GCA_026781775.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMIPLJNMB_2 (original name was: gnl|Prokka|MIPLJNMB_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	37,548	49,644	quinolidomicin A	Polyketide	3%

gnlProkkaMIPLJNMB_10 (original name was: gnl|Prokka|MIPLJNMB_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	T3PKS	4,947	26,795

gnlProkkaMIPLJNMB_11 (original name was: gnl|Prokka|MIPLJNMB_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	95,196	119,235

No secondary metabolite regions were found in these records:: gnlProkkaMIPLJNMB_1 (original name was: gnl|Prokka|MIPLJNMB_1); gnlProkkaMIPLJNMB_3 (original name was: gnl|Prokka|MIPLJNMB_3); gnlProkkaMIPLJNMB_4 (original name was: gnl|Prokka|MIPLJNMB_4); gnlProkkaMIPLJNMB_5 (original name was: gnl|Prokka|MIPLJNMB_5); gnlProkkaMIPLJNMB_6 (original name was: gnl|Prokka|MIPLJNMB_6); gnlProkkaMIPLJNMB_7 (original name was: gnl|Prokka|MIPLJNMB_7); gnlProkkaMIPLJNMB_8 (original name was: gnl|Prokka|MIPLJNMB_8); gnlProkkaMIPLJNMB_9 (original name was: gnl|Prokka|MIPLJNMB_9); gnlProkkaMIPLJNMB_12 (original name was: gnl|Prokka|MIPLJNMB_12); gnlProkkaMIPLJNMB_13 (original name was: gnl|Prokka|MIPLJNMB_13); gnlProkkaMIPLJNMB_14 (original name was: gnl|Prokka|MIPLJNMB_14); gnlProkkaMIPLJNMB_15 (original name was: gnl|Prokka|MIPLJNMB_15); gnlProkkaMIPLJNMB_16 (original name was: gnl|Prokka|MIPLJNMB_16); gnlProkkaMIPLJNMB_17 (original name was: gnl|Prokka|MIPLJNMB_17); gnlProkkaMIPLJNMB_18 (original name was: gnl|Prokka|MIPLJNMB_18); gnlProkkaMIPLJNMB_19 (original name was: gnl|Prokka|MIPLJNMB_19); gnlProkkaMIPLJNMB_20 (original name was: gnl|Prokka|MIPLJNMB_20); gnlProkkaMIPLJNMB_21 (original name was: gnl|Prokka|MIPLJNMB_21); gnlProkkaMIPLJNMB_22 (original name was: gnl|Prokka|MIPLJNMB_22); gnlProkkaMIPLJNMB_23 (original name was: gnl|Prokka|MIPLJNMB_23); gnlProkkaMIPLJNMB_24 (original name was: gnl|Prokka|MIPLJNMB_24); gnlProkkaMIPLJNMB_25 (original name was: gnl|Prokka|MIPLJNMB_25); gnlProkkaMIPLJNMB_26 (original name was: gnl|Prokka|MIPLJNMB_26); gnlProkkaMIPLJNMB_27 (original name was: gnl|Prokka|MIPLJNMB_27); gnlProkkaMIPLJNMB_28 (original name was: gnl|Prokka|MIPLJNMB_28); gnlProkkaMIPLJNMB_29 (original name was: gnl|Prokka|MIPLJNMB_29); gnlProkkaMIPLJNMB_30 (original name was: gnl|Prokka|MIPLJNMB_30); gnlProkkaMIPLJNMB_31 (original name was: gnl|Prokka|MIPLJNMB_31); gnlProkkaMIPLJNMB_32 (original name was: gnl|Prokka|MIPLJNMB_32); gnlProkkaMIPLJNMB_33 (original name was: gnl|Prokka|MIPLJNMB_33); gnlProkkaMIPLJNMB_34 (original name was: gnl|Prokka|MIPLJNMB_34); gnlProkkaMIPLJNMB_35 (original name was: gnl|Prokka|MIPLJNMB_35); gnlProkkaMIPLJNMB_36 (original name was: gnl|Prokka|MIPLJNMB_36); gnlProkkaMIPLJNMB_37 (original name was: gnl|Prokka|MIPLJNMB_37); gnlProkkaMIPLJNMB_38 (original name was: gnl|Prokka|MIPLJNMB_38); gnlProkkaMIPLJNMB_39 (original name was: gnl|Prokka|MIPLJNMB_39); gnlProkkaMIPLJNMB_40 (original name was: gnl|Prokka|MIPLJNMB_40); gnlProkkaMIPLJNMB_41 (original name was: gnl|Prokka|MIPLJNMB_41); gnlProkkaMIPLJNMB_42 (original name was: gnl|Prokka|MIPLJNMB_42); gnlProkkaMIPLJNMB_43 (original name was: gnl|Prokka|MIPLJNMB_43); gnlProkkaMIPLJNMB_44 (original name was: gnl|Prokka|MIPLJNMB_44); gnlProkkaMIPLJNMB_45 (original name was: gnl|Prokka|MIPLJNMB_45); gnlProkkaMIPLJNMB_46 (original name was: gnl|Prokka|MIPLJNMB_46); gnlProkkaMIPLJNMB_47 (original name was: gnl|Prokka|MIPLJNMB_47); gnlProkkaMIPLJNMB_48 (original name was: gnl|Prokka|MIPLJNMB_48); gnlProkkaMIPLJNMB_49 (original name was: gnl|Prokka|MIPLJNMB_49); gnlProkkaMIPLJNMB_50 (original name was: gnl|Prokka|MIPLJNMB_50); gnlProkkaMIPLJNMB_51 (original name was: gnl|Prokka|MIPLJNMB_51); gnlProkkaMIPLJNMB_52 (original name was: gnl|Prokka|MIPLJNMB_52); gnlProkkaMIPLJNMB_53 (original name was: gnl|Prokka|MIPLJNMB_53); gnlProkkaMIPLJNMB_54 (original name was: gnl|Prokka|MIPLJNMB_54); gnlProkkaMIPLJNMB_55 (original name was: gnl|Prokka|MIPLJNMB_55); gnlProkkaMIPLJNMB_56 (original name was: gnl|Prokka|MIPLJNMB_56)

Compact view

gnlProkkaMIPLJNMB_2 - Region 1 - RiPP-like

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Location: 37,548 - 49,644 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaMIPLJNMB_10 - Region 1 - T3PKS

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Location: 4,947 - 26,795 nt. (total: 21,849 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMIPLJNMB_11 - Region 1 - RiPP-like

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Location: 95,196 - 119,235 nt. (total: 24,040 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.