GCA_024125465.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJPFDEDJL_11 (original name was: gnl|Prokka|JPFDEDJL_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	370,029	411,192

gnlProkkaJPFDEDJL_22 (original name was: gnl|Prokka|JPFDEDJL_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	RiPP-like	83,715	94,130	salivaricin CRL1328 α peptide/salivaricin CRL1328 β peptide	RiPP	66%

gnlProkkaJPFDEDJL_61 (original name was: gnl|Prokka|JPFDEDJL_61)

Region	Type	From	To	Most similar known cluster		Similarity
Region 37.1	RiPP-like	18,365	30,512

Region	Type	From	To	Most similar known cluster	Similarity
Region 11.1	T3PKS	370,029	411,192
Region 22.1	RiPP-like	83,715	94,130	salivaricin CRL1328 α peptide/salivaricin CRL1328 β peptide	RiPP	66%
Region 37.1	RiPP-like	18,365	30,512

Compact view

gnlProkkaJPFDEDJL_11 - Region 1 - T3PKS

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Location: 370,029 - 411,192 nt. (total: 41,164 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJPFDEDJL_22 - Region 1 - RiPP-like

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Location: 83,715 - 94,130 nt. (total: 10,416 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaJPFDEDJL_61 - Region 1 - RiPP-like

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Location: 18,365 - 30,512 nt. (total: 12,148 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.