GCA_025122595.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaLMFKICBK_11 (original name was: gnl|Prokka|LMFKICBK_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	cyclic-lactone-autoinducer	37,227	57,932

gnlProkkaLMFKICBK_124 (original name was: gnl|Prokka|LMFKICBK_124)

Region	Type	From	To	Most similar known cluster		Similarity
Region 55.1	terpene	23,441	44,322

gnlProkkaLMFKICBK_127 (original name was: gnl|Prokka|LMFKICBK_127)

Region	Type	From	To	Most similar known cluster		Similarity
Region 57.1	RiPP-like	33,097	45,247

gnlProkkaLMFKICBK_143 (original name was: gnl|Prokka|LMFKICBK_143)

Region	Type	From	To	Most similar known cluster		Similarity
Region 72.1	T3PKS	1	25,674

Region	Type	From	To	Similarity
Region 7.1	cyclic-lactone-autoinducer	37,227	57,932
Region 55.1	terpene	23,441	44,322
Region 57.1	RiPP-like	33,097	45,247
Region 72.1	T3PKS	1	25,674

No secondary metabolite regions were found in these records:: gnlProkkaLMFKICBK_2 (original name was: gnl|Prokka|LMFKICBK_2); gnlProkkaLMFKICBK_3 (original name was: gnl|Prokka|LMFKICBK_3); gnlProkkaLMFKICBK_4 (original name was: gnl|Prokka|LMFKICBK_4); gnlProkkaLMFKICBK_6 (original name was: gnl|Prokka|LMFKICBK_6); gnlProkkaLMFKICBK_9 (original name was: gnl|Prokka|LMFKICBK_9); gnlProkkaLMFKICBK_10 (original name was: gnl|Prokka|LMFKICBK_10); gnlProkkaLMFKICBK_12 (original name was: gnl|Prokka|LMFKICBK_12); gnlProkkaLMFKICBK_13 (original name was: gnl|Prokka|LMFKICBK_13); gnlProkkaLMFKICBK_14 (original name was: gnl|Prokka|LMFKICBK_14); gnlProkkaLMFKICBK_15 (original name was: gnl|Prokka|LMFKICBK_15); gnlProkkaLMFKICBK_16 (original name was: gnl|Prokka|LMFKICBK_16); gnlProkkaLMFKICBK_18 (original name was: gnl|Prokka|LMFKICBK_18); gnlProkkaLMFKICBK_22 (original name was: gnl|Prokka|LMFKICBK_22); gnlProkkaLMFKICBK_28 (original name was: gnl|Prokka|LMFKICBK_28); gnlProkkaLMFKICBK_34 (original name was: gnl|Prokka|LMFKICBK_34); gnlProkkaLMFKICBK_39 (original name was: gnl|Prokka|LMFKICBK_39); gnlProkkaLMFKICBK_41 (original name was: gnl|Prokka|LMFKICBK_41); gnlProkkaLMFKICBK_42 (original name was: gnl|Prokka|LMFKICBK_42); gnlProkkaLMFKICBK_45 (original name was: gnl|Prokka|LMFKICBK_45); gnlProkkaLMFKICBK_48 (original name was: gnl|Prokka|LMFKICBK_48); gnlProkkaLMFKICBK_49 (original name was: gnl|Prokka|LMFKICBK_49); gnlProkkaLMFKICBK_50 (original name was: gnl|Prokka|LMFKICBK_50); gnlProkkaLMFKICBK_54 (original name was: gnl|Prokka|LMFKICBK_54); gnlProkkaLMFKICBK_55 (original name was: gnl|Prokka|LMFKICBK_55); gnlProkkaLMFKICBK_59 (original name was: gnl|Prokka|LMFKICBK_59); gnlProkkaLMFKICBK_61 (original name was: gnl|Prokka|LMFKICBK_61); gnlProkkaLMFKICBK_62 (original name was: gnl|Prokka|LMFKICBK_62); gnlProkkaLMFKICBK_69 (original name was: gnl|Prokka|LMFKICBK_69); gnlProkkaLMFKICBK_71 (original name was: gnl|Prokka|LMFKICBK_71); gnlProkkaLMFKICBK_75 (original name was: gnl|Prokka|LMFKICBK_75); gnlProkkaLMFKICBK_78 (original name was: gnl|Prokka|LMFKICBK_78); gnlProkkaLMFKICBK_85 (original name was: gnl|Prokka|LMFKICBK_85); gnlProkkaLMFKICBK_90 (original name was: gnl|Prokka|LMFKICBK_90); gnlProkkaLMFKICBK_92 (original name was: gnl|Prokka|LMFKICBK_92); gnlProkkaLMFKICBK_93 (original name was: gnl|Prokka|LMFKICBK_93); gnlProkkaLMFKICBK_96 (original name was: gnl|Prokka|LMFKICBK_96); gnlProkkaLMFKICBK_98 (original name was: gnl|Prokka|LMFKICBK_98); gnlProkkaLMFKICBK_99 (original name was: gnl|Prokka|LMFKICBK_99); gnlProkkaLMFKICBK_102 (original name was: gnl|Prokka|LMFKICBK_102); gnlProkkaLMFKICBK_104 (original name was: gnl|Prokka|LMFKICBK_104); gnlProkkaLMFKICBK_105 (original name was: gnl|Prokka|LMFKICBK_105); gnlProkkaLMFKICBK_106 (original name was: gnl|Prokka|LMFKICBK_106); gnlProkkaLMFKICBK_110 (original name was: gnl|Prokka|LMFKICBK_110); gnlProkkaLMFKICBK_112 (original name was: gnl|Prokka|LMFKICBK_112); gnlProkkaLMFKICBK_113 (original name was: gnl|Prokka|LMFKICBK_113); gnlProkkaLMFKICBK_115 (original name was: gnl|Prokka|LMFKICBK_115); gnlProkkaLMFKICBK_116 (original name was: gnl|Prokka|LMFKICBK_116); gnlProkkaLMFKICBK_117 (original name was: gnl|Prokka|LMFKICBK_117); gnlProkkaLMFKICBK_119 (original name was: gnl|Prokka|LMFKICBK_119); gnlProkkaLMFKICBK_120 (original name was: gnl|Prokka|LMFKICBK_120); gnlProkkaLMFKICBK_121 (original name was: gnl|Prokka|LMFKICBK_121); gnlProkkaLMFKICBK_122 (original name was: gnl|Prokka|LMFKICBK_122); gnlProkkaLMFKICBK_123 (original name was: gnl|Prokka|LMFKICBK_123); gnlProkkaLMFKICBK_125 (original name was: gnl|Prokka|LMFKICBK_125); gnlProkkaLMFKICBK_128 (original name was: gnl|Prokka|LMFKICBK_128); gnlProkkaLMFKICBK_129 (original name was: gnl|Prokka|LMFKICBK_129); gnlProkkaLMFKICBK_130 (original name was: gnl|Prokka|LMFKICBK_130); gnlProkkaLMFKICBK_131 (original name was: gnl|Prokka|LMFKICBK_131); gnlProkkaLMFKICBK_132 (original name was: gnl|Prokka|LMFKICBK_132); gnlProkkaLMFKICBK_133 (original name was: gnl|Prokka|LMFKICBK_133); gnlProkkaLMFKICBK_134 (original name was: gnl|Prokka|LMFKICBK_134); gnlProkkaLMFKICBK_135 (original name was: gnl|Prokka|LMFKICBK_135); gnlProkkaLMFKICBK_136 (original name was: gnl|Prokka|LMFKICBK_136); gnlProkkaLMFKICBK_137 (original name was: gnl|Prokka|LMFKICBK_137); gnlProkkaLMFKICBK_138 (original name was: gnl|Prokka|LMFKICBK_138); gnlProkkaLMFKICBK_139 (original name was: gnl|Prokka|LMFKICBK_139); gnlProkkaLMFKICBK_140 (original name was: gnl|Prokka|LMFKICBK_140); gnlProkkaLMFKICBK_141 (original name was: gnl|Prokka|LMFKICBK_141); gnlProkkaLMFKICBK_144 (original name was: gnl|Prokka|LMFKICBK_144); gnlProkkaLMFKICBK_145 (original name was: gnl|Prokka|LMFKICBK_145); gnlProkkaLMFKICBK_147 (original name was: gnl|Prokka|LMFKICBK_147); gnlProkkaLMFKICBK_148 (original name was: gnl|Prokka|LMFKICBK_148); gnlProkkaLMFKICBK_149 (original name was: gnl|Prokka|LMFKICBK_149); gnlProkkaLMFKICBK_150 (original name was: gnl|Prokka|LMFKICBK_150); gnlProkkaLMFKICBK_151 (original name was: gnl|Prokka|LMFKICBK_151); gnlProkkaLMFKICBK_152 (original name was: gnl|Prokka|LMFKICBK_152); gnlProkkaLMFKICBK_153 (original name was: gnl|Prokka|LMFKICBK_153); gnlProkkaLMFKICBK_154 (original name was: gnl|Prokka|LMFKICBK_154); gnlProkkaLMFKICBK_155 (original name was: gnl|Prokka|LMFKICBK_155); gnlProkkaLMFKICBK_156 (original name was: gnl|Prokka|LMFKICBK_156); gnlProkkaLMFKICBK_158 (original name was: gnl|Prokka|LMFKICBK_158); gnlProkkaLMFKICBK_159 (original name was: gnl|Prokka|LMFKICBK_159); gnlProkkaLMFKICBK_160 (original name was: gnl|Prokka|LMFKICBK_160); gnlProkkaLMFKICBK_161 (original name was: gnl|Prokka|LMFKICBK_161); gnlProkkaLMFKICBK_162 (original name was: gnl|Prokka|LMFKICBK_162); gnlProkkaLMFKICBK_164 (original name was: gnl|Prokka|LMFKICBK_164); gnlProkkaLMFKICBK_166 (original name was: gnl|Prokka|LMFKICBK_166); gnlProkkaLMFKICBK_167 (original name was: gnl|Prokka|LMFKICBK_167); gnlProkkaLMFKICBK_168 (original name was: gnl|Prokka|LMFKICBK_168); gnlProkkaLMFKICBK_170 (original name was: gnl|Prokka|LMFKICBK_170); gnlProkkaLMFKICBK_171 (original name was: gnl|Prokka|LMFKICBK_171); gnlProkkaLMFKICBK_174 (original name was: gnl|Prokka|LMFKICBK_174); gnlProkkaLMFKICBK_175 (original name was: gnl|Prokka|LMFKICBK_175); gnlProkkaLMFKICBK_176 (original name was: gnl|Prokka|LMFKICBK_176)

Compact view

gnlProkkaLMFKICBK_11 - Region 1 - cyclic-lactone-autoinducer

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Location: 37,227 - 57,932 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLMFKICBK_124 - Region 1 - terpene

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Location: 23,441 - 44,322 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLMFKICBK_127 - Region 1 - RiPP-like

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Location: 33,097 - 45,247 nt. (total: 12,151 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLMFKICBK_143 - Region 1 - T3PKS

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Location: 1 - 25,674 nt. (total: 25,674 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.