GCA_026967125.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaEAEOGHBL_3 (original name was: gnl|Prokka|EAEOGHBL_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	1,340	11,525

gnlProkkaEAEOGHBL_8 (original name was: gnl|Prokka|EAEOGHBL_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	RiPP-like	1	6,702

gnlProkkaEAEOGHBL_33 (original name was: gnl|Prokka|EAEOGHBL_33)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	T3PKS	272,811	313,983

Region	Type	From	To	Similarity
Region 2.1	RiPP-like	1,340	11,525
Region 5.1	RiPP-like	1	6,702
Region 22.1	T3PKS	272,811	313,983

No secondary metabolite regions were found in these records:: gnlProkkaEAEOGHBL_2 (original name was: gnl|Prokka|EAEOGHBL_2); gnlProkkaEAEOGHBL_6 (original name was: gnl|Prokka|EAEOGHBL_6); gnlProkkaEAEOGHBL_7 (original name was: gnl|Prokka|EAEOGHBL_7); gnlProkkaEAEOGHBL_9 (original name was: gnl|Prokka|EAEOGHBL_9); gnlProkkaEAEOGHBL_10 (original name was: gnl|Prokka|EAEOGHBL_10); gnlProkkaEAEOGHBL_11 (original name was: gnl|Prokka|EAEOGHBL_11); gnlProkkaEAEOGHBL_13 (original name was: gnl|Prokka|EAEOGHBL_13); gnlProkkaEAEOGHBL_15 (original name was: gnl|Prokka|EAEOGHBL_15); gnlProkkaEAEOGHBL_16 (original name was: gnl|Prokka|EAEOGHBL_16); gnlProkkaEAEOGHBL_19 (original name was: gnl|Prokka|EAEOGHBL_19); gnlProkkaEAEOGHBL_20 (original name was: gnl|Prokka|EAEOGHBL_20); gnlProkkaEAEOGHBL_23 (original name was: gnl|Prokka|EAEOGHBL_23); gnlProkkaEAEOGHBL_24 (original name was: gnl|Prokka|EAEOGHBL_24); gnlProkkaEAEOGHBL_25 (original name was: gnl|Prokka|EAEOGHBL_25); gnlProkkaEAEOGHBL_26 (original name was: gnl|Prokka|EAEOGHBL_26); gnlProkkaEAEOGHBL_27 (original name was: gnl|Prokka|EAEOGHBL_27); gnlProkkaEAEOGHBL_28 (original name was: gnl|Prokka|EAEOGHBL_28); gnlProkkaEAEOGHBL_31 (original name was: gnl|Prokka|EAEOGHBL_31); gnlProkkaEAEOGHBL_32 (original name was: gnl|Prokka|EAEOGHBL_32); gnlProkkaEAEOGHBL_34 (original name was: gnl|Prokka|EAEOGHBL_34); gnlProkkaEAEOGHBL_44 (original name was: gnl|Prokka|EAEOGHBL_44); gnlProkkaEAEOGHBL_52 (original name was: gnl|Prokka|EAEOGHBL_52); gnlProkkaEAEOGHBL_53 (original name was: gnl|Prokka|EAEOGHBL_53); gnlProkkaEAEOGHBL_54 (original name was: gnl|Prokka|EAEOGHBL_54); gnlProkkaEAEOGHBL_55 (original name was: gnl|Prokka|EAEOGHBL_55); gnlProkkaEAEOGHBL_56 (original name was: gnl|Prokka|EAEOGHBL_56); gnlProkkaEAEOGHBL_57 (original name was: gnl|Prokka|EAEOGHBL_57); gnlProkkaEAEOGHBL_58 (original name was: gnl|Prokka|EAEOGHBL_58); gnlProkkaEAEOGHBL_63 (original name was: gnl|Prokka|EAEOGHBL_63); gnlProkkaEAEOGHBL_68 (original name was: gnl|Prokka|EAEOGHBL_68); gnlProkkaEAEOGHBL_69 (original name was: gnl|Prokka|EAEOGHBL_69); gnlProkkaEAEOGHBL_72 (original name was: gnl|Prokka|EAEOGHBL_72); gnlProkkaEAEOGHBL_73 (original name was: gnl|Prokka|EAEOGHBL_73); gnlProkkaEAEOGHBL_77 (original name was: gnl|Prokka|EAEOGHBL_77)

Compact view

gnlProkkaEAEOGHBL_3 - Region 1 - RiPP-like

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Location: 1,340 - 11,525 nt. (total: 10,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEAEOGHBL_8 - Region 1 - RiPP-like

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Location: 1 - 6,702 nt. (total: 6,702 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEAEOGHBL_33 - Region 1 - T3PKS

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Location: 272,811 - 313,983 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.