GCA_025211235.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaPDCPOIID_161 (original name was: gnl|Prokka|PDCPOIID_161)

Region	Type	From	To	Most similar known cluster		Similarity
Region 121.1	RiPP-like	1	6,516

gnlProkkaPDCPOIID_167 (original name was: gnl|Prokka|PDCPOIID_167)

Region	Type	From	To	Most similar known cluster		Similarity
Region 127.1	RiPP-like	447	10,680

No secondary metabolite regions were found in these records:: gnlProkkaPDCPOIID_1 (original name was: gnl|Prokka|PDCPOIID_1); gnlProkkaPDCPOIID_2 (original name was: gnl|Prokka|PDCPOIID_2); gnlProkkaPDCPOIID_3 (original name was: gnl|Prokka|PDCPOIID_3); gnlProkkaPDCPOIID_4 (original name was: gnl|Prokka|PDCPOIID_4); gnlProkkaPDCPOIID_5 (original name was: gnl|Prokka|PDCPOIID_5); gnlProkkaPDCPOIID_6 (original name was: gnl|Prokka|PDCPOIID_6); gnlProkkaPDCPOIID_7 (original name was: gnl|Prokka|PDCPOIID_7); gnlProkkaPDCPOIID_8 (original name was: gnl|Prokka|PDCPOIID_8); gnlProkkaPDCPOIID_9 (original name was: gnl|Prokka|PDCPOIID_9); gnlProkkaPDCPOIID_10 (original name was: gnl|Prokka|PDCPOIID_10); gnlProkkaPDCPOIID_11 (original name was: gnl|Prokka|PDCPOIID_11); gnlProkkaPDCPOIID_12 (original name was: gnl|Prokka|PDCPOIID_12); gnlProkkaPDCPOIID_13 (original name was: gnl|Prokka|PDCPOIID_13); gnlProkkaPDCPOIID_14 (original name was: gnl|Prokka|PDCPOIID_14); gnlProkkaPDCPOIID_15 (original name was: gnl|Prokka|PDCPOIID_15); gnlProkkaPDCPOIID_16 (original name was: gnl|Prokka|PDCPOIID_16); gnlProkkaPDCPOIID_17 (original name was: gnl|Prokka|PDCPOIID_17); gnlProkkaPDCPOIID_18 (original name was: gnl|Prokka|PDCPOIID_18); gnlProkkaPDCPOIID_19 (original name was: gnl|Prokka|PDCPOIID_19); gnlProkkaPDCPOIID_20 (original name was: gnl|Prokka|PDCPOIID_20); gnlProkkaPDCPOIID_21 (original name was: gnl|Prokka|PDCPOIID_21); gnlProkkaPDCPOIID_22 (original name was: gnl|Prokka|PDCPOIID_22); gnlProkkaPDCPOIID_23 (original name was: gnl|Prokka|PDCPOIID_23); gnlProkkaPDCPOIID_24 (original name was: gnl|Prokka|PDCPOIID_24); gnlProkkaPDCPOIID_25 (original name was: gnl|Prokka|PDCPOIID_25); gnlProkkaPDCPOIID_26 (original name was: gnl|Prokka|PDCPOIID_26); gnlProkkaPDCPOIID_27 (original name was: gnl|Prokka|PDCPOIID_27); gnlProkkaPDCPOIID_28 (original name was: gnl|Prokka|PDCPOIID_28); gnlProkkaPDCPOIID_29 (original name was: gnl|Prokka|PDCPOIID_29); gnlProkkaPDCPOIID_30 (original name was: gnl|Prokka|PDCPOIID_30); gnlProkkaPDCPOIID_31 (original name was: gnl|Prokka|PDCPOIID_31); gnlProkkaPDCPOIID_32 (original name was: gnl|Prokka|PDCPOIID_32); gnlProkkaPDCPOIID_33 (original name was: gnl|Prokka|PDCPOIID_33); gnlProkkaPDCPOIID_34 (original name was: