Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_025190745.1	Lacticaseibacillus paracasei	CIRM-BIA 662	SAMN10365440	1974	-	-	0	0	0	2	2.00
2	GCA_000410115.1	Lacticaseibacillus paracasei subsp. paracasei Lpp48	Lpp48	SAMN02641496	1996	-	-	692	0	0	1	1.00
3	GCA_041734185.1	Lacticaseibacillus paracasei	MGL98	SAMN43028860	2024-07-12	South Korea	-	693	0	0	1	1.00
4	GCA_041893825.1	Lacticaseibacillus paracasei	FMT2	SAMN43472422	2024	South Korea: Daegu	-	693	0	0	1	1.00
5	GCA_046116425.1	Lacticaseibacillus paracasei	M115-8W-2	SAMN38225291	2022	Taiwan	Homo sapiens	695	0	0	1	1.00
6	GCA_014905075.1	Lacticaseibacillus paracasei	NFFJ04	SAMN14444968	2018-11	South Korea: Sangju	-	696	0	0	1	1.00
7	GCA_000410395.1	Lacticaseibacillus paracasei subsp. paracasei Lpp41	Lpp41	SAMN02469724	1995	-	-	697	0	0	2	2.00
8	GCA_008868525.1	Lacticaseibacillus paracasei	BIO5452	SAMN12856540	-	-	-	697	0	0	2	2.00
9	GCA_025190765.1	Lacticaseibacillus paracasei	CIRM-BIA 1511	SAMN10365436	1987	Spain	-	697	0	0	2	2.00
10	GCA_033815995.1	Lacticaseibacillus paracasei	YE01	SAMN37887709	-	China	-	697	0	0	1	1.00
11	GCA_036762765.1	Lacticaseibacillus paracasei	1567_IL3212	SAMN37904769	-	-	animal	697	0	0	2	2.00
12	GCA_036762785.1	Lacticaseibacillus paracasei	1571-2_IL3211	SAMN37904772	-	-	animal	697	0	0	2	2.00
13	GCA_039566745.1	Lacticaseibacillus paracasei	Z08	SAMN41162774	2022-10-11	Slovakia	-	697	0	0	2	2.00
14	GCA_039615445.1	Lacticaseibacillus paracasei	NKM 5.4	SAMN41068727	2016-02	Viet Nam: Khanh Hoa	-	697	0	0	2	2.00
15	GCA_044905105.1	Lacticaseibacillus paracasei	E	SAMN44286705	-	-	-	697	0	0	1	1.00
16	GCA_000410135.1	Lacticaseibacillus paracasei subsp. paracasei Lpp17	Lpp17	SAMN02469707	1987	-	-	698	0	0	2	2.00
17	GCA_000410175.1	Lacticaseibacillus paracasei subsp. paracasei Lpp225	Lpp225	SAMN02469715	2009	-	-	698	0	0	2	2.00
18	GCA_028206475.1	Lacticaseibacillus paracasei	SRCM217440	SAMN32670666	2022-07	South Korea:Sunchang	-	698	0	0	1	1.00
19	GCA_028878315.1	Lacticaseibacillus paracasei	DSM 4905	SAMN23708196	2012-01-30	Italy	Homo sapiens	698	0	0	2	2.00
20	GCA_031630235.1	Lacticaseibacillus paracasei	69Bis	SAMN30173654	2012-03-01	Algeria: Sidi Okba region, Biskra.	goat	698	0	0	2	2.00
21	GCA_044740695.1	Lacticaseibacillus paracasei	E11.5	SAMN44487087	-	Ethiopia	-	698	0	0	1	1.00
22	GCA_001191565.1	Lacticaseibacillus paracasei	CAUH35	SAMN03892742	2008-08	China: Xinjiang Uighur Autonomous Region	-	699	0	0	1	1.00
23	GCA_018917305.1	Lacticaseibacillus paracasei	N53	SAMN19374054	2019-08	China: Suzhou	Macaca fascicularis	699	0	0	2	2.00
24	GCA_025190685.1	Lacticaseibacillus paracasei	CIRM-BIA 1445	SAMN10365442	1996	France	-	699	0	0	2	2.00
25	GCA_003367655.1	Lacticaseibacillus paracasei subsp. paracasei	KMB_598	SAMN09398938	2013	Slovakia	-	700	0	0	2	2.00
