GCA_025190965.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaHNAHMFAC_13 (original name was: gnl|Prokka|HNAHMFAC_13)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	RiPP-like	1	4,150	gassericin T	RiPP	44%

gnlProkkaHNAHMFAC_14 (original name was: gnl|Prokka|HNAHMFAC_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	RiPP-like	43,789	54,208

gnlProkkaHNAHMFAC_60 (original name was: gnl|Prokka|HNAHMFAC_60)

Region	Type	From	To	Most similar known cluster		Similarity
Region 45.1	RiPP-like	32,749	39,936	gassericin T	RiPP	22%

No secondary metabolite regions were found in these records:: gnlProkkaHNAHMFAC_2 (original name was: gnl|Prokka|HNAHMFAC_2); gnlProkkaHNAHMFAC_6 (original name was: gnl|Prokka|HNAHMFAC_6); gnlProkkaHNAHMFAC_7 (original name was: gnl|Prokka|HNAHMFAC_7); gnlProkkaHNAHMFAC_8 (original name was: gnl|Prokka|HNAHMFAC_8); gnlProkkaHNAHMFAC_10 (original name was: gnl|Prokka|HNAHMFAC_10); gnlProkkaHNAHMFAC_12 (original name was: gnl|Prokka|HNAHMFAC_12); gnlProkkaHNAHMFAC_15 (original name was: gnl|Prokka|HNAHMFAC_15); gnlProkkaHNAHMFAC_16 (original name was: gnl|Prokka|HNAHMFAC_16); gnlProkkaHNAHMFAC_17 (original name was: gnl|Prokka|HNAHMFAC_17); gnlProkkaHNAHMFAC_18 (original name was: gnl|Prokka|HNAHMFAC_18); gnlProkkaHNAHMFAC_19 (original name was: gnl|Prokka|HNAHMFAC_19); gnlProkkaHNAHMFAC_20 (original name was: gnl|Prokka|HNAHMFAC_20); gnlProkkaHNAHMFAC_21 (original name was: gnl|Prokka|HNAHMFAC_21); gnlProkkaHNAHMFAC_22 (original name was: gnl|Prokka|HNAHMFAC_22); gnlProkkaHNAHMFAC_23 (original name was: gnl|Prokka|HNAHMFAC_23); gnlProkkaHNAHMFAC_24 (original name was: gnl|Prokka|HNAHMFAC_24); gnlProkkaHNAHMFAC_25 (original name was: gnl|Prokka|HNAHMFAC_25); gnlProkkaHNAHMFAC_26 (original name was: gnl|Prokka|HNAHMFAC_26); gnlProkkaHNAHMFAC_27 (original name was: gnl|Prokka|HNAHMFAC_27); gnlProkkaHNAHMFAC_29 (original name was: gnl|Prokka|HNAHMFAC_29); gnlProkkaHNAHMFAC_30 (original name was: gnl|Prokka|HNAHMFAC_30); gnlProkkaHNAHMFAC_31 (original name was: gnl|Prokka|HNAHMFAC_31); gnlProkkaHNAHMFAC_32 (original name was: gnl|Prokka|HNAHMFAC_32); gnlProkkaHNAHMFAC_33 (original name was: gnl|Prokka|HNAHMFAC_33); gnlProkkaHNAHMFAC_34 (original name was: gnl|Prokka|HNAHMFAC_34); gnlProkkaHNAHMFAC_37 (original name was: gnl|Prokka|HNAHMFAC_37); gnlProkkaHNAHMFAC_38 (original name was: gnl|Prokka|HNAHMFAC_38); gnlProkkaHNAHMFAC_39 (original name was: gnl|Prokka|HNAHMFAC_39); gnlProkkaHNAHMFAC_40 (original name was: gnl|Prokka|HNAHMFAC_40); gnlProkkaHNAHMFAC_42 (original name was: gnl|Prokka|HNAHMFAC_42); gnlProkkaHNAHMFAC_43 (original name was: gnl|Prokka|HNAHMFAC_43); gnlProkkaHNAHMFAC_44 (original name was: gnl|Prokka|HNAHMFAC_44); gnlProkkaHNAHMFAC_45 (original name was: gnl|Prokka|HNAHMFAC_45); gnlProkkaHNAHMFAC_46 (original name was: gnl|Prokka|HNAHMFAC_46); gnlProkkaHNAHMFAC_47 (original name was: gnl|Prokka|HNAHMFAC_47); gnlProkkaHNAHMFAC_48 (original name was: gnl|Prokka|HNAHMFAC_48); gnlProkkaHNAHMFAC_50 (original name was: gnl|Prokka|HNAHMFAC_50); gnlProkkaHNAHMFAC_51 (original name was: gnl|Prokka|HNAHMFAC_51); gnlProkkaHNAHMFAC_52 (original name was: gnl|Prokka|HNAHMFAC_52); gnlProkkaHNAHMFAC_54 (original name was: gnl|Prokka|HNAHMFAC_54); gnlProkkaHNAHMFAC_57 (original name was: gnl|Prokka|HNAHMFAC_57); gnlProkkaHNAHMFAC_59 (original name was: gnl|Prokka|HNAHMFAC_59); gnlProkkaHNAHMFAC_66 (original name was: gnl|Prokka|HNAHMFAC_66); gnlProkkaHNAHMFAC_69 (original name was: gnl|Prokka|HNAHMFAC_69)

Compact view

gnlProkkaHNAHMFAC_13 - Region 1 - RiPP-like

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Location: 1 - 4,150 nt. (total: 4,150 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaHNAHMFAC_14 - Region 1 - RiPP-like

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Location: 43,789 - 54,208 nt. (total: 10,420 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHNAHMFAC_60 - Region 1 - RiPP-like

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Location: 32,749 - 39,936 nt. (total: 7,188 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1