GCA_027214905.1 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaELLNLKBN_28 (original name was: gnl|Prokka|ELLNLKBN_28)

Region	Type	From	To	Most similar known cluster		Similarity
Region 16.1	hglE-KS	50,829	93,357

Region	Type	From	To	Most similar known cluster	Similarity
Region 16.1	hglE-KS	50,829	93,357

Compact view

gnlProkkaELLNLKBN_28 - Region 1 - hglE-KS

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Location: 50,829 - 93,357 nt. (total: 42,529 nt) Show pHMM detection rules used

hglE-KS: (hglE or hglD)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

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NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 50828 - 93357:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

ctg16_54

PKS_AT (38..333): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 53.5
Methoxymalonyl-CoA: 42.7
Methylmalonyl-CoA: 21.4
inactive: 13.9
2-Methylbutyryl-CoA: 13.9
Propionyl-CoA: 11.0
Isobutyryl-CoA: 10.1
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0