LRR_4,LRR_8,Pkinase PHJFGMMN_03619 997884.HMPREF1068_01885 6.62e-75 278.0 COG5492@1|root,COG5492@2|Bacteria,4PP40@976|Bacteroidetes,2FQBE@200643|Bacteroidia,4AMT0@815|Bacteroidaceae 976|Bacteroidetes N Leucine rich repeats (6 copies) - - - - - - - - - - - - LRR_5 PHJFGMMN_03620 1235803.C825_03925 1.31e-94 285.0 COG3279@1|root,COG3279@2|Bacteria,4NFPV@976|Bacteroidetes,2FN7I@200643|Bacteroidia 976|Bacteroidetes T COG3279 Response regulator of the LytR AlgR family - - - ko:K02477 - - - - ko00000,ko02022 - - - LytTR,Response_reg PHJFGMMN_03621 1268240.ATFI01000001_gene3248 3.43e-47 170.0 COG0457@1|root,COG2972@1|root,COG0457@2|Bacteria,COG2972@2|Bacteria,4NF45@976|Bacteroidetes,2G0ER@200643|Bacteroidia,4AVA5@815|Bacteroidaceae 976|Bacteroidetes T Tetratricopeptide repeat - - - - - - - - - - - - HATPase_c,His_kinase,TPR_10,TPR_12,TPR_8 PHJFGMMN_03622 470145.BACCOP_01626 2.65e-292 796.0 COG3385@1|root,COG3385@2|Bacteria,4NHKV@976|Bacteroidetes,2FPZQ@200643|Bacteroidia,4AKJ1@815|Bacteroidaceae 976|Bacteroidetes L COG COG3385 FOG Transposase and inactivated derivatives - - - - - - - - - - - - DDE_Tnp_1,DUF4372 PHJFGMMN_03624 763034.HMPREF9446_00356 7.93e-231 635.0 COG2801@1|root,COG2801@2|Bacteria,4NPG9@976|Bacteroidetes,2FRUK@200643|Bacteroidia 976|Bacteroidetes L Winged helix-turn helix - - - - - - - - - - - - HTH_29,HTH_32,rve PHJFGMMN_03625 435590.BVU_3719 3.56e-68 219.0 COG0582@1|root,COG0582@2|Bacteria,4NDZJ@976|Bacteroidetes,2FM4Q@200643|Bacteroidia,4AKDX@815|Bacteroidaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_03626 1077285.AGDG01000032_gene4281 5.53e-37 135.0 COG0582@1|root,COG0582@2|Bacteria,4NDZJ@976|Bacteroidetes,2FM4Q@200643|Bacteroidia,4AKDX@815|Bacteroidaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_03627 272559.BF9343_1717 7.7e-174 501.0 COG1672@1|root,COG1672@2|Bacteria,4NJ2E@976|Bacteroidetes,2FPC6@200643|Bacteroidia,4AMU7@815|Bacteroidaceae 976|Bacteroidetes S ATPase (AAA superfamily) - - - ko:K06921 - - - - ko00000 - - - ATPase_2,DUF234 PHJFGMMN_03628 1122931.AUAE01000024_gene3694 6.61e-179 509.0 COG1373@1|root,COG1373@2|Bacteria,4NE3E@976|Bacteroidetes,2FP33@200643|Bacteroidia,23032@171551|Porphyromonadaceae 976|Bacteroidetes S AAA domain - - - ko:K07133 - - - - ko00000 - - - AAA_14 PHJFGMMN_03636 435591.BDI_0317 0.0 1765.0 COG1196@1|root,COG1196@2|Bacteria,4NJ5T@976|Bacteroidetes,2FNV3@200643|Bacteroidia 976|Bacteroidetes D Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - DUF3584 PHJFGMMN_03637 435591.BDI_0316 9.94e-123 351.0 2CGGN@1|root,2ZX47@2|Bacteria,4NNTI@976|Bacteroidetes,2FR0Q@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_03638 435591.BDI_0315 1.07e-229 639.0 28HAZ@1|root,2Z7N5@2|Bacteria,4NH23@976|Bacteroidetes,2FRP2@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_03639 547042.BACCOPRO_02414 1.74e-51 164.0 COG1943@1|root,COG1943@2|Bacteria,4NWI3@976|Bacteroidetes,2FZ9S@200643|Bacteroidia 976|Bacteroidetes L Transposase IS200 like - - - ko:K07491 - - - - ko00000 - - - Y1_Tnp PHJFGMMN_03640 1249997.JHZW01000002_gene1774 3.19e-54 213.0 COG4995@1|root,COG4995@2|Bacteria,4NKPZ@976|Bacteroidetes,1I0EX@117743|Flavobacteriia 976|Bacteroidetes S CHAT domain - - - - - - - - - - - - CHAT,TPR_10,TPR_12,TPR_7,TPR_8 PHJFGMMN_03644 547042.BACCOPRO_02412 2.82e-192 541.0 COG0675@1|root,COG0675@2|Bacteria,4PJXW@976|Bacteroidetes,2FTB4@200643|Bacteroidia,4AU3Y@815|Bacteroidaceae 976|Bacteroidetes L Probable transposase - - - - - - - - - - - - HTH_OrfB_IS605,OrfB_IS605,OrfB_Zn_ribbon PHJFGMMN_03646 679191.HMPREF9018_0860 1.02e-141 428.0 COG1479@1|root,COG1479@2|Bacteria,4NE8H@976|Bacteroidetes,2G2ES@200643|Bacteroidia 976|Bacteroidetes S Protein of unknown function (DUF1524) - - - - - - - - - - - - DUF1524,DUF262 PHJFGMMN_03647 679191.HMPREF9018_0861 7.59e-95 318.0 COG1479@1|root,COG1479@2|Bacteria,4NMNX@976|Bacteroidetes,2FRRJ@200643|Bacteroidia 976|Bacteroidetes S Protein of unknown function DUF262 - - - - - - - - - - - - DUF262 PHJFGMMN_03648 592026.GCWU0000282_001732 5.95e-23 114.0 COG2247@1|root,COG4932@1|root,COG2247@2|Bacteria,COG4932@2|Bacteria,1V2HJ@1239|Firmicutes,24GGK@186801|Clostridia 186801|Clostridia M Listeria-Bacteroides repeat domain (List_Bact_rpt) - - - - - - - - - - - - Big_2,Flg_new PHJFGMMN_03649 1120998.AUFC01000039_gene3011 9.3e-21 98.6 COG1361@1|root,COG5492@1|root,COG1361@2|Bacteria,COG5492@2|Bacteria,1UKMG@1239|Firmicutes,25FZ6@186801|Clostridia 186801|Clostridia N Conserved repeat domain - - - - - - - - - - - - - PHJFGMMN_03651 470145.BACCOP_01686 4.92e-65 198.0 COG1396@1|root,COG1396@2|Bacteria,4NRHE@976|Bacteroidetes,2FT8H@200643|Bacteroidia,4ARKN@815|Bacteroidaceae 976|Bacteroidetes K Toxin-antitoxin system, antitoxin component, Xre family - - - - - - - - - - - - HTH_3,HTH_31 PHJFGMMN_03652 470145.BACCOP_01687 8.03e-226 630.0 COG3550@1|root,COG3550@2|Bacteria,4NFYY@976|Bacteroidetes,2FP3A@200643|Bacteroidia,4AMRG@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - 2.7.11.1 ko:K07154 - - - - ko00000,ko01000,ko01001,ko02048 - - - Couple_hipA,HipA_C PHJFGMMN_03653 1122985.HMPREF1991_02228 7.47e-14 70.1 COG1396@1|root,COG1396@2|Bacteria,4P715@976|Bacteroidetes,2FVVT@200643|Bacteroidia 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_3 PHJFGMMN_03660 1236514.BAKL01000004_gene489 4.13e-52 177.0 COG1192@1|root,COG1192@2|Bacteria,4NGFE@976|Bacteroidetes,2FMB5@200643|Bacteroidia,4AM2M@815|Bacteroidaceae 976|Bacteroidetes D CobQ CobB MinD ParA nucleotide binding domain protein - - - - - - - - - - - - AAA_31 PHJFGMMN_03663 1124780.ANNU01000025_gene3363 7.23e-125 387.0 COG0507@1|root,COG0507@2|Bacteria,4NF6J@976|Bacteroidetes,47JK1@768503|Cytophagia 976|Bacteroidetes L PIF1-like helicase - - - - - - - - - - - - HTH_40,Herpes_Helicase,PIF1 PHJFGMMN_03664 1347087.CBYO010000022_gene3207 2.82e-06 56.6 COG2404@1|root,COG2404@2|Bacteria,1TQPZ@1239|Firmicutes,4HCSM@91061|Bacilli 91061|Bacilli S phosphohydrolase (DHH superfamily) yngD - - ko:K07097 - - - - ko00000 - - - DHHA1 PHJFGMMN_03666 457424.BFAG_00765 1.86e-25 95.5 2FFFR@1|root,347D6@2|Bacteria,4P66C@976|Bacteroidetes,2FUIV@200643|Bacteroidia,4AS7C@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03672 742767.HMPREF9456_01402 5.41e-45 171.0 COG1570@1|root,COG1570@2|Bacteria,4PIPV@976|Bacteroidetes,2FPIP@200643|Bacteroidia 976|Bacteroidetes L Exonuclease VII, large subunit - - 3.1.11.6 ko:K03601 ko03430,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - Exonuc_VII_L PHJFGMMN_03685 471870.BACINT_00445 1.3e-16 72.4 2A7E7@1|root,30WBM@2|Bacteria,4P9R5@976|Bacteroidetes,2FVBF@200643|Bacteroidia,4ASGG@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03695 357276.EL88_01640 3.71e-38 145.0 COG1074@1|root,COG1074@2|Bacteria,4NTUR@976|Bacteroidetes,2FTVN@200643|Bacteroidia 976|Bacteroidetes L ATP-dependent DNA helicase activity - - - - - - - - - - - - PDDEXK_1 PHJFGMMN_03697 1235788.C802_04634 3.92e-11 60.8 2DD6K@1|root,2ZGSS@2|Bacteria,4P8GN@976|Bacteroidetes,2FUVC@200643|Bacteroidia,4AUC8@815|Bacteroidaceae 976|Bacteroidetes S Antitoxin Phd_YefM, type II toxin-antitoxin system - - - - - - - - - - - - PhdYeFM_antitox PHJFGMMN_03698 999413.HMPREF1094_00596 3.32e-22 95.1 2ECXH@1|root,336UQ@2|Bacteria,1VT65@1239|Firmicutes 1239|Firmicutes - - - - - - - - - - - - - - - PHJFGMMN_03699 1392486.JIAF01000004_gene2652 9.8e-51 170.0 2A8C7@1|root,30XDU@2|Bacteria,4PAU1@976|Bacteroidetes,2FXRV@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03701 470145.BACCOP_03550 1.89e-44 150.0 2AFV6@1|root,315XQ@2|Bacteria,4PK81@976|Bacteroidetes,2FU7Z@200643|Bacteroidia,4AS7S@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03704 1380600.AUYN01000003_gene251 8.61e-197 588.0 COG0210@1|root,COG0210@2|Bacteria,4NIKD@976|Bacteroidetes,1I7Z7@117743|Flavobacteriia 976|Bacteroidetes L UvrD-like helicase C-terminal domain - - - - - - - - - - - - UvrD-helicase,UvrD_C PHJFGMMN_03706 742727.HMPREF9447_00601 1.99e-19 82.4 2F8HB@1|root,340W5@2|Bacteria,4P4G5@976|Bacteroidetes,2FTF1@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03714 483216.BACEGG_00547 3.6e-20 94.0 28K0Q@1|root,2Z9QK@2|Bacteria,4P0II@976|Bacteroidetes,2FS3W@200643|Bacteroidia,4AR0P@815|Bacteroidaceae 976|Bacteroidetes S Protein of unknown function (DUF2786) - - - - - - - - - - - - DUF2786 PHJFGMMN_03718 1235788.C802_01095 5.72e-13 63.5 2FGMM@1|root,348H9@2|Bacteria,4P6A0@976|Bacteroidetes,2FSB6@200643|Bacteroidia,4AQW0@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_03719 