GCA_027585395.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaLLCBLIMC_47 (original name was: gnl|Prokka|LLCBLIMC_47)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	terpene	7,852	28,733

gnlProkkaLLCBLIMC_51 (original name was: gnl|Prokka|LLCBLIMC_51)

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	RiPP-like	29,142	38,093

gnlProkkaLLCBLIMC_55 (original name was: gnl|Prokka|LLCBLIMC_55)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	cyclic-lactone-autoinducer	1	16,788

gnlProkkaLLCBLIMC_57 (original name was: gnl|Prokka|LLCBLIMC_57)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	T3PKS	90,081	131,250

Region	Type	From	To	Similarity
Region 13.1	terpene	7,852	28,733
Region 17.1	RiPP-like	29,142	38,093
Region 21.1	cyclic-lactone-autoinducer	1	16,788
Region 23.1	T3PKS	90,081	131,250

No secondary metabolite regions were found in these records:: gnlProkkaLLCBLIMC_1 (original name was: gnl|Prokka|LLCBLIMC_1); gnlProkkaLLCBLIMC_2 (original name was: gnl|Prokka|LLCBLIMC_2); gnlProkkaLLCBLIMC_13 (original name was: gnl|Prokka|LLCBLIMC_13); gnlProkkaLLCBLIMC_24 (original name was: gnl|Prokka|LLCBLIMC_24); gnlProkkaLLCBLIMC_35 (original name was: gnl|Prokka|LLCBLIMC_35); gnlProkkaLLCBLIMC_40 (original name was: gnl|Prokka|LLCBLIMC_40); gnlProkkaLLCBLIMC_41 (original name was: gnl|Prokka|LLCBLIMC_41); gnlProkkaLLCBLIMC_42 (original name was: gnl|Prokka|LLCBLIMC_42); gnlProkkaLLCBLIMC_43 (original name was: gnl|Prokka|LLCBLIMC_43); gnlProkkaLLCBLIMC_44 (original name was: gnl|Prokka|LLCBLIMC_44); gnlProkkaLLCBLIMC_45 (original name was: gnl|Prokka|LLCBLIMC_45); gnlProkkaLLCBLIMC_46 (original name was: gnl|Prokka|LLCBLIMC_46); gnlProkkaLLCBLIMC_48 (original name was: gnl|Prokka|LLCBLIMC_48); gnlProkkaLLCBLIMC_49 (original name was: gnl|Prokka|LLCBLIMC_49); gnlProkkaLLCBLIMC_50 (original name was: gnl|Prokka|LLCBLIMC_50); gnlProkkaLLCBLIMC_52 (original name was: gnl|Prokka|LLCBLIMC_52); gnlProkkaLLCBLIMC_53 (original name was: gnl|Prokka|LLCBLIMC_53); gnlProkkaLLCBLIMC_54 (original name was: gnl|Prokka|LLCBLIMC_54); gnlProkkaLLCBLIMC_56 (original name was: gnl|Prokka|LLCBLIMC_56); gnlProkkaLLCBLIMC_58 (original name was: gnl|Prokka|LLCBLIMC_58); gnlProkkaLLCBLIMC_59 (original name was: gnl|Prokka|LLCBLIMC_59); gnlProkkaLLCBLIMC_60 (original name was: gnl|Prokka|LLCBLIMC_60); gnlProkkaLLCBLIMC_61 (original name was: gnl|Prokka|LLCBLIMC_61); gnlProkkaLLCBLIMC_62 (original name was: gnl|Prokka|LLCBLIMC_62); gnlProkkaLLCBLIMC_63 (original name was: gnl|Prokka|LLCBLIMC_63); gnlProkkaLLCBLIMC_64 (original name was: gnl|Prokka|LLCBLIMC_64); gnlProkkaLLCBLIMC_65 (original name was: gnl|Prokka|LLCBLIMC_65); gnlProkkaLLCBLIMC_66 (original name was: gnl|Prokka|LLCBLIMC_66); gnlProkkaLLCBLIMC_67 (original name