GCA_027214545.1 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaGDDEPIKL_19 (original name was: gnl|Prokka|GDDEPIKL_19)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	hglE-KS	50,832	93,360

Region	Type	From	To	Most similar known cluster	Similarity
Region 15.1	hglE-KS	50,832	93,360

No secondary metabolite regions were found in these records:: gnlProkkaGDDEPIKL_1 (original name was: gnl|Prokka|GDDEPIKL_1); gnlProkkaGDDEPIKL_2 (original name was: gnl|Prokka|GDDEPIKL_2); gnlProkkaGDDEPIKL_3 (original name was: gnl|Prokka|GDDEPIKL_3); gnlProkkaGDDEPIKL_4 (original name was: gnl|Prokka|GDDEPIKL_4); gnlProkkaGDDEPIKL_5 (original name was: gnl|Prokka|GDDEPIKL_5); gnlProkkaGDDEPIKL_6 (original name was: gnl|Prokka|GDDEPIKL_6); gnlProkkaGDDEPIKL_7 (original name was: gnl|Prokka|GDDEPIKL_7); gnlProkkaGDDEPIKL_8 (original name was: gnl|Prokka|GDDEPIKL_8); gnlProkkaGDDEPIKL_9 (original name was: gnl|Prokka|GDDEPIKL_9); gnlProkkaGDDEPIKL_10 (original name was: gnl|Prokka|GDDEPIKL_10); gnlProkkaGDDEPIKL_11 (original name was: gnl|Prokka|GDDEPIKL_11); gnlProkkaGDDEPIKL_12 (original name was: gnl|Prokka|GDDEPIKL_12); gnlProkkaGDDEPIKL_13 (original name was: gnl|Prokka|GDDEPIKL_13); gnlProkkaGDDEPIKL_14 (original name was: gnl|Prokka|GDDEPIKL_14); gnlProkkaGDDEPIKL_26 (original name was: gnl|Prokka|GDDEPIKL_26); gnlProkkaGDDEPIKL_27 (original name was: gnl|Prokka|GDDEPIKL_27); gnlProkkaGDDEPIKL_28 (original name was: gnl|Prokka|GDDEPIKL_28); gnlProkkaGDDEPIKL_29 (original name was: gnl|Prokka|GDDEPIKL_29); gnlProkkaGDDEPIKL_30 (original name was: gnl|Prokka|GDDEPIKL_30); gnlProkkaGDDEPIKL_31 (original name was: gnl|Prokka|GDDEPIKL_31); gnlProkkaGDDEPIKL_32 (original name was: gnl|Prokka|GDDEPIKL_32)

Compact view

gnlProkkaGDDEPIKL_19 - Region 1 - hglE-KS

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Location: 50,832 - 93,360 nt. (total: 42,529 nt) Show pHMM detection rules used

hglE-KS: (hglE or hglD)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

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NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 50831 - 93360:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

ctg15_55

PKS_AT (38..333): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 53.5
Methoxymalonyl-CoA: 42.7
Methylmalonyl-CoA: 21.4
inactive: 13.9
2-Methylbutyryl-CoA: 13.9
Propionyl-CoA: 11.0
Isobutyryl-CoA: 10.1
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0