411477.PARMER_04088 0.0 978.0 COG3666@1|root,COG3666@2|Bacteria,4NEDD@976|Bacteroidetes,2FNIQ@200643|Bacteroidia,22WUY@171551|Porphyromonadaceae 976|Bacteroidetes L COG3666 Transposase and inactivated derivatives - - - - - - - - - - - - DDE_Tnp_1,DDE_Tnp_1_6,DUF772 PHJFGMMN_03722 742727.HMPREF9447_04814 2.71e-135 391.0 2A8AE@1|root,30XBU@2|Bacteria,4PART@976|Bacteroidetes,2FXKF@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03724 357276.EL88_13855 4.16e-317 909.0 COG0553@1|root,COG0827@1|root,COG0553@2|Bacteria,COG0827@2|Bacteria,4NKYW@976|Bacteroidetes,2FQFS@200643|Bacteroidia,4AKRB@815|Bacteroidaceae 976|Bacteroidetes L N-6 DNA Methylase - - - - - - - - - - - - Helicase_C,MTS,N6_Mtase,ResIII PHJFGMMN_03727 667015.Bacsa_1274 5.12e-20 84.0 COG3620@1|root,COG3620@2|Bacteria,4PK30@976|Bacteroidetes,2FTJQ@200643|Bacteroidia,4AVM2@815|Bacteroidaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_3 PHJFGMMN_03728 762968.HMPREF9441_00511 4.43e-105 305.0 2DMHX@1|root,32RNA@2|Bacteria,4NPFF@976|Bacteroidetes,2FQ52@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03729 762982.HMPREF9442_01796 1.44e-149 423.0 COG2856@1|root,COG2856@2|Bacteria,4NM3X@976|Bacteroidetes,2FP87@200643|Bacteroidia 976|Bacteroidetes E IrrE N-terminal-like domain - - - - - - - - - - - - Peptidase_M78 PHJFGMMN_03730 471870.BACINT_01474 7.17e-70 211.0 COG1396@1|root,COG1396@2|Bacteria,4NNKF@976|Bacteroidetes,2FSGH@200643|Bacteroidia,4AR6J@815|Bacteroidaceae 976|Bacteroidetes K Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - HTH_19 PHJFGMMN_03736 1346791.M529_00190 2.02e-27 119.0 COG0270@1|root,COG0270@2|Bacteria,1MV9H@1224|Proteobacteria,2U0FE@28211|Alphaproteobacteria,2K4X0@204457|Sphingomonadales 204457|Sphingomonadales H C-5 cytosine-specific DNA methylase - - 2.1.1.37 ko:K00558 ko00270,ko01100,ko05206,map00270,map01100,map05206 M00035 R04858 RC00003,RC00332 ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036 - - - DNA_methylase PHJFGMMN_03738 1268240.ATFI01000003_gene5223 8.37e-104 316.0 COG0582@1|root,COG0582@2|Bacteria,4NI5P@976|Bacteroidetes,2G04I@200643|Bacteroidia,4AN43@815|Bacteroidaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_03753 1122985.HMPREF1991_00971 1.9e-122 373.0 COG2268@1|root,COG2268@2|Bacteria,4NIH3@976|Bacteroidetes 976|Bacteroidetes S SPFH Band 7 PHB domain protein yqiK - - ko:K07192 ko04910,map04910 - - - ko00000,ko00001,ko03036,ko04131,ko04147 - - - Band_7,Flot PHJFGMMN_03756 1265505.ATUG01000002_gene2563 8.54e-54 206.0 COG0454@1|root,COG0503@1|root,COG1040@1|root,COG0456@2|Bacteria,COG0503@2|Bacteria,COG1040@2|Bacteria,1QV41@1224|Proteobacteria,42Q37@68525|delta/epsilon subdivisions,2WKE3@28221|Deltaproteobacteria,2MMN4@213118|Desulfobacterales 28221|Deltaproteobacteria K competence protein - - - - - - - - - - - - - PHJFGMMN_03757 226186.BT_2615 8.74e-173 497.0 COG3344@1|root,COG3344@2|Bacteria,4NGGU@976|Bacteroidetes,2G2I8@200643|Bacteroidia,4AVZB@815|Bacteroidaceae 976|Bacteroidetes H Group II intron, maturase-specific domain - - 2.7.7.49 ko:K00986 - - - - ko00000,ko01000 - - - GIIM,Intron_maturas2,RVT_1,RVT_N PHJFGMMN_03758 457424.BFAG_00716 1.54e-58 182.0 COG1396@1|root,COG1396@2|Bacteria,4NRHE@976|Bacteroidetes,2FT8H@200643|Bacteroidia,4AR7W@815|Bacteroidaceae 976|Bacteroidetes K regulator of the anaerobic catobolism of benzoate BzdR K00891 - - - - - - - - - - - - HTH_3,HTH_31 PHJFGMMN_03759 457424.BFAG_00717 8.69e-314 854.0 COG3550@1|root,COG3550@2|Bacteria,4NFYY@976|Bacteroidetes,2FP3A@200643|Bacteroidia,4AMRG@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - 2.7.11.1 ko:K07154 - - - - ko00000,ko01000,ko01001,ko02048 - - - Couple_hipA,HipA_C PHJFGMMN_03760 742817.HMPREF9449_00593 3.24e-37 136.0 2BXUM@1|root,32WQK@2|Bacteria,4NUD3@976|Bacteroidetes,2FT0D@200643|Bacteroidia,22XV7@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03761 411477.PARMER_00451 2.39e-29 115.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN9Q@200643|Bacteroidia,22WY9@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD PHJFGMMN_03762 1235803.C825_05258 5.54e-226 660.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN9Q@200643|Bacteroidia 976|Bacteroidetes V Efflux ABC transporter, permease protein - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD PHJFGMMN_03763 763034.HMPREF9446_03241 2.2e-22 89.4 COG1396@1|root,COG1396@2|Bacteria,4NUWZ@976|Bacteroidetes,2G2EJ@200643|Bacteroidia,4AVXP@815|Bacteroidaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_3 PHJFGMMN_03765 1077285.AGDG01000008_gene2673 0.0 923.0 COG3666@1|root,COG3666@2|Bacteria,4NEDD@976|Bacteroidetes,2FNIQ@200643|Bacteroidia,4AKE2@815|Bacteroidaceae 976|Bacteroidetes L COG COG3666 Transposase and inactivated derivatives - - - - - - - - - - - - DDE_Tnp_1,DDE_Tnp_1_6,DUF772 PHJFGMMN_03766 470145.BACCOP_01684 4.46e-52 166.0 COG1476@1|root,COG1476@2|Bacteria,4NX0K@976|Bacteroidetes,2FSPK@200643|Bacteroidia,4AQYF@815|Bacteroidaceae 976|Bacteroidetes K regulator of the anaerobic catobolism of benzoate BzdR K00891 - - - - - - - - - - - - HTH_3 PHJFGMMN_03767 470145.BACCOP_01685 7.39e-197 557.0 COG3550@1|root,COG3550@2|Bacteria,4NFYY@976|Bacteroidetes,2FP3A@200643|Bacteroidia,4AMRG@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - 2.7.11.1 ko:K07154 - - - - ko00000,ko01000,ko01001,ko02048 - - - Couple_hipA,HipA_C PHJFGMMN_03768 470145.BACCOP_01685 1.04e-51 177.0 COG3550@1|root,COG3550@2|Bacteria,4NFYY@976|Bacteroidetes,2FP3A@200643|Bacteroidia,4AMRG@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - 2.7.11.1 ko:K07154 - - - - ko00000,ko01000,ko01001,ko02048 - - - Couple_hipA,HipA_C PHJFGMMN_03769 763034.HMPREF9446_03243 8.52e-36 133.0 COG3550@1|root,COG3550@2|Bacteria,4NFYY@976|Bacteroidetes,2FP3A@200643|Bacteroidia,4AMRG@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - 2.7.11.1 ko:K07154 - - - - ko00000,ko01000,ko01001,ko02048 - - - Couple_hipA,HipA_C PHJFGMMN_03770 470145.BACCOP_01687 3.37e-49 171.0 COG3550@1|root,COG3550@2|Bacteria,4NFYY@976|Bacteroidetes,2FP3A@200643|Bacteroidia,4AMRG@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - 2.7.11.1 ko:K07154 - - - - ko00000,ko01000,ko01001,ko02048 - - - Couple_hipA,HipA_C PHJFGMMN_03772 242619.PG_0461 5.43e-154 444.0 COG3039@1|root,COG3039@2|Bacteria,4NHF4@976|Bacteroidetes,2FN6F@200643|Bacteroidia,22YR6@171551|Porphyromonadaceae 976|Bacteroidetes L hmm pf01609 - - - ko:K07481 - - - - ko00000 - - - DDE_Tnp_1,DUF772 PHJFGMMN_03773 1349822.NSB1T_07160 8.52e-154 442.0 COG3039@1|root,COG3039@2|Bacteria,4NGW9@976|Bacteroidetes,2FQ99@200643|Bacteroidia,22WBT@171551|Porphyromonadaceae 976|Bacteroidetes L PFAM Transposase domain (DUF772) - - - - - - - - - - - - DDE_Tnp_1_2,DUF772 PHJFGMMN_03774 709991.Odosp_0759 2.77e-126 372.0 COG3039@1|root,COG3039@2|Bacteria,4NGW9@976|Bacteroidetes,2FQ99@200643|Bacteroidia,22WBT@171551|Porphyromonadaceae 976|Bacteroidetes L PFAM Transposase domain (DUF772) - - - - - - - - - - - - DDE_Tnp_1_2,DUF772 PHJFGMMN_03775 999419.HMPREF1077_00103 0.0 2020.0 COG0841@1|root,COG0841@2|Bacteria,4NH0G@976|Bacteroidetes,2FM3G@200643|Bacteroidia,22X2G@171551|Porphyromonadaceae 976|Bacteroidetes V AcrB/AcrD/AcrF family - - - - - - - - - - - - ACR_tran PHJFGMMN_03776 411477.PARMER_03202 0.0 954.0 COG1538@1|root,COG1538@2|Bacteria,4NGXM@976|Bacteroidetes,2FMD9@200643|Bacteroidia,22XFV@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP PHJFGMMN_03777 411477.PARMER_03201 0.0 1937.0 COG0841@1|root,COG0841@2|Bacteria,4NE3H@976|Bacteroidetes,2FN4H@200643|Bacteroidia,22WXN@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran PHJFGMMN_03778 411477.PARMER_03200 5.74e-243 669.0 COG0845@1|root,COG0845@2|Bacteria,4NHJH@976|Bacteroidetes,2FP9C@200643|Bacteroidia,22VUH@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 PHJFGMMN_03780 470145.BACCOP_02021 2.68e-67 209.0 COG1961@1|root,COG1961@2|Bacteria,4NNF6@976|Bacteroidetes,2FQXB@200643|Bacteroidia,4APPX@815|Bacteroidaceae 976|Bacteroidetes L Resolvase, N-terminal domain protein - - - - - - - - - - - - HTH_7,Resolvase PHJFGMMN_03783 203275.BFO_0349 4.34e-64 216.0 COG3391@1|root,COG3391@2|Bacteria,4PAMK@976|Bacteroidetes,2FRF0@200643|Bacteroidia 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 PHJFGMMN_03784 411477.PARMER_02310 3.7e-122 368.0 COG0457@1|root,COG0457@2|Bacteria,4NJEF@976|Bacteroidetes,2FS5G@200643|Bacteroidia,22ZDU@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - PMT_2,TPR_1,TPR_16,TPR_2,TPR_8 