GCA_027585225.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMDFFFNPD_59 (original name was: gnl|Prokka|MDFFFNPD_59)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	terpene	24,808	45,689

gnlProkkaMDFFFNPD_70 (original name was: gnl|Prokka|MDFFFNPD_70)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	RiPP-like	1	8,914

gnlProkkaMDFFFNPD_115 (original name was: gnl|Prokka|MDFFFNPD_115)

Region	Type	From	To	Most similar known cluster		Similarity
Region 67.1	T3PKS	84,553	115,395

Region	Type	From	To	Similarity
Region 11.1	terpene	24,808	45,689
Region 22.1	RiPP-like	1	8,914
Region 67.1	T3PKS	84,553	115,395

No secondary metabolite regions were found in these records:: gnlProkkaMDFFFNPD_1 (original name was: gnl|Prokka|MDFFFNPD_1); gnlProkkaMDFFFNPD_2 (original name was: gnl|Prokka|MDFFFNPD_2); gnlProkkaMDFFFNPD_13 (original name was: gnl|Prokka|MDFFFNPD_13); gnlProkkaMDFFFNPD_23 (original name was: gnl|Prokka|MDFFFNPD_23); gnlProkkaMDFFFNPD_33 (original name was: gnl|Prokka|MDFFFNPD_33); gnlProkkaMDFFFNPD_44 (original name was: gnl|Prokka|MDFFFNPD_44); gnlProkkaMDFFFNPD_53 (original name was: gnl|Prokka|MDFFFNPD_53); gnlProkkaMDFFFNPD_56 (original name was: gnl|Prokka|MDFFFNPD_56); gnlProkkaMDFFFNPD_57 (original name was: gnl|Prokka|MDFFFNPD_57); gnlProkkaMDFFFNPD_58 (original name was: gnl|Prokka|MDFFFNPD_58); gnlProkkaMDFFFNPD_60 (original name was: gnl|Prokka|MDFFFNPD_60); gnlProkkaMDFFFNPD_61 (original name was: gnl|Prokka|MDFFFNPD_61); gnlProkkaMDFFFNPD_62 (original name was: gnl|Prokka|MDFFFNPD_62); gnlProkkaMDFFFNPD_63 (original name was: gnl|Prokka|MDFFFNPD_63); gnlProkkaMDFFFNPD_64 (original name was: gnl|Prokka|MDFFFNPD_64); gnlProkkaMDFFFNPD_65 (original name was: gnl|Prokka|MDFFFNPD_65); gnlProkkaMDFFFNPD_66 (original name was: gnl|Prokka|MDFFFNPD_66); gnlProkkaMDFFFNPD_67 (original name was: gnl|Prokka|MDFFFNPD_67); gnlProkkaMDFFFNPD_68 (original name was: gnl|Prokka|MDFFFNPD_68); gnlProkkaMDFFFNPD_69 (original name was: gnl|Prokka|MDFFFNPD_69); gnlProkkaMDFFFNPD_71 (original name was: gnl|Prokka|MDFFFNPD_71); gnlProkkaMDFFFNPD_72 (original name was: gnl|Prokka|MDFFFNPD_72); gnlProkkaMDFFFNPD_73 (original name was: gnl|Prokka|MDFFFNPD_73); gnlProkkaMDFFFNPD_74 (original name was: gnl|Prokka|MDFFFNPD_74); gnlProkkaMDFFFNPD_75 (original name was: gnl|Prokka|MDFFFNPD_75); gnlProkkaMDFFFNPD_76 (original name was: gnl|Prokka|MDFFFNPD_76); gnlProkkaMDFFFNPD_77 (original name was: gnl|Prokka|MDFFFNPD_77); gnlProkkaMDFFFNPD_78 (original name was: gnl|Prokka|MDFFFNPD_78); gnlProkkaMDFFFNPD_79 (original name was: gnl|Prokka|MDFFFNPD_79); gnlProkkaMDFFFNPD_80 (original name was: gnl|Prokka|MDFFFNPD_80); gnlProkkaMDFFFNPD_81 (original name was: gnl|Prokka|MDFFFNPD_81); gnlProkkaMDFFFNPD_82 (original name was: gnl|Prokka|MDFFFNPD_82); gnlProkkaMDFFFNPD_83 (original name was: gnl|Prokka|MDFFFNPD_83); gnlProkkaMDFFFNPD_84 (original name was: gnl|Prokka|MDFFFNPD_84); gnlProkkaMDFFFNPD_85 (original name was: gnl|Prokka|MDFFFNPD_85); gnlProkkaMDFFFNPD_86 (original name was: gnl|Prokka|MDFFFNPD_86); gnlProkkaMDFFFNPD_87 (original name was: gnl|Prokka|MDFFFNPD_87); gnlProkkaMDFFFNPD_88 (original name was: gnl|Prokka|MDFFFNPD_88); gnlProkkaMDFFFNPD_89 (original name was: gnl|Prokka|MDFFFNPD_89); gnlProkkaMDFFFNPD_90 (original name was: gnl|Prokka|MDFFFNPD_90); gnlProkkaMDFFFNPD_91 (original name was: gnl|Prokka|MDFFFNPD_91); gnlProkkaMDFFFNPD_92 (original name was: gnl|Prokka|MDFFFNPD_92); gnlProkkaMDFFFNPD_93 (original name was: gnl|Prokka|MDFFFNPD_93); gnlProkkaMDFFFNPD_94 (original name was: gnl|Prokka|MDFFFNPD_94); gnlProkkaMDFFFNPD_95 (original name was: gnl|Prokka|MDFFFNPD_95); gnlProkkaMDFFFNPD_96 (original name was: gnl|Prokka|MDFFFNPD_96); gnlProkkaMDFFFNPD_97 (original name was: gnl|Prokka|MDFFFNPD_97); gnlProkkaMDFFFNPD_98 (original name was: gnl|Prokka|MDFFFNPD_98); gnlProkkaMDFFFNPD_99 (original name was: gnl|Prokka|MDFFFNPD_99); gnlProkkaMDFFFNPD_100 (original name was: gnl|Prokka|MDFFFNPD_100); gnlProkkaMDFFFNPD_101 (original name was: gnl|Prokka|MDFFFNPD_101); gnlProkkaMDFFFNPD_102 (original name was: gnl|Prokka|MDFFFNPD_102); gnlProkkaMDFFFNPD_103 (original name was: gnl|Prokka|MDFFFNPD_103); gnlProkkaMDFFFNPD_104 (original name was: gnl|Prokka|MDFFFNPD_104); gnlProkkaMDFFFNPD_105 (original name was: gnl|Prokka|MDFFFNPD_105); gnlProkkaMDFFFNPD_106 (original name was: gnl|Prokka|MDFFFNPD_106); gnlProkkaMDFFFNPD_107 (original name was: gnl|Prokka|MDFFFNPD_107); gnlProkkaMDFFFNPD_108 (original name was: gnl|Prokka|MDFFFNPD_108); gnlProkkaMDFFFNPD_109 (original name was: gnl|Prokka|MDFFFNPD_109); gnlProkkaMDFFFNPD_110 (original name was: gnl|Prokka|MDFFFNPD_110); gnlProkkaMDFFFNPD_111 (original name was: gnl|Prokka|MDFFFNPD_111); gnlProkkaMDFFFNPD_112 (original name was: gnl|Prokka|MDFFFNPD_112); gnlProkkaMDFFFNPD_113 (original name was: gnl|Prokka|MDFFFNPD_113); gnlProkkaMDFFFNPD_114 (original name was: gnl|Prokka|MDFFFNPD_114); gnlProkkaMDFFFNPD_116 (original name was: gnl|Prokka|MDFFFNPD_116); gnlProkkaMDFFFNPD_117 (original name was: gnl|Prokka|MDFFFNPD_117); gnlProkkaMDFFFNPD_118 (original name was: gnl|Prokka|MDFFFNPD_118); gnlProkkaMDFFFNPD_119 (original name was: gnl|Prokka|MDFFFNPD_119); gnlProkkaMDFFFNPD_120 (original name was: gnl|Prokka|MDFFFNPD_120); gnlProkkaMDFFFNPD_121 (original name was: gnl|Prokka|MDFFFNPD_121); gnlProkkaMDFFFNPD_122 (original name was: gnl|Prokka|MDFFFNPD_122); gnlProkkaMDFFFNPD_123 (original name was: gnl|Prokka|MDFFFNPD_123); gnlProkkaMDFFFNPD_124 (original name was: gnl|Prokka|MDFFFNPD_124); gnlProkkaMDFFFNPD_125 (original name was: gnl|Prokka|MDFFFNPD_125); gnlProkkaMDFFFNPD_126 (original name was: gnl|Prokka|MDFFFNPD_126); gnlProkkaMDFFFNPD_127 (original name was: gnl|Prokka|MDFFFNPD_127); gnlProkkaMDFFFNPD_128 (original name was: gnl|Prokka|MDFFFNPD_128); gnlProkkaMDFFFNPD_129 (original name was: gnl|Prokka|MDFFFNPD_129); gnlProkkaMDFFFNPD_130 (original name was: gnl|Prokka|MDFFFNPD_130); gnlProkkaMDFFFNPD_131 (original name was: gnl|Prokka|MDFFFNPD_131); gnlProkkaMDFFFNPD_132 (original name was: gnl|Prokka|MDFFFNPD_132); gnlProkkaMDFFFNPD_133 (original name was: gnl|Prokka|MDFFFNPD_133); gnlProkkaMDFFFNPD_134 (original name was: gnl|Prokka|MDFFFNPD_134); gnlProkkaMDFFFNPD_135 (original name was: gnl|Prokka|MDFFFNPD_135); gnlProkkaMDFFFNPD_136 (original name was: gnl|Prokka|MDFFFNPD_136); gnlProkkaMDFFFNPD_137 (original name was: gnl|Prokka|MDFFFNPD_137); gnlProkkaMDFFFNPD_138 (original name was: gnl|Prokka|MDFFFNPD_138); gnlProkkaMDFFFNPD_139 (original name was: gnl|Prokka|MDFFFNPD_139); gnlProkkaMDFFFNPD_140 (original name was: gnl|Prokka|MDFFFNPD_140)

Compact view

gnlProkkaMDFFFNPD_59 - Region 1 - terpene

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Location: 24,808 - 45,689 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMDFFFNPD_70 - Region 1 - RiPP-like

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Location: 1 - 8,914 nt. (total: 8,914 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMDFFFNPD_115 - Region 1 - T3PKS

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Location: 84,553 - 115,395 nt. (total: 30,843 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.