GCA_026967355.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaHNDJENEA_62 (original name was: gnl|Prokka|HNDJENEA_62)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	T3PKS	177,865	219,037

gnlProkkaHNDJENEA_65 (original name was: gnl|Prokka|HNDJENEA_65)

Region	Type	From	To	Most similar known cluster		Similarity
Region 35.1	RiPP-like	91,191	109,003

gnlProkkaHNDJENEA_75 (original name was: gnl|Prokka|HNDJENEA_75)

Region	Type	From	To	Most similar known cluster		Similarity
Region 40.1	lanthipeptide-class-iv	1	12,022

Region	Type	From	To	Similarity
Region 33.1	T3PKS	177,865	219,037
Region 35.1	RiPP-like	91,191	109,003
Region 40.1	lanthipeptide-class-iv	1	12,022

No secondary metabolite regions were found in these records:: gnlProkkaHNDJENEA_2 (original name was: gnl|Prokka|HNDJENEA_2); gnlProkkaHNDJENEA_4 (original name was: gnl|Prokka|HNDJENEA_4); gnlProkkaHNDJENEA_7 (original name was: gnl|Prokka|HNDJENEA_7); gnlProkkaHNDJENEA_9 (original name was: gnl|Prokka|HNDJENEA_9); gnlProkkaHNDJENEA_12 (original name was: gnl|Prokka|HNDJENEA_12); gnlProkkaHNDJENEA_13 (original name was: gnl|Prokka|HNDJENEA_13); gnlProkkaHNDJENEA_14 (original name was: gnl|Prokka|HNDJENEA_14); gnlProkkaHNDJENEA_15 (original name was: gnl|Prokka|HNDJENEA_15); gnlProkkaHNDJENEA_17 (original name was: gnl|Prokka|HNDJENEA_17); gnlProkkaHNDJENEA_18 (original name was: gnl|Prokka|HNDJENEA_18); gnlProkkaHNDJENEA_19 (original name was: gnl|Prokka|HNDJENEA_19); gnlProkkaHNDJENEA_20 (original name was: gnl|Prokka|HNDJENEA_20); gnlProkkaHNDJENEA_21 (original name was: gnl|Prokka|HNDJENEA_21); gnlProkkaHNDJENEA_22 (original name was: gnl|Prokka|HNDJENEA_22); gnlProkkaHNDJENEA_23 (original name was: gnl|Prokka|HNDJENEA_23); gnlProkkaHNDJENEA_26 (original name was: gnl|Prokka|HNDJENEA_26); gnlProkkaHNDJENEA_37 (original name was: gnl|Prokka|HNDJENEA_37); gnlProkkaHNDJENEA_47 (original name was: gnl|Prokka|HNDJENEA_47); gnlProkkaHNDJENEA_48 (original name was: gnl|Prokka|HNDJENEA_48); gnlProkkaHNDJENEA_49 (original name was: gnl|Prokka|HNDJENEA_49); gnlProkkaHNDJENEA_50 (original name was: gnl|Prokka|HNDJENEA_50); gnlProkkaHNDJENEA_51 (original name was: gnl|Prokka|HNDJENEA_51); gnlProkkaHNDJENEA_52 (original name was: gnl|Prokka|HNDJENEA_52); gnlProkkaHNDJENEA_53 (original name was: gnl|Prokka|HNDJENEA_53); gnlProkkaHNDJENEA_54 (original name was: gnl|Prokka|HNDJENEA_54); gnlProkkaHNDJENEA_55 (original name was: gnl|Prokka|HNDJENEA_55); gnlProkkaHNDJENEA_56 (original name was: gnl|Prokka|HNDJENEA_56); gnlProkkaHNDJENEA_57 (original name was: gnl|Prokka|HNDJENEA_57); gnlProkkaHNDJENEA_58 (original name was: gnl|Prokka|HNDJENEA_58); gnlProkkaHNDJENEA_59 (original name was: gnl|Prokka|HNDJENEA_59); gnlProkkaHNDJENEA_60 (original name was: gnl|Prokka|HNDJENEA_60); gnlProkkaHNDJENEA_61 (original name was: gnl|Prokka|HNDJENEA_61); gnlProkkaHNDJENEA_63 (original name was: gnl|Prokka|HNDJENEA_63); gnlProkkaHNDJENEA_66 (original name was: gnl|Prokka|HNDJENEA_66); gnlProkkaHNDJENEA_69 (original name was: gnl|Prokka|HNDJENEA_69); gnlProkkaHNDJENEA_71 (original name was: gnl|Prokka|HNDJENEA_71); gnlProkkaHNDJENEA_74 (original name was: gnl|Prokka|HNDJENEA_74)

Compact view

gnlProkkaHNDJENEA_62 - Region 1 - T3PKS

Download region GenBank file

Download region SVG

Location: 177,865 - 219,037 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHNDJENEA_65 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 91,191 - 109,003 nt. (total: 17,813 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHNDJENEA_75 - Region 1 - lanthipeptide-class-iv

Download region GenBank file

Download region SVG

Location: 1 - 12,022 nt. (total: 12,022 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.