PHJFGMMN_03785 1235803.C825_02887 0.000868 43.5 2A0ZC@1|root,30P4M@2|Bacteria,4PBNI@976|Bacteroidetes,2FZ9I@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03786 1123057.P872_22800 6.25e-10 68.6 COG3391@1|root,COG3391@2|Bacteria 2|Bacteria CO amine dehydrogenase activity - - - - - - - - - - - - DUF5128,TolB_like PHJFGMMN_03787 1235803.C825_02887 0.000177 46.2 2A0ZC@1|root,30P4M@2|Bacteria,4PBNI@976|Bacteroidetes,2FZ9I@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03790 411477.PARMER_00486 1.16e-32 123.0 COG0681@1|root,COG0681@2|Bacteria,4NRG2@976|Bacteroidetes,2FTDJ@200643|Bacteroidia,22Y5E@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the peptidase S26 family - - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24,Peptidase_S26 PHJFGMMN_03791 1433126.BN938_1432 1.86e-46 170.0 COG1216@1|root,COG1216@2|Bacteria,4PKWZ@976|Bacteroidetes,2G072@200643|Bacteroidia 976|Bacteroidetes S Pfam:DUF2029 - - - - - - - - - - - - GT87,Glycos_transf_2 PHJFGMMN_03793 435591.BDI_3442 7.21e-71 227.0 2BZEB@1|root,2ZMZD@2|Bacteria,4NMWK@976|Bacteroidetes,2FQNP@200643|Bacteroidia,22XQ3@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1573) - - - - - - - - - - - - DUF1573 PHJFGMMN_03794 1123008.KB905710_gene704 1.69e-34 126.0 COG0681@1|root,COG0681@2|Bacteria,4NRG2@976|Bacteroidetes,2FTDJ@200643|Bacteroidia,22Y5E@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the peptidase S26 family - - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24,Peptidase_S26 PHJFGMMN_03795 929703.KE386491_gene2302 1.13e-54 182.0 COG1215@1|root,COG1215@2|Bacteria,4NQWJ@976|Bacteroidetes 976|Bacteroidetes M Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 PHJFGMMN_03796 411477.PARMER_00402 1.6e-96 283.0 COG3712@1|root,COG3712@2|Bacteria,4NKN5@976|Bacteroidetes,2FP6E@200643|Bacteroidia,22Y39@171551|Porphyromonadaceae 976|Bacteroidetes PT FecR protein - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_03797 470145.BACCOP_02352 4.58e-142 405.0 2DM9D@1|root,328C5@2|Bacteria,4NPRC@976|Bacteroidetes,2FRTC@200643|Bacteroidia,4AMP2@815|Bacteroidaceae 976|Bacteroidetes S COG NOG37815 non supervised orthologous group - - - - - - - - - - - - DDE_Tnp_1 PHJFGMMN_03798 411477.PARMER_00400 1.49e-28 104.0 COG3712@1|root,COG3712@2|Bacteria 2|Bacteria PT iron ion homeostasis - - - - - - - - - - - - DUF4974,FecR PHJFGMMN_03799 435591.BDI_0278 0.0 1866.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,22ZQS@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec PHJFGMMN_03800 435591.BDI_0279 0.0 1029.0 COG1435@1|root,COG1435@2|Bacteria,4NGX8@976|Bacteroidetes,2FPJC@200643|Bacteroidia 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB PHJFGMMN_03801 411477.PARMER_00397 3.9e-212 586.0 COG1082@1|root,COG1082@2|Bacteria,4P0UK@976|Bacteroidetes 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2 PHJFGMMN_03802 411477.PARMER_00396 0.0 889.0 COG0673@1|root,COG0673@2|Bacteria,4NGHJ@976|Bacteroidetes,2FPMK@200643|Bacteroidia,22WUI@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C PHJFGMMN_03803 411477.PARMER_00395 0.0 2162.0 COG1413@1|root,COG1413@2|Bacteria,4NEZ7@976|Bacteroidetes,2FPRF@200643|Bacteroidia,22X0G@171551|Porphyromonadaceae 976|Bacteroidetes C Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080,HEAT_2 PHJFGMMN_03804 445970.ALIPUT_01230 5.16e-34 120.0 2E51N@1|root,32VIN@2|Bacteria,4NSRP@976|Bacteroidetes,2FSCY@200643|Bacteroidia 976|Bacteroidetes S Bacterial mobilisation protein (MobC) - - - - - - - - - - - - MobC PHJFGMMN_03805 226186.BT_p548234 1.13e-137 390.0 COG1961@1|root,COG1961@2|Bacteria,4NIMM@976|Bacteroidetes,2G376@200643|Bacteroidia,4AWAY@815|Bacteroidaceae 976|Bacteroidetes L Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - HTH_7,Resolvase PHJFGMMN_03806 411477.PARMER_00409 1.33e-130 372.0 COG1595@1|root,COG1595@2|Bacteria,4NS12@976|Bacteroidetes,2FQ76@200643|Bacteroidia,230RU@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_03807 470145.BACCOP_01673 2.39e-190 529.0 COG3943@1|root,COG3943@2|Bacteria,4NJE7@976|Bacteroidetes,2FMMY@200643|Bacteroidia,4AMEW@815|Bacteroidaceae 976|Bacteroidetes S COG3943 Virulence protein - - - - - - - - - - - - Virulence_RhuM PHJFGMMN_03808 470145.BACCOP_01674 7.41e-66 200.0 2CJS0@1|root,33V7U@2|Bacteria,4P2F7@976|Bacteroidetes,2FSKG@200643|Bacteroidia,4AR80@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03809 880074.BARVI_09485 5e-15 69.3 arCOG05093@1|root,339N6@2|Bacteria,4NYIM@976|Bacteroidetes,2FVF5@200643|Bacteroidia,22YYW@171551|Porphyromonadaceae 976|Bacteroidetes S Winged helix-turn-helix domain (DUF2582) - - - - - - - - - - - - DUF2582 PHJFGMMN_03814 1122971.BAME01000054_gene4329 4.88e-77 232.0 COG3093@1|root,COG3093@2|Bacteria,4NZIG@976|Bacteroidetes 976|Bacteroidetes K Helix-turn-helix XRE-family like proteins - - - - - - - - - - - - HTH_3 PHJFGMMN_03818 470145.BACCOP_02352 4.58e-142 405.0 2DM9D@1|root,328C5@2|Bacteria,4NPRC@976|Bacteroidetes,2FRTC@200643|Bacteroidia,4AMP2@815|Bacteroidaceae 976|Bacteroidetes S COG NOG37815 non supervised orthologous group - - - - - - - - - - - - DDE_Tnp_1 PHJFGMMN_03819 411477.PARMER_01716 3.65e-250 700.0 COG5492@1|root,COG5492@2|Bacteria,4NJ44@976|Bacteroidetes,2G0H1@200643|Bacteroidia,2323Z@171551|Porphyromonadaceae 976|Bacteroidetes N Bacterial Ig-like domain 2 - - - - - - - - - - - - Big_2 PHJFGMMN_03821 1515615.HQ41_01055 3.11e-209 615.0 COG4774@1|root,COG4774@2|Bacteria,4PKB5@976|Bacteroidetes,2FWNR@200643|Bacteroidia,22Z7N@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - CarbopepD_reg_2,Plug,TonB_dep_Rec PHJFGMMN_03822 742767.HMPREF9456_03057 3.83e-122 373.0 COG3182@1|root,COG3182@2|Bacteria,4NHAP@976|Bacteroidetes,2FPHN@200643|Bacteroidia,22X9T@171551|Porphyromonadaceae 976|Bacteroidetes S PepSY domain protein - - - - - - - - - - - - PepSY_TM PHJFGMMN_03823 999419.HMPREF1077_02706 7.81e-171 483.0 COG4822@1|root,COG4822@2|Bacteria,4NEGU@976|Bacteroidetes,2FNCV@200643|Bacteroidia,22WTQ@171551|Porphyromonadaceae 976|Bacteroidetes H CbiX cbiK - 4.99.1.3 ko:K02190 ko00860,ko01100,map00860,map01100 - R05807 RC01012 ko00000,ko00001,ko01000 - - - CbiK PHJFGMMN_03824 999419.HMPREF1077_00781 0.0 1608.0 COG0574@1|root,COG0745@1|root,COG0574@2|Bacteria,COG0745@2|Bacteria,4NGSQ@976|Bacteroidetes,2FM60@200643|Bacteroidia,22W01@171551|Porphyromonadaceae 976|Bacteroidetes GKT Pyruvate phosphate dikinase, PEP pyruvate binding domain ppsA - - - - - - - - - - - PPDK_N,Response_reg PHJFGMMN_03826 1122992.CBQQ010000007_gene1211 3.58e-49 177.0 COG0592@1|root,COG0592@2|Bacteria,4NESB@976|Bacteroidetes,2FMPF@200643|Bacteroidia 976|Bacteroidetes L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria dnaN - 2.7.7.7 ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_beta,DNA_pol3_beta_2,DNA_pol3_beta_3 PHJFGMMN_03835 547042.BACCOPRO_02412 1.46e-189 532.0 COG0675@1|root,COG0675@2|Bacteria,4PJXW@976|Bacteroidetes,2FTB4@200643|Bacteroidia,4AU3Y@815|Bacteroidaceae 976|Bacteroidetes L Probable transposase - - - - - - - - - - - - HTH_OrfB_IS605,OrfB_IS605,OrfB_Zn_ribbon PHJFGMMN_03836 1121098.HMPREF1534_01140 4.41e-39 133.0 COG0776@1|root,COG0776@2|Bacteria,4NT0D@976|Bacteroidetes,2FU99@200643|Bacteroidia,4ARZ1@815|Bacteroidaceae 976|Bacteroidetes L bacterial (prokaryotic) histone like domain hupA - - ko:K03530 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding PHJFGMMN_03838 1319815.HMPREF0202_02721 2.53e-08 60.8 COG1040@1|root,COG1040@2|Bacteria 2|Bacteria K competence protein - - - - - - - - - - - - Pribosyltran PHJFGMMN_03840 1122978.AUFP01000001_gene1035 3.26e-14 68.9 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation hupB - - ko:K03530 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding PHJFGMMN_03841 679935.Alfi_3141 1.02e-74 232.0 COG3039@1|root,COG3039@2|Bacteria,4NGHT@976|Bacteroidetes,2FNC8@200643|Bacteroidia 976|Bacteroidetes L Transposase IS4 family - - - - - - - - - - - - DDE_Tnp_1 PHJFGMMN_03843 999419.HMPREF1077_00273 8.3e-169 483.0 COG0729@1|root,COG0729@2|Bacteria,4NVBC@976|Bacteroidetes,2FTDT@200643|Bacteroidia,22YG7@171551|Porphyromonadaceae 976|Bacteroidetes M Chaperone of endosialidase - - - - - - - - - - - - Peptidase_S74 PHJFGMMN_03845 1122931.AUAE01000008_gene3999 0.0 2501.0 COG3209@1|root,COG3209@2|Bacteria,4NGJF@976|Bacteroidetes 976|Bacteroidetes M RHS repeat-associated core domain protein - - - - - - - - - - - - RHS_repeat,SpvB,TcdB_toxin_midN,VCBS PHJFGMMN_03847 999419.HMPREF1077_00284 2.06e-27 108.0 