GCA_026967015.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaOLBPFBGJ_32 (original name was: gnl|Prokka|OLBPFBGJ_32)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	lanthipeptide-class-iv	1	12,045

gnlProkkaOLBPFBGJ_45 (original name was: gnl|Prokka|OLBPFBGJ_45)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	T3PKS	382,573	423,745

gnlProkkaOLBPFBGJ_50 (original name was: gnl|Prokka|OLBPFBGJ_50)

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	RiPP-like	91,191	109,003

Region	Type	From	To	Similarity
Region 11.1	lanthipeptide-class-iv	1	12,045
Region 22.1	T3PKS	382,573	423,745
Region 25.1	RiPP-like	91,191	109,003

No secondary metabolite regions were found in these records:: gnlProkkaOLBPFBGJ_4 (original name was: gnl|Prokka|OLBPFBGJ_4); gnlProkkaOLBPFBGJ_6 (original name was: gnl|Prokka|OLBPFBGJ_6); gnlProkkaOLBPFBGJ_7 (original name was: gnl|Prokka|OLBPFBGJ_7); gnlProkkaOLBPFBGJ_8 (original name was: gnl|Prokka|OLBPFBGJ_8); gnlProkkaOLBPFBGJ_9 (original name was: gnl|Prokka|OLBPFBGJ_9); gnlProkkaOLBPFBGJ_10 (original name was: gnl|Prokka|OLBPFBGJ_10); gnlProkkaOLBPFBGJ_11 (original name was: gnl|Prokka|OLBPFBGJ_11); gnlProkkaOLBPFBGJ_14 (original name was: gnl|Prokka|OLBPFBGJ_14); gnlProkkaOLBPFBGJ_20 (original name was: gnl|Prokka|OLBPFBGJ_20); gnlProkkaOLBPFBGJ_31 (original name was: gnl|Prokka|OLBPFBGJ_31); gnlProkkaOLBPFBGJ_35 (original name was: gnl|Prokka|OLBPFBGJ_35); gnlProkkaOLBPFBGJ_36 (original name was: gnl|Prokka|OLBPFBGJ_36); gnlProkkaOLBPFBGJ_37 (original name was: gnl|Prokka|OLBPFBGJ_37); gnlProkkaOLBPFBGJ_38 (original name was: gnl|Prokka|OLBPFBGJ_38); gnlProkkaOLBPFBGJ_39 (original name was: gnl|Prokka|OLBPFBGJ_39); gnlProkkaOLBPFBGJ_40 (original name was: gnl|Prokka|OLBPFBGJ_40); gnlProkkaOLBPFBGJ_41 (original name was: gnl|Prokka|OLBPFBGJ_41); gnlProkkaOLBPFBGJ_42 (original name was: gnl|Prokka|OLBPFBGJ_42); gnlProkkaOLBPFBGJ_43 (original name was: gnl|Prokka|OLBPFBGJ_43); gnlProkkaOLBPFBGJ_44 (original name was: gnl|Prokka|OLBPFBGJ_44); gnlProkkaOLBPFBGJ_46 (original name was: gnl|Prokka|OLBPFBGJ_46); gnlProkkaOLBPFBGJ_47 (original name was: gnl|Prokka|OLBPFBGJ_47); gnlProkkaOLBPFBGJ_53 (original name was: gnl|Prokka|OLBPFBGJ_53); gnlProkkaOLBPFBGJ_54 (original name was: gnl|Prokka|OLBPFBGJ_54); gnlProkkaOLBPFBGJ_55 (original name was: gnl|Prokka|OLBPFBGJ_55); gnlProkkaOLBPFBGJ_57 (original name was: gnl|Prokka|OLBPFBGJ_57); gnlProkkaOLBPFBGJ_60 (original name was: gnl|Prokka|OLBPFBGJ_60); gnlProkkaOLBPFBGJ_61 (original name was: gnl|Prokka|OLBPFBGJ_61)

Compact view

gnlProkkaOLBPFBGJ_32 - Region 1 - lanthipeptide-class-iv

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Location: 1 - 12,045 nt. (total: 12,045 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaOLBPFBGJ_45 - Region 1 - T3PKS

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Location: 382,573 - 423,745 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOLBPFBGJ_50 - Region 1 - RiPP-like

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Location: 91,191 - 109,003 nt. (total: 17,813 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.