GCA_026966195.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaCBCHKEFP_4 (original name was: gnl|Prokka|CBCHKEFP_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	RRE-containing	154,758	175,111	polysaccharide C	Saccharide	20%

gnlProkkaCBCHKEFP_9 (original name was: gnl|Prokka|CBCHKEFP_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	NRPS-like	99,026	141,455

No secondary metabolite regions were found in these records:: gnlProkkaCBCHKEFP_1 (original name was: gnl|Prokka|CBCHKEFP_1); gnlProkkaCBCHKEFP_2 (original name was: gnl|Prokka|CBCHKEFP_2); gnlProkkaCBCHKEFP_3 (original name was: gnl|Prokka|CBCHKEFP_3); gnlProkkaCBCHKEFP_5 (original name was: gnl|Prokka|CBCHKEFP_5); gnlProkkaCBCHKEFP_6 (original name was: gnl|Prokka|CBCHKEFP_6); gnlProkkaCBCHKEFP_7 (original name was: gnl|Prokka|CBCHKEFP_7); gnlProkkaCBCHKEFP_8 (original name was: gnl|Prokka|CBCHKEFP_8); gnlProkkaCBCHKEFP_10 (original name was: gnl|Prokka|CBCHKEFP_10); gnlProkkaCBCHKEFP_11 (original name was: gnl|Prokka|CBCHKEFP_11); gnlProkkaCBCHKEFP_12 (original name was: gnl|Prokka|CBCHKEFP_12); gnlProkkaCBCHKEFP_13 (original name was: gnl|Prokka|CBCHKEFP_13); gnlProkkaCBCHKEFP_14 (original name was: gnl|Prokka|CBCHKEFP_14); gnlProkkaCBCHKEFP_15 (original name was: gnl|Prokka|CBCHKEFP_15); gnlProkkaCBCHKEFP_16 (original name was: gnl|Prokka|CBCHKEFP_16); gnlProkkaCBCHKEFP_17 (original name was: gnl|Prokka|CBCHKEFP_17); gnlProkkaCBCHKEFP_18 (original name was: gnl|Prokka|CBCHKEFP_18); gnlProkkaCBCHKEFP_19 (original name was: gnl|Prokka|CBCHKEFP_19); gnlProkkaCBCHKEFP_20 (original name was: gnl|Prokka|CBCHKEFP_20); gnlProkkaCBCHKEFP_21 (original name was: gnl|Prokka|CBCHKEFP_21); gnlProkkaCBCHKEFP_22 (original name was: gnl|Prokka|CBCHKEFP_22); gnlProkkaCBCHKEFP_23 (original name was: gnl|Prokka|CBCHKEFP_23); gnlProkkaCBCHKEFP_24 (original name was: gnl|Prokka|CBCHKEFP_24); gnlProkkaCBCHKEFP_25 (original name was: gnl|Prokka|CBCHKEFP_25); gnlProkkaCBCHKEFP_26 (original name was: gnl|Prokka|CBCHKEFP_26); gnlProkkaCBCHKEFP_27 (original name was: gnl|Prokka|CBCHKEFP_27); gnlProkkaCBCHKEFP_28 (original name was: gnl|Prokka|CBCHKEFP_28); gnlProkkaCBCHKEFP_29 (original name was: gnl|Prokka|CBCHKEFP_29); gnlProkkaCBCHKEFP_30 (original name was: gnl|Prokka|CBCHKEFP_30); gnlProkkaCBCHKEFP_31 (original name was: gnl|Prokka|CBCHKEFP_31); gnlProkkaCBCHKEFP_32 (original name was: gnl|Prokka|CBCHKEFP_32); gnlProkkaCBCHKEFP_33 (original name was: gnl|Prokka|CBCHKEFP_33); gnlProkkaCBCHKEFP_34 (original name was: gnl|Prokka|CBCHKEFP_34); gnlProkkaCBCHKEFP_35 (original name was: gnl|Prokka|CBCHKEFP_35); gnlProkkaCBCHKEFP_36 (original name was: gnl|Prokka|CBCHKEFP_36); gnlProkkaCBCHKEFP_37 (original name was: gnl|Prokka|CBCHKEFP_37); gnlProkkaCBCHKEFP_38 (original name was: gnl|Prokka|CBCHKEFP_38); gnlProkkaCBCHKEFP_39 (original name was: gnl|Prokka|CBCHKEFP_39); gnlProkkaCBCHKEFP_40 (original name was: gnl|Prokka|CBCHKEFP_40); gnlProkkaCBCHKEFP_41 (original name was: gnl|Prokka|CBCHKEFP_41); gnlProkkaCBCHKEFP_42 (original name was: gnl|Prokka|CBCHKEFP_42); gnlProkkaCBCHKEFP_43 (original name was: gnl|Prokka|CBCHKEFP_43); gnlProkkaCBCHKEFP_44 (original name was: gnl|Prokka|CBCHKEFP_44); gnlProkkaCBCHKEFP_45 (original name was: gnl|Prokka|CBCHKEFP_45); gnlProkkaCBCHKEFP_46 (original name was: gnl|Prokka|CBCHKEFP_46); gnlProkkaCBCHKEFP_47 (original name was: gnl|Prokka|CBCHKEFP_47); gnlProkkaCBCHKEFP_48 (original name was: gnl|Prokka|CBCHKEFP_48); gnlProkkaCBCHKEFP_49 (original name was: gnl|Prokka|CBCHKEFP_49); gnlProkkaCBCHKEFP_50 (original name was: gnl|Prokka|CBCHKEFP_50); gnlProkkaCBCHKEFP_51 (original name was: gnl|Prokka|CBCHKEFP_51); gnlProkkaCBCHKEFP_52 (original name was: gnl|Prokka|CBCHKEFP_52); gnlProkkaCBCHKEFP_53 (original name was: gnl|Prokka|CBCHKEFP_53); gnlProkkaCBCHKEFP_54 (original name was: gnl|Prokka|CBCHKEFP_54); gnlProkkaCBCHKEFP_55 (original name was: gnl|Prokka|CBCHKEFP_55); gnlProkkaCBCHKEFP_56 (original name was: gnl|Prokka|CBCHKEFP_56); gnlProkkaCBCHKEFP_57 (original name was: gnl|Prokka|CBCHKEFP_57); gnlProkkaCBCHKEFP_58 (original name was: gnl|Prokka|CBCHKEFP_58); gnlProkkaCBCHKEFP_59 (original name was: gnl|Prokka|CBCHKEFP_59); gnlProkkaCBCHKEFP_60 (original name was: gnl|Prokka|CBCHKEFP_60); gnlProkkaCBCHKEFP_61 (original name was: gnl|Prokka|CBCHKEFP_61); gnlProkkaCBCHKEFP_62 (original name was: gnl|Prokka|CBCHKEFP_62); gnlProkkaCBCHKEFP_63 (original name was: gnl|Prokka|CBCHKEFP_63); gnlProkkaCBCHKEFP_64 (original name was: gnl|Prokka|CBCHKEFP_64); gnlProkkaCBCHKEFP_65 (original name was: gnl|Prokka|CBCHKEFP_65); gnlProkkaCBCHKEFP_66 (original name was: gnl|Prokka|CBCHKEFP_66); gnlProkkaCBCHKEFP_67 (original name was: gnl|Prokka|CBCHKEFP_67); gnlProkkaCBCHKEFP_68 (original name was: gnl|Prokka|CBCHKEFP_68); gnlProkkaCBCHKEFP_69 (original name was: gnl|Prokka|CBCHKEFP_69); gnlProkkaCBCHKEFP_70 (original name was: gnl|Prokka|CBCHKEFP_70); gnlProkkaCBCHKEFP_71 (original name was: gnl|Prokka|CBCHKEFP_71); gnlProkkaCBCHKEFP_72 (original name was: gnl|Prokka|CBCHKEFP_72); gnlProkkaCBCHKEFP_73 (original name was: gnl|Prokka|CBCHKEFP_73); gnlProkkaCBCHKEFP_74 (original name was: gnl|Prokka|CBCHKEFP_74); gnlProkkaCBCHKEFP_75 (original name was: gnl|Prokka|CBCHKEFP_75)

Compact view

gnlProkkaCBCHKEFP_4 - Region 1 - RRE-containing

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Location: 154,758 - 175,111 nt. (total: 20,354 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaCBCHKEFP_9 - Region 1 - NRPS-like

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Location: 99,026 - 141,455 nt. (total: 42,430 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 99025 - 141455:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

ctg9_101

AMP-binding (12..401): X

nrpys: Leu, Ile

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DALFLGVVLK
Nearest Stachelhaus code(s):: Leu or Ile DAIYLGVVLK (59% 8Å match); aIle DALVFGVVLK (56% 8Å match)
Stachelhaus code match:: 80% (moderate)