gnl|Prokka|PDCPOIID_34); gnlProkkaPDCPOIID_36 (original name was: gnl|Prokka|PDCPOIID_36); gnlProkkaPDCPOIID_37 (original name was: gnl|Prokka|PDCPOIID_37); gnlProkkaPDCPOIID_38 (original name was: gnl|Prokka|PDCPOIID_38); gnlProkkaPDCPOIID_39 (original name was: gnl|Prokka|PDCPOIID_39); gnlProkkaPDCPOIID_40 (original name was: gnl|Prokka|PDCPOIID_40); gnlProkkaPDCPOIID_41 (original name was: gnl|Prokka|PDCPOIID_41); gnlProkkaPDCPOIID_42 (original name was: gnl|Prokka|PDCPOIID_42); gnlProkkaPDCPOIID_44 (original name was: gnl|Prokka|PDCPOIID_44); gnlProkkaPDCPOIID_45 (original name was: gnl|Prokka|PDCPOIID_45); gnlProkkaPDCPOIID_46 (original name was: gnl|Prokka|PDCPOIID_46); gnlProkkaPDCPOIID_47 (original name was: gnl|Prokka|PDCPOIID_47); gnlProkkaPDCPOIID_48 (original name was: gnl|Prokka|PDCPOIID_48); gnlProkkaPDCPOIID_49 (original name was: gnl|Prokka|PDCPOIID_49); gnlProkkaPDCPOIID_50 (original name was: gnl|Prokka|PDCPOIID_50); gnlProkkaPDCPOIID_51 (original name was: gnl|Prokka|PDCPOIID_51); gnlProkkaPDCPOIID_53 (original name was: gnl|Prokka|PDCPOIID_53); gnlProkkaPDCPOIID_54 (original name was: gnl|Prokka|PDCPOIID_54); gnlProkkaPDCPOIID_55 (original name was: gnl|Prokka|PDCPOIID_55); gnlProkkaPDCPOIID_56 (original name was: gnl|Prokka|PDCPOIID_56); gnlProkkaPDCPOIID_58 (original name was: gnl|Prokka|PDCPOIID_58); gnlProkkaPDCPOIID_59 (original name was: gnl|Prokka|PDCPOIID_59); gnlProkkaPDCPOIID_60 (original name was: gnl|Prokka|PDCPOIID_60); gnlProkkaPDCPOIID_61 (original name was: gnl|Prokka|PDCPOIID_61); gnlProkkaPDCPOIID_64 (original name was: gnl|Prokka|PDCPOIID_64); gnlProkkaPDCPOIID_65 (original name was: gnl|Prokka|PDCPOIID_65); gnlProkkaPDCPOIID_66 (original name was: gnl|Prokka|PDCPOIID_66); gnlProkkaPDCPOIID_69 (original name was: gnl|Prokka|PDCPOIID_69); gnlProkkaPDCPOIID_70 (original name was: gnl|Prokka|PDCPOIID_70); gnlProkkaPDCPOIID_71 (original name was: gnl|Prokka|PDCPOIID_71); gnlProkkaPDCPOIID_72 (original name was: gnl|Prokka|PDCPOIID_72); gnlProkkaPDCPOIID_73 (original name was: gnl|Prokka|PDCPOIID_73); gnlProkkaPDCPOIID_74 (original name was: gnl|Prokka|PDCPOIID_74); gnlProkkaPDCPOIID_75 (original name was: gnl|Prokka|PDCPOIID_75); gnlProkkaPDCPOIID_78 (original name was: gnl|Prokka|PDCPOIID_78); gnlProkkaPDCPOIID_79 (original name was: gnl|Prokka|PDCPOIID_79); gnlProkkaPDCPOIID_80 (original name was: gnl|Prokka|PDCPOIID_80); gnlProkkaPDCPOIID_83 (original name was: gnl|Prokka|PDCPOIID_83); gnlProkkaPDCPOIID_86 (original name was: gnl|Prokka|PDCPOIID_86); gnlProkkaPDCPOIID_87 (original name was: gnl|Prokka|PDCPOIID_87); gnlProkkaPDCPOIID_89 (original name was: gnl|Prokka|PDCPOIID_89); gnlProkkaPDCPOIID_92 (original name was: gnl|Prokka|PDCPOIID_92); gnlProkkaPDCPOIID_93 (original name was: gnl|Prokka|PDCPOIID_93); gnlProkkaPDCPOIID_94 (original name was: gnl|Prokka|PDCPOIID_94); gnlProkkaPDCPOIID_95 (original name was: gnl|Prokka|PDCPOIID_95); gnlProkkaPDCPOIID_98 (original name was: gnl|Prokka|PDCPOIID_98); gnlProkkaPDCPOIID_99 (original name was: gnl|Prokka|PDCPOIID_99); gnlProkkaPDCPOIID_100 (original name was: gnl|Prokka|PDCPOIID_100); gnlProkkaPDCPOIID_103 (original name was: gnl|Prokka|PDCPOIID_103); gnlProkkaPDCPOIID_106 (original name was: gnl|Prokka|PDCPOIID_106); gnlProkkaPDCPOIID_110 (original name was: gnl|Prokka|PDCPOIID_110); gnlProkkaPDCPOIID_111 (original name was: gnl|Prokka|PDCPOIID_111); gnlProkkaPDCPOIID_113 (original name was: gnl|Prokka|PDCPOIID_113); gnlProkkaPDCPOIID_117 (original name was: gnl|Prokka|PDCPOIID_117); gnlProkkaPDCPOIID_120 (original name was: gnl|Prokka|PDCPOIID_120); gnlProkkaPDCPOIID_121 (original name was: gnl|Prokka|PDCPOIID_121); gnlProkkaPDCPOIID_122 (original name was: gnl|Prokka|PDCPOIID_122); gnlProkkaPDCPOIID_123 (original name was: gnl|Prokka|PDCPOIID_123); gnlProkkaPDCPOIID_126 (original name was: gnl|Prokka|PDCPOIID_126); gnlProkkaPDCPOIID_127 (original name was: gnl|Prokka|PDCPOIID_127); gnlProkkaPDCPOIID_130 (original name was: gnl|Prokka|PDCPOIID_130); gnlProkkaPDCPOIID_131 (original name was: gnl|Prokka|PDCPOIID_131); gnlProkkaPDCPOIID_132 (original name was: gnl|Prokka|PDCPOIID_132); gnlProkkaPDCPOIID_133 (original name was: gnl|Prokka|PDCPOIID_133); gnlProkkaPDCPOIID_135 (original name was: gnl|Prokka|PDCPOIID_135); gnlProkkaPDCPOIID_136 (original name was: gnl|Prokka|PDCPOIID_136); gnlProkkaPDCPOIID_137 (original name was: gnl|Prokka|PDCPOIID_137); gnlProkkaPDCPOIID_138 (original name was: gnl|Prokka|PDCPOIID_138); gnlProkkaPDCPOIID_139 (original name was: gnl|Prokka|PDCPOIID_139); gnlProkkaPDCPOIID_140 (original name was: gnl|Prokka|PDCPOIID_140); gnlProkkaPDCPOIID_141 (original name was: gnl|Prokka|PDCPOIID_141); gnlProkkaPDCPOIID_142 (original name was: gnl|Prokka|PDCPOIID_142); gnlProkkaPDCPOIID_143 (original name was: gnl|Prokka|PDCPOIID_143); gnlProkkaPDCPOIID_144 (original name was: gnl|Prokka|PDCPOIID_144); gnlProkkaPDCPOIID_145 (original name was: gnl|Prokka|PDCPOIID_145); gnlProkkaPDCPOIID_146 (original name was: gnl|Prokka|PDCPOIID_146); gnlProkkaPDCPOIID_147 (original name was: gnl|Prokka|PDCPOIID_147); gnlProkkaPDCPOIID_148 (original name was: gnl|Prokka|PDCPOIID_148); gnlProkkaPDCPOIID_149 (original name was: gnl|Prokka|PDCPOIID_149); gnlProkkaPDCPOIID_150 (original name was: gnl|Prokka|PDCPOIID_150); gnlProkkaPDCPOIID_151 (original name was: gnl|Prokka|PDCPOIID_151); gnlProkkaPDCPOIID_153 (original name was: gnl|Prokka|PDCPOIID_153); gnlProkkaPDCPOIID_155 (original name was: gnl|Prokka|PDCPOIID_155); gnlProkkaPDCPOIID_156 (original name was: gnl|Prokka|PDCPOIID_156); gnlProkkaPDCPOIID_157 (original name was: gnl|Prokka|PDCPOIID_157); gnlProkkaPDCPOIID_158 (original name was: gnl|Prokka|PDCPOIID_158); gnlProkkaPDCPOIID_159 (original name was: gnl|Prokka|PDCPOIID_159); gnlProkkaPDCPOIID_162 (original name was: gnl|Prokka|PDCPOIID_162); gnlProkkaPDCPOIID_163 (original name was: gnl|Prokka|PDCPOIID_163); gnlProkkaPDCPOIID_164 (original name was: gnl|Prokka|PDCPOIID_164); gnlProkkaPDCPOIID_165 (original name was: gnl|Prokka|PDCPOIID_165); gnlProkkaPDCPOIID_166 (original name was: gnl|Prokka|PDCPOIID_166); gnlProkkaPDCPOIID_168 (original name was: gnl|Prokka|PDCPOIID_168); gnlProkkaPDCPOIID_169 (original name was: gnl|Prokka|PDCPOIID_169); gnlProkkaPDCPOIID_170 (original name was: gnl|Prokka|PDCPOIID_170); gnlProkkaPDCPOIID_171 (original name was: gnl|Prokka|PDCPOIID_171); gnlProkkaPDCPOIID_172 (original name was: gnl|Prokka|PDCPOIID_172); gnlProkkaPDCPOIID_173 (original name was: gnl|Prokka|PDCPOIID_173); gnlProkkaPDCPOIID_174 (original name was: gnl|Prokka|PDCPOIID_174); gnlProkkaPDCPOIID_175 (original name was: gnl|Prokka|PDCPOIID_175); gnlProkkaPDCPOIID_176 (original name was: gnl|Prokka|PDCPOIID_176); gnlProkkaPDCPOIID_177 (original name was: gnl|Prokka|PDCPOIID_177); gnlProkkaPDCPOIID_178 (original name was: gnl|Prokka|PDCPOIID_178); gnlProkkaPDCPOIID_179 (original name was: gnl|Prokka|PDCPOIID_179); gnlProkkaPDCPOIID_180 (original name was: gnl|Prokka|PDCPOIID_180); gnlProkkaPDCPOIID_182 (original name was: gnl|Prokka|PDCPOIID_182); gnlProkkaPDCPOIID_183 (original name was: gnl|Prokka|PDCPOIID_183); gnlProkkaPDCPOIID_184 (original name was: gnl|Prokka|PDCPOIID_184); gnlProkkaPDCPOIID_185 (original name was: gnl|Prokka|PDCPOIID_185); gnlProkkaPDCPOIID_186 (original name was: gnl|Prokka|PDCPOIID_186); gnlProkkaPDCPOIID_187 (original name was: gnl|Prokka|PDCPOIID_187); gnlProkkaPDCPOIID_188 (original name was: gnl|Prokka|PDCPOIID_188); gnlProkkaPDCPOIID_189 (original name was: gnl|Prokka|PDCPOIID_189)

Compact view

gnlProkkaPDCPOIID_161 - Region 1 - RiPP-like

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Location: 1 - 6,516 nt. (total: 6,516 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPDCPOIID_167 - Region 1 - RiPP-like

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Download region SVG

Location: 447 - 10,680 nt. (total: 10,234 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.