GCA_026127845.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJKEMIHGD_3 (original name was: gnl|Prokka|JKEMIHGD_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	terpene	26,311	47,192

gnlProkkaJKEMIHGD_4 (original name was: gnl|Prokka|JKEMIHGD_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	T3PKS	92,651	127,769

gnlProkkaJKEMIHGD_30 (original name was: gnl|Prokka|JKEMIHGD_30)

Region	Type	From	To	Most similar known cluster		Similarity
Region 24.1	RiPP-like	188,905	201,055

gnlProkkaJKEMIHGD_34 (original name was: gnl|Prokka|JKEMIHGD_34)

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	cyclic-lactone-autoinducer	9,527	30,232

Region	Type	From	To	Similarity
Region 3.1	terpene	26,311	47,192
Region 4.1	T3PKS	92,651	127,769
Region 24.1	RiPP-like	188,905	201,055
Region 28.1	cyclic-lactone-autoinducer	9,527	30,232

No secondary metabolite regions were found in these records:: gnlProkkaJKEMIHGD_1 (original name was: gnl|Prokka|JKEMIHGD_1); gnlProkkaJKEMIHGD_2 (original name was: gnl|Prokka|JKEMIHGD_2); gnlProkkaJKEMIHGD_5 (original name was: gnl|Prokka|JKEMIHGD_5); gnlProkkaJKEMIHGD_6 (original name was: gnl|Prokka|JKEMIHGD_6); gnlProkkaJKEMIHGD_7 (original name was: gnl|Prokka|JKEMIHGD_7); gnlProkkaJKEMIHGD_8 (original name was: gnl|Prokka|JKEMIHGD_8); gnlProkkaJKEMIHGD_9 (original name was: gnl|Prokka|JKEMIHGD_9); gnlProkkaJKEMIHGD_10 (original name was: gnl|Prokka|JKEMIHGD_10); gnlProkkaJKEMIHGD_11 (original name was: gnl|Prokka|JKEMIHGD_11); gnlProkkaJKEMIHGD_12 (original name was: gnl|Prokka|JKEMIHGD_12); gnlProkkaJKEMIHGD_13 (original name was: gnl|Prokka|JKEMIHGD_13); gnlProkkaJKEMIHGD_14 (original name was: gnl|Prokka|JKEMIHGD_14); gnlProkkaJKEMIHGD_15 (original name was: gnl|Prokka|JKEMIHGD_15); gnlProkkaJKEMIHGD_16 (original name was: gnl|Prokka|JKEMIHGD_16); gnlProkkaJKEMIHGD_17 (original name was: gnl|Prokka|JKEMIHGD_17); gnlProkkaJKEMIHGD_18 (original name was: gnl|Prokka|JKEMIHGD_18); gnlProkkaJKEMIHGD_19 (original name was: gnl|Prokka|JKEMIHGD_19); gnlProkkaJKEMIHGD_20 (original name was: gnl|Prokka|JKEMIHGD_20); gnlProkkaJKEMIHGD_21 (original name was: gnl|Prokka|JKEMIHGD_21); gnlProkkaJKEMIHGD_22 (original name was: gnl|Prokka|JKEMIHGD_22); gnlProkkaJKEMIHGD_23 (original name was: gnl|Prokka|JKEMIHGD_23); gnlProkkaJKEMIHGD_31 (original name was: gnl|Prokka|JKEMIHGD_31); gnlProkkaJKEMIHGD_32 (original name was: gnl|Prokka|JKEMIHGD_32); gnlProkkaJKEMIHGD_33 (original name was: gnl|Prokka|JKEMIHGD_33); gnlProkkaJKEMIHGD_35 (original name was: gnl|Prokka|JKEMIHGD_35); gnlProkkaJKEMIHGD_36 (original name was: gnl|Prokka|JKEMIHGD_36)

Compact view

gnlProkkaJKEMIHGD_3 - Region 1 - terpene

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Location: 26,311 - 47,192 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJKEMIHGD_4 - Region 1 - T3PKS

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Location: 92,651 - 127,769 nt. (total: 35,119 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJKEMIHGD_30 - Region 1 - RiPP-like

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Location: 188,905 - 201,055 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJKEMIHGD_34 - Region 1 - cyclic-lactone-autoinducer

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Location: 9,527 - 30,232 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.