GCA_025189815.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaPEBMBLIH_4 (original name was: gnl|Prokka|PEBMBLIH_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	cyclic-lactone-autoinducer	9,713	30,418

gnlProkkaPEBMBLIH_19 (original name was: gnl|Prokka|PEBMBLIH_19)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RiPP-like	67,517	79,667

gnlProkkaPEBMBLIH_37 (original name was: gnl|Prokka|PEBMBLIH_37)

Region	Type	From	To	Most similar known cluster		Similarity
Region 27.1	T3PKS	290,919	332,088

gnlProkkaPEBMBLIH_48 (original name was: gnl|Prokka|PEBMBLIH_48)

Region	Type	From	To	Most similar known cluster		Similarity
Region 29.1	terpene	1	12,287

Region	Type	From	To	Similarity
Region 3.1	cyclic-lactone-autoinducer	9,713	30,418
Region 12.1	RiPP-like	67,517	79,667
Region 27.1	T3PKS	290,919	332,088
Region 29.1	terpene	1	12,287

No secondary metabolite regions were found in these records:: gnlProkkaPEBMBLIH_1 (original name was: gnl|Prokka|PEBMBLIH_1); gnlProkkaPEBMBLIH_3 (original name was: gnl|Prokka|PEBMBLIH_3); gnlProkkaPEBMBLIH_7 (original name was: gnl|Prokka|PEBMBLIH_7); gnlProkkaPEBMBLIH_8 (original name was: gnl|Prokka|PEBMBLIH_8); gnlProkkaPEBMBLIH_12 (original name was: gnl|Prokka|PEBMBLIH_12); gnlProkkaPEBMBLIH_13 (original name was: gnl|Prokka|PEBMBLIH_13); gnlProkkaPEBMBLIH_15 (original name was: gnl|Prokka|PEBMBLIH_15); gnlProkkaPEBMBLIH_16 (original name was: gnl|Prokka|PEBMBLIH_16); gnlProkkaPEBMBLIH_17 (original name was: gnl|Prokka|PEBMBLIH_17); gnlProkkaPEBMBLIH_18 (original name was: gnl|Prokka|PEBMBLIH_18); gnlProkkaPEBMBLIH_20 (original name was: gnl|Prokka|PEBMBLIH_20); gnlProkkaPEBMBLIH_21 (original name was: gnl|Prokka|PEBMBLIH_21); gnlProkkaPEBMBLIH_22 (original name was: gnl|Prokka|PEBMBLIH_22); gnlProkkaPEBMBLIH_23 (original name was: gnl|Prokka|PEBMBLIH_23); gnlProkkaPEBMBLIH_24 (original name was: gnl|Prokka|PEBMBLIH_24); gnlProkkaPEBMBLIH_26 (original name was: gnl|Prokka|PEBMBLIH_26); gnlProkkaPEBMBLIH_28 (original name was: gnl|Prokka|PEBMBLIH_28); gnlProkkaPEBMBLIH_29 (original name was: gnl|Prokka|PEBMBLIH_29); gnlProkkaPEBMBLIH_30 (original name was: gnl|Prokka|PEBMBLIH_30); gnlProkkaPEBMBLIH_31 (original name was: gnl|Prokka|PEBMBLIH_31); gnlProkkaPEBMBLIH_32 (original name was: gnl|Prokka|PEBMBLIH_32); gnlProkkaPEBMBLIH_33 (original name was: gnl|Prokka|PEBMBLIH_33); gnlProkkaPEBMBLIH_34 (original name was: gnl|Prokka|PEBMBLIH_34); gnlProkkaPEBMBLIH_35 (original name was: gnl|Prokka|PEBMBLIH_35); gnlProkkaPEBMBLIH_47 (original name was: gnl|Prokka|PEBMBLIH_47); gnlProkkaPEBMBLIH_49 (original name was: gnl|Prokka|PEBMBLIH_49); gnlProkkaPEBMBLIH_50 (original name was: gnl|Prokka|PEBMBLIH_50); gnlProkkaPEBMBLIH_51 (original name was: gnl|Prokka|PEBMBLIH_51); gnlProkkaPEBMBLIH_52 (original name was: gnl|Prokka|PEBMBLIH_52); gnlProkkaPEBMBLIH_53 (original name was: gnl|Prokka|PEBMBLIH_53); gnlProkkaPEBMBLIH_54 (original name was: gnl|Prokka|PEBMBLIH_54); gnlProkkaPEBMBLIH_55 (original name was: gnl|Prokka|PEBMBLIH_55); gnlProkkaPEBMBLIH_56 (original name was: gnl|Prokka|PEBMBLIH_56); gnlProkkaPEBMBLIH_57 (original name was: gnl|Prokka|PEBMBLIH_57); gnlProkkaPEBMBLIH_58 (original name was: gnl|Prokka|PEBMBLIH_58); gnlProkkaPEBMBLIH_59 (original name was: gnl|Prokka|PEBMBLIH_59); gnlProkkaPEBMBLIH_60 (original name was: gnl|Prokka|PEBMBLIH_60); gnlProkkaPEBMBLIH_61 (original name was: gnl|Prokka|PEBMBLIH_61); gnlProkkaPEBMBLIH_62 (original name was: gnl|Prokka|PEBMBLIH_62); gnlProkkaPEBMBLIH_63 (original name was: gnl|Prokka|PEBMBLIH_63); gnlProkkaPEBMBLIH_64 (original name was: gnl|Prokka|PEBMBLIH_64); gnlProkkaPEBMBLIH_65 (original name was: gnl|Prokka|PEBMBLIH_65); gnlProkkaPEBMBLIH_66 (original name was: gnl|Prokka|PEBMBLIH_66); gnlProkkaPEBMBLIH_67 (original name was: gnl|Prokka|PEBMBLIH_67); gnlProkkaPEBMBLIH_69 (original name was: gnl|Prokka|PEBMBLIH_69); gnlProkkaPEBMBLIH_70 (original name was: gnl|Prokka|PEBMBLIH_70); gnlProkkaPEBMBLIH_71 (original name was: gnl|Prokka|PEBMBLIH_71); gnlProkkaPEBMBLIH_72 (original name was: gnl|Prokka|PEBMBLIH_72); gnlProkkaPEBMBLIH_73 (original name was: gnl|Prokka|PEBMBLIH_73); gnlProkkaPEBMBLIH_74 (original name was: gnl|Prokka|PEBMBLIH_74); gnlProkkaPEBMBLIH_75 (original name was: gnl|Prokka|PEBMBLIH_75); gnlProkkaPEBMBLIH_76 (original name was: gnl|Prokka|PEBMBLIH_76); gnlProkkaPEBMBLIH_78 (original name was: gnl|Prokka|PEBMBLIH_78)

Compact view

gnlProkkaPEBMBLIH_4 - Region 1 - cyclic-lactone-autoinducer

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Location: 9,713 - 30,418 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPEBMBLIH_19 - Region 1 - RiPP-like

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Location: 67,517 - 79,667 nt. (total: 12,151 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPEBMBLIH_37 - Region 1 - T3PKS

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Location: 290,919 - 332,088 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPEBMBLIH_48 - Region 1 - terpene

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Location: 1 - 12,287 nt. (total: 12,287 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.