GCA_024452365.1 - 12 region(s)

Region	Type	From	To	Most similar known cluster	Similarity
Region 1	NRPS	302,531	367,938	surfactin	NRP:Lipopeptide	82%
Region 2	PKS-like	902,857	944,101	butirosin A/butirosin B	Saccharide	7%
Region 3	terpene	1,026,118	1,046,858
Region 4	lanthipeptide-class-ii	1,167,713	1,196,602
Region 5	transAT-PKS	1,366,905	1,455,104	macrolactin H	Polyketide	100%
Region 6	transAT-PKS,T3PKS,NRPS	1,716,997	1,827,120	bacillaene	Polyketide+NRP	100%
Region 7	NRPS,transAT-PKS,betalactone	1,882,344	2,020,178	fengycin	NRP	100%
Region 8	terpene	2,042,741	2,064,624
Region 9	T3PKS	2,133,292	2,174,392
Region 10	transAT-PKS	2,290,724	2,396,911	difficidin	Polyketide	100%
Region 11	NRP-metallophore,NRPS,RiPP-like	3,012,173	3,063,965	bacillibactin	NRP	100%
Region 12	other	3,574,962	3,616,380	bacilysin	Other	100%

gnlProkkaKDOPHFOI_1 - Region 1 - NRPS

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Location: 302,531 - 367,938 nt. (total: 65,408 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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gnlProkkaKDOPHFOI_1 - Region 2 - PKS-like

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Location: 902,857 - 944,101 nt. (total: 41,245 nt) Show pHMM detection rules used

PKS-like: (t2pks2 or ksIII)

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core biosynthetic genes

additional biosynthetic genes

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other genes

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gnlProkkaKDOPHFOI_1 - Region 3 - terpene

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Location: 1,026,118 - 1,046,858 nt. (total: 20,741 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaKDOPHFOI_1 - Region 4 - lanthipeptide-class-ii

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Location: 1,167,713 - 1,196,602 nt. (total: 28,890 nt) Show pHMM detection rules used

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

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core biosynthetic genes

additional biosynthetic genes

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resistance

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gnlProkkaKDOPHFOI_1 - Region 5 - transAT-PKS

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Location: 1,366,905 - 1,455,104 nt. (total: 88,200 nt) Show pHMM detection rules used

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core biosynthetic genes

additional biosynthetic genes

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resistance

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gnlProkkaKDOPHFOI_1 - Region 6 - NRPS,T3PKS,transAT-PKS

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Location: 1,716,997 - 1,827,120 nt. (total: 110,124 nt) Show pHMM detection rules used

transAT-PKS: (cds(PKS_AT and not (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) and (cds(ATd and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) or cds(tra_KS and PP-binding)))
T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)
NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaKDOPHFOI_1 - Region 7 - NRPS,betalactone,transAT-PKS

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Location: 1,882,344 - 2,020,178 nt. (total: 137,835 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))
transAT-PKS: (cds(PKS_AT and not (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) and (cds(ATd and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) or cds(tra_KS and PP-binding)))
betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaKDOPHFOI_1 - Region 8 - terpene

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Location: 2,042,741 - 2,064,624 nt. (total: 21,884 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaKDOPHFOI_1 - Region 9 - T3PKS

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Location: 2,133,292 - 2,174,392 nt. (total: 41,101 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaKDOPHFOI_1 - Region 10 - transAT-PKS

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Location: 2,290,724 - 2,396,911 nt. (total: 106,188 nt) Show pHMM detection rules used

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

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resistance

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gnlProkkaKDOPHFOI_1 - Region 11 - NRP-metallophore,NRPS,RiPP-like

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Location: 3,012,173 - 3,063,965 nt. (total: 51,793 nt) Show pHMM detection rules used

NRP-metallophore: (VibH_like or Cy_tandem or (cds(Condensation and AMP-binding) and ((IBH_Asp and not SBH_Asp) or IBH_His or TBH_Asp or CyanoBH_Asp1 or CyanoBH_Asp2 or IPL or SalSyn or (EntA and EntC) or (GrbD and GrbE) or (FbnL and FbnM) or PvdO or PvdP or (Orn_monoox and not (KtzT or MetRS-like)) or Lys_monoox or VbsL)))
NRPS: cds(Condensation and (AMP-binding or A-OX))
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaKDOPHFOI_1 - Region 12 - other

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Location: 3,574,962 - 3,616,380 nt. (total: 41,419 nt) Show pHMM detection rules used

other: (LmbU or Neocarzinostat or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin or orf2_PTase)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Identified secondary metabolite regions using strictness 'relaxed'

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Lanthipeptide(s) for ctg1_1141

MIBiG 3.1 matches for ctg1_1140

antiSMASH-DB 4.0 matches for ctg1_1140

MIBiG 3.1 matches for ctg1_1143

antiSMASH-DB 4.0 matches for ctg1_1143

MIBiG 3.1 matches for ctg1_1144

antiSMASH-DB 4.0 matches for ctg1_1144

Lanthipeptide(s) for ctg1_1145

MIBiG 3.1 matches for ctg1_1140

antiSMASH-DB 4.0 matches for ctg1_1140

MIBiG 3.1 matches for ctg1_1143

antiSMASH-DB 4.0 matches for ctg1_1143

MIBiG 3.1 matches for ctg1_1144

antiSMASH-DB 4.0 matches for ctg1_1144

MIBiG 3.1 matches for ctg1_1157

antiSMASH-DB 4.0 matches for ctg1_1157

MIBiG 3.1 matches for allorf_1183034_1183216

antiSMASH-DB 4.0 matches for allorf_1183034_1183216

antiSMASH-DB 4.0 matches for allorf_1193417_1193614

antiSMASH-DB 4.0 matches for allorf_1196265_1196366

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