GCA_026967395.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNFHBLCED_17 (original name was: gnl|Prokka|NFHBLCED_17)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	lanthipeptide-class-iv	1	12,045

gnlProkkaNFHBLCED_44 (original name was: gnl|Prokka|NFHBLCED_44)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	T3PKS	35,363	76,535

gnlProkkaNFHBLCED_48 (original name was: gnl|Prokka|NFHBLCED_48)

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	RiPP-like	334,085	351,897

Region	Type	From	To	Similarity
Region 11.1	lanthipeptide-class-iv	1	12,045
Region 22.1	T3PKS	35,363	76,535
Region 25.1	RiPP-like	334,085	351,897

No secondary metabolite regions were found in these records:: gnlProkkaNFHBLCED_3 (original name was: gnl|Prokka|NFHBLCED_3); gnlProkkaNFHBLCED_5 (original name was: gnl|Prokka|NFHBLCED_5); gnlProkkaNFHBLCED_6 (original name was: gnl|Prokka|NFHBLCED_6); gnlProkkaNFHBLCED_8 (original name was: gnl|Prokka|NFHBLCED_8); gnlProkkaNFHBLCED_9 (original name was: gnl|Prokka|NFHBLCED_9); gnlProkkaNFHBLCED_11 (original name was: gnl|Prokka|NFHBLCED_11); gnlProkkaNFHBLCED_13 (original name was: gnl|Prokka|NFHBLCED_13); gnlProkkaNFHBLCED_14 (original name was: gnl|Prokka|NFHBLCED_14); gnlProkkaNFHBLCED_15 (original name was: gnl|Prokka|NFHBLCED_15); gnlProkkaNFHBLCED_16 (original name was: gnl|Prokka|NFHBLCED_16); gnlProkkaNFHBLCED_22 (original name was: gnl|Prokka|NFHBLCED_22); gnlProkkaNFHBLCED_33 (original name was: gnl|Prokka|NFHBLCED_33); gnlProkkaNFHBLCED_36 (original name was: gnl|Prokka|NFHBLCED_36); gnlProkkaNFHBLCED_37 (original name was: gnl|Prokka|NFHBLCED_37); gnlProkkaNFHBLCED_38 (original name was: gnl|Prokka|NFHBLCED_38); gnlProkkaNFHBLCED_39 (original name was: gnl|Prokka|NFHBLCED_39); gnlProkkaNFHBLCED_40 (original name was: gnl|Prokka|NFHBLCED_40); gnlProkkaNFHBLCED_41 (original name was: gnl|Prokka|NFHBLCED_41); gnlProkkaNFHBLCED_42 (original name was: gnl|Prokka|NFHBLCED_42); gnlProkkaNFHBLCED_43 (original name was: gnl|Prokka|NFHBLCED_43); gnlProkkaNFHBLCED_45 (original name was: gnl|Prokka|NFHBLCED_45); gnlProkkaNFHBLCED_46 (original name was: gnl|Prokka|NFHBLCED_46); gnlProkkaNFHBLCED_52 (original name was: gnl|Prokka|NFHBLCED_52); gnlProkkaNFHBLCED_54 (original name was: gnl|Prokka|NFHBLCED_54); gnlProkkaNFHBLCED_56 (original name was: gnl|Prokka|NFHBLCED_56); gnlProkkaNFHBLCED_59 (original name was: gnl|Prokka|NFHBLCED_59); gnlProkkaNFHBLCED_61 (original name was: gnl|Prokka|NFHBLCED_61); gnlProkkaNFHBLCED_63 (original name was: gnl|Prokka|NFHBLCED_63)

Compact view

gnlProkkaNFHBLCED_17 - Region 1 - lanthipeptide-class-iv

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Location: 1 - 12,045 nt. (total: 12,045 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaNFHBLCED_44 - Region 1 - T3PKS

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Location: 35,363 - 76,535 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNFHBLCED_48 - Region 1 - RiPP-like

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Location: 334,085 - 351,897 nt. (total: 17,813 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.