COG3637@1|root,COG3637@2|Bacteria,4NQW6@976|Bacteroidetes,2FMZI@200643|Bacteroidia,22YCX@171551|Porphyromonadaceae 976|Bacteroidetes M Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - - - - - - - - - - OMP_b-brl PHJFGMMN_03848 679937.Bcop_1593 8.68e-216 610.0 COG3039@1|root,COG3039@2|Bacteria,4NF00@976|Bacteroidetes,2FVB1@200643|Bacteroidia,4ASJ5@815|Bacteroidaceae 976|Bacteroidetes L PFAM Transposase DDE domain - - - - - - - - - - - - DDE_Tnp_1,DDE_Tnp_1_6,DUF772 PHJFGMMN_03853 357276.EL88_22755 2.68e-81 250.0 COG0338@1|root,COG0338@2|Bacteria,4NFZ2@976|Bacteroidetes,2FP1V@200643|Bacteroidia,4APKN@815|Bacteroidaceae 976|Bacteroidetes H COG0338 Site-specific DNA methylase dam - 2.1.1.72 ko:K06223 ko03430,map03430 - - - ko00000,ko00001,ko01000,ko02048,ko03032,ko03400 - - - MethyltransfD12 PHJFGMMN_03855 679937.Bcop_0874 9.05e-26 115.0 COG2931@1|root,COG2931@2|Bacteria,4PMVZ@976|Bacteroidetes,2G0IR@200643|Bacteroidia,4AV8U@815|Bacteroidaceae 976|Bacteroidetes Q Clostripain family - - - - - - - - - - - - Peptidase_C11 PHJFGMMN_03857 547042.BACCOPRO_02412 2.81e-12 67.4 COG0675@1|root,COG0675@2|Bacteria,4PJXW@976|Bacteroidetes,2FTB4@200643|Bacteroidia,4AU3Y@815|Bacteroidaceae 976|Bacteroidetes L Probable transposase - - - - - - - - - - - - HTH_OrfB_IS605,OrfB_IS605,OrfB_Zn_ribbon PHJFGMMN_03858 1235813.JCM10003_3545 4.62e-298 829.0 COG0827@1|root,COG0827@2|Bacteria 2|Bacteria L DNA restriction-modification system hincIIM - 2.1.1.72 ko:K07317 - - - - ko00000,ko01000,ko02048 - - - Eco57I,N6_Mtase,TaqI_C PHJFGMMN_03859 1235813.JCM10003_3544 0.0 955.0 COG1743@1|root,COG1743@2|Bacteria,4PA3S@976|Bacteroidetes,2FW40@200643|Bacteroidia,4AU0R@815|Bacteroidaceae 976|Bacteroidetes L DNA methylase - - - - - - - - - - - - N6_N4_Mtase PHJFGMMN_03861 435590.BVU_3212 2.43e-125 360.0 COG3637@1|root,COG3637@2|Bacteria,4P1BM@976|Bacteroidetes,2FQBA@200643|Bacteroidia,4AQ8F@815|Bacteroidaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl_2 PHJFGMMN_03862 457424.BFAG_00473 0.0 870.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMCJ@200643|Bacteroidia,4AMTX@815|Bacteroidaceae 976|Bacteroidetes T acetoacetate metabolism regulatory protein AtoC K07714 zraR - - ko:K07713 ko02020,map02020 M00499 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat PHJFGMMN_03863 445970.ALIPUT_00461 3e-296 809.0 COG0642@1|root,COG0745@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,4P0GH@976|Bacteroidetes,2FR0Z@200643|Bacteroidia 976|Bacteroidetes T ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - - - - - - - - - - HATPase_c,Response_reg PHJFGMMN_03864 445970.ALIPUT_00462 1.27e-221 609.0 COG1533@1|root,COG1533@2|Bacteria,4NE62@976|Bacteroidetes,2FP03@200643|Bacteroidia 976|Bacteroidetes L radical SAM domain protein - - - - - - - - - - - - Radical_SAM PHJFGMMN_03865 445970.ALIPUT_00463 4.96e-159 445.0 COG4422@1|root,COG4422@2|Bacteria,4P2ZI@976|Bacteroidetes,2FRRH@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - DUF5131 PHJFGMMN_03866 445970.ALIPUT_00465 2.41e-189 525.0 COG2220@1|root,COG2220@2|Bacteria,4NR14@976|Bacteroidetes,2FNB9@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 yddR - - - - - - - - - - - Lactamase_B_2,Lactamase_B_3 PHJFGMMN_03867 445970.ALIPUT_00466 8.91e-217 598.0 COG2207@1|root,COG2207@2|Bacteria,4NJYE@976|Bacteroidetes,2FQ6S@200643|Bacteroidia 976|Bacteroidetes K transcriptional regulator (AraC family) - - - ko:K18954 - - - - ko00000,ko03000 - - - AraC_binding,HTH_18 PHJFGMMN_03868 445970.ALIPUT_00468 5.5e-162 452.0 COG2207@1|root,COG2207@2|Bacteria,4P0B0@976|Bacteroidetes,2FQHM@200643|Bacteroidia 976|Bacteroidetes K methylphosphotriester-DNA alkyltransferase (AraC XylS family) K00567 - - - - - - - - - - - - HTH_18 PHJFGMMN_03869 445970.ALIPUT_00469 3.97e-228 628.0 COG3843@1|root,COG3843@2|Bacteria,4NH77@976|Bacteroidetes,2FM27@200643|Bacteroidia,22V9E@171550|Rikenellaceae 976|Bacteroidetes U Relaxase mobilization nuclease domain protein - - - - - - - - - - - - Relaxase PHJFGMMN_03870 445970.ALIPUT_00470 2.56e-83 246.0 2E51N@1|root,32ZV1@2|Bacteria,4NW1B@976|Bacteroidetes,2FTRR@200643|Bacteroidia,22VJD@171550|Rikenellaceae 976|Bacteroidetes S Bacterial mobilisation protein (MobC) - - - - - - - - - - - - MobC PHJFGMMN_03871 457424.BFAG_00463 1.19e-232 639.0 COG0358@1|root,COG0358@2|Bacteria,4NH5X@976|Bacteroidetes,2FPHT@200643|Bacteroidia,4AKC7@815|Bacteroidaceae 976|Bacteroidetes L Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - Toprim_2,zf-CHC2 PHJFGMMN_03872 445970.ALIPUT_02069 5.44e-299 814.0 COG3378@1|root,COG3378@2|Bacteria,4NE1A@976|Bacteroidetes,2FPTD@200643|Bacteroidia,22V3C@171550|Rikenellaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_03873 445970.ALIPUT_02067 7.13e-87 255.0 COG3943@1|root,COG3943@2|Bacteria,4NQ20@976|Bacteroidetes,2FS6A@200643|Bacteroidia 976|Bacteroidetes S COG3943, virulence protein - - - - - - - - - - - - - PHJFGMMN_03874 445970.ALIPUT_02066 4.05e-36 134.0 COG0582@1|root,COG0582@2|Bacteria,4NVIT@976|Bacteroidetes,2G080@200643|Bacteroidia 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_03875 762968.HMPREF9441_02516 1.33e-262 723.0 COG4974@1|root,COG4974@2|Bacteria,4PKFN@976|Bacteroidetes,2FMCG@200643|Bacteroidia 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_03876 880074.BARVI_03740 1.26e-252 697.0 COG4974@1|root,COG4974@2|Bacteria,4NIFX@976|Bacteroidetes,2G3FF@200643|Bacteroidia,22WII@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_03877 742817.HMPREF9449_01780 1.12e-37 130.0 2FCR5@1|root,344UB@2|Bacteria,4P587@976|Bacteroidetes,2FTZI@200643|Bacteroidia 976|Bacteroidetes S Phage derived protein Gp49-like (DUF891) - - - - - - - - - - - - Gp49 PHJFGMMN_03878 1002367.HMPREF0673_02360 9.96e-34 119.0 COG3620@1|root,COG3620@2|Bacteria,4NVN9@976|Bacteroidetes,2FTUJ@200643|Bacteroidia 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_19,HTH_3 PHJFGMMN_03880 411479.BACUNI_02833 5.63e-180 501.0 COG1484@1|root,COG1484@2|Bacteria,4NFE0@976|Bacteroidetes,2FPQ9@200643|Bacteroidia,4AP6A@815|Bacteroidaceae 976|Bacteroidetes L COG COG1484 DNA replication protein - - - - - - - - - - - - IstB_IS21 PHJFGMMN_03881 411479.BACUNI_02834 0.0 1046.0 COG4584@1|root,COG4584@2|Bacteria,4NEY6@976|Bacteroidetes,2FMHY@200643|Bacteroidia,4APGX@815|Bacteroidaceae 976|Bacteroidetes L Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - HTH_11,rve PHJFGMMN_03882 226186.BT_3327 4.15e-12 69.3 COG2865@1|root,COG2865@2|Bacteria,4NGFJ@976|Bacteroidetes,2FPKR@200643|Bacteroidia,4AMQV@815|Bacteroidaceae 976|Bacteroidetes K Divergent AAA domain protein - - 3.6.4.12 ko:K03655 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - AlbA_2,HATPase_c_4 PHJFGMMN_03883 547042.BACCOPRO_01351 6.36e-29 104.0 COG1476@1|root,COG1476@2|Bacteria,4NV6T@976|Bacteroidetes,2FUIJ@200643|Bacteroidia,4AS4K@815|Bacteroidaceae 976|Bacteroidetes K DNA-binding helix-turn-helix protein - - - - - - - - - - - - HTH_26,HTH_3 PHJFGMMN_03884 484018.BACPLE_01378 0.0 1777.0 COG0553@1|root,COG3886@1|root,COG0553@2|Bacteria,COG3886@2|Bacteria,4NH3B@976|Bacteroidetes,2FMFX@200643|Bacteroidia,4AM5A@815|Bacteroidaceae 976|Bacteroidetes L domain protein - - - - - - - - - - - - Helicase_C,PLDc_2,ResIII,SNF2_N PHJFGMMN_03885 763034.HMPREF9446_02533 0.0 1663.0 COG0827@1|root,COG1002@1|root,COG0827@2|Bacteria,COG1002@2|Bacteria,4NEHR@976|Bacteroidetes,2FQ1D@200643|Bacteroidia,4APTH@815|Bacteroidaceae 976|Bacteroidetes LV COG COG1002 Type II restriction enzyme, methylase subunits - - - - - - - - - - - - Eco57I,N6_Mtase,TaqI_C PHJFGMMN_03886 667015.Bacsa_0034 2.84e-231 662.0 COG1195@1|root,COG1195@2|Bacteria,4NNJ6@976|Bacteroidetes,2FTYD@200643|Bacteroidia,4AR1X@815|Bacteroidaceae 976|Bacteroidetes L AAA domain - - - - - - - - - - - - AAA_23,ABC_tran,SMC_N PHJFGMMN_03887 658086.HMPREF0994_01850 4.28e-19 85.5 2E2Q9@1|root,32XT3@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - HNH_5 PHJFGMMN_03889 1121097.JCM15093_2065 2.58e-229 660.0 COG0454@1|root,COG0456@2|Bacteria,4NN9T@976|Bacteroidetes 976|Bacteroidetes K acetyltransferase - - - - - - - - - - - - Acetyltransf_10 PHJFGMMN_03890 1535287.JP74_04420 3.81e-18 85.5 COG1396@1|root,COG4933@1|root,COG1396@2|Bacteria,COG4933@2|Bacteria,1N2JZ@1224|Proteobacteria,2U7T3@28211|Alphaproteobacteria 28211|Alphaproteobacteria K sequence-specific DNA binding - - - - - - - - - - - - ASCH,HTH_3,HTH_31 PHJFGMMN_03891 435590.BVU_0090 3.67e-212 589.0 COG3943@1|root,COG3943@2|Bacteria,4NEGN@976|Bacteroidetes,2FM81@200643|Bacteroidia,4AP0J@815|Bacteroidaceae 