GCA_026781795.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaCPNEBNBK_7 (original name was: gnl|Prokka|CPNEBNBK_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	T3PKS	1	22,113

gnlProkkaCPNEBNBK_22 (original name was: gnl|Prokka|CPNEBNBK_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	RiPP-like	75,252	87,348	quinolidomicin A	Polyketide	3%

gnlProkkaCPNEBNBK_32 (original name was: gnl|Prokka|CPNEBNBK_32)

Region	Type	From	To	Most similar known cluster		Similarity
Region 32.1	RiPP-like	119,510	138,876
Region 32.2	RiPP-like	212,209	222,505

Region	Type	From	To	Most similar known cluster	Similarity
Region 7.1	T3PKS	1	22,113
Region 22.1	RiPP-like	75,252	87,348	quinolidomicin A	Polyketide	3%
Region 32.1	RiPP-like	119,510	138,876
Region 32.2	RiPP-like	212,209	222,505

No secondary metabolite regions were found in these records:: gnlProkkaCPNEBNBK_1 (original name was: gnl|Prokka|CPNEBNBK_1); gnlProkkaCPNEBNBK_2 (original name was: gnl|Prokka|CPNEBNBK_2); gnlProkkaCPNEBNBK_3 (original name was: gnl|Prokka|CPNEBNBK_3); gnlProkkaCPNEBNBK_4 (original name was: gnl|Prokka|CPNEBNBK_4); gnlProkkaCPNEBNBK_5 (original name was: gnl|Prokka|CPNEBNBK_5); gnlProkkaCPNEBNBK_6 (original name was: gnl|Prokka|CPNEBNBK_6); gnlProkkaCPNEBNBK_8 (original name was: gnl|Prokka|CPNEBNBK_8); gnlProkkaCPNEBNBK_9 (original name was: gnl|Prokka|CPNEBNBK_9); gnlProkkaCPNEBNBK_10 (original name was: gnl|Prokka|CPNEBNBK_10); gnlProkkaCPNEBNBK_11 (original name was: gnl|Prokka|CPNEBNBK_11); gnlProkkaCPNEBNBK_12 (original name was: gnl|Prokka|CPNEBNBK_12); gnlProkkaCPNEBNBK_13 (original name was: gnl|Prokka|CPNEBNBK_13); gnlProkkaCPNEBNBK_14 (original name was: gnl|Prokka|CPNEBNBK_14); gnlProkkaCPNEBNBK_15 (original name was: gnl|Prokka|CPNEBNBK_15); gnlProkkaCPNEBNBK_16 (original name was: gnl|Prokka|CPNEBNBK_16); gnlProkkaCPNEBNBK_17 (original name was: gnl|Prokka|CPNEBNBK_17); gnlProkkaCPNEBNBK_18 (original name was: gnl|Prokka|CPNEBNBK_18); gnlProkkaCPNEBNBK_19 (original name was: gnl|Prokka|CPNEBNBK_19); gnlProkkaCPNEBNBK_20 (original name was: gnl|Prokka|CPNEBNBK_20); gnlProkkaCPNEBNBK_21 (original name was: gnl|Prokka|CPNEBNBK_21); gnlProkkaCPNEBNBK_23 (original name was: gnl|Prokka|CPNEBNBK_23); gnlProkkaCPNEBNBK_24 (original name was: gnl|Prokka|CPNEBNBK_24); gnlProkkaCPNEBNBK_25 (original name was: gnl|Prokka|CPNEBNBK_25); gnlProkkaCPNEBNBK_26 (original name was: gnl|Prokka|CPNEBNBK_26); gnlProkkaCPNEBNBK_27 (original name was: gnl|Prokka|CPNEBNBK_27); gnlProkkaCPNEBNBK_28 (original name was: gnl|Prokka|CPNEBNBK_28); gnlProkkaCPNEBNBK_29 (original name was: gnl|Prokka|CPNEBNBK_29); gnlProkkaCPNEBNBK_30 (original name was: gnl|Prokka|CPNEBNBK_30); gnlProkkaCPNEBNBK_31 (original name was: gnl|Prokka|CPNEBNBK_31); gnlProkkaCPNEBNBK_33 (original name was: gnl|Prokka|CPNEBNBK_33); gnlProkkaCPNEBNBK_34 (original name was: gnl|Prokka|CPNEBNBK_34)

Compact view

gnlProkkaCPNEBNBK_7 - Region 1 - T3PKS

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Location: 1 - 22,113 nt. (total: 22,113 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCPNEBNBK_22 - Region 1 - RiPP-like

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Location: 75,252 - 87,348 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaCPNEBNBK_32 - Region 1 - RiPP-like

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Location: 119,510 - 138,876 nt. (total: 19,367 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCPNEBNBK_32 - Region 2 - RiPP-like

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Location: 212,209 - 222,505 nt. (total: 10,297 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.