GCA_026127635.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJPFLBCKH_3 (original name was: gnl|Prokka|JPFLBCKH_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	64,760	76,352

gnlProkkaJPFLBCKH_11 (original name was: gnl|Prokka|JPFLBCKH_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	567,768	608,937

gnlProkkaJPFLBCKH_66 (original name was: gnl|Prokka|JPFLBCKH_66)

Region	Type	From	To	Most similar known cluster		Similarity
Region 66.1	terpene	24,790	45,671

gnlProkkaJPFLBCKH_79 (original name was: gnl|Prokka|JPFLBCKH_79)

Region	Type	From	To	Most similar known cluster		Similarity
Region 69.1	cyclic-lactone-autoinducer	122,531	136,513

Region	Type	From	To	Similarity
Region 3.1	RiPP-like	64,760	76,352
Region 11.1	T3PKS	567,768	608,937
Region 66.1	terpene	24,790	45,671
Region 69.1	cyclic-lactone-autoinducer	122,531	136,513

No secondary metabolite regions were found in these records:: gnlProkkaJPFLBCKH_1 (original name was: gnl|Prokka|JPFLBCKH_1); gnlProkkaJPFLBCKH_2 (original name was: gnl|Prokka|JPFLBCKH_2); gnlProkkaJPFLBCKH_4 (original name was: gnl|Prokka|JPFLBCKH_4); gnlProkkaJPFLBCKH_5 (original name was: gnl|Prokka|JPFLBCKH_5); gnlProkkaJPFLBCKH_6 (original name was: gnl|Prokka|JPFLBCKH_6); gnlProkkaJPFLBCKH_7 (original name was: gnl|Prokka|JPFLBCKH_7); gnlProkkaJPFLBCKH_8 (original name was: gnl|Prokka|JPFLBCKH_8); gnlProkkaJPFLBCKH_9 (original name was: gnl|Prokka|JPFLBCKH_9); gnlProkkaJPFLBCKH_10 (original name was: gnl|Prokka|JPFLBCKH_10); gnlProkkaJPFLBCKH_12 (original name was: gnl|Prokka|JPFLBCKH_12); gnlProkkaJPFLBCKH_13 (original name was: gnl|Prokka|JPFLBCKH_13); gnlProkkaJPFLBCKH_14 (original name was: gnl|Prokka|JPFLBCKH_14); gnlProkkaJPFLBCKH_15 (original name was: gnl|Prokka|JPFLBCKH_15); gnlProkkaJPFLBCKH_16 (original name was: gnl|Prokka|JPFLBCKH_16); gnlProkkaJPFLBCKH_17 (original name was: gnl|Prokka|JPFLBCKH_17); gnlProkkaJPFLBCKH_18 (original name was: gnl|Prokka|JPFLBCKH_18); gnlProkkaJPFLBCKH_19 (original name was: gnl|Prokka|JPFLBCKH_19); gnlProkkaJPFLBCKH_20 (original name was: gnl|Prokka|JPFLBCKH_20); gnlProkkaJPFLBCKH_21 (original name was: gnl|Prokka|JPFLBCKH_21); gnlProkkaJPFLBCKH_22 (original name was: gnl|Prokka|JPFLBCKH_22); gnlProkkaJPFLBCKH_23 (original name was: gnl|Prokka|JPFLBCKH_23); gnlProkkaJPFLBCKH_24 (original name was: gnl|Prokka|JPFLBCKH_24); gnlProkkaJPFLBCKH_25 (original name was: gnl|Prokka|JPFLBCKH_25); gnlProkkaJPFLBCKH_26 (original name was: gnl|Prokka|JPFLBCKH_26); gnlProkkaJPFLBCKH_27 (original name was: gnl|Prokka|JPFLBCKH_27); gnlProkkaJPFLBCKH_28 (original name was: gnl|Prokka|JPFLBCKH_28); gnlProkkaJPFLBCKH_29 (original name was: gnl|Prokka|JPFLBCKH_29); gnlProkkaJPFLBCKH_30 (original name was: gnl|Prokka|JPFLBCKH_30); gnlProkkaJPFLBCKH_31 (original name was: gnl|Prokka|JPFLBCKH_31); gnlProkkaJPFLBCKH_32 (original name was: gnl|Prokka|JPFLBCKH_32); gnlProkkaJPFLBCKH_33 (original name was: gnl|Prokka|JPFLBCKH_33); gnlProkkaJPFLBCKH_34 (original name was: gnl|Prokka|JPFLBCKH_34); gnlProkkaJPFLBCKH_35 (original name was: