GCA_027585195.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaHJJPGBHD_55 (original name was: gnl|Prokka|HJJPGBHD_55)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	terpene	24,796	45,677

gnlProkkaHJJPGBHD_63 (original name was: gnl|Prokka|HJJPGBHD_63)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	RiPP-like	29,104	38,017

gnlProkkaHJJPGBHD_72 (original name was: gnl|Prokka|HJJPGBHD_72)

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	cyclic-lactone-autoinducer	14,074	24,748

gnlProkkaHJJPGBHD_111 (original name was: gnl|Prokka|HJJPGBHD_111)

Region	Type	From	To	Most similar known cluster		Similarity
Region 67.1	T3PKS	24,474	65,643

Region	Type	From	To	Similarity
Region 11.1	terpene	24,796	45,677
Region 19.1	RiPP-like	29,104	38,017
Region 28.1	cyclic-lactone-autoinducer	14,074	24,748
Region 67.1	T3PKS	24,474	65,643

No secondary metabolite regions were found in these records:: gnlProkkaHJJPGBHD_1 (original name was: gnl|Prokka|HJJPGBHD_1); gnlProkkaHJJPGBHD_2 (original name was: gnl|Prokka|HJJPGBHD_2); gnlProkkaHJJPGBHD_13 (original name was: gnl|Prokka|HJJPGBHD_13); gnlProkkaHJJPGBHD_24 (original name was: gnl|Prokka|HJJPGBHD_24); gnlProkkaHJJPGBHD_35 (original name was: gnl|Prokka|HJJPGBHD_35); gnlProkkaHJJPGBHD_46 (original name was: gnl|Prokka|HJJPGBHD_46); gnlProkkaHJJPGBHD_51 (original name was: gnl|Prokka|HJJPGBHD_51); gnlProkkaHJJPGBHD_52 (original name was: gnl|Prokka|HJJPGBHD_52); gnlProkkaHJJPGBHD_53 (original name was: gnl|Prokka|HJJPGBHD_53); gnlProkkaHJJPGBHD_54 (original name was: gnl|Prokka|HJJPGBHD_54); gnlProkkaHJJPGBHD_56 (original name was: gnl|Prokka|HJJPGBHD_56); gnlProkkaHJJPGBHD_57 (original name was: gnl|Prokka|HJJPGBHD_57); gnlProkkaHJJPGBHD_58 (original name was: gnl|Prokka|HJJPGBHD_58); gnlProkkaHJJPGBHD_59 (original name was: gnl|Prokka|HJJPGBHD_59); gnlProkkaHJJPGBHD_60 (original name was: gnl|Prokka|HJJPGBHD_60); gnlProkkaHJJPGBHD_61 (original name was: gnl|Prokka|HJJPGBHD_61); gnlProkkaHJJPGBHD_62 (original name was: gnl|Prokka|HJJPGBHD_62); gnlProkkaHJJPGBHD_64 (original name was: gnl|Prokka|HJJPGBHD_64); gnlProkkaHJJPGBHD_65 (original name was: gnl|Prokka|HJJPGBHD_65); gnlProkkaHJJPGBHD_66 (original name was: gnl|Prokka|HJJPGBHD_66); gnlProkkaHJJPGBHD_67 (original name was: gnl|Prokka|HJJPGBHD_67); gnlProkkaHJJPGBHD_68 (original name was: gnl|Prokka|HJJPGBHD_68); gnlProkkaHJJPGBHD_69 (original name was: gnl|Prokka|HJJPGBHD_69); gnlProkkaHJJPGBHD_70 (original name was: gnl|Prokka|HJJPGBHD_70); gnlProkkaHJJPGBHD_71 (original name was: gnl|Prokka|HJJPGBHD_71); gnlProkkaHJJPGBHD_73 (original name was: gnl|Prokka|HJJPGBHD_73); gnlProkkaHJJPGBHD_74 (original name was: gnl|Prokka|HJJPGBHD_74); gnlProkkaHJJPGBHD_75 (original name was: gnl|Prokka|HJJPGBHD_75); gnlProkkaHJJPGBHD_76 (original name was: gnl|Prokka|HJJPGBHD_76); gnlProkkaHJJPGBHD_77 (original name was: gnl|Prokka|HJJPGBHD_77); gnlProkkaHJJPGBHD_78 (original name was: gnl|Prokka|HJJPGBHD_78); gnlProkkaHJJPGBHD_79 (original name was: gnl|Prokka|HJJPGBHD_79); gnlProkkaHJJPGBHD_80 (original name was: gnl|Prokka|HJJPGBHD_80); gnlProkkaHJJPGBHD_81 (original name was: gnl|Prokka|HJJPGBHD_81); gnlProkkaHJJPGBHD_82 (original name was: gnl|Prokka|HJJPGBHD_82); gnlProkkaHJJPGBHD_83 (original name was: gnl|Prokka|HJJPGBHD_83); gnlProkkaHJJPGBHD_84 (original name was: gnl|Prokka|HJJPGBHD_84); gnlProkkaHJJPGBHD_85 (original name was: gnl|Prokka|HJJPGBHD_85); gnlProkkaHJJPGBHD_86 (original name was: gnl|Prokka|HJJPGBHD_86); gnlProkkaHJJPGBHD_87 (original name was: gnl|Prokka|HJJPGBHD_87); gnlProkkaHJJPGBHD_88 (original name was: gnl|Prokka|HJJPGBHD_88); gnlProkkaHJJPGBHD_89 (original name was: gnl|Prokka|HJJPGBHD_89); gnlProkkaHJJPGBHD_90 (original name was: gnl|Prokka|HJJPGBHD_90); gnlProkkaHJJPGBHD_91 (original name was: gnl|Prokka|HJJPGBHD_91); gnlProkkaHJJPGBHD_92 (original name was: gnl|Prokka|HJJPGBHD_92); gnlProkkaHJJPGBHD_93 (original name was: gnl|Prokka|HJJPGBHD_93); gnlProkkaHJJPGBHD_94 (original name was: gnl|Prokka|HJJPGBHD_94); gnlProkkaHJJPGBHD_95 (original name was: gnl|Prokka|HJJPGBHD_95); gnlProkkaHJJPGBHD_96 (original name was: gnl|Prokka|HJJPGBHD_96); gnlProkkaHJJPGBHD_97 (original name was: gnl|Prokka|HJJPGBHD_97); gnlProkkaHJJPGBHD_98 (original name was: gnl|Prokka|HJJPGBHD_98); gnlProkkaHJJPGBHD_99 (original name was: gnl|Prokka|HJJPGBHD_99); gnlProkkaHJJPGBHD_100 (original name was: gnl|Prokka|HJJPGBHD_100); gnlProkkaHJJPGBHD_101 (original name was: gnl|Prokka|HJJPGBHD_101); gnlProkkaHJJPGBHD_102 (original name was: gnl|Prokka|HJJPGBHD_102); gnlProkkaHJJPGBHD_103 (original name was: gnl|Prokka|HJJPGBHD_103); gnlProkkaHJJPGBHD_104 (original name was: gnl|Prokka|HJJPGBHD_104); gnlProkkaHJJPGBHD_105 (original name was: gnl|Prokka|HJJPGBHD_105); gnlProkkaHJJPGBHD_106 (original name was: gnl|Prokka|HJJPGBHD_106); gnlProkkaHJJPGBHD_107 (original name was: gnl|Prokka|HJJPGBHD_107); gnlProkkaHJJPGBHD_108 (original name was: gnl|Prokka|HJJPGBHD_108); gnlProkkaHJJPGBHD_109 (original name was: gnl|Prokka|HJJPGBHD_109); gnlProkkaHJJPGBHD_110 (original name was: gnl|Prokka|HJJPGBHD_110); gnlProkkaHJJPGBHD_112 (original name was: gnl|Prokka|HJJPGBHD_112); gnlProkkaHJJPGBHD_113 (original name was: gnl|Prokka|HJJPGBHD_113); gnlProkkaHJJPGBHD_114 (original name was: gnl|Prokka|HJJPGBHD_114); gnlProkkaHJJPGBHD_115 (original name was: gnl|Prokka|HJJPGBHD_115); gnlProkkaHJJPGBHD_116 (original name was: gnl|Prokka|HJJPGBHD_116); gnlProkkaHJJPGBHD_117 (original name was: gnl|Prokka|HJJPGBHD_117); gnlProkkaHJJPGBHD_118 (original name was: gnl|Prokka|HJJPGBHD_118); gnlProkkaHJJPGBHD_119 (original name was: gnl|Prokka|HJJPGBHD_119); gnlProkkaHJJPGBHD_120 (original name was: gnl|Prokka|HJJPGBHD_120); gnlProkkaHJJPGBHD_121 (original name was: gnl|Prokka|HJJPGBHD_121); gnlProkkaHJJPGBHD_122 (original name was: gnl|Prokka|HJJPGBHD_122); gnlProkkaHJJPGBHD_123 (original name was: gnl|Prokka|HJJPGBHD_123); gnlProkkaHJJPGBHD_124 (original name was: gnl|Prokka|HJJPGBHD_124); gnlProkkaHJJPGBHD_125 (original name was: gnl|Prokka|HJJPGBHD_125); gnlProkkaHJJPGBHD_126 (original name was: gnl|Prokka|HJJPGBHD_126); gnlProkkaHJJPGBHD_127 (original name was: gnl|Prokka|HJJPGBHD_127); gnlProkkaHJJPGBHD_128 (original name was: gnl|Prokka|HJJPGBHD_128); gnlProkkaHJJPGBHD_129 (original name was: gnl|Prokka|HJJPGBHD_129); gnlProkkaHJJPGBHD_130 (original name was: gnl|Prokka|HJJPGBHD_130); gnlProkkaHJJPGBHD_131 (original name was: gnl|Prokka|HJJPGBHD_131); gnlProkkaHJJPGBHD_133 (original name was: gnl|Prokka|HJJPGBHD_133)

Compact view

gnlProkkaHJJPGBHD_55 - Region 1 - terpene

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Location: 24,796 - 45,677 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHJJPGBHD_63 - Region 1 - RiPP-like

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Location: 29,104 - 38,017 nt. (total: 8,914 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHJJPGBHD_72 - Region 1 - cyclic-lactone-autoinducer

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Location: 14,074 - 24,748 nt. (total: 10,675 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHJJPGBHD_111 - Region 1 - T3PKS

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Location: 24,474 - 65,643 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.