Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_027214825.1	Bifidobacterium breve	SDS-835-OWp	SAMN32244234	2019-04-06	Canada: Vancouver	Homo sapiens	0	2	0	0	2.00
2	GCA_027215005.1	Bifidobacterium breve	SDS-832-OWp	SAMN32244252	2019-02-20	Canada: Vancouver	Homo sapiens	3	2	0	0	2.00
3	GCA_027214675.1	Bifidobacterium breve	SDS-834-OWp	SAMN32244262	2019-02-27	Canada: Vancouver	Homo sapiens	8	2	0	0	2.00
4	GCA_027215075.1	Bifidobacterium breve	SDS-1440-OWr	SAMN32244236	2019-07-05	Canada: Vancouver	Homo sapiens	1074	3	0	0	3.00
5	GCA_027215185.1	Bifidobacterium breve	SDS-1439-RL	SAMN32244255	2019-06-21	Canada: Vancouver	Homo sapiens	1074	3	0	0	3.00
6	GCA_027215315.1	Bifidobacterium breve	SDS-1441-OWr	SAMN32244253	2019-09-20	Canada: Vancouver	Homo sapiens	1074	3	0	0	3.00
7	GCA_030216725.1	Bifidobacterium breve	UMB6681	SAMN34996552	2015-01	USA: Maywood, IL	Homo sapiens	1099	2	0	0	2.00
8	GCA_028201995.1	Bifidobacterium breve	1001287st1_G6_1001287H_170206	SAMN31321422	2017-02-06	USA	Homo sapiens	1107	4	0	0	4.00
9	GCA_027214485.1	Bifidobacterium breve	SDS-746-OW	SAMN32244264	2019-10-28	Canada: Vancouver	Homo sapiens	1113	3	0	0	3.00
10	GCA_027214565.1	Bifidobacterium breve	SDS-746-W	SAMN32244265	2019-10-28	Canada: Vancouver	Homo sapiens	1113	3	0	0	3.00
11	GCA_030414125.1	Bifidobacterium breve	Bif11	SAMN08966057	2015	India:Chandigarh	Homo sapiens	1115	3	0	0	3.00
12	GCA_014779815.1	Bifidobacterium breve	142	SAMN12139126	2013	India	Homo sapiens	1120	2	0	0	2.00
13	GCA_902167895.1	Bifidobacterium breve	-	SAMEA5771494	-	-	-	1127	2	0	0	2.00
14	GCA_003370295.1	Bifidobacterium breve	91-1	SAMN07189838	2012	Canada: Toronto	Homo sapiens	1128	0	0	0	0.00
15	GCA_027215095.1	Bifidobacterium breve	SDS-744-OW	SAMN32244245	2019-10-15	Canada: Vancouver	Homo sapiens	1133	1	0	0	1.00
16	GCA_027212595.1	Bifidobacterium breve	SDS-744-W	SAMN32244246	2019-10-15	Canada: Vancouver	Homo sapiens	1135	1	0	0	1.00
17	GCA_003370105.1	Bifidobacterium breve	N6D12	SAMN07189843	2007	Kenya: Nairobi	Homo sapiens	1138	1	0	0	1.00
18	GCA_027215265.1	Bifidobacterium breve	SDS-1702-OWr1	SAMN32244257	2019-09-24	Canada: Vancouver	Homo sapiens	1138	2	0	0	2.00
19	GCA_027215525.1	Bifidobacterium breve	SDS-1701-OWr1	SAMN32244244	2019-09-13	Canada: Vancouver	Homo sapiens	1138	2	0	0	2.00
20	GCA_027215305.1	Bifidobacterium breve	SDS-1703-OWr1	SAMN32244240	2019-12-11	Canada: Vancouver	Homo sapiens	1140	2	0	0	2.00
21	GCA_002838705.1	Bifidobacterium breve	DRBB29	SAMN07160978	2014-10-01	Netherlands	Homo sapiens	1144	1	0	0	1.00
22	GCA_002838445.1	Bifidobacterium breve	DRBB27	SAMN06827975	2014-10-01	Netherlands	Homo sapiens	1145	1	0	0	1.00
23	GCA_040151035.1	Bifidobacterium breve	LH-CAM-38	SAMN40597875	2021	Cameroon	Homo sapiens	1145	1	0	0	1.00
24	GCA_002861455.1	Bifidobacterium breve	UMB0915	SAMN08193648	2015	USA: Maywood, IL	Homo sapiens	1146	3	0	0	3.00
