GCA_025193725.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMACHMMDM_40 (original name was: gnl|Prokka|MACHMMDM_40)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	lanthipeptide-class-iv	48,926	68,929

gnlProkkaMACHMMDM_59 (original name was: gnl|Prokka|MACHMMDM_59)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	RiPP-like	69,716	80,888

gnlProkkaMACHMMDM_62 (original name was: gnl|Prokka|MACHMMDM_62)

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	lanthipeptide-class-iii	5,331	27,832

Region	Type	From	To	Similarity
Region 14.1	lanthipeptide-class-iv	48,926	68,929
Region 33.1	RiPP-like	69,716	80,888
Region 36.1	lanthipeptide-class-iii	5,331	27,832

No secondary metabolite regions were found in these records:: gnlProkkaMACHMMDM_1 (original name was: gnl|Prokka|MACHMMDM_1); gnlProkkaMACHMMDM_2 (original name was: gnl|Prokka|MACHMMDM_2); gnlProkkaMACHMMDM_4 (original name was: gnl|Prokka|MACHMMDM_4); gnlProkkaMACHMMDM_6 (original name was: gnl|Prokka|MACHMMDM_6); gnlProkkaMACHMMDM_10 (original name was: gnl|Prokka|MACHMMDM_10); gnlProkkaMACHMMDM_13 (original name was: gnl|Prokka|MACHMMDM_13); gnlProkkaMACHMMDM_15 (original name was: gnl|Prokka|MACHMMDM_15); gnlProkkaMACHMMDM_16 (original name was: gnl|Prokka|MACHMMDM_16); gnlProkkaMACHMMDM_35 (original name was: gnl|Prokka|MACHMMDM_35); gnlProkkaMACHMMDM_36 (original name was: gnl|Prokka|MACHMMDM_36); gnlProkkaMACHMMDM_37 (original name was: gnl|Prokka|MACHMMDM_37); gnlProkkaMACHMMDM_38 (original name was: gnl|Prokka|MACHMMDM_38); gnlProkkaMACHMMDM_39 (original name was: gnl|Prokka|MACHMMDM_39); gnlProkkaMACHMMDM_41 (original name was: gnl|Prokka|MACHMMDM_41); gnlProkkaMACHMMDM_42 (original name was: gnl|Prokka|MACHMMDM_42); gnlProkkaMACHMMDM_43 (original name was: gnl|Prokka|MACHMMDM_43); gnlProkkaMACHMMDM_44 (original name was: gnl|Prokka|MACHMMDM_44); gnlProkkaMACHMMDM_45 (original name was: gnl|Prokka|MACHMMDM_45); gnlProkkaMACHMMDM_46 (original name was: gnl|Prokka|MACHMMDM_46); gnlProkkaMACHMMDM_47 (original name was: gnl|Prokka|MACHMMDM_47); gnlProkkaMACHMMDM_48 (original name was: gnl|Prokka|MACHMMDM_48); gnlProkkaMACHMMDM_49 (original name was: gnl|Prokka|MACHMMDM_49); gnlProkkaMACHMMDM_50 (original name was: gnl|Prokka|MACHMMDM_50); gnlProkkaMACHMMDM_51 (original name was: gnl|Prokka|MACHMMDM_51); gnlProkkaMACHMMDM_52 (original name was: gnl|Prokka|MACHMMDM_52); gnlProkkaMACHMMDM_53 (original name was: gnl|Prokka|MACHMMDM_53); gnlProkkaMACHMMDM_54 (original name was: gnl|Prokka|MACHMMDM_54); gnlProkkaMACHMMDM_55 (original name was: gnl|Prokka|MACHMMDM_55); gnlProkkaMACHMMDM_56 (original name was: gnl|Prokka|MACHMMDM_56); gnlProkkaMACHMMDM_57 (original name was: gnl|Prokka|MACHMMDM_57); gnlProkkaMACHMMDM_58 (original name was: gnl|Prokka|MACHMMDM_58); gnlProkkaMACHMMDM_60 (original name was: gnl|Prokka|MACHMMDM_60); gnlProkkaMACHMMDM_61 (original name was: gnl|Prokka|MACHMMDM_61); gnlProkkaMACHMMDM_63 (original name was: gnl|Prokka|MACHMMDM_63); gnlProkkaMACHMMDM_64 (original name was: gnl|Prokka|MACHMMDM_64); gnlProkkaMACHMMDM_65 (original name was: gnl|Prokka|MACHMMDM_65); gnlProkkaMACHMMDM_66 (original name was: gnl|Prokka|MACHMMDM_66); gnlProkkaMACHMMDM_68 (original name was: gnl|Prokka|MACHMMDM_68); gnlProkkaMACHMMDM_69 (original name was: