GCA_025189925.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaBJPHDPLL_29 (original name was: gnl|Prokka|BJPHDPLL_29)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	T3PKS	303,001	328,674

gnlProkkaBJPHDPLL_52 (original name was: gnl|Prokka|BJPHDPLL_52)

Region	Type	From	To	Most similar known cluster		Similarity
Region 39.1	terpene	31,758	52,639

gnlProkkaBJPHDPLL_64 (original name was: gnl|Prokka|BJPHDPLL_64)

Region	Type	From	To	Most similar known cluster		Similarity
Region 50.1	RiPP-like	1	1,956	salivaricin CRL1328 α peptide/salivaricin CRL1328 β peptide	RiPP	16%

gnlProkkaBJPHDPLL_80 (original name was: gnl|Prokka|BJPHDPLL_80)

Region	Type	From	To	Most similar known cluster		Similarity
Region 61.1	cyclic-lactone-autoinducer	1	16,543

Region	Type	From	To	Most similar known cluster	Similarity
Region 19.1	T3PKS	303,001	328,674
Region 39.1	terpene	31,758	52,639
Region 50.1	RiPP-like	1	1,956	salivaricin CRL1328 α peptide/salivaricin CRL1328 β peptide	RiPP	16%
Region 61.1	cyclic-lactone-autoinducer	1	16,543