25	GCA_002871815.1	Bifidobacterium breve	UMB0089	SAMN07511392	2015	USA: Maywood, IL	Homo sapiens	1146	3	0	0	3.00
26	GCA_002838325.1	Bifidobacterium breve	NRBB09	SAMN06827067	2014-10-01	Netherlands	Homo sapiens	1162	1	0	0	1.00
27	GCA_030441965.1	Bifidobacterium breve	DSM 32583	SAMN34073939	-	Spain	Homo sapiens	1163	2	0	0	2.00
28	GCA_000568895.1	Bifidobacterium breve 2L	2L	SAMN02951890	-	Italy: Parma	Homo sapiens	1178	2	0	0	2.00
29	GCA_000568955.2	Bifidobacterium breve 12L	12L	SAMN03081478	-	-	-	1178	2	0	0	2.00
30	GCA_029723755.1	Bifidobacterium breve	LH_1004	SAMN24838601	2017	United Kingdom	Homo sapiens	1180	6	0	0	6.00
31	GCA_029723395.1	Bifidobacterium breve	LH_1047	SAMN24838609	2017	United Kingdom	Homo sapiens	1181	6	0	0	6.00
32	GCA_040150935.1	Bifidobacterium breve	LH-CAM-52	SAMN40597879	2021	Cameroon	Homo sapiens	1181	2	0	0	2.00
33	GCA_040150815.1	Bifidobacterium breve	LH-CAM-63	SAMN40597883	2021	Cameroon	Homo sapiens	1184	1	0	0	1.00
34	GCA_003370155.1	Bifidobacterium breve	12-4	SAMN07189840	2005	Canada	Homo sapiens	1185	1	0	0	1.00
35	GCA_002838545.1	Bifidobacterium breve	082W48	SAMN06828932	2014-10-01	Ireland	Homo sapiens	1187	1	0	0	1.00
36	GCA_028201775.1	Bifidobacterium breve	J1101312st1_E4_J1101312_190322	SAMN31321433	2019-03-22	USA	Homo sapiens	1187	1	0	0	1.00
37	GCA_028203415.1	Bifidobacterium breve	J1101312st1_H6_J1101312_190322	SAMN31321434	2019-03-22	USA	Homo sapiens	1187	1	0	0	1.00
38	GCA_000213865.1	Bifidobacterium breve ACS-071-V-Sch8b	ACS-071-V-Sch8b	SAMN00100758	-	-	Homo sapiens	1188	2	0	0	2.00
39	GCA_027212565.1	Bifidobacterium breve	SDS-962-Irr	SAMN32244238	2019-02-11	Canada: Vancouver	Homo sapiens	1189	1	0	0	1.00
40	GCA_027212815.1	Bifidobacterium breve	SDS-964-W-Irr	SAMN32244259	2019-02-26	Canada: Vancouver	Homo sapiens	1189	1	0	0	1.00
41	GCA_028203585.1	Bifidobacterium breve	2217st1_B10_2217SCRN_200827	SAMN31321423	2020-08-27	USA	Homo sapiens	1189	1	0	0	1.00
42	GCA_039912975.1	Bifidobacterium breve	2217st1_C9_2217SCRN_200827	SAMN31321424	2020-08-27	USA	Homo sapiens	1189	1	0	0	1.00
43	GCA_002838485.1	Bifidobacterium breve	215W447a	SAMN06829004	2014-10-01	Ireland	Homo sapiens	1190	1	0	0	1.00
44	GCA_009931415.1	Bifidobacterium breve	JR01	SAMN09977286	2000-02-01	Sweden	Homo sapiens	1190	1	0	0	1.00
45	GCA_002838385.1	Bifidobacterium breve	NRBB52	SAMN06827097	2014-10-01	Netherlands	Homo sapiens	1191	1	0	0	1.00
46	GCA_002838525.1	Bifidobacterium breve	180W83	SAMN06829003	2014-10-01	Ireland	Homo sapiens	1191	1	0	0	1.00
47	GCA_001263845.1	Bifidobacterium breve MCC 0476	MCC 0476	SAMN03978797	-	Japan	Homo sapiens	1192	2	0	0	2.00
48	GCA_002838345.1	Bifidobacterium breve	NRBB57	SAMN06827912	2014-10-01	Netherlands	Homo sapiens	1192	2	0	0	2.00
