GCA_026966995.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaGNEBNIEC_21 (original name was: gnl|Prokka|GNEBNIEC_21)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	lanthipeptide-class-iv	1	12,045

gnlProkkaGNEBNIEC_43 (original name was: gnl|Prokka|GNEBNIEC_43)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	T3PKS	35,640	76,812

gnlProkkaGNEBNIEC_81 (original name was: gnl|Prokka|GNEBNIEC_81)

Region	Type	From	To	Most similar known cluster		Similarity
Region 32.1	RiPP-like	91,191	109,003

Region	Type	From	To	Similarity
Region 11.1	lanthipeptide-class-iv	1	12,045
Region 22.1	T3PKS	35,640	76,812
Region 32.1	RiPP-like	91,191	109,003

No secondary metabolite regions were found in these records:: gnlProkkaGNEBNIEC_2 (original name was: gnl|Prokka|GNEBNIEC_2); gnlProkkaGNEBNIEC_5 (original name was: gnl|Prokka|GNEBNIEC_5); gnlProkkaGNEBNIEC_7 (original name was: gnl|Prokka|GNEBNIEC_7); gnlProkkaGNEBNIEC_8 (original name was: gnl|Prokka|GNEBNIEC_8); gnlProkkaGNEBNIEC_9 (original name was: gnl|Prokka|GNEBNIEC_9); gnlProkkaGNEBNIEC_10 (original name was: gnl|Prokka|GNEBNIEC_10); gnlProkkaGNEBNIEC_13 (original name was: gnl|Prokka|GNEBNIEC_13); gnlProkkaGNEBNIEC_17 (original name was: gnl|Prokka|GNEBNIEC_17); gnlProkkaGNEBNIEC_19 (original name was: gnl|Prokka|GNEBNIEC_19); gnlProkkaGNEBNIEC_20 (original name was: gnl|Prokka|GNEBNIEC_20); gnlProkkaGNEBNIEC_24 (original name was: gnl|Prokka|GNEBNIEC_24); gnlProkkaGNEBNIEC_25 (original name was: gnl|Prokka|GNEBNIEC_25); gnlProkkaGNEBNIEC_27 (original name was: gnl|Prokka|GNEBNIEC_27); gnlProkkaGNEBNIEC_30 (original name was: gnl|Prokka|GNEBNIEC_30); gnlProkkaGNEBNIEC_34 (original name was: gnl|Prokka|GNEBNIEC_34); gnlProkkaGNEBNIEC_35 (original name was: gnl|Prokka|GNEBNIEC_35); gnlProkkaGNEBNIEC_36 (original name was: gnl|Prokka|GNEBNIEC_36); gnlProkkaGNEBNIEC_38 (original name was: gnl|Prokka|GNEBNIEC_38); gnlProkkaGNEBNIEC_41 (original name was: gnl|Prokka|GNEBNIEC_41); gnlProkkaGNEBNIEC_42 (original name was: gnl|Prokka|GNEBNIEC_42); gnlProkkaGNEBNIEC_44 (original name was: gnl|Prokka|GNEBNIEC_44); gnlProkkaGNEBNIEC_46 (original name was: gnl|Prokka|GNEBNIEC_46); gnlProkkaGNEBNIEC_47 (original name was: gnl|Prokka|GNEBNIEC_47); gnlProkkaGNEBNIEC_48 (original name was: gnl|Prokka|GNEBNIEC_48); gnlProkkaGNEBNIEC_49 (original name was: gnl|Prokka|GNEBNIEC_49); gnlProkkaGNEBNIEC_51 (original name was: gnl|Prokka|GNEBNIEC_51); gnlProkkaGNEBNIEC_52 (original name was: gnl|Prokka|GNEBNIEC_52); gnlProkkaGNEBNIEC_54 (original name was: gnl|Prokka|GNEBNIEC_54); gnlProkkaGNEBNIEC_78 (original name was: gnl|Prokka|GNEBNIEC_78); gnlProkkaGNEBNIEC_83 (original name was: gnl|Prokka|GNEBNIEC_83); gnlProkkaGNEBNIEC_85 (original name was: gnl|Prokka|GNEBNIEC_85); gnlProkkaGNEBNIEC_86 (original name was: gnl|Prokka|GNEBNIEC_86); gnlProkkaGNEBNIEC_88 (original name was: gnl|Prokka|GNEBNIEC_88)

Compact view

gnlProkkaGNEBNIEC_21 - Region 1 - lanthipeptide-class-iv

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Location: 1 - 12,045 nt. (total: 12,045 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaGNEBNIEC_43 - Region 1 - T3PKS

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Location: 35,640 - 76,812 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGNEBNIEC_81 - Region 1 - RiPP-like

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Location: 91,191 - 109,003 nt. (total: 17,813 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.