No secondary metabolite regions were found in these records:: gnlProkkaBJPHDPLL_3 (original name was: gnl|Prokka|BJPHDPLL_3); gnlProkkaBJPHDPLL_5 (original name was: gnl|Prokka|BJPHDPLL_5); gnlProkkaBJPHDPLL_7 (original name was: gnl|Prokka|BJPHDPLL_7); gnlProkkaBJPHDPLL_9 (original name was: gnl|Prokka|BJPHDPLL_9); gnlProkkaBJPHDPLL_11 (original name was: gnl|Prokka|BJPHDPLL_11); gnlProkkaBJPHDPLL_12 (original name was: gnl|Prokka|BJPHDPLL_12); gnlProkkaBJPHDPLL_17 (original name was: gnl|Prokka|BJPHDPLL_17); gnlProkkaBJPHDPLL_18 (original name was: gnl|Prokka|BJPHDPLL_18); gnlProkkaBJPHDPLL_19 (original name was: gnl|Prokka|BJPHDPLL_19); gnlProkkaBJPHDPLL_20 (original name was: gnl|Prokka|BJPHDPLL_20); gnlProkkaBJPHDPLL_21 (original name was: gnl|Prokka|BJPHDPLL_21); gnlProkkaBJPHDPLL_22 (original name was: gnl|Prokka|BJPHDPLL_22); gnlProkkaBJPHDPLL_23 (original name was: gnl|Prokka|BJPHDPLL_23); gnlProkkaBJPHDPLL_24 (original name was: gnl|Prokka|BJPHDPLL_24); gnlProkkaBJPHDPLL_25 (original name was: gnl|Prokka|BJPHDPLL_25); gnlProkkaBJPHDPLL_26 (original name was: gnl|Prokka|BJPHDPLL_26); gnlProkkaBJPHDPLL_27 (original name was: gnl|Prokka|BJPHDPLL_27); gnlProkkaBJPHDPLL_28 (original name was: gnl|Prokka|BJPHDPLL_28); gnlProkkaBJPHDPLL_30 (original name was: gnl|Prokka|BJPHDPLL_30); gnlProkkaBJPHDPLL_31 (original name was: gnl|Prokka|BJPHDPLL_31); gnlProkkaBJPHDPLL_32 (original name was: gnl|Prokka|BJPHDPLL_32); gnlProkkaBJPHDPLL_33 (original name was: gnl|Prokka|BJPHDPLL_33); gnlProkkaBJPHDPLL_34 (original name was: gnl|Prokka|BJPHDPLL_34); gnlProkkaBJPHDPLL_35 (original name was: gnl|Prokka|BJPHDPLL_35); gnlProkkaBJPHDPLL_36 (original name was: gnl|Prokka|BJPHDPLL_36); gnlProkkaBJPHDPLL_37 (original name was: gnl|Prokka|BJPHDPLL_37); gnlProkkaBJPHDPLL_38 (original name was: gnl|Prokka|BJPHDPLL_38); gnlProkkaBJPHDPLL_40 (original name was: gnl|Prokka|BJPHDPLL_40); gnlProkkaBJPHDPLL_42 (original name was: gnl|Prokka|BJPHDPLL_42); gnlProkkaBJPHDPLL_43 (original name was: gnl|Prokka|BJPHDPLL_43); gnlProkkaBJPHDPLL_44 (original name was: gnl|Prokka|BJPHDPLL_44); gnlProkkaBJPHDPLL_45 (original name was: gnl|Prokka|BJPHDPLL_45); gnlProkkaBJPHDPLL_46 (original name was: gnl|Prokka|BJPHDPLL_46); gnlProkkaBJPHDPLL_47 (original name was: gnl|Prokka|BJPHDPLL_47); gnlProkkaBJPHDPLL_48 (original name was: gnl|Prokka|BJPHDPLL_48); gnlProkkaBJPHDPLL_50 (original name was: gnl|Prokka|BJPHDPLL_50); gnlProkkaBJPHDPLL_51 (original name was: gnl|Prokka|BJPHDPLL_51); gnlProkkaBJPHDPLL_53 (original name was: gnl|Prokka|BJPHDPLL_53); gnlProkkaBJPHDPLL_54 (original name was: gnl|Prokka|BJPHDPLL_54); gnlProkkaBJPHDPLL_55 (original name was: gnl|Prokka|BJPHDPLL_55); gnlProkkaBJPHDPLL_56 (original name was: gnl|Prokka|BJPHDPLL_56); gnlProkkaBJPHDPLL_58 (original name was: gnl|Prokka|BJPHDPLL_58); gnlProkkaBJPHDPLL_59 (original name was: gnl|Prokka|BJPHDPLL_59); gnlProkkaBJPHDPLL_60 (original name was: gnl|Prokka|BJPHDPLL_60); gnlProkkaBJPHDPLL_61 (original name was: gnl|Prokka|BJPHDPLL_61); gnlProkkaBJPHDPLL_62 (original name was: gnl|Prokka|BJPHDPLL_62); gnlProkkaBJPHDPLL_63 (original name was: gnl|Prokka|BJPHDPLL_63); gnlProkkaBJPHDPLL_65 (original name was: gnl|Prokka|BJPHDPLL_65); gnlProkkaBJPHDPLL_66 (original name was: gnl|Prokka|BJPHDPLL_66); gnlProkkaBJPHDPLL_67 (original name was: gnl|Prokka|BJPHDPLL_67); gnlProkkaBJPHDPLL_68 (original name was: gnl|Prokka|BJPHDPLL_68); gnlProkkaBJPHDPLL_70 (original name was: gnl|Prokka|BJPHDPLL_70); gnlProkkaBJPHDPLL_71 (original name was: gnl|Prokka|BJPHDPLL_71); gnlProkkaBJPHDPLL_72 (original name was: gnl|Prokka|BJPHDPLL_72); gnlProkkaBJPHDPLL_75 (original name was: gnl|Prokka|BJPHDPLL_75); gnlProkkaBJPHDPLL_76 (original name was: gnl|Prokka|BJPHDPLL_76); gnlProkkaBJPHDPLL_77 (original name was: gnl|Prokka|BJPHDPLL_77); gnlProkkaBJPHDPLL_85 (original name was: gnl|Prokka|BJPHDPLL_85)

Compact view

gnlProkkaBJPHDPLL_29 - Region 1 - T3PKS

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Location: 303,001 - 328,674 nt. (total: 25,674 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBJPHDPLL_52 - Region 1 - terpene

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Location: 31,758 - 52,639 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBJPHDPLL_64 - Region 1 - RiPP-like

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Location: 1 - 1,956 nt. (total: 1,956 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaBJPHDPLL_80 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 16,543 nt. (total: 16,543 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.