GCA_025190945.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaIFNIJOJJ_14 (original name was: gnl|Prokka|IFNIJOJJ_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	RiPP-like	1	4,495	gassericin T	RiPP	55%

gnlProkkaIFNIJOJJ_45 (original name was: gnl|Prokka|IFNIJOJJ_45)

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	RiPP-like	29,656	37,183	gassericin T	RiPP	33%

No secondary metabolite regions were found in these records:: gnlProkkaIFNIJOJJ_1 (original name was: gnl|Prokka|IFNIJOJJ_1); gnlProkkaIFNIJOJJ_2 (original name was: gnl|Prokka|IFNIJOJJ_2); gnlProkkaIFNIJOJJ_3 (original name was: gnl|Prokka|IFNIJOJJ_3); gnlProkkaIFNIJOJJ_4 (original name was: gnl|Prokka|IFNIJOJJ_4); gnlProkkaIFNIJOJJ_5 (original name was: gnl|Prokka|IFNIJOJJ_5); gnlProkkaIFNIJOJJ_6 (original name was: gnl|Prokka|IFNIJOJJ_6); gnlProkkaIFNIJOJJ_7 (original name was: gnl|Prokka|IFNIJOJJ_7); gnlProkkaIFNIJOJJ_8 (original name was: gnl|Prokka|IFNIJOJJ_8); gnlProkkaIFNIJOJJ_9 (original name was: gnl|Prokka|IFNIJOJJ_9); gnlProkkaIFNIJOJJ_10 (original name was: gnl|Prokka|IFNIJOJJ_10); gnlProkkaIFNIJOJJ_11 (original name was: gnl|Prokka|IFNIJOJJ_11); gnlProkkaIFNIJOJJ_12 (original name was: gnl|Prokka|IFNIJOJJ_12); gnlProkkaIFNIJOJJ_13 (original name was: gnl|Prokka|IFNIJOJJ_13); gnlProkkaIFNIJOJJ_15 (original name was: gnl|Prokka|IFNIJOJJ_15); gnlProkkaIFNIJOJJ_16 (original name was: gnl|Prokka|IFNIJOJJ_16); gnlProkkaIFNIJOJJ_18 (original name was: gnl|Prokka|IFNIJOJJ_18); gnlProkkaIFNIJOJJ_19 (original name was: gnl|Prokka|IFNIJOJJ_19); gnlProkkaIFNIJOJJ_20 (original name was: gnl|Prokka|IFNIJOJJ_20); gnlProkkaIFNIJOJJ_21 (original name was: gnl|Prokka|IFNIJOJJ_21); gnlProkkaIFNIJOJJ_22 (original name was: gnl|Prokka|IFNIJOJJ_22); gnlProkkaIFNIJOJJ_23 (original name was: gnl|Prokka|IFNIJOJJ_23); gnlProkkaIFNIJOJJ_24 (original name was: gnl|Prokka|IFNIJOJJ_24); gnlProkkaIFNIJOJJ_25 (original name was: gnl|Prokka|IFNIJOJJ_25); gnlProkkaIFNIJOJJ_27 (original name was: gnl|Prokka|IFNIJOJJ_27); gnlProkkaIFNIJOJJ_29 (original name was: gnl|Prokka|IFNIJOJJ_29); gnlProkkaIFNIJOJJ_32 (original name was: gnl|Prokka|IFNIJOJJ_32); gnlProkkaIFNIJOJJ_33 (original name was: gnl|Prokka|IFNIJOJJ_33); gnlProkkaIFNIJOJJ_37 (original name was: gnl|Prokka|IFNIJOJJ_37); gnlProkkaIFNIJOJJ_43 (original name was: gnl|Prokka|IFNIJOJJ_43); gnlProkkaIFNIJOJJ_50 (original name was: gnl|Prokka|IFNIJOJJ_50); gnlProkkaIFNIJOJJ_52 (original name was: gnl|Prokka|IFNIJOJJ_52); gnlProkkaIFNIJOJJ_54 (original name was: gnl|Prokka|IFNIJOJJ_54)

Compact view

gnlProkkaIFNIJOJJ_14 - Region 1 - RiPP-like

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Location: 1 - 4,495 nt. (total: 4,495 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaIFNIJOJJ_45 - Region 1 - RiPP-like