GCA_027661645.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaHIGDBMJJ_3 (original name was: gnl|Prokka|HIGDBMJJ_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RRE-containing	129,921	150,271

gnlProkkaHIGDBMJJ_23 (original name was: gnl|Prokka|HIGDBMJJ_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	arylpolyene	211,786	259,568	flexirubin	Other	48%

gnlProkkaHIGDBMJJ_78 (original name was: gnl|Prokka|HIGDBMJJ_78)

Region	Type	From	To	Most similar known cluster		Similarity
Region 78.1	phosphonate	162,624	176,144	polysaccharide B	Saccharide	6%

Region	Type	From	To	Most similar known cluster	Similarity
Region 3.1	RRE-containing	129,921	150,271
Region 23.1	arylpolyene	211,786	259,568	flexirubin	Other	48%
Region 78.1	phosphonate	162,624	176,144	polysaccharide B	Saccharide	6%

No secondary metabolite regions were found in these records:: gnlProkkaHIGDBMJJ_1 (original name was: gnl|Prokka|HIGDBMJJ_1); gnlProkkaHIGDBMJJ_2 (original name was: gnl|Prokka|HIGDBMJJ_2); gnlProkkaHIGDBMJJ_4 (original name was: gnl|Prokka|HIGDBMJJ_4); gnlProkkaHIGDBMJJ_5 (original name was: gnl|Prokka|HIGDBMJJ_5); gnlProkkaHIGDBMJJ_6 (original name was: gnl|Prokka|HIGDBMJJ_6); gnlProkkaHIGDBMJJ_7 (original name was: gnl|Prokka|HIGDBMJJ_7); gnlProkkaHIGDBMJJ_8 (original name was: gnl|Prokka|HIGDBMJJ_8); gnlProkkaHIGDBMJJ_9 (original name was: gnl|Prokka|HIGDBMJJ_9); gnlProkkaHIGDBMJJ_10 (original name was: gnl|Prokka|HIGDBMJJ_10); gnlProkkaHIGDBMJJ_11 (original name was: gnl|Prokka|HIGDBMJJ_11); gnlProkkaHIGDBMJJ_12 (original name was: gnl|Prokka|HIGDBMJJ_12); gnlProkkaHIGDBMJJ_13 (original name was: gnl|Prokka|HIGDBMJJ_13); gnlProkkaHIGDBMJJ_14 (original name was: gnl|Prokka|HIGDBMJJ_14); gnlProkkaHIGDBMJJ_15 (original name was: gnl|Prokka|HIGDBMJJ_15); gnlProkkaHIGDBMJJ_16 (original name was: gnl|Prokka|HIGDBMJJ_16); gnlProkkaHIGDBMJJ_17 (original name was: gnl|Prokka|HIGDBMJJ_17); gnlProkkaHIGDBMJJ_18 (original name was: gnl|Prokka|HIGDBMJJ_18); gnlProkkaHIGDBMJJ_19 (original name was: gnl|Prokka|HIGDBMJJ_19); gnlProkkaHIGDBMJJ_20 (original name was: gnl|Prokka|HIGDBMJJ_20); gnlProkkaHIGDBMJJ_21 (original name was: gnl|Prokka|HIGDBMJJ_21); gnlProkkaHIGDBMJJ_22 (original name was: gnl|Prokka|HIGDBMJJ_22); gnlProkkaHIGDBMJJ_24 (original name was: gnl|Prokka|HIGDBMJJ_24); gnlProkkaHIGDBMJJ_25 (original name was: gnl|Prokka|HIGDBMJJ_25); gnlProkkaHIGDBMJJ_26 (original name was: gnl|Prokka|HIGDBMJJ_26); gnlProkkaHIGDBMJJ_27 (original name was: gnl|Prokka|HIGDBMJJ_27); gnlProkkaHIGDBMJJ_28 (original name was: gnl|Prokka|HIGDBMJJ_28); gnlProkkaHIGDBMJJ_29 (original name was: gnl|Prokka|HIGDBMJJ_29); gnlProkkaHIGDBMJJ_30 (original name was: gnl|Prokka|HIGDBMJJ_30); gnlProkkaHIGDBMJJ_31 (original name was: gnl|Prokka|HIGDBMJJ_31); gnlProkkaHIGDBMJJ_32 (original name was: gnl|Prokka|HIGDBMJJ_32); gnlProkkaHIGDBMJJ_33 (original name was: gnl|Prokka|HIGDBMJJ_33); gnlProkkaHIGDBMJJ_34 (original name was: gnl|Prokka|HIGDBMJJ_34); gnlProkkaHIGDBMJJ_35 (original name was: gnl|Prokka|HIGDBMJJ_35); gnlProkkaHIGDBMJJ_36 (original name was: gnl|Prokka|HIGDBMJJ_36); gnlProkkaHIGDBMJJ_37 (original name was: gnl|Prokka|HIGDBMJJ_37); gnlProkkaHIGDBMJJ_38 (original name was: gnl|Prokka|HIGDBMJJ_38); gnlProkkaHIGDBMJJ_39 (original name was: gnl|Prokka|HIGDBMJJ_39); gnlProkkaHIGDBMJJ_40 (original name was: gnl|Prokka|HIGDBMJJ_40); gnlProkkaHIGDBMJJ_41 (original name was: gnl|Prokka|HIGDBMJJ_41); gnlProkkaHIGDBMJJ_42 (original name was: gnl|Prokka|HIGDBMJJ_42); gnlProkkaHIGDBMJJ_43 (original name was: gnl|Prokka|HIGDBMJJ_43); gnlProkkaHIGDBMJJ_44 (original name was: gnl|Prokka|HIGDBMJJ_44); gnlProkkaHIGDBMJJ_45 (original name was: gnl|Prokka|HIGDBMJJ_45); gnlProkkaHIGDBMJJ_46 (original name was: gnl|Prokka|HIGDBMJJ_46); gnlProkkaHIGDBMJJ_47 (original name was: gnl|Prokka|HIGDBMJJ_47); gnlProkkaHIGDBMJJ_48 (original name was: gnl|Prokka|HIGDBMJJ_48); gnlProkkaHIGDBMJJ_49 (original name was: gnl|Prokka|HIGDBMJJ_49); gnlProkkaHIGDBMJJ_50 (original name was: gnl|Prokka|HIGDBMJJ_50); gnlProkkaHIGDBMJJ_51 (original name was: gnl|Prokka|HIGDBMJJ_51); gnlProkkaHIGDBMJJ_52 (original name was: gnl|Prokka|HIGDBMJJ_52); gnlProkkaHIGDBMJJ_53 (original name was: gnl|Prokka|HIGDBMJJ_53); gnlProkkaHIGDBMJJ_54 (original name was: gnl|Prokka|HIGDBMJJ_54); gnlProkkaHIGDBMJJ_55 (original name was: gnl|Prokka|HIGDBMJJ_55); gnlProkkaHIGDBMJJ_56 (original name was: gnl|Prokka|HIGDBMJJ_56); gnlProkkaHIGDBMJJ_57 (original name was: gnl|Prokka|HIGDBMJJ_57); gnlProkkaHIGDBMJJ_58 (original name was: gnl|Prokka|HIGDBMJJ_58); gnlProkkaHIGDBMJJ_59 (original name was: gnl|Prokka|HIGDBMJJ_59); gnlProkkaHIGDBMJJ_60 (original name was: gnl|Prokka|HIGDBMJJ_60); gnlProkkaHIGDBMJJ_61 (original name was: gnl|Prokka|HIGDBMJJ_61); gnlProkkaHIGDBMJJ_62 (original name was: gnl|Prokka|HIGDBMJJ_62); gnlProkkaHIGDBMJJ_63 (original name was: gnl|Prokka|HIGDBMJJ_63); gnlProkkaHIGDBMJJ_64 (original name was: gnl|Prokka|HIGDBMJJ_64); gnlProkkaHIGDBMJJ_65 (original name was: gnl|Prokka|HIGDBMJJ_65); gnlProkkaHIGDBMJJ_66 (original name was: gnl|Prokka|HIGDBMJJ_66); gnlProkkaHIGDBMJJ_67 (original name was: gnl|Prokka|HIGDBMJJ_67); gnlProkkaHIGDBMJJ_68 (original name was: gnl|Prokka|HIGDBMJJ_68); gnlProkkaHIGDBMJJ_69 (original name was: gnl|Prokka|HIGDBMJJ_69); gnlProkkaHIGDBMJJ_70 (original name was: gnl|Prokka|HIGDBMJJ_70); gnlProkkaHIGDBMJJ_71 (original name was: gnl|Prokka|HIGDBMJJ_71); gnlProkkaHIGDBMJJ_72 (original name was: gnl|Prokka|HIGDBMJJ_72); gnlProkkaHIGDBMJJ_73 (original name was: gnl|Prokka|HIGDBMJJ_73); gnlProkkaHIGDBMJJ_74 (original name was: gnl|Prokka|HIGDBMJJ_74); gnlProkkaHIGDBMJJ_75 (original name was: gnl|Prokka|HIGDBMJJ_75); gnlProkkaHIGDBMJJ_76 (original name was: gnl|Prokka|HIGDBMJJ_76); gnlProkkaHIGDBMJJ_77 (original name was: gnl|Prokka|HIGDBMJJ_77); gnlProkkaHIGDBMJJ_79 (original name was: gnl|Prokka|HIGDBMJJ_79); gnlProkkaHIGDBMJJ_80 (original name was: gnl|Prokka|HIGDBMJJ_80); gnlProkkaHIGDBMJJ_81 (original name was: gnl|Prokka|HIGDBMJJ_81); gnlProkkaHIGDBMJJ_89 (original name was: gnl|Prokka|HIGDBMJJ_89)

Compact view

gnlProkkaHIGDBMJJ_3 - Region 1 - RRE-containing

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Location: 129,921 - 150,271 nt. (total: 20,351 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHIGDBMJJ_23 - Region 1 - arylpolyene

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Location: 211,786 - 259,568 nt. (total: 47,783 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg23_174

AMP-binding (50..290): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

gnlProkkaHIGDBMJJ_78 - Region 1 - phosphonate

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Location: 162,624 - 176,144 nt. (total: 13,521 nt) Show pHMM detection rules used

Region on contig edge.

phosphonate: (phosphonates and minimum(1, [2-Hacid_dh_C, Aldedh, Aminotran_1_2, Aminotran_5, AurF, CTP_transf_like, DUF4992, Fe-ADH, HMGL-like, Metallophos_2, NTP_transf_3, NTP_transf_5, PALP, PEP_mutase, TPP_enzyme_C, TPP_enzyme_N, phosphonates]) and not (phosphonatesHydrolase or phosphonatesMeIsocitrateLyase))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1