was: gnl|Prokka|LLCBLIMC_67); gnlProkkaLLCBLIMC_68 (original name was: gnl|Prokka|LLCBLIMC_68); gnlProkkaLLCBLIMC_69 (original name was: gnl|Prokka|LLCBLIMC_69); gnlProkkaLLCBLIMC_70 (original name was: gnl|Prokka|LLCBLIMC_70); gnlProkkaLLCBLIMC_71 (original name was: gnl|Prokka|LLCBLIMC_71); gnlProkkaLLCBLIMC_72 (original name was: gnl|Prokka|LLCBLIMC_72); gnlProkkaLLCBLIMC_73 (original name was: gnl|Prokka|LLCBLIMC_73); gnlProkkaLLCBLIMC_74 (original name was: gnl|Prokka|LLCBLIMC_74); gnlProkkaLLCBLIMC_75 (original name was: gnl|Prokka|LLCBLIMC_75); gnlProkkaLLCBLIMC_76 (original name was: gnl|Prokka|LLCBLIMC_76); gnlProkkaLLCBLIMC_77 (original name was: gnl|Prokka|LLCBLIMC_77); gnlProkkaLLCBLIMC_78 (original name was: gnl|Prokka|LLCBLIMC_78); gnlProkkaLLCBLIMC_79 (original name was: gnl|Prokka|LLCBLIMC_79); gnlProkkaLLCBLIMC_80 (original name was: gnl|Prokka|LLCBLIMC_80); gnlProkkaLLCBLIMC_81 (original name was: gnl|Prokka|LLCBLIMC_81); gnlProkkaLLCBLIMC_82 (original name was: gnl|Prokka|LLCBLIMC_82); gnlProkkaLLCBLIMC_83 (original name was: gnl|Prokka|LLCBLIMC_83); gnlProkkaLLCBLIMC_84 (original name was: gnl|Prokka|LLCBLIMC_84); gnlProkkaLLCBLIMC_85 (original name was: gnl|Prokka|LLCBLIMC_85); gnlProkkaLLCBLIMC_86 (original name was: gnl|Prokka|LLCBLIMC_86); gnlProkkaLLCBLIMC_87 (original name was: gnl|Prokka|LLCBLIMC_87); gnlProkkaLLCBLIMC_88 (original name was: gnl|Prokka|LLCBLIMC_88); gnlProkkaLLCBLIMC_89 (original name was: gnl|Prokka|LLCBLIMC_89); gnlProkkaLLCBLIMC_90 (original name was: gnl|Prokka|LLCBLIMC_90); gnlProkkaLLCBLIMC_91 (original name was: gnl|Prokka|LLCBLIMC_91); gnlProkkaLLCBLIMC_92 (original name was: gnl|Prokka|LLCBLIMC_92); gnlProkkaLLCBLIMC_93 (original name was: gnl|Prokka|LLCBLIMC_93); gnlProkkaLLCBLIMC_94 (original name was: gnl|Prokka|LLCBLIMC_94); gnlProkkaLLCBLIMC_95 (original name was: gnl|Prokka|LLCBLIMC_95); gnlProkkaLLCBLIMC_101 (original name was: gnl|Prokka|LLCBLIMC_101); gnlProkkaLLCBLIMC_112 (original name was: gnl|Prokka|LLCBLIMC_112); gnlProkkaLLCBLIMC_123 (original name was: gnl|Prokka|LLCBLIMC_123)

Compact view

gnlProkkaLLCBLIMC_47 - Region 1 - terpene

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Location: 7,852 - 28,733 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLLCBLIMC_51 - Region 1 - RiPP-like

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Location: 29,142 - 38,093 nt. (total: 8,952 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLLCBLIMC_55 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 16,788 nt. (total: 16,788 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLLCBLIMC_57 - Region 1 - T3PKS

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Location: 90,081 - 131,250 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.