49	GCA_001264045.1	Bifidobacterium breve MCC 0121	MCC 0121	SAMN03978796	-	Japan	Homo sapiens	1193	2	0	0	2.00
50	GCA_001264155.1	Bifidobacterium breve MCC 1604	MCC 1604	SAMN03978800	-	Japan	Homo sapiens	1193	2	0	0	2.00
51	GCA_003370195.1	Bifidobacterium breve	30-1	SAMN07189837	2012	Canada: Toronto	Homo sapiens	1193	1	0	0	1.00
52	GCA_000569055.1	Bifidobacterium breve 689b	689b	SAMN03081482	-	-	-	1194	1	0	0	1.00
53	GCA_002838225.1	Bifidobacterium breve	DRBB26	SAMN06827973	2014-10-01	Netherlands	Homo sapiens	1194	3	0	0	3.00
54	GCA_902651995.1	Bifidobacterium breve	-	SAMEA6160251	-	-	-	1194	2	0	0	2.00
55	GCA_024760465.1	Bifidobacterium breve	1101A	SAMN14967674	2012	Brazil: Belo Horizonte	Homo sapiens	1195	2	0	0	2.00
56	GCA_030230575.1	Bifidobacterium breve	UMB1343A	SAMN35153882	-	USA: Maywood, IL	Homo sapiens	1195	1	0	0	1.00
57	GCA_001263935.1	Bifidobacterium breve MCC 1605	MCC 1605	SAMN03978805	-	Japan	Homo sapiens	1196	2	0	0	2.00
58	GCA_000569075.1	Bifidobacterium breve S27	S27	SAMN03081483	-	-	-	1197	1	0	0	1.00
59	GCA_001189355.1	Bifidobacterium breve	BBRI4	SAMN03777307	2013-11-26	Italy: Trento	Homo sapiens	1197	3	0	0	3.00
60	GCA_002838465.1	Bifidobacterium breve	017W439	SAMN06828931	2014-10-01	Ireland	Homo sapiens	1197	1	0	0	1.00
61	GCA_900102865.1	Bifidobacterium breve	RP2	SAMN05216468	-	-	-	1197	3	0	0	3.00
62	GCA_901980275.1	Bifidobacterium breve	INIA P734	SAMEA5675151	2008	Spain	Homo sapiens	1197	1	0	0	1.00
63	GCA_000411435.1	Bifidobacterium breve HPH0326	HPH0326	SAMN02596976	-	-	-	1198	1	0	0	1.00
64	GCA_001264035.1	Bifidobacterium breve MCC 0305	MCC 0305	SAMN03978801	-	Japan	Homo sapiens	1198	2	0	0	2.00
65	GCA_902167575.1	Bifidobacterium breve	-	SAMEA5770182	-	-	-	1198	3	0	0	3.00
66	GCA_902505445.1	Bifidobacterium breve	-	SAMEA4838173	2014-08-08	United Kingdom	-	1198	1	0	0	1.00
67	GCA_902505485.1	Bifidobacterium breve	-	SAMEA4838172	2014-08-08	United Kingdom	-	1198	1	0	0	1.00
68	GCA_000247755.2	Bifidobacterium breve CECT 7263	CECT 7263	SAMN02471362	2007-09	Spain	Homo sapiens	1199	4	0	0	4.00
69	GCA_002027265.1	Bifidobacterium breve	CECT7263	SAMN06473336	-	Spain	Homo sapiens	1199	4	0	0	4.00
70	GCA_006546585.1	Bifidobacterium breve	SC95	SAMN12108292	2012-05-22	USA	Homo sapiens	1199	2	0	0	2.00
71	GCA_028201785.1	Bifidobacterium breve	BSD2780061687st1_F3_BSD3448080968_160620	SAMN31321427	2016-06-20	USA	Homo sapiens	1199	2	0	0	2.00
72	GCA_028201855.1	Bifidobacterium breve	BSD2780061687st1_C6_BSD3448080968_160620	SAMN31321426	2016-06-20	USA	Homo sapiens	1199	2	0	0	2.00
73	GCA_028201875.1	Bifidobacterium breve	BSD2780061687st1_C6_BSD2780061687_150420	SAMN31321425	2015-04-20	USA	Homo sapiens	1199	2	0	0	2.00
74	GCA_028203385.1	Bifidobacterium breve	BSD2780061687st1_H11_BSD2780061687_150420	SAMN31321428	2015-04-20	USA	Homo sapiens	1199	2	0	0	2.00