976|Bacteroidetes S COG3943 Virulence protein - - - - - - - - - - - - Virulence_RhuM PHJFGMMN_03892 483215.BACFIN_07132 3.38e-293 800.0 COG3328@1|root,COG3328@2|Bacteria,4NFQS@976|Bacteroidetes,2FM5A@200643|Bacteroidia,4AMKB@815|Bacteroidaceae 976|Bacteroidetes L COG3328 Transposase and inactivated derivatives - - - - - - - - - - - - Transposase_mut PHJFGMMN_03893 709991.Odosp_1685 4.28e-267 743.0 COG5263@1|root,COG5263@2|Bacteria,4PMUI@976|Bacteroidetes,2FQQY@200643|Bacteroidia,2326E@171551|Porphyromonadaceae 976|Bacteroidetes S The GLUG motif - - - - - - - - - - - - Glug,Mfa_like_1 PHJFGMMN_03894 709991.Odosp_1686 0.0 989.0 COG5492@1|root,COG5492@2|Bacteria,4NIA5@976|Bacteroidetes,2G0Z6@200643|Bacteroidia 976|Bacteroidetes N Fimbrillin-like - - - - - - - - - - - - Glug,Mfa_like_1 PHJFGMMN_03895 709991.Odosp_1687 0.0 900.0 COG1479@1|root,COG1479@2|Bacteria 2|Bacteria U Protein of unknown function DUF262 - - - - - - - - - - - - AAA_5,DUF1524,DUF262,DUF4357 PHJFGMMN_03896 1203611.KB894558_gene1149 4.28e-197 548.0 2DKZS@1|root,311B0@2|Bacteria,4NQ1B@976|Bacteroidetes,2FQIA@200643|Bacteroidia 976|Bacteroidetes S Fimbrillin-like - - - - - - - - - - - - DUF4960,Mfa_like_1 PHJFGMMN_03897 709991.Odosp_1691 4.75e-198 550.0 2B8D4@1|root,321N1@2|Bacteria,4NRJT@976|Bacteroidetes,2FQ9N@200643|Bacteroidia,2300S@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - Mfa2 PHJFGMMN_03898 709991.Odosp_1692 3.73e-229 635.0 COG2885@1|root,COG2885@2|Bacteria,4NZVR@976|Bacteroidetes,2FQBU@200643|Bacteroidia,22YEB@171551|Porphyromonadaceae 976|Bacteroidetes M Protein of unknown function (DUF3575) - - - - - - - - - - - - DUF3575,OmpA PHJFGMMN_03899 411479.BACUNI_03388 1.49e-244 674.0 COG2207@1|root,COG2207@2|Bacteria,4NWJN@976|Bacteroidetes,2FQFB@200643|Bacteroidia,4ANFH@815|Bacteroidaceae 976|Bacteroidetes K Psort location CytoplasmicMembrane, score - - - - - - - - - - - - HTH_18 PHJFGMMN_03900 742817.HMPREF9449_00573 9.58e-173 483.0 COG0476@1|root,COG0476@2|Bacteria,4NHIM@976|Bacteroidetes,2FNSP@200643|Bacteroidia,22ZJ6@171551|Porphyromonadaceae 976|Bacteroidetes H ThiF family - - - - - - - - - - - - ThiF PHJFGMMN_03901 742817.HMPREF9449_00574 3.02e-141 401.0 28M9D@1|root,2ZANB@2|Bacteria,4NIRS@976|Bacteroidetes,2FQ6N@200643|Bacteroidia,22ZEY@171551|Porphyromonadaceae 976|Bacteroidetes S Prokaryotic E2 family D - - - - - - - - - - - - Prok-E2_D PHJFGMMN_03902 357276.EL88_13560 9.73e-180 509.0 2EXAN@1|root,33QMB@2|Bacteria,4P19W@976|Bacteroidetes,2FQQ3@200643|Bacteroidia,4ANC1@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_03903 742817.HMPREF9449_00576 1.19e-41 137.0 2EHB8@1|root,33B33@2|Bacteria,4NX7T@976|Bacteroidetes,2FUTY@200643|Bacteroidia,230UB@171551|Porphyromonadaceae 976|Bacteroidetes S Prokaryotic Ubiquitin - - - - - - - - - - - - Prok_Ub PHJFGMMN_03904 742817.HMPREF9449_00577 5.45e-96 294.0 28I8H@1|root,2Z8BB@2|Bacteria,4NGRI@976|Bacteroidetes,2FQ9V@200643|Bacteroidia,22ZPY@171551|Porphyromonadaceae 976|Bacteroidetes S PRTRC system protein E - - - - - - - - - - - - - PHJFGMMN_03905 742817.HMPREF9449_00578 3.9e-26 97.8 2EPQF@1|root,33HB0@2|Bacteria,4NYRF@976|Bacteroidetes,2FV7K@200643|Bacteroidia,2319D@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03907 1268240.ATFI01000003_gene5213 0.0 1038.0 COG0550@1|root,COG0550@2|Bacteria,4NE6R@976|Bacteroidetes,2FMKQ@200643|Bacteroidia,4AKJT@815|Bacteroidaceae 976|Bacteroidetes L COG0550 Topoisomerase IA - - 5.99.1.2 ko:K03169 - - - - ko00000,ko01000,ko03032 - - - Topoisom_bac,Toprim,Toprim_Crpt PHJFGMMN_03908 1122931.AUAE01000043_gene486 2.86e-37 127.0 2E1ZS@1|root,32X85@2|Bacteria,4NU3Z@976|Bacteroidetes,2FTSN@200643|Bacteroidia,230U8@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF4099) - - - - - - - - - - - - DUF4099 PHJFGMMN_03909 357276.EL88_13600 0.0 974.0 2CI0Q@1|root,2Z86V@2|Bacteria,4NEAY@976|Bacteroidetes,2FN31@200643|Bacteroidia,4AK8X@815|Bacteroidaceae 976|Bacteroidetes S COG NOG09947 non supervised orthologous group - - - - - - - - - - - - DUF3945,DUF4099 PHJFGMMN_03910 226186.BT_p548217 7.84e-31 112.0 COG1476@1|root,COG1476@2|Bacteria,4PB7E@976|Bacteroidetes,2FYJW@200643|Bacteroidia,4AUAY@815|Bacteroidaceae 976|Bacteroidetes K TRANSCRIPTIONal - - - - - - - - - - - - - PHJFGMMN_03911 226186.BT_p548218 1.7e-114 334.0 COG2132@1|root,COG2132@2|Bacteria,4P25S@976|Bacteroidetes,2FQQJ@200643|Bacteroidia,4AT71@815|Bacteroidaceae 976|Bacteroidetes Q Multicopper oxidase - - - - - - - - - - - - - PHJFGMMN_03912 483215.BACFIN_08231 5.75e-114 327.0 2CHJE@1|root,33QQY@2|Bacteria,4P0P8@976|Bacteroidetes,2FRK7@200643|Bacteroidia,4ATB7@815|Bacteroidaceae 976|Bacteroidetes S Conjugative transposon protein TraO - - - - - - - - - - - - TraO PHJFGMMN_03913 679935.Alfi_3120 2.63e-104 301.0 28MRD@1|root,2ZB00@2|Bacteria,4NJ4Q@976|Bacteroidetes,2FN1V@200643|Bacteroidia 976|Bacteroidetes S PLAT/LH2 and C2-like Ca2+-binding lipoprotein - - - - - - - - - - - - PLCC PHJFGMMN_03914 470145.BACCOP_01680 1.23e-220 612.0 COG2771@1|root,COG2771@2|Bacteria,4P0HN@976|Bacteroidetes,2FQ4D@200643|Bacteroidia,4AN5Q@815|Bacteroidaceae 976|Bacteroidetes K Psort location CytoplasmicMembrane, score 9.46 uhpA - - - - - - - - - - - GerE PHJFGMMN_03916 709991.Odosp_1705 8.51e-310 842.0 COG2885@1|root,COG2885@2|Bacteria,4P09S@976|Bacteroidetes,2FQ2Y@200643|Bacteroidia,22ZYR@171551|Porphyromonadaceae 976|Bacteroidetes M Protein of unknown function (DUF3575) - - - - - - - - - - - - DUF3575 PHJFGMMN_03917 445970.ALIPUT_02464 2.14e-232 638.0 2F06K@1|root,33TA6@2|Bacteria,4P1ND@976|Bacteroidetes,2FN1J@200643|Bacteroidia 976|Bacteroidetes S COG NOG26135 non supervised orthologous group - - - - - - - - - - - - DUF5119 PHJFGMMN_03918 445970.ALIPUT_02463 1.72e-274 750.0 2DBRN@1|root,2ZAMV@2|Bacteria,4NKDQ@976|Bacteroidetes,2FNA3@200643|Bacteroidia,22VNV@171550|Rikenellaceae 976|Bacteroidetes S Fimbrillin-like - - - - - - - - - - - - Mfa_like_1 PHJFGMMN_03919 445970.ALIPUT_02462 2.87e-52 164.0 2AQ8G@1|root,31FEA@2|Bacteria,4NRMW@976|Bacteroidetes,2FTBH@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03920 483215.BACFIN_08223 4.63e-175 488.0 COG1192@1|root,COG1192@2|Bacteria,4NGFE@976|Bacteroidetes,2FMB5@200643|Bacteroidia,4AM2M@815|Bacteroidaceae 976|Bacteroidetes D CobQ CobB MinD ParA nucleotide binding domain protein - - - ko:K03496 - - - - ko00000,ko03036,ko04812 - - - AAA_31 PHJFGMMN_03921 226186.BT_p548232 4.81e-80 236.0 2CJS0@1|root,33V7U@2|Bacteria,4P2F7@976|Bacteroidetes,2FSKG@200643|Bacteroidia,4AR80@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03922 445970.ALIPUT_01229 3.58e-237 651.0 COG3943@1|root,COG3943@2|Bacteria,4NJE7@976|Bacteroidetes,2FMMY@200643|Bacteroidia,22VK3@171550|Rikenellaceae 976|Bacteroidetes S COG3943 Virulence protein - - - - - - - - - - - - Virulence_RhuM PHJFGMMN_03923 411477.PARMER_04465 8.55e-26 102.0 2DMKQ@1|root,32S8K@2|Bacteria,4NTNQ@976|Bacteroidetes,2FRHC@200643|Bacteroidia,231QD@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3408) - - - - - - - - - - - - DUF3408 PHJFGMMN_03924 1203611.KB894559_gene27 3.51e-68 206.0 COG0789@1|root,COG0789@2|Bacteria,4NSUY@976|Bacteroidetes,2FT8V@200643|Bacteroidia,22VJV@171550|Rikenellaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_17 PHJFGMMN_03925 1121098.HMPREF1534_03640 3.6e-67 204.0 2DVM5@1|root,33WBN@2|Bacteria,4P37Q@976|Bacteroidetes,2FSVP@200643|Bacteroidia,4AQZ6@815|Bacteroidaceae 976|Bacteroidetes S MerR HTH family regulatory protein - - - - - - - - - - - - HTH_17 PHJFGMMN_03926 1203611.KB894559_gene25 3.39e-90 264.0 2C603@1|root,3310V@2|Bacteria,4NWY2@976|Bacteroidetes,2FS09@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_03927 226186.BT_1133 2.9e-134 380.0 COG1595@1|root,COG1595@2|Bacteria,4NTTR@976|Bacteroidetes,2FNHN@200643|Bacteroidia,4APT6@815|Bacteroidaceae 976|Bacteroidetes K Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_03928 445970.ALIPUT_01239 8.43e-301 820.0 COG0582@1|root,COG0582@2|Bacteria,4NDZJ@976|Bacteroidetes,2FM4Q@200643|Bacteroidia 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_03932 1122971.BAME01000010_gene1296 6.99e-66 210.0 COG0810@1|root,COG0810@2|Bacteria,4NMG7@976|Bacteroidetes,2FPKW@200643|Bacteroidia,22XTD@171551|Porphyromonadaceae 976|Bacteroidetes M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - ko:K03832 - - - - ko00000,ko02000 2.C.1.1 - - TonB_C PHJFGMMN_03936 1236514.BAKL01000012_gene1381 2.4e-46 157.0 