26	GCA_003712385.1	Lacticaseibacillus paracasei	FAM18119	SAMN04088865	2003	Switzerland	-	700	0	0	2	2.00
27	GCA_018257175.1	Lacticaseibacillus paracasei	Dm-2019-60	SAMN17146146	2019	USA: Ithaca, NY	Drosophila melanogaster	700	0	0	2	2.00
28	GCA_018729425.1	Lacticaseibacillus paracasei	MYD3	SAMN16551136	2017	Indonesia: Yogyakarta	-	700	0	0	2	2.00
29	GCA_025137495.1	Lacticaseibacillus paracasei	L1	SAMN20355457	2015-10-10	China:Jinzhou	-	700	0	0	1	1.00
30	GCA_003199005.1	Lacticaseibacillus paracasei	Lpc10	SAMN09283999	2014	Argentina: Provincia de Rio Negro	-	701	0	0	1	1.00
31	GCA_025190665.1	Lacticaseibacillus paracasei	CIRM-BIA 655	SAMN10365443	1995	France	-	701	0	0	2	2.00
32	GCA_025544855.1	Lacticaseibacillus paracasei	M38	SAMN29905902	2019-01	Chile:Santiago	Homo sapiens	701	0	0	2	2.00
33	GCA_030360845.1	Lacticaseibacillus paracasei	TOM.1339	SAMN35776905	2022-11	Russia: Altai	-	701	0	0	2	2.00
34	GCA_034555135.1	Lacticaseibacillus paracasei	BF3	SAMN38857134	2021	Spain:Galicia	Brachionus plicatilis	701	0	0	2	2.00
35	GCA_036762895.1	Lacticaseibacillus paracasei	1311_IL3157	SAMN37904766	-	-	animal	701	0	0	2	2.00
36	GCA_040459555.1	Lacticaseibacillus paracasei	T1901	SAMN31372292	2020-11-17	Thailand	-	701	0	0	2	2.00
37	GCA_040459585.1	Lacticaseibacillus paracasei	T1301	SAMN31372290	2020-11-17	Thailand	-	701	0	0	2	2.00
38	GCA_040459615.1	Lacticaseibacillus paracasei	T1304	SAMN31372291	2020-11-17	Thailand	-	701	0	0	2	2.00
39	GCA_040459675.1	Lacticaseibacillus paracasei	T0902	SAMN31372289	2020-11-17	Thailand	-	701	0	0	2	2.00
40	GCA_040822445.1	Lacticaseibacillus paracasei subsp. paracasei	BS2-PB5	SAMN42029631	2022-02-20	Indonesia: Tangerang	Homo sapiens	701	0	0	1	1.00
41	GCA_047785155.1	Lacticaseibacillus paracasei	SRCM212209	SAMN46082883	2020-10	South Korea:Sunchang	-	701	0	0	1	1.00
42	GCA_000309685.1	Lacticaseibacillus paracasei	T71499	SAMN02472001	-	Finland	Homo sapiens	702	0	0	2	2.00
43	GCA_000409815.1	Lacticaseibacillus paracasei subsp. paracasei Lpp230	Lpp230	SAMN02469722	-	-	Homo sapiens	702	0	0	2	2.00
44	GCA_000410275.1	Lacticaseibacillus paracasei subsp. paracasei CNCM I-4270	CNCM I-4270	SAMN02469729	2000	-	-	702	0	0	2	2.00
45	GCA_003712345.1	Lacticaseibacillus paracasei	FAM18121	SAMN04088866	2003	Switzerland	-	702	0	0	2	2.00
46	GCA_015476075.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0245	SAMN16657550	-	South Korea	-	702	0	0	1	1.00
47	GCA_019175405.1	Lacticaseibacillus paracasei subsp. paracasei	GR0548	SAMN18436391	2008-12	Taiwan	-	702	0	0	1	1.00
48	GCA_022131015.1	Lacticaseibacillus paracasei	CJNU 1877	SAMN21399231	2020-02-25	South Korea	-	702	0	0	2	2.00
49	GCA_022588775.1	Lacticaseibacillus paracasei	BCRC-16100	SAMN22548461	2018-10-01	Taiwan: GenMont Biotech (Tainan)	Homo sapiens	702	0	0	1	1.00
50	GCA_025190525.1	Lacticaseibacillus paracasei	CIRM-BIA 1517	SAMN10365450	2012	France	-	702	0	0	2	2.00