gnl|Prokka|JPFLBCKH_35); gnlProkkaJPFLBCKH_36 (original name was: gnl|Prokka|JPFLBCKH_36); gnlProkkaJPFLBCKH_37 (original name was: gnl|Prokka|JPFLBCKH_37); gnlProkkaJPFLBCKH_38 (original name was: gnl|Prokka|JPFLBCKH_38); gnlProkkaJPFLBCKH_39 (original name was: gnl|Prokka|JPFLBCKH_39); gnlProkkaJPFLBCKH_40 (original name was: gnl|Prokka|JPFLBCKH_40); gnlProkkaJPFLBCKH_41 (original name was: gnl|Prokka|JPFLBCKH_41); gnlProkkaJPFLBCKH_42 (original name was: gnl|Prokka|JPFLBCKH_42); gnlProkkaJPFLBCKH_43 (original name was: gnl|Prokka|JPFLBCKH_43); gnlProkkaJPFLBCKH_44 (original name was: gnl|Prokka|JPFLBCKH_44); gnlProkkaJPFLBCKH_45 (original name was: gnl|Prokka|JPFLBCKH_45); gnlProkkaJPFLBCKH_46 (original name was: gnl|Prokka|JPFLBCKH_46); gnlProkkaJPFLBCKH_47 (original name was: gnl|Prokka|JPFLBCKH_47); gnlProkkaJPFLBCKH_48 (original name was: gnl|Prokka|JPFLBCKH_48); gnlProkkaJPFLBCKH_49 (original name was: gnl|Prokka|JPFLBCKH_49); gnlProkkaJPFLBCKH_50 (original name was: gnl|Prokka|JPFLBCKH_50); gnlProkkaJPFLBCKH_51 (original name was: gnl|Prokka|JPFLBCKH_51); gnlProkkaJPFLBCKH_52 (original name was: gnl|Prokka|JPFLBCKH_52); gnlProkkaJPFLBCKH_53 (original name was: gnl|Prokka|JPFLBCKH_53); gnlProkkaJPFLBCKH_54 (original name was: gnl|Prokka|JPFLBCKH_54); gnlProkkaJPFLBCKH_55 (original name was: gnl|Prokka|JPFLBCKH_55); gnlProkkaJPFLBCKH_56 (original name was: gnl|Prokka|JPFLBCKH_56); gnlProkkaJPFLBCKH_57 (original name was: gnl|Prokka|JPFLBCKH_57); gnlProkkaJPFLBCKH_58 (original name was: gnl|Prokka|JPFLBCKH_58); gnlProkkaJPFLBCKH_59 (original name was: gnl|Prokka|JPFLBCKH_59); gnlProkkaJPFLBCKH_60 (original name was: gnl|Prokka|JPFLBCKH_60); gnlProkkaJPFLBCKH_61 (original name was: gnl|Prokka|JPFLBCKH_61); gnlProkkaJPFLBCKH_62 (original name was: gnl|Prokka|JPFLBCKH_62); gnlProkkaJPFLBCKH_63 (original name was: gnl|Prokka|JPFLBCKH_63); gnlProkkaJPFLBCKH_64 (original name was: gnl|Prokka|JPFLBCKH_64); gnlProkkaJPFLBCKH_65 (original name was: gnl|Prokka|JPFLBCKH_65); gnlProkkaJPFLBCKH_67 (original name was: gnl|Prokka|JPFLBCKH_67); gnlProkkaJPFLBCKH_77 (original name was: gnl|Prokka|JPFLBCKH_77); gnlProkkaJPFLBCKH_80 (original name was: gnl|Prokka|JPFLBCKH_80)

Compact view

gnlProkkaJPFLBCKH_3 - Region 1 - RiPP-like

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Location: 64,760 - 76,352 nt. (total: 11,593 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJPFLBCKH_11 - Region 1 - T3PKS

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Location: 567,768 - 608,937 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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NRPS/PKS domains

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJPFLBCKH_66 - Region 1 - terpene

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Location: 24,790 - 45,671 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJPFLBCKH_79 - Region 1 - cyclic-lactone-autoinducer

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Location: 122,531 - 136,513 nt. (total: 13,983 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.