GCA_026967335.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMCCONGBD_71 (original name was: gnl|Prokka|MCCONGBD_71)

Region	Type	From	To	Most similar known cluster		Similarity
Region 39.1	T3PKS	177,865	219,037

gnlProkkaMCCONGBD_75 (original name was: gnl|Prokka|MCCONGBD_75)

Region	Type	From	To	Most similar known cluster		Similarity
Region 41.1	RiPP-like	91,191	109,003

gnlProkkaMCCONGBD_82 (original name was: gnl|Prokka|MCCONGBD_82)

Region	Type	From	To	Most similar known cluster		Similarity
Region 44.1	lanthipeptide-class-iv	1	12,022

Region	Type	From	To	Similarity
Region 39.1	T3PKS	177,865	219,037
Region 41.1	RiPP-like	91,191	109,003
Region 44.1	lanthipeptide-class-iv	1	12,022

No secondary metabolite regions were found in these records:: gnlProkkaMCCONGBD_2 (original name was: gnl|Prokka|MCCONGBD_2); gnlProkkaMCCONGBD_4 (original name was: gnl|Prokka|MCCONGBD_4); gnlProkkaMCCONGBD_8 (original name was: gnl|Prokka|MCCONGBD_8); gnlProkkaMCCONGBD_9 (original name was: gnl|Prokka|MCCONGBD_9); gnlProkkaMCCONGBD_10 (original name was: gnl|Prokka|MCCONGBD_10); gnlProkkaMCCONGBD_13 (original name was: gnl|Prokka|MCCONGBD_13); gnlProkkaMCCONGBD_14 (original name was: gnl|Prokka|MCCONGBD_14); gnlProkkaMCCONGBD_15 (original name was: gnl|Prokka|MCCONGBD_15); gnlProkkaMCCONGBD_17 (original name was: gnl|Prokka|MCCONGBD_17); gnlProkkaMCCONGBD_19 (original name was: gnl|Prokka|MCCONGBD_19); gnlProkkaMCCONGBD_20 (original name was: gnl|Prokka|MCCONGBD_20); gnlProkkaMCCONGBD_28 (original name was: gnl|Prokka|MCCONGBD_28); gnlProkkaMCCONGBD_39 (original name was: gnl|Prokka|MCCONGBD_39); gnlProkkaMCCONGBD_46 (original name was: gnl|Prokka|MCCONGBD_46); gnlProkkaMCCONGBD_47 (original name was: gnl|Prokka|MCCONGBD_47); gnlProkkaMCCONGBD_48 (original name was: gnl|Prokka|MCCONGBD_48); gnlProkkaMCCONGBD_49 (original name was: gnl|Prokka|MCCONGBD_49); gnlProkkaMCCONGBD_50 (original name was: gnl|Prokka|MCCONGBD_50); gnlProkkaMCCONGBD_51 (original name was: gnl|Prokka|MCCONGBD_51); gnlProkkaMCCONGBD_52 (original name was: gnl|Prokka|MCCONGBD_52); gnlProkkaMCCONGBD_53 (original name was: gnl|Prokka|MCCONGBD_53); gnlProkkaMCCONGBD_54 (original name was: gnl|Prokka|MCCONGBD_54); gnlProkkaMCCONGBD_55 (original name was: gnl|Prokka|MCCONGBD_55); gnlProkkaMCCONGBD_56 (original name was: gnl|Prokka|MCCONGBD_56); gnlProkkaMCCONGBD_57 (original name was: gnl|Prokka|MCCONGBD_57); gnlProkkaMCCONGBD_58 (original name was: gnl|Prokka|MCCONGBD_58); gnlProkkaMCCONGBD_59 (original name was: gnl|Prokka|MCCONGBD_59); gnlProkkaMCCONGBD_60 (original name was: gnl|Prokka|MCCONGBD_60); gnlProkkaMCCONGBD_61 (original name was: gnl|Prokka|MCCONGBD_61); gnlProkkaMCCONGBD_62 (original name was: gnl|Prokka|MCCONGBD_62); gnlProkkaMCCONGBD_63 (original name was: gnl|Prokka|MCCONGBD_63); gnlProkkaMCCONGBD_64 (original name was: gnl|Prokka|MCCONGBD_64); gnlProkkaMCCONGBD_65 (original name was: gnl|Prokka|MCCONGBD_65); gnlProkkaMCCONGBD_66 (original name was: gnl|Prokka|MCCONGBD_66); gnlProkkaMCCONGBD_67 (original name was: gnl|Prokka|MCCONGBD_67); gnlProkkaMCCONGBD_68 (original name was: gnl|Prokka|MCCONGBD_68); gnlProkkaMCCONGBD_69 (original name was: gnl|Prokka|MCCONGBD_69); gnlProkkaMCCONGBD_70 (original name was: gnl|Prokka|MCCONGBD_70); gnlProkkaMCCONGBD_73 (original name was: gnl|Prokka|MCCONGBD_73); gnlProkkaMCCONGBD_77 (original name was: gnl|Prokka|MCCONGBD_77); gnlProkkaMCCONGBD_79 (original name was: gnl|Prokka|MCCONGBD_79)

Compact view

gnlProkkaMCCONGBD_71 - Region 1 - T3PKS

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Location: 177,865 - 219,037 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMCCONGBD_75 - Region 1 - RiPP-like

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Location: 91,191 - 109,003 nt. (total: 17,813 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMCCONGBD_82 - Region 1 - lanthipeptide-class-iv

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Location: 1 - 12,022 nt. (total: 12,022 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.