2985A@1|root,2ZVB7@2|Bacteria,4NNTB@976|Bacteroidetes,2FPUX@200643|Bacteroidia,4AN5F@815|Bacteroidaceae 976|Bacteroidetes S COG NOG14445 non supervised orthologous group - - - - - - - - - - - - DUF4494 PHJFGMMN_03938 1077285.AGDG01000027_gene1668 7.38e-22 94.4 COG0526@1|root,COG0526@2|Bacteria,4NW7T@976|Bacteroidetes,2FTAZ@200643|Bacteroidia,4AR9R@815|Bacteroidaceae 976|Bacteroidetes CO Redoxin - - - - - - - - - - - - AhpC-TSA,Redoxin PHJFGMMN_03943 140626.JHWB01000016_gene2524 4.67e-13 78.2 COG0550@1|root,COG0551@1|root,COG0550@2|Bacteria,COG0551@2|Bacteria,1TPJD@1239|Firmicutes,24810@186801|Clostridia 186801|Clostridia L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone traI - 5.99.1.2 ko:K03169 - - - - ko00000,ko01000,ko03032 - - - Topoisom_bac,Toprim,Toprim_Crpt PHJFGMMN_03944 470145.BACCOP_02352 4.58e-142 405.0 2DM9D@1|root,328C5@2|Bacteria,4NPRC@976|Bacteroidetes,2FRTC@200643|Bacteroidia,4AMP2@815|Bacteroidaceae 976|Bacteroidetes S COG NOG37815 non supervised orthologous group - - - - - - - - - - - - DDE_Tnp_1 PHJFGMMN_03945 411477.PARMER_00774 0.0 1199.0 COG0443@1|root,COG0443@2|Bacteria,4NERF@976|Bacteroidetes,2FMNH@200643|Bacteroidia,22VY9@171551|Porphyromonadaceae 976|Bacteroidetes O Heat shock 70 kDa protein dnaK - - ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 - - - ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 1.A.33.1 - - HSP70 PHJFGMMN_03946 411477.PARMER_00773 5.89e-197 545.0 COG0388@1|root,COG0388@2|Bacteria,4NE37@976|Bacteroidetes,2FPG4@200643|Bacteroidia,22XFQ@171551|Porphyromonadaceae 976|Bacteroidetes S Hydrolase, carbon-nitrogen family ramA_1 - 3.5.1.3 ko:K13566 ko00250,map00250 - R00269,R00348 RC00010 ko00000,ko00001,ko01000 - - - CN_hydrolase PHJFGMMN_03947 411477.PARMER_00772 1.19e-135 383.0 COG0204@1|root,COG0204@2|Bacteria,4NNG7@976|Bacteroidetes,2FM7Q@200643|Bacteroidia,22Y0H@171551|Porphyromonadaceae 976|Bacteroidetes I Acyltransferase - - - - - - - - - - - - Acyltransferase PHJFGMMN_03948 411477.PARMER_00771 4.49e-60 185.0 2CJP4@1|root,33FB6@2|Bacteria,4NWNA@976|Bacteroidetes,2FUPW@200643|Bacteroidia,22YY0@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG23371 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_03949 411477.PARMER_00770 0.0 1122.0 COG0297@1|root,COG0297@2|Bacteria,4PKEP@976|Bacteroidetes,2FNMM@200643|Bacteroidia,22W3T@171551|Porphyromonadaceae 976|Bacteroidetes G starch synthase - - 2.4.1.11 ko:K00693 ko00500,ko01100,ko04151,ko04152,ko04910,ko04922,ko04931,map00500,map01100,map04151,map04152,map04910,map04922,map04931 - R00292 RC00005 ko00000,ko00001,ko01000,ko01003 - GT3 - Glycogen_syn PHJFGMMN_03950 411477.PARMER_00769 0.0 1761.0 COG0058@1|root,COG0058@2|Bacteria,4NGR1@976|Bacteroidetes,2FNN5@200643|Bacteroidia,22WPC@171551|Porphyromonadaceae 976|Bacteroidetes G alpha-glucan phosphorylase glgP - 2.4.1.1,2.4.1.11,2.4.1.8 ko:K00688,ko:K00691,ko:K16153 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 - R00292,R01555,R02111 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003 - GH65,GT3,GT35 - DUF3417,Glycogen_syn,Phosphorylase PHJFGMMN_03951 411477.PARMER_00768 0.0 927.0 COG2067@1|root,COG2067@2|Bacteria,4NKM1@976|Bacteroidetes,2FPD4@200643|Bacteroidia,22XAC@171551|Porphyromonadaceae 976|Bacteroidetes I Psort location OuterMembrane, score 9.52 - - - ko:K06076 - - - - ko00000,ko02000 1.B.9 - - OMP_b-brl PHJFGMMN_03952 411477.PARMER_00767 1.87e-200 555.0 COG0603@1|root,COG0603@2|Bacteria,4NGCY@976|Bacteroidetes,2FM6W@200643|Bacteroidia,22X8P@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) queC - 6.3.4.20 ko:K06920 ko00790,ko01100,map00790,map01100 - R09978 RC00959 ko00000,ko00001,ko01000,ko03016 - - - QueC PHJFGMMN_03953 411477.PARMER_00766 2.71e-117 334.0 COG0780@1|root,COG0780@2|Bacteria,4NMSC@976|Bacteroidetes,2FP7K@200643|Bacteroidia,22XP3@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) queF - 1.7.1.13 ko:K09457 ko00790,ko01100,map00790,map01100 - R07605 RC01875 ko00000,ko00001,ko01000,ko03016 - - - QueF PHJFGMMN_03954 411477.PARMER_00765 8.45e-195 539.0 COG2133@1|root,COG2133@2|Bacteria,4NGMS@976|Bacteroidetes,2FQQN@200643|Bacteroidia,231G5@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 PHJFGMMN_03955 411477.PARMER_00764 0.0 1186.0 COG2812@1|root,COG2812@2|Bacteria,4NE8A@976|Bacteroidetes,2FN52@200643|Bacteroidia,22W32@171551|Porphyromonadaceae 976|Bacteroidetes H DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity dnaX - 2.7.7.7 ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta2,DNA_pol3_gamma3 PHJFGMMN_03956 411477.PARMER_00763 3.41e-65 198.0 COG2919@1|root,COG2919@2|Bacteria,4NURQ@976|Bacteroidetes,2FTC0@200643|Bacteroidia,22YWW@171551|Porphyromonadaceae 976|Bacteroidetes D Septum formation initiator - - - - - - - - - - - - DivIC PHJFGMMN_03957 411477.PARMER_00762 4.84e-71 214.0 2EAHC@1|root,334KJ@2|Bacteria,4NWVD@976|Bacteroidetes,2FUJ8@200643|Bacteroidia,22YTX@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - PHJFGMMN_03958 411477.PARMER_00761 0.0 1568.0 COG4206@1|root,COG4206@2|Bacteria,4NE1W@976|Bacteroidetes,2FME0@200643|Bacteroidia,22XAS@171551|Porphyromonadaceae 976|Bacteroidetes H TonB-dependent Receptor Plug Domain - - - - - - - - - - - - CarbopepD_reg_2,OMP_b-brl_3,Plug,TonB_dep_Rec PHJFGMMN_03959 411477.PARMER_00760 0.0 952.0 COG4166@1|root,COG4166@2|Bacteria,4NJ4K@976|Bacteroidetes,2G060@200643|Bacteroidia,22ZN6@171551|Porphyromonadaceae 976|Bacteroidetes E Domain of unknown function (DUF4374) - - - - - - - - - - - - DUF4374 PHJFGMMN_03960 411477.PARMER_00759 1.7e-198 550.0 COG2819@1|root,COG2819@2|Bacteria,4NN8M@976|Bacteroidetes,2FPCR@200643|Bacteroidia,2316N@171551|Porphyromonadaceae 976|Bacteroidetes S Putative esterase - - - ko:K07017 - - - - ko00000 - - - Esterase PHJFGMMN_03961 411477.PARMER_00758 5.21e-277 756.0 COG3182@1|root,COG3182@2|Bacteria,4NEXX@976|Bacteroidetes,2FPEY@200643|Bacteroidia,22WIV@171551|Porphyromonadaceae 976|Bacteroidetes S PepSY-associated TM region piuB - - - - - - - - - - - PepSY,PepSY_TM PHJFGMMN_03962 411477.PARMER_00757 2.71e-130 371.0 COG2825@1|root,COG2825@2|Bacteria,4NQGG@976|Bacteroidetes,2FPTR@200643|Bacteroidia,22Y4J@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein (OmpH-like) - - - ko:K06142 - - - - ko00000 - - - OmpH PHJFGMMN_03963 411477.PARMER_00755 0.0 983.0 COG2195@1|root,COG2195@2|Bacteria,4NG8I@976|Bacteroidetes,2FNVV@200643|Bacteroidia,22VWR@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the hydrolysis of Xaa-His dipeptides - - - ko:K01270 ko00480,ko01100,map00480,map01100 - R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 - - - M20_dimer,Peptidase_M20 PHJFGMMN_03964 411477.PARMER_00754 0.0 995.0 2DB82@1|root,2Z7PX@2|Bacteria,4NEW5@976|Bacteroidetes,2FMDV@200643|Bacteroidia,22W0B@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - Beta_helix PHJFGMMN_03965 411477.PARMER_00753 1.86e-270 738.0 COG2374@1|root,COG2374@2|Bacteria,4NEHG@976|Bacteroidetes,2FNH4@200643|Bacteroidia,22WK4@171551|Porphyromonadaceae 976|Bacteroidetes S endonuclease - - - - - - - - - - - - Exo_endo_phos PHJFGMMN_03966 411477.PARMER_00752 0.0 1132.0 COG0739@1|root,COG0739@2|Bacteria,4NED7@976|Bacteroidetes,2FP3N@200643|Bacteroidia,22XF3@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family M23 - - - - - - - - - - - - Peptidase_M23 PHJFGMMN_03967 411477.PARMER_00751 0.0 1141.0 COG1109@1|root,COG1109@2|Bacteria,4NFU7@976|Bacteroidetes,2FM0A@200643|Bacteroidia,22WB1@171551|Porphyromonadaceae 976|Bacteroidetes G Phosphoglucomutase pgcA - 5.4.2.2 ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 M00549 R00959,R01057,R08639 RC00408 ko00000,ko00001,ko00002,ko01000 - - - PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV PHJFGMMN_03968 411477.PARMER_00750 2.71e-105 306.0 COG0295@1|root,COG0295@2|Bacteria,4NQED@976|Bacteroidetes,2FTBD@200643|Bacteroidia,22Y69@171551|Porphyromonadaceae 976|Bacteroidetes F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis cdd - 3.5.4.5 ko:K01489 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R01878,R02485,R08221 RC00074,RC00514 ko00000,ko00001,ko01000 - - - dCMP_cyt_deam_1 PHJFGMMN_03969 411477.PARMER_00748 8.6e-220 605.0 COG1388@1|root,COG1705@1|root,COG1388@2|Bacteria,COG1705@2|Bacteria,4NEER@976|Bacteroidetes,2FM02@200643|Bacteroidia,22W5G@171551|Porphyromonadaceae 976|Bacteroidetes MNU N-acetylmuramoyl-L-alanine amidase lytG - - - - - - - - - - - Glucosaminidase,LysM PHJFGMMN_03970 411477.PARMER_00747 1.53e-288 787.0 