GCA_025190015.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaDPNELIAC_49 (original name was: gnl|Prokka|DPNELIAC_49)

Region	Type	From	To	Most similar known cluster		Similarity
Region 35.1	T3PKS	4,892	46,061

gnlProkkaDPNELIAC_182 (original name was: gnl|Prokka|DPNELIAC_182)

Region	Type	From	To	Most similar known cluster		Similarity
Region 94.1	terpene	28,395	49,276

gnlProkkaDPNELIAC_273 (original name was: gnl|Prokka|DPNELIAC_273)

Region	Type	From	To	Most similar known cluster		Similarity
Region 146.1	cyclic-lactone-autoinducer	1	11,203

Region	Type	From	To	Similarity
Region 35.1	T3PKS	4,892	46,061
Region 94.1	terpene	28,395	49,276
Region 146.1	cyclic-lactone-autoinducer	1	11,203

Compact view

gnlProkkaDPNELIAC_49 - Region 1 - T3PKS

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Location: 4,892 - 46,061 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDPNELIAC_182 - Region 1 - terpene

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Location: 28,395 - 49,276 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDPNELIAC_273 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 11,203 nt. (total: 11,203 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.