GCA_025189905.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaLEPMCGDO_16 (original name was: gnl|Prokka|LEPMCGDO_16)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	T3PKS	416,696	457,865

gnlProkkaLEPMCGDO_27 (original name was: gnl|Prokka|LEPMCGDO_27)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	terpene	175,607	196,488

gnlProkkaLEPMCGDO_37 (original name was: gnl|Prokka|LEPMCGDO_37)

Region	Type	From	To	Most similar known cluster		Similarity
Region 29.1	cyclic-lactone-autoinducer	285,452	306,157

gnlProkkaLEPMCGDO_55 (original name was: gnl|Prokka|LEPMCGDO_55)

Region	Type	From	To	Most similar known cluster		Similarity
Region 41.1	RiPP-like	65,491	77,641

Region	Type	From	To	Similarity
Region 10.1	T3PKS	416,696	457,865
Region 21.1	terpene	175,607	196,488
Region 29.1	cyclic-lactone-autoinducer	285,452	306,157
Region 41.1	RiPP-like	65,491	77,641

No secondary metabolite regions were found in these records:: gnlProkkaLEPMCGDO_3 (original name was: gnl|Prokka|LEPMCGDO_3); gnlProkkaLEPMCGDO_7 (original name was: gnl|Prokka|LEPMCGDO_7); gnlProkkaLEPMCGDO_9 (original name was: gnl|Prokka|LEPMCGDO_9); gnlProkkaLEPMCGDO_10 (original name was: gnl|Prokka|LEPMCGDO_10); gnlProkkaLEPMCGDO_11 (original name was: gnl|Prokka|LEPMCGDO_11); gnlProkkaLEPMCGDO_12 (original name was: gnl|Prokka|LEPMCGDO_12); gnlProkkaLEPMCGDO_13 (original name was: gnl|Prokka|LEPMCGDO_13); gnlProkkaLEPMCGDO_14 (original name was: gnl|Prokka|LEPMCGDO_14); gnlProkkaLEPMCGDO_15 (original name was: gnl|Prokka|LEPMCGDO_15); gnlProkkaLEPMCGDO_17 (original name was: gnl|Prokka|LEPMCGDO_17); gnlProkkaLEPMCGDO_18 (original name was: gnl|Prokka|LEPMCGDO_18); gnlProkkaLEPMCGDO_19 (original name was: gnl|Prokka|LEPMCGDO_19); gnlProkkaLEPMCGDO_20 (original name was: gnl|Prokka|LEPMCGDO_20); gnlProkkaLEPMCGDO_21 (original name was: gnl|Prokka|LEPMCGDO_21); gnlProkkaLEPMCGDO_22 (original name was: gnl|Prokka|LEPMCGDO_22); gnlProkkaLEPMCGDO_23 (original name was: gnl|Prokka|LEPMCGDO_23); gnlProkkaLEPMCGDO_24 (original name was: gnl|Prokka|LEPMCGDO_24); gnlProkkaLEPMCGDO_25 (original name was: gnl|Prokka|LEPMCGDO_25); gnlProkkaLEPMCGDO_26 (original name was: gnl|Prokka|LEPMCGDO_26); gnlProkkaLEPMCGDO_28 (original name was: gnl|Prokka|LEPMCGDO_28); gnlProkkaLEPMCGDO_29 (original name was: gnl|Prokka|LEPMCGDO_29); gnlProkkaLEPMCGDO_31 (original name was: gnl|Prokka|LEPMCGDO_31); gnlProkkaLEPMCGDO_32 (original name was: gnl|Prokka|LEPMCGDO_32); gnlProkkaLEPMCGDO_33 (original name was: gnl|Prokka|LEPMCGDO_33); gnlProkkaLEPMCGDO_34 (original name was: gnl|Prokka|LEPMCGDO_34); gnlProkkaLEPMCGDO_36 (original name was: gnl|Prokka|LEPMCGDO_36); gnlProkkaLEPMCGDO_39 (original name was: gnl|Prokka|LEPMCGDO_39); gnlProkkaLEPMCGDO_40 (original name was: gnl|Prokka|LEPMCGDO_40); gnlProkkaLEPMCGDO_41 (original name was: gnl|Prokka|LEPMCGDO_41); gnlProkkaLEPMCGDO_42 (original name was: gnl|Prokka|LEPMCGDO_42); gnlProkkaLEPMCGDO_44 (original name was: gnl|Prokka|LEPMCGDO_44); gnlProkkaLEPMCGDO_45 (original name was: gnl|Prokka|LEPMCGDO_45); gnlProkkaLEPMCGDO_47 (original name was: gnl|Prokka|LEPMCGDO_47); gnlProkkaLEPMCGDO_49 (original name was: gnl|Prokka|LEPMCGDO_49); gnlProkkaLEPMCGDO_51 (original name was: gnl|Prokka|LEPMCGDO_51); gnlProkkaLEPMCGDO_52 (original name was: gnl|Prokka|LEPMCGDO_52); gnlProkkaLEPMCGDO_54 (original name was: gnl|Prokka|LEPMCGDO_54); gnlProkkaLEPMCGDO_57 (original name was: gnl|Prokka|LEPMCGDO_57); gnlProkkaLEPMCGDO_58 (original name was: gnl|Prokka|LEPMCGDO_58); gnlProkkaLEPMCGDO_59 (original name was: gnl|Prokka|LEPMCGDO_59); gnlProkkaLEPMCGDO_60 (original name was: gnl|Prokka|LEPMCGDO_60); gnlProkkaLEPMCGDO_63 (original name was: gnl|Prokka|LEPMCGDO_63); gnlProkkaLEPMCGDO_66 (original name was: gnl|Prokka|LEPMCGDO_66); gnlProkkaLEPMCGDO_67 (original name was: gnl|Prokka|LEPMCGDO_67); gnlProkkaLEPMCGDO_70 (original name was: gnl|Prokka|LEPMCGDO_70); gnlProkkaLEPMCGDO_71 (original name was: gnl|Prokka|LEPMCGDO_71); gnlProkkaLEPMCGDO_72 (original name was: gnl|Prokka|LEPMCGDO_72)

Compact view

gnlProkkaLEPMCGDO_16 - Region 1 - T3PKS

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Location: 416,696 - 457,865 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

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resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLEPMCGDO_27 - Region 1 - terpene

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Location: 175,607 - 196,488 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLEPMCGDO_37 - Region 1 - cyclic-lactone-autoinducer

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Location: 285,452 - 306,157 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLEPMCGDO_55 - Region 1 - RiPP-like

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Location: 65,491 - 77,641 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.