COG0150@1|root,COG0150@2|Bacteria,4NE4E@976|Bacteroidetes,2FM0G@200643|Bacteroidia,22VWI@171551|Porphyromonadaceae 976|Bacteroidetes F Phosphoribosylformylglycinamidine cyclo-ligase purM - 6.3.3.1 ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04208 RC01100 ko00000,ko00001,ko00002,ko01000 - - - AIRS,AIRS_C PHJFGMMN_03971 999419.HMPREF1077_00577 3.46e-265 726.0 COG0216@1|root,COG0216@2|Bacteria,4NF72@976|Bacteroidetes,2FNKW@200643|Bacteroidia,22VUT@171551|Porphyromonadaceae 976|Bacteroidetes J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA prfA - - ko:K02835 - - - - ko00000,ko03012 - - - PCRF,RF-1 PHJFGMMN_03972 411477.PARMER_00745 2.07e-201 557.0 COG0284@1|root,COG0284@2|Bacteria,4NE12@976|Bacteroidetes,2FPJM@200643|Bacteroidia,22W6B@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the OMP decarboxylase family. Type 2 subfamily pyrF GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 ko:K01591 ko00240,ko01100,map00240,map01100 M00051 R00965 RC00409 ko00000,ko00001,ko00002,ko01000 - - - OMPdecase PHJFGMMN_03973 411477.PARMER_00744 1.4e-177 503.0 COG1044@1|root,COG1044@2|Bacteria,4NE5G@976|Bacteroidetes,2FMZE@200643|Bacteroidia,22WC5@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxD - 2.3.1.191 ko:K02536 ko00540,ko01100,map00540,map01100 M00060 R04550 RC00039,RC00166 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Hexapep,Hexapep_2,LpxD PHJFGMMN_03974 411477.PARMER_00743 0.0 908.0 COG0764@1|root,COG0774@1|root,COG0764@2|Bacteria,COG0774@2|Bacteria,4NEJ3@976|Bacteroidetes,2FM6X@200643|Bacteroidia,22X7C@171551|Porphyromonadaceae 976|Bacteroidetes IM Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis fabZ - 3.5.1.108,4.2.1.59 ko:K16363 ko00061,ko00540,ko01100,ko01212,map00061,map00540,map01100,map01212 M00060,M00083 R04428,R04535,R04537,R04544,R04568,R04587,R04954,R04965 RC00166,RC00300,RC00831,RC01095 ko00000,ko00001,ko00002,ko01000,ko01004,ko01005 - - - FabA,LpxC PHJFGMMN_03975 411477.PARMER_00742 3.3e-152 431.0 COG1043@1|root,COG1043@2|Bacteria,4NEBA@976|Bacteroidetes,2FKYH@200643|Bacteroidia,22WE5@171551|Porphyromonadaceae 976|Bacteroidetes M Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxA - 2.3.1.129 ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 M00060 R04567 RC00039,RC00055 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Acetyltransf_11,Hexapep PHJFGMMN_03976 411477.PARMER_00740 3.12e-129 367.0 29CCT@1|root,2ZZB9@2|Bacteria,4NM9K@976|Bacteroidetes,2FNRJ@200643|Bacteroidia,22Y1R@171551|Porphyromonadaceae 976|Bacteroidetes S Plasmid pRiA4b ORF-3-like protein - - - - - - - - - - - - PRiA4_ORF3 PHJFGMMN_03977 411477.PARMER_00739 2.47e-220 607.0 COG0324@1|root,COG0324@2|Bacteria,4NEAE@976|Bacteroidetes,2FNES@200643|Bacteroidia,22WDD@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) miaA GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 - R01122 RC02820 ko00000,ko00001,ko01000,ko01006,ko03016 - - - IPPT PHJFGMMN_03978 411477.PARMER_00738 1.53e-85 251.0 COG3169@1|root,COG3169@2|Bacteria,4NQH4@976|Bacteroidetes,2FT44@200643|Bacteroidia,22Y4C@171551|Porphyromonadaceae 976|Bacteroidetes S Putative member of DMT superfamily (DUF486) - - - ko:K09922 - - - - ko00000 - - - DMT_6 PHJFGMMN_03979 411477.PARMER_00737 2.92e-182 506.0 COG0037@1|root,COG0037@2|Bacteria,4NIQB@976|Bacteroidetes,2FP5K@200643|Bacteroidia,22X1Q@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the TtcA family ttcA - - ko:K14058 - - - - ko00000,ko03016 - - - ATP_bind_3 PHJFGMMN_03980 411477.PARMER_00736 0.0 983.0 COG0457@1|root,COG0457@2|Bacteria,4NHH0@976|Bacteroidetes,2FP90@200643|Bacteroidia,22WWE@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat protein - - - - - - - - - - - - PD40,TPR_16 PHJFGMMN_03981 411477.PARMER_00735 4.62e-96 281.0 COG1030@1|root,COG1030@2|Bacteria,4NW09@976|Bacteroidetes,2FRYF@200643|Bacteroidia,22YD4@171551|Porphyromonadaceae 976|Bacteroidetes O NfeD-like C-terminal, partner-binding - - - - - - - - - - - - NfeD PHJFGMMN_03982 411477.PARMER_00734 1.52e-203 567.0 COG4864@1|root,COG4864@2|Bacteria,4NGG6@976|Bacteroidetes,2FPNC@200643|Bacteroidia,22WRB@171551|Porphyromonadaceae 976|Bacteroidetes S UPF0365 protein - - - - - - - - - - - - YdfA_immunity PHJFGMMN_03983 411477.PARMER_00733 3.32e-206 570.0 COG2820@1|root,COG2820@2|Bacteria,4NG5S@976|Bacteroidetes,2FM75@200643|Bacteroidia,22W39@171551|Porphyromonadaceae 976|Bacteroidetes F phosphorylase udp - 2.4.2.3 ko:K00757 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R01876,R02484,R08229 RC00063 ko00000,ko00001,ko01000 - - - PNP_UDP_1 PHJFGMMN_03984 411477.PARMER_00732 5.64e-173 483.0 COG0778@1|root,COG0778@2|Bacteria,4NJ80@976|Bacteroidetes,2FNX6@200643|Bacteroidia,22XFS@171551|Porphyromonadaceae 976|Bacteroidetes C Nitroreductase family - - 1.5.1.38,1.5.1.39 ko:K19285,ko:K19286 ko00740,ko01100,map00740,map01100 - R05705,R05706 RC00126 ko00000,ko00001,ko01000 - - - Nitroreductase PHJFGMMN_03985 411477.PARMER_00731 1.34e-301 820.0 COG1373@1|root,COG1373@2|Bacteria,4NE3E@976|Bacteroidetes,2FP33@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - ko:K07133 - - - - ko00000 - - - AAA_14 PHJFGMMN_03986 411477.PARMER_00730 1.06e-259 712.0 COG2768@1|root,COG2768@2|Bacteria,4NGYC@976|Bacteroidetes,2FPAI@200643|Bacteroidia,22X67@171551|Porphyromonadaceae 976|Bacteroidetes C Domain of unknown function (DUF362) - - - ko:K07138 - - - - ko00000 - - - DUF362,Fer4 PHJFGMMN_03987 411477.PARMER_00729 0.0 888.0 COG0486@1|root,COG0486@2|Bacteria,4NECT@976|Bacteroidetes,2FMER@200643|Bacteroidia,22WKU@171551|Porphyromonadaceae 976|Bacteroidetes S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 mnmE - - ko:K03650 - - R08701 RC00053,RC00209,RC00870 ko00000,ko01000,ko03016 - - - MMR_HSR1,MnmE_helical,TrmE_N PHJFGMMN_03988 449673.BACSTE_00243 1.4e-206 572.0 COG2452@1|root,COG2452@2|Bacteria,4NQVV@976|Bacteroidetes,2FQS5@200643|Bacteroidia,4AMAV@815|Bacteroidaceae 976|Bacteroidetes L DNA binding domain, excisionase family - - - - - - - - - - - - HTH_17 PHJFGMMN_03989 1077285.AGDG01000022_gene1207 7.84e-264 723.0 COG4974@1|root,COG4974@2|Bacteria,4NFDF@976|Bacteroidetes,2FQ0U@200643|Bacteroidia,4AKT5@815|Bacteroidaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase PHJFGMMN_03990 657309.BXY_36690 2.81e-67 205.0 COG3943@1|root,COG3943@2|Bacteria,4NWZ9@976|Bacteroidetes,2FSIE@200643|Bacteroidia,4ARP8@815|Bacteroidaceae 976|Bacteroidetes S COG3943, virulence protein - - - - - - - - - - - - - PHJFGMMN_03992 471870.BACINT_03930 1.34e-172 486.0 29Z0Q@1|root,30KXV@2|Bacteria,4NPX5@976|Bacteroidetes,2FM3W@200643|Bacteroidia,4AKXY@815|Bacteroidaceae 976|Bacteroidetes S Mobilizable transposon, TnpC family protein - - - - - - - - - - - - - PHJFGMMN_03995 657309.BXY_36650 3.22e-75 225.0 COG3311@1|root,COG3311@2|Bacteria,4NTBI@976|Bacteroidetes,2FSA8@200643|Bacteroidia,4AQID@815|Bacteroidaceae 976|Bacteroidetes K DNA binding domain, excisionase family - - - - - - - - - - - - HTH_17 PHJFGMMN_03996 1235803.C825_00815 0.0 880.0 COG0714@1|root,COG0714@2|Bacteria,4NJZG@976|Bacteroidetes,2FNHD@200643|Bacteroidia,22W8C@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3987) - - - - - - - - - - - - DUF3987 PHJFGMMN_03997 1077285.AGDG01000022_gene1202 5.43e-255 699.0 COG0358@1|root,COG0358@2|Bacteria,4NEFU@976|Bacteroidetes,2FNRA@200643|Bacteroidia,4AKPV@815|Bacteroidaceae 976|Bacteroidetes L COG NOG08810 non supervised orthologous group - - - - - - - - - - - - - PHJFGMMN_03998 1077285.AGDG01000022_gene1201 2.21e-66 201.0 2E51N@1|root,32ZV1@2|Bacteria,4NW1B@976|Bacteroidetes,2FSWH@200643|Bacteroidia,4ARJ4@815|Bacteroidaceae 976|Bacteroidetes S Bacterial mobilization protein MobC - - - - - - - - - - - - MobC PHJFGMMN_03999 742726.HMPREF9448_01267 8.24e-220 607.0 COG3843@1|root,COG3843@2|Bacteria,4NH77@976|Bacteroidetes,2FM27@200643|Bacteroidia,22VW4@171551|Porphyromonadaceae 976|Bacteroidetes U Relaxase/Mobilisation nuclease domain - - - - - - - - - - - - Relaxase PHJFGMMN_04000 742726.HMPREF9448_01266 6.28e-96 278.0 2B0EG@1|root,31SRW@2|Bacteria,4NRKT@976|Bacteroidetes,2FS5A@200643|Bacteroidia,22Y6Q@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_04001 1208321.D104_10415 1.1e-73 236.0 COG0732@1|root,COG0732@2|Bacteria,1MXSQ@1224|Proteobacteria,1S320@1236|Gammaproteobacteria,1XMAD@135619|Oceanospirillales 135619|Oceanospirillales L Restriction endonuclease, S - - 3.1.21.3 ko:K01154 - - - - ko00000,ko01000,ko02048 - - - Methylase_S PHJFGMMN_04002 449673.BACSTE_00229 