GCA_024296065.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaCIMEBHAO_23 (original name was: gnl|Prokka|CIMEBHAO_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	T3PKS	244,121	285,287

gnlProkkaCIMEBHAO_31 (original name was: gnl|Prokka|CIMEBHAO_31)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	RiPP-like	12,817	23,017
Region 23.2	RiPP-like	87,484	106,329

gnlProkkaCIMEBHAO_32 (original name was: gnl|Prokka|CIMEBHAO_32)

Region	Type	From	To	Most similar known cluster		Similarity
Region 24.1	RiPP-like	14,368	26,464	quinolidomicin A	Polyketide	3%

Region	Type	From	To	Most similar known cluster	Similarity
Region 20.1	T3PKS	244,121	285,287
Region 23.1	RiPP-like	12,817	23,017
Region 23.2	RiPP-like	87,484	106,329
Region 24.1	RiPP-like	14,368	26,464	quinolidomicin A	Polyketide	3%

No secondary metabolite regions were found in these records:: gnlProkkaCIMEBHAO_1 (original name was: gnl|Prokka|CIMEBHAO_1); gnlProkkaCIMEBHAO_2 (original name was: gnl|Prokka|CIMEBHAO_2); gnlProkkaCIMEBHAO_3 (original name was: gnl|Prokka|CIMEBHAO_3); gnlProkkaCIMEBHAO_4 (original name was: gnl|Prokka|CIMEBHAO_4); gnlProkkaCIMEBHAO_5 (original name was: gnl|Prokka|CIMEBHAO_5); gnlProkkaCIMEBHAO_6 (original name was: gnl|Prokka|CIMEBHAO_6); gnlProkkaCIMEBHAO_7 (original name was: gnl|Prokka|CIMEBHAO_7); gnlProkkaCIMEBHAO_8 (original name was: gnl|Prokka|CIMEBHAO_8); gnlProkkaCIMEBHAO_9 (original name was: gnl|Prokka|CIMEBHAO_9); gnlProkkaCIMEBHAO_10 (original name was: gnl|Prokka|CIMEBHAO_10); gnlProkkaCIMEBHAO_11 (original name was: gnl|Prokka|CIMEBHAO_11); gnlProkkaCIMEBHAO_12 (original name was: gnl|Prokka|CIMEBHAO_12); gnlProkkaCIMEBHAO_13 (original name was: gnl|Prokka|CIMEBHAO_13); gnlProkkaCIMEBHAO_14 (original name was: gnl|Prokka|CIMEBHAO_14); gnlProkkaCIMEBHAO_15 (original name was: gnl|Prokka|CIMEBHAO_15); gnlProkkaCIMEBHAO_16 (original name was: gnl|Prokka|CIMEBHAO_16); gnlProkkaCIMEBHAO_17 (original name was: gnl|Prokka|CIMEBHAO_17); gnlProkkaCIMEBHAO_18 (original name was: gnl|Prokka|CIMEBHAO_18); gnlProkkaCIMEBHAO_19 (original name was: gnl|Prokka|CIMEBHAO_19); gnlProkkaCIMEBHAO_29 (original name was: gnl|Prokka|CIMEBHAO_29); gnlProkkaCIMEBHAO_30 (original name was: gnl|Prokka|CIMEBHAO_30); gnlProkkaCIMEBHAO_33 (original name was: gnl|Prokka|CIMEBHAO_33); gnlProkkaCIMEBHAO_34 (original name was: gnl|Prokka|CIMEBHAO_34)

Compact view

gnlProkkaCIMEBHAO_23 - Region 1 - T3PKS

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Location: 244,121 - 285,287 nt. (total: 41,167 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCIMEBHAO_31 - Region 1 - RiPP-like

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Location: 12,817 - 23,017 nt. (total: 10,201 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCIMEBHAO_31 - Region 2 - RiPP-like

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Location: 87,484 - 106,329 nt. (total: 18,846 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCIMEBHAO_32 - Region 1 - RiPP-like

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Location: 14,368 - 26,464 nt. (total: 12,097 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1