75	GCA_029723715.1	Bifidobacterium breve	LH_989	SAMN24838599	2017	United Kingdom	Homo sapiens	1199	1	0	0	1.00
76	GCA_049191365.1	Bifidobacterium breve	IATA136	SAMN45053982	2022	Spain:Valencia	Homo sapiens	1199	3	0	0	3.00
77	GCA_049204755.1	Bifidobacterium breve	IATA153	SAMN45053990	2022	Spain:Valencia	Homo sapiens	1199	5	0	0	5.00
78	GCA_002838265.1	Bifidobacterium breve	NRBB02	SAMN06827019	2014-10-01	Netherlands	Homo sapiens	1200	1	0	0	1.00
79	GCA_002838405.1	Bifidobacterium breve	NRBB51	SAMN06827096	2014-10-01	Netherlands	Homo sapiens	1200	4	0	0	4.00
80	GCA_002838585.1	Bifidobacterium breve	CNCM I-4321	SAMN06827913	2014-10-01	Netherlands	Homo sapiens	1200	4	0	0	4.00
81	GCA_002838605.1	Bifidobacterium breve	NRBB18	SAMN07160576	2014-10-01	Netherlands	Homo sapiens	1200	1	0	0	1.00
82	GCA_002838625.1	Bifidobacterium breve	NRBB19	SAMN07160980	2014-10-01	Netherlands	Homo sapiens	1200	1	0	0	1.00
83	GCA_002838645.1	Bifidobacterium breve	NRBB20	SAMN07160580	2014-10-01	Netherlands	Homo sapiens	1200	1	0	0	1.00
84	GCA_002838665.1	Bifidobacterium breve	NRBB27	SAMN07160976	2014-10-01	Netherlands	Homo sapiens	1200	1	0	0	1.00
85	GCA_002838685.1	Bifidobacterium breve	NRBB49	SAMN07160977	2014-10-01	Netherlands	Homo sapiens	1200	1	0	0	1.00
86	GCA_002838725.1	Bifidobacterium breve	DRBB30	SAMN07160979	2014-10-01	Netherlands	Homo sapiens	1200	4	0	0	4.00
87	GCA_002838745.1	Bifidobacterium breve	NRBB08	SAMN07160574	2014-10-01	Netherlands	Homo sapiens	1200	1	0	0	1.00
88	GCA_030216945.1	Bifidobacterium breve	UMB5641	SAMN34996542	2015-01	USA: Maywood, IL	Homo sapiens	1200	2	1	0	2.24
89	GCA_049191505.1	Bifidobacterium breve	IATA027	SAMN45053948	2022	Spain:Valencia	Homo sapiens	1200	3	0	0	3.00
90	GCA_000569035.1	Bifidobacterium breve NCFB 2258	NCFB 2258	SAMN03081481	-	-	-	1201	1	0	0	1.00
91	GCA_001263855.1	Bifidobacterium breve MCC 1114	MCC 1114	SAMN03978798	-	Japan	Homo sapiens	1201	1	0	0	1.00
92	GCA_001263915.1	Bifidobacterium breve MCC 1128	MCC 1128	SAMN03978799	-	Japan	Homo sapiens	1201	1	0	0	1.00
93	GCA_001546235.1	Bifidobacterium breve	GED8481	SAMN03842221	-	-	Homo sapiens	1201	2	0	0	2.00
94	GCA_002075865.1	Bifidobacterium breve	1900B	SAMN06621718	-	Italy	Homo sapiens	1201	2	0	0	2.00
95	GCA_002076075.1	Bifidobacterium breve	1889B	SAMN06621709	-	Italy	Homo sapiens	1201	1	0	0	1.00
96	GCA_002838305.1	Bifidobacterium breve	NRBB11	SAMN06827081	2014-10-01	Netherlands	Homo sapiens	1201	1	0	0	1.00
97	GCA_002914865.1	Bifidobacterium breve	BB02	SAMN07187787	2017	Italy	-	1201	2	0	0	2.00
98	GCA_024665435.1	Bifidobacterium breve	BIF195	SAMN29862206	-	-	Homo sapiens	1201	1	0	0	1.00
99	GCA_027212575.1	Bifidobacterium breve	SDS-512-OW	SAMN32244242	2019-12-12	Canada: Vancouver	Homo sapiens	1201	2	0	0	2.00
100	GCA_027212705.1	Bifidobacterium breve	SDS-736-OW	SAMN32244232	2019-10-02	Canada: Vancouver	Homo sapiens	1201	1	0	0	1.00