2.69e-229 632.0 COG4974@1|root,COG4974@2|Bacteria,4NHEY@976|Bacteroidetes,2FM00@200643|Bacteroidia,4AP99@815|Bacteroidaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Phage_int_SAM_4,Phage_integrase PHJFGMMN_04003 657309.BXY_36570 5.29e-206 570.0 COG3645@1|root,COG3645@2|Bacteria,4NJ37@976|Bacteroidetes,2FNEB@200643|Bacteroidia,4APYV@815|Bacteroidaceae 976|Bacteroidetes S DNA-damage-inducible protein D dinD - - ko:K14623 - - - - ko00000,ko03400 - - - Bro-N PHJFGMMN_04004 641143.HMPREF9331_01293 1.71e-126 379.0 COG0732@1|root,COG0732@2|Bacteria,4NS05@976|Bacteroidetes,1IGGN@117743|Flavobacteriia,1ETBE@1016|Capnocytophaga 976|Bacteroidetes V K01154 type I restriction enzyme, S subunit - - 3.1.21.3 ko:K01154 - - - - ko00000,ko01000,ko02048 - - - Methylase_S PHJFGMMN_04005 449673.BACSTE_00226 2.23e-124 363.0 COG0732@1|root,COG0732@2|Bacteria,4PA2K@976|Bacteroidetes,2FQ0J@200643|Bacteroidia,4ATAS@815|Bacteroidaceae 976|Bacteroidetes V Type I restriction modification DNA specificity domain - - 3.1.21.3 ko:K01154 - - - - ko00000,ko01000,ko02048 - - - Methylase_S PHJFGMMN_04006 449673.BACSTE_00225 2.15e-237 653.0 COG3943@1|root,COG3943@2|Bacteria,4NEGN@976|Bacteroidetes,2FM81@200643|Bacteroidia,4AP0J@815|Bacteroidaceae 976|Bacteroidetes S COG3943 Virulence protein - - - - - - - - - - - - Virulence_RhuM PHJFGMMN_04007 449673.BACSTE_00224 0.0 1068.0 COG0286@1|root,COG0286@2|Bacteria,4NG0E@976|Bacteroidetes,2FNN6@200643|Bacteroidia,4ANZD@815|Bacteroidaceae 976|Bacteroidetes V COG0286 Type I restriction-modification system methyltransferase subunit hsdM - 2.1.1.72 ko:K03427 - - - - ko00000,ko01000,ko02048 - - - HsdM_N,N6_Mtase PHJFGMMN_04008 657309.BXY_36510 0.0 2112.0 COG0610@1|root,COG0610@2|Bacteria,4NFJ8@976|Bacteroidetes,2FMP6@200643|Bacteroidia,4AKDV@815|Bacteroidaceae 976|Bacteroidetes V Subunit R is required for both nuclease and ATPase activities, but not for modification hsdR - 3.1.21.3 ko:K01153 - - - - ko00000,ko01000,ko02048 - - - EcoR124_C,HSDR_N,ResIII PHJFGMMN_04009 449673.BACSTE_00222 2.16e-39 130.0 COG1813@1|root,COG1813@2|Bacteria,4PKWR@976|Bacteroidetes,2FTYN@200643|Bacteroidia,4ARTG@815|Bacteroidaceae 976|Bacteroidetes K Cro/C1-type HTH DNA-binding domain - - - - - - - - - - - - HTH_26,HTH_3 PHJFGMMN_04010 357276.EL88_15750 6.12e-153 432.0 COG0322@1|root,COG0322@2|Bacteria,4NHBM@976|Bacteroidetes,2FMBW@200643|Bacteroidia,4AT9K@815|Bacteroidaceae 976|Bacteroidetes L Domain of unknown function (DUF4357) - - - - - - - - - - - - DUF4357,GIY-YIG PHJFGMMN_04011 357276.EL88_15750 2.26e-32 119.0 COG0322@1|root,COG0322@2|Bacteria,4NHBM@976|Bacteroidetes,2FMBW@200643|Bacteroidia,4AT9K@815|Bacteroidaceae 976|Bacteroidetes L Domain of unknown function (DUF4357) - - - - - - - - - - - - DUF4357,GIY-YIG PHJFGMMN_04012 762968.HMPREF9441_03436 2.72e-113 325.0 2ECEJ@1|root,336CU@2|Bacteria,4PNG5@976|Bacteroidetes,2FS8R@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_04013 742817.HMPREF9449_00085 2.54e-60 185.0 2F8HM@1|root,340WF@2|Bacteria,4P4Q7@976|Bacteroidetes,2FTJM@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - PHJFGMMN_04017 411477.PARMER_03597 3.33e-287 785.0 COG3147@1|root,COG3147@2|Bacteria,4NR05@976|Bacteroidetes,2FMFP@200643|Bacteroidia,22YH6@171551|Porphyromonadaceae 976|Bacteroidetes S Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl_2 PHJFGMMN_04018 411477.PARMER_03596 3.16e-119 341.0 COG1595@1|root,COG1595@2|Bacteria,4NQCH@976|Bacteroidetes,2FSRW@200643|Bacteroidia,22Y21@171551|Porphyromonadaceae 976|Bacteroidetes K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 PHJFGMMN_04019 411477.PARMER_03595 0.0 1034.0 COG1649@1|root,COG1649@2|Bacteria,4NHEB@976|Bacteroidetes,2FMZJ@200643|Bacteroidia,22XHM@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl hydrolase-like 10 yngK - - - - - - - - - - - GHL10 PHJFGMMN_04020 411477.PARMER_03594 4.13e-181 504.0 COG0584@1|root,COG0584@2|Bacteria,4NMGN@976|Bacteroidetes,2FP5M@200643|Bacteroidia,22XX0@171551|Porphyromonadaceae 976|Bacteroidetes C Glycerophosphoryl diester phosphodiesterase family - - 3.1.4.46 ko:K01126 ko00564,map00564 - R01030,R01470 RC00017,RC00425 ko00000,ko00001,ko01000 - - - GDPD PHJFGMMN_04021 411477.PARMER_03593 1.97e-229 631.0 COG0492@1|root,COG0492@2|Bacteria,4NEVX@976|Bacteroidetes,2FMNF@200643|Bacteroidia,22WGV@171551|Porphyromonadaceae 976|Bacteroidetes C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family trxB - 1.8.1.9 ko:K00384 ko00450,map00450 - R02016,R03596,R09372 RC00013,RC02518,RC02873 ko00000,ko00001,ko01000 - - - Pyr_redox_2 PHJFGMMN_04022 411477.PARMER_03592 1.76e-155 436.0 COG2834@1|root,COG2834@2|Bacteria,4NFGN@976|Bacteroidetes,2FQ63@200643|Bacteroidia,22YN1@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane lipoprotein carrier protein LolA lolA - - ko:K03634 - - - - ko00000 - - - LolA,LolA_2 PHJFGMMN_04023 411477.PARMER_03591 0.0 1593.0 COG1674@1|root,COG1674@2|Bacteria,4NE86@976|Bacteroidetes,2FMX0@200643|Bacteroidia,22WU0@171551|Porphyromonadaceae 976|Bacteroidetes D cell division protein FtsK ftsK - - ko:K03466 - - - - ko00000,ko03036 3.A.12 - - FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma PHJFGMMN_04025 411477.PARMER_03590 8.34e-127 360.0 2AIA7@1|root,318R1@2|Bacteria,4NQPK@976|Bacteroidetes,2FPYF@200643|Bacteroidia,22Y48@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF5063) - - - - - - - - - - - - DUF5063 PHJFGMMN_04026 411477.PARMER_03589 8.55e-135 382.0 COG0349@1|root,COG0349@2|Bacteria,4NP3B@976|Bacteroidetes,2FN2U@200643|Bacteroidia,22XW2@171551|Porphyromonadaceae 976|Bacteroidetes L 3'-5' exonuclease rnd - - - - - - - - - - - DNA_pol_A_exo1 PHJFGMMN_04027 411477.PARMER_03588 4.1e-295 804.0 COG1092@1|root,COG1092@2|Bacteria,4NG9S@976|Bacteroidetes,2FN8H@200643|Bacteroidia,22WK0@171551|Porphyromonadaceae 976|Bacteroidetes J SAM-dependent methyltransferase rlmI - 2.1.1.191 ko:K06969 - - - - ko00000,ko01000,ko03009 - - - Methyltrans_SAM PHJFGMMN_04028 411477.PARMER_03587 4.57e-217 600.0 COG0039@1|root,COG0039@2|Bacteria,4NEJ7@976|Bacteroidetes,2FM7E@200643|Bacteroidia,22WCV@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the reversible oxidation of malate to oxaloacetate mdh - 1.1.1.37 ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740 R00342,R07136 RC00031 ko00000,ko00001,ko00002,ko01000 - - - Ldh_1_C,Ldh_1_N PHJFGMMN_04029 411477.PARMER_03585 3.25e-187 520.0 COG2133@1|root,COG2133@2|Bacteria,4PKJE@976|Bacteroidetes,2FX58@200643|Bacteroidia,231GZ@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 PHJFGMMN_04030 411477.PARMER_03583 1.54e-154 437.0 COG1043@1|root,COG1043@2|Bacteria,4NN2E@976|Bacteroidetes,2FMA1@200643|Bacteroidia,22VX4@171551|Porphyromonadaceae 976|Bacteroidetes M Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxA2 - 2.3.1.129 ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 M00060 R04567 RC00039,RC00055 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Acetyltransf_11,Hexapep PHJFGMMN_04031 411477.PARMER_03582 0.0 870.0 COG1538@1|root,COG1538@2|Bacteria,4NDZK@976|Bacteroidetes,2FND5@200643|Bacteroidia,22W3J@171551|Porphyromonadaceae 976|Bacteroidetes MU Efflux transporter, outer membrane factor - - - - - - - - - - - - OEP PHJFGMMN_04032 411477.PARMER_03581 0.0 2030.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FM3B@200643|Bacteroidia,22WZM@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family mexF - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran PHJFGMMN_04033 411477.PARMER_03580 1.31e-270 743.0 COG0845@1|root,COG0845@2|Bacteria,4NEXN@976|Bacteroidetes,2FQ1C@200643|Bacteroidia,22VVY@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family mtrC - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 PHJFGMMN_04034 1268240.ATFI01000024_gene176 2.79e-133 379.0 2E80D@1|root,332EP@2|Bacteria,4NYY4@976|Bacteroidetes,2FRRM@200643|Bacteroidia,4AQ8N@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_04035 1268240.ATFI01000024_gene175 7.8e-243 669.0 2BYQX@1|root,32R3T@2|Bacteria,4NQSR@976|Bacteroidetes,2FQIB@200643|Bacteroidia,4AVUZ@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - PHJFGMMN_04036 470145.BACCOP_02352 4.58e-142 405.0 2DM9D@1|root,328C5@2|Bacteria,4NPRC@976|Bacteroidetes,2FRTC@200643|Bacteroidia,4AMP2@815|Bacteroidaceae 976|Bacteroidetes S COG NOG37815 non supervised orthologous group - - - - - - - - - - - - DDE_Tnp_1 ## 3500 queries scanned ## Total time (seconds): 341.22524309158325 ## Rate: 10.26 q/s