51	GCA_025190545.1	Lacticaseibacillus paracasei	CIRM-BIA 2129	SAMN10365447	1993	-	-	702	0	0	2	2.00
52	GCA_025215665.1	Lacticaseibacillus paracasei	ALAC-4	SAMN10688387	-	-	-	702	0	0	1	1.00
53	GCA_030361225.1	Lacticaseibacillus paracasei	TOM.262	SAMN35776883	2022-04	Russia: North Ossetia	-	702	0	0	2	2.00
54	GCA_031348425.1	Lacticaseibacillus paracasei	KCKM 0245	SAMN37235621	2016-07-08	South Korea	-	702	0	0	1	1.00
55	GCA_031461095.1	Lacticaseibacillus paracasei	KCKM 0992	SAMN37256209	2015	South Korea	-	702	0	0	1	1.00
56	GCA_034555155.1	Lacticaseibacillus paracasei	RT4	SAMN38857191	2021	Spain:Galicia	Brachionus plicatilis	702	0	0	2	2.00
57	GCA_039566705.1	Lacticaseibacillus paracasei	G187	SAMN41162751	2007	Slovakia	-	702	0	0	2	2.00
58	GCA_040459635.1	Lacticaseibacillus paracasei	T0602	SAMN31372287	2020-11-17	Thailand	-	702	0	0	2	2.00
59	GCA_040459685.1	Lacticaseibacillus paracasei	T0601	SAMN31372286	2020-11-17	Thailand	-	702	0	0	2	2.00
60	GCA_049163355.1	Lacticaseibacillus paracasei	FD1	SAMN47427496	2019-12	Malaysia: Kelantan	-	702	0	0	1	1.00
61	GCA_002148875.1	Lacticaseibacillus paracasei	DPC2071	SAMN05949321	1988-11-08	Ireland	-	703	0	0	2	2.00
62	GCA_003712395.1	Lacticaseibacillus paracasei	FAM18113	SAMN04088864	2003	Switzerland	-	703	0	0	2	2.00
63	GCA_003712745.1	Lacticaseibacillus paracasei	FAM6012	SAMN04088890	-	Switzerland	-	703	0	0	2	2.00
64	GCA_015476155.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0625	SAMN16668564	-	South Korea	-	703	0	0	1	1.00
65	GCA_016887805.1	Lacticaseibacillus paracasei	4186	SAMN17562095	2014-04-17	Italy	-	703	0	0	2	2.00
66	GCA_023470655.1	Lacticaseibacillus paracasei	MA3	SAMN27413142	2019-12-08	South Africa: Durban	-	703	0	0	2	2.00
67	GCA_030418055.1	Lacticaseibacillus paracasei	PWN_T9	SAMN36288183	2017-11	Nigeria: Lagos	Elaesis guineensis	703	0	0	2	2.00
68	GCA_030540905.1	Lacticaseibacillus paracasei	11w	SAMN36403201	2022-01-26	Lithuania: Vilnius	-	703	0	0	2	2.00
69	GCA_040536905.1	Lacticaseibacillus paracasei	z15	SAMN42017790	2024-02-15	China:Jilin	-	703	0	0	1	1.00
70	GCA_000155515.2	Lacticaseibacillus paracasei subsp. paracasei 8700:2	362.5013889	SAMN02463682	-	-	Homo sapiens	704	0	0	1	1.00
71	GCA_000409875.1	Lacticaseibacillus paracasei subsp. paracasei Lpp46	Lpp46	SAMN02469709	1996	-	-	704	0	0	2	2.00
72	GCA_000409895.1	Lacticaseibacillus paracasei subsp. paracasei Lpp226	Lpp226	SAMN02469716	2009	-	-	704	0	0	2	2.00
73	GCA_000410015.1	Lacticaseibacillus paracasei subsp. paracasei Lpp221	Lpp221	SAMN02469717	2008	-	Homo sapiens	704	0	0	2	2.00
74	GCA_000410035.1	Lacticaseibacillus paracasei subsp. paracasei Lpp49	Lpp49	SAMN02469726	1996	-	-	704	0	0	2	2.00
75	GCA_000410055.1	Lacticaseibacillus paracasei subsp. paracasei Lpp227	Lpp227	SAMN02641494	2008	-	Homo sapiens	704	0	0	2	2.00
