GCA_025189945.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaPAJPOHPK_1 (original name was: gnl|Prokka|PAJPOHPK_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RiPP-like	67,550	79,700

gnlProkkaPAJPOHPK_5 (original name was: gnl|Prokka|PAJPOHPK_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	terpene	26,193	47,074

gnlProkkaPAJPOHPK_27 (original name was: gnl|Prokka|PAJPOHPK_27)

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	T3PKS	346,161	371,834

gnlProkkaPAJPOHPK_50 (original name was: gnl|Prokka|PAJPOHPK_50)

Region	Type	From	To	Most similar known cluster		Similarity
Region 37.1	cyclic-lactone-autoinducer	7,118	27,823

Region	Type	From	To	Similarity
Region 1.1	RiPP-like	67,550	79,700
Region 5.1	terpene	26,193	47,074
Region 25.1	T3PKS	346,161	371,834
Region 37.1	cyclic-lactone-autoinducer	7,118	27,823

No secondary metabolite regions were found in these records:: gnlProkkaPAJPOHPK_2 (original name was: gnl|Prokka|PAJPOHPK_2); gnlProkkaPAJPOHPK_3 (original name was: gnl|Prokka|PAJPOHPK_3); gnlProkkaPAJPOHPK_4 (original name was: gnl|Prokka|PAJPOHPK_4); gnlProkkaPAJPOHPK_6 (original name was: gnl|Prokka|PAJPOHPK_6); gnlProkkaPAJPOHPK_7 (original name was: gnl|Prokka|PAJPOHPK_7); gnlProkkaPAJPOHPK_8 (original name was: gnl|Prokka|PAJPOHPK_8); gnlProkkaPAJPOHPK_9 (original name was: gnl|Prokka|PAJPOHPK_9); gnlProkkaPAJPOHPK_10 (original name was: gnl|Prokka|PAJPOHPK_10); gnlProkkaPAJPOHPK_11 (original name was: gnl|Prokka|PAJPOHPK_11); gnlProkkaPAJPOHPK_12 (original name was: gnl|Prokka|PAJPOHPK_12); gnlProkkaPAJPOHPK_13 (original name was: gnl|Prokka|PAJPOHPK_13); gnlProkkaPAJPOHPK_15 (original name was: gnl|Prokka|PAJPOHPK_15); gnlProkkaPAJPOHPK_16 (original name was: gnl|Prokka|PAJPOHPK_16); gnlProkkaPAJPOHPK_17 (original name was: gnl|Prokka|PAJPOHPK_17); gnlProkkaPAJPOHPK_18 (original name was: gnl|Prokka|PAJPOHPK_18); gnlProkkaPAJPOHPK_19 (original name was: gnl|Prokka|PAJPOHPK_19); gnlProkkaPAJPOHPK_20 (original name was: gnl|Prokka|PAJPOHPK_20); gnlProkkaPAJPOHPK_21 (original name was: gnl|Prokka|PAJPOHPK_21); gnlProkkaPAJPOHPK_22 (original name was: gnl|Prokka|PAJPOHPK_22); gnlProkkaPAJPOHPK_23 (original name was: gnl|Prokka|PAJPOHPK_23); gnlProkkaPAJPOHPK_24 (original name was: gnl|Prokka|PAJPOHPK_24); gnlProkkaPAJPOHPK_26 (original name was: gnl|Prokka|PAJPOHPK_26); gnlProkkaPAJPOHPK_28 (original name was: gnl|Prokka|PAJPOHPK_28); gnlProkkaPAJPOHPK_30 (original name was: gnl|Prokka|PAJPOHPK_30); gnlProkkaPAJPOHPK_33 (original name was: gnl|Prokka|PAJPOHPK_33); gnlProkkaPAJPOHPK_34 (original name was: gnl|Prokka|PAJPOHPK_34); gnlProkkaPAJPOHPK_35 (original name was: gnl|Prokka|PAJPOHPK_35); gnlProkkaPAJPOHPK_36 (original name was: gnl|Prokka|PAJPOHPK_36); gnlProkkaPAJPOHPK_37 (original name was: gnl|Prokka|PAJPOHPK_37); gnlProkkaPAJPOHPK_42 (original name was: gnl|Prokka|PAJPOHPK_42); gnlProkkaPAJPOHPK_47 (original name was: gnl|Prokka|PAJPOHPK_47); gnlProkkaPAJPOHPK_48 (original name was: gnl|Prokka|PAJPOHPK_48); gnlProkkaPAJPOHPK_49 (original name was: gnl|Prokka|PAJPOHPK_49); gnlProkkaPAJPOHPK_51 (original name was: gnl|Prokka|PAJPOHPK_51); gnlProkkaPAJPOHPK_52 (original name was: gnl|Prokka|PAJPOHPK_52); gnlProkkaPAJPOHPK_53 (original name was: gnl|Prokka|PAJPOHPK_53); gnlProkkaPAJPOHPK_54 (original name was: gnl|Prokka|PAJPOHPK_54); gnlProkkaPAJPOHPK_55 (original name was: gnl|Prokka|PAJPOHPK_55); gnlProkkaPAJPOHPK_56 (original name was: gnl|Prokka|PAJPOHPK_56); gnlProkkaPAJPOHPK_57 (original name was: gnl|Prokka|PAJPOHPK_57); gnlProkkaPAJPOHPK_58 (original name was: gnl|Prokka|PAJPOHPK_58); gnlProkkaPAJPOHPK_59 (original name was: gnl|Prokka|PAJPOHPK_59); gnlProkkaPAJPOHPK_60 (original name was: gnl|Prokka|PAJPOHPK_60); gnlProkkaPAJPOHPK_61 (original name was: gnl|Prokka|PAJPOHPK_61); gnlProkkaPAJPOHPK_62 (original name was: gnl|Prokka|PAJPOHPK_62); gnlProkkaPAJPOHPK_63 (original name was: gnl|Prokka|PAJPOHPK_63); gnlProkkaPAJPOHPK_64 (original name was: gnl|Prokka|PAJPOHPK_64); gnlProkkaPAJPOHPK_65 (original name was: gnl|Prokka|PAJPOHPK_65); gnlProkkaPAJPOHPK_66 (original name was: gnl|Prokka|PAJPOHPK_66); gnlProkkaPAJPOHPK_67 (original name was: gnl|Prokka|PAJPOHPK_67); gnlProkkaPAJPOHPK_68 (original name was: gnl|Prokka|PAJPOHPK_68); gnlProkkaPAJPOHPK_69 (original name was: gnl|Prokka|PAJPOHPK_69); gnlProkkaPAJPOHPK_71 (original name was: gnl|Prokka|PAJPOHPK_71); gnlProkkaPAJPOHPK_72 (original name was: gnl|Prokka|PAJPOHPK_72)

Compact view

gnlProkkaPAJPOHPK_1 - Region 1 - RiPP-like

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Location: 67,550 - 79,700 nt. (total: 12,151 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPAJPOHPK_5 - Region 1 - terpene

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Location: 26,193 - 47,074 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPAJPOHPK_27 - Region 1 - T3PKS

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Location: 346,161 - 371,834 nt. (total: 25,674 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPAJPOHPK_50 - Region 1 - cyclic-lactone-autoinducer

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Location: 7,118 - 27,823 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.