gnl|Prokka|MACHMMDM_69); gnlProkkaMACHMMDM_70 (original name was: gnl|Prokka|MACHMMDM_70); gnlProkkaMACHMMDM_71 (original name was: gnl|Prokka|MACHMMDM_71); gnlProkkaMACHMMDM_72 (original name was: gnl|Prokka|MACHMMDM_72); gnlProkkaMACHMMDM_73 (original name was: gnl|Prokka|MACHMMDM_73); gnlProkkaMACHMMDM_75 (original name was: gnl|Prokka|MACHMMDM_75); gnlProkkaMACHMMDM_76 (original name was: gnl|Prokka|MACHMMDM_76); gnlProkkaMACHMMDM_77 (original name was: gnl|Prokka|MACHMMDM_77); gnlProkkaMACHMMDM_79 (original name was: gnl|Prokka|MACHMMDM_79); gnlProkkaMACHMMDM_80 (original name was: gnl|Prokka|MACHMMDM_80); gnlProkkaMACHMMDM_82 (original name was: gnl|Prokka|MACHMMDM_82); gnlProkkaMACHMMDM_83 (original name was: gnl|Prokka|MACHMMDM_83); gnlProkkaMACHMMDM_84 (original name was: gnl|Prokka|MACHMMDM_84); gnlProkkaMACHMMDM_85 (original name was: gnl|Prokka|MACHMMDM_85); gnlProkkaMACHMMDM_86 (original name was: gnl|Prokka|MACHMMDM_86); gnlProkkaMACHMMDM_88 (original name was: gnl|Prokka|MACHMMDM_88); gnlProkkaMACHMMDM_90 (original name was: gnl|Prokka|MACHMMDM_90); gnlProkkaMACHMMDM_91 (original name was: gnl|Prokka|MACHMMDM_91); gnlProkkaMACHMMDM_92 (original name was: gnl|Prokka|MACHMMDM_92); gnlProkkaMACHMMDM_93 (original name was: gnl|Prokka|MACHMMDM_93); gnlProkkaMACHMMDM_94 (original name was: gnl|Prokka|MACHMMDM_94); gnlProkkaMACHMMDM_96 (original name was: gnl|Prokka|MACHMMDM_96); gnlProkkaMACHMMDM_97 (original name was: gnl|Prokka|MACHMMDM_97); gnlProkkaMACHMMDM_98 (original name was: gnl|Prokka|MACHMMDM_98); gnlProkkaMACHMMDM_99 (original name was: gnl|Prokka|MACHMMDM_99); gnlProkkaMACHMMDM_101 (original name was: gnl|Prokka|MACHMMDM_101); gnlProkkaMACHMMDM_102 (original name was: gnl|Prokka|MACHMMDM_102); gnlProkkaMACHMMDM_103 (original name was: gnl|Prokka|MACHMMDM_103); gnlProkkaMACHMMDM_105 (original name was: gnl|Prokka|MACHMMDM_105); gnlProkkaMACHMMDM_106 (original name was: gnl|Prokka|MACHMMDM_106); gnlProkkaMACHMMDM_107 (original name was: gnl|Prokka|MACHMMDM_107); gnlProkkaMACHMMDM_110 (original name was: gnl|Prokka|MACHMMDM_110); gnlProkkaMACHMMDM_111 (original name was: gnl|Prokka|MACHMMDM_111); gnlProkkaMACHMMDM_112 (original name was: gnl|Prokka|MACHMMDM_112); gnlProkkaMACHMMDM_114 (original name was: gnl|Prokka|MACHMMDM_114); gnlProkkaMACHMMDM_115 (original name was: gnl|Prokka|MACHMMDM_115); gnlProkkaMACHMMDM_116 (original name was: gnl|Prokka|MACHMMDM_116); gnlProkkaMACHMMDM_119 (original name was: gnl|Prokka|MACHMMDM_119); gnlProkkaMACHMMDM_121 (original name was: gnl|Prokka|MACHMMDM_121); gnlProkkaMACHMMDM_122 (original name was: gnl|Prokka|MACHMMDM_122)

Compact view

gnlProkkaMACHMMDM_40 - Region 1 - lanthipeptide-class-iv

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Location: 48,926 - 68,929 nt. (total: 20,004 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaMACHMMDM_59 - Region 1 - RiPP-like

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Location: 69,716 - 80,888 nt. (total: 11,173 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMACHMMDM_62 - Region 1 - lanthipeptide-class-iii

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Location: 5,331 - 27,832 nt. (total: 22,502 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iii: (micKC and not PKS_KS)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.