76	GCA_000958485.1	Lacticaseibacillus paracasei NRIC 1981	-	SAMD00000558	-	-	-	704	0	0	2	2.00
77	GCA_003712525.1	Lacticaseibacillus paracasei	FAM18133	SAMN04088872	2003	Switzerland	-	704	0	0	2	2.00
78	GCA_003712605.1	Lacticaseibacillus paracasei	FAM19353	SAMN04088879	1990	Switzerland	-	704	0	0	2	2.00
79	GCA_003712645.1	Lacticaseibacillus paracasei	FAM22276	SAMN04088881	1990	Switzerland	-	704	0	0	2	2.00
80	GCA_003712935.1	Lacticaseibacillus paracasei	FAM3248	SAMN04088887	1990	Switzerland	-	704	0	0	2	2.00
81	GCA_003712965.1	Lacticaseibacillus paracasei	FAM6410	SAMN04088893	-	Switzerland	-	704	0	0	2	2.00
82	GCA_015693945.1	Lacticaseibacillus paracasei subsp. tolerans	ZY-1	SAMN16861159	2017-06	China	-	704	0	0	1	1.00
83	GCA_018064185.1	Lacticaseibacillus paracasei	HM1	SAMN18644302	2015	India:Punjab	-	704	0	0	1	1.00
84	GCA_018966985.1	Lacticaseibacillus paracasei	MA2	SAMN19670536	2019-12-08	South Africa: Durban	-	704	0	0	2	2.00
85	GCA_020540265.1	Lacticaseibacillus paracasei	MSK.19.8	SAMN22165146	-	USA:New York	Homo sapiens	704	0	0	2	2.00
86	GCA_021650835.1	Lacticaseibacillus paracasei subsp. paracasei	GR0562	SAMN25145123	2007-12	Taiwan	Homo sapiens	704	0	0	1	1.00
87	GCA_024329455.1	Lacticaseibacillus paracasei	Kef-w14	SAMN18720967	2020-10-16	Singapore	-	704	0	0	2	2.00
88	GCA_025190565.1	Lacticaseibacillus paracasei	CIRM-BIA 2128	SAMN10365446	1993	-	-	704	0	0	2	2.00
89	GCA_028609745.1	Lacticaseibacillus paracasei	CLP-Y5	SAMN14686377	2018-12	China	-	704	0	0	1	1.00
90	GCA_037414215.1	Lacticaseibacillus paracasei	LPC100	SAMN39212581	1998	Italy: Universit Cattolica di Piacenza	Homo sapiens	704	0	0	1	1.00
91	GCA_042449115.1	Lacticaseibacillus paracasei subsp. paracasei	SMB092	SAMN43834269	2013	South Korea	-	704	0	0	1	1.00
92	GCA_000014525.1	Lacticaseibacillus paracasei ATCC 334	ATCC 334	SAMN02598528	-	-	-	705	0	0	1	1.00
93	GCA_000019245.3	Lacticaseibacillus paracasei	Zhang	SAMN02603933	-	China: Inner Mongolia	-	705	0	0	1	1.00
94	GCA_000410095.1	Lacticaseibacillus paracasei subsp. paracasei CNCM I-2877	CNCM I-2877	SAMN02641492	2000	-	-	705	0	0	2	2.00
95	GCA_002115655.1	Lacticaseibacillus paracasei	DmW_181	SAMN06767179	2013-07	USA: New York	Drosophila	705	0	0	2	2.00
96	GCA_002257625.1	Lacticaseibacillus paracasei	TK1501	SAMN05921089	2015	China:Inner Mongolia	-	705	0	0	1	1.00
97	GCA_003627255.1	Lacticaseibacillus paracasei	ZFM54	SAMN07305422	2011-08-03	China:Zhejiang maternal and child health hospital	Homo sapiens	705	0	0	1	1.00
98	GCA_003712565.1	Lacticaseibacillus paracasei	FAM19317	SAMN04088878	1990	Switzerland	-	705	0	0	2	2.00
99	GCA_003712835.1	Lacticaseibacillus paracasei	FAM8407	SAMN04088897	-	Switzerland	-	705	0	0	2	2.00
100	GCA_003712905.1	Lacticaseibacillus paracasei	FAM3228	SAMN04088886	-	Switzerland	-	705	0	0	1	1.00