GCA_027662045.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaLJFCJMGI_1 (original name was: gnl|Prokka|LJFCJMGI_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	ranthipeptide	286,034	307,699

gnlProkkaLJFCJMGI_47 (original name was: gnl|Prokka|LJFCJMGI_47)

Region	Type	From	To	Most similar known cluster		Similarity
Region 47.1	lassopeptide	1	1,734

gnlProkkaLJFCJMGI_73 (original name was: gnl|Prokka|LJFCJMGI_73)

Region	Type	From	To	Most similar known cluster		Similarity
Region 59.1	cyclic-lactone-autoinducer	1	19,252

Region	Type	From	To	Similarity
Region 1.1	ranthipeptide	286,034	307,699
Region 47.1	lassopeptide	1	1,734
Region 59.1	cyclic-lactone-autoinducer	1	19,252

No secondary metabolite regions were found in these records:: gnlProkkaLJFCJMGI_2 (original name was: gnl|Prokka|LJFCJMGI_2); gnlProkkaLJFCJMGI_3 (original name was: gnl|Prokka|LJFCJMGI_3); gnlProkkaLJFCJMGI_4 (original name was: gnl|Prokka|LJFCJMGI_4); gnlProkkaLJFCJMGI_5 (original name was: gnl|Prokka|LJFCJMGI_5); gnlProkkaLJFCJMGI_6 (original name was: gnl|Prokka|LJFCJMGI_6); gnlProkkaLJFCJMGI_7 (original name was: gnl|Prokka|LJFCJMGI_7); gnlProkkaLJFCJMGI_8 (original name was: gnl|Prokka|LJFCJMGI_8); gnlProkkaLJFCJMGI_9 (original name was: gnl|Prokka|LJFCJMGI_9); gnlProkkaLJFCJMGI_10 (original name was: gnl|Prokka|LJFCJMGI_10); gnlProkkaLJFCJMGI_11 (original name was: gnl|Prokka|LJFCJMGI_11); gnlProkkaLJFCJMGI_12 (original name was: gnl|Prokka|LJFCJMGI_12); gnlProkkaLJFCJMGI_13 (original name was: gnl|Prokka|LJFCJMGI_13); gnlProkkaLJFCJMGI_14 (original name was: gnl|Prokka|LJFCJMGI_14); gnlProkkaLJFCJMGI_15 (original name was: gnl|Prokka|LJFCJMGI_15); gnlProkkaLJFCJMGI_16 (original name was: gnl|Prokka|LJFCJMGI_16); gnlProkkaLJFCJMGI_17 (original name was: gnl|Prokka|LJFCJMGI_17); gnlProkkaLJFCJMGI_18 (original name was: gnl|Prokka|LJFCJMGI_18); gnlProkkaLJFCJMGI_19 (original name was: gnl|Prokka|LJFCJMGI_19); gnlProkkaLJFCJMGI_20 (original name was: gnl|Prokka|LJFCJMGI_20); gnlProkkaLJFCJMGI_21 (original name was: gnl|Prokka|LJFCJMGI_21); gnlProkkaLJFCJMGI_22 (original name was: gnl|Prokka|LJFCJMGI_22); gnlProkkaLJFCJMGI_23 (original name was: gnl|Prokka|LJFCJMGI_23); gnlProkkaLJFCJMGI_24 (original name was: gnl|Prokka|LJFCJMGI_24); gnlProkkaLJFCJMGI_25 (original name was: gnl|Prokka|LJFCJMGI_25); gnlProkkaLJFCJMGI_26 (original name was: gnl|Prokka|LJFCJMGI_26); gnlProkkaLJFCJMGI_27 (original name was: gnl|Prokka|LJFCJMGI_27); gnlProkkaLJFCJMGI_28 (original name was: gnl|Prokka|LJFCJMGI_28); gnlProkkaLJFCJMGI_29 (original name was: gnl|Prokka|LJFCJMGI_29); gnlProkkaLJFCJMGI_30 (original name was: gnl|Prokka|LJFCJMGI_30); gnlProkkaLJFCJMGI_31 (original name was: gnl|Prokka|LJFCJMGI_31); gnlProkkaLJFCJMGI_32 (original name was: gnl|Prokka|LJFCJMGI_32); gnlProkkaLJFCJMGI_33 (original name was: gnl|Prokka|LJFCJMGI_33); gnlProkkaLJFCJMGI_34 (original name was: gnl|Prokka|LJFCJMGI_34); gnlProkkaLJFCJMGI_35 (original name was: gnl|Prokka|LJFCJMGI_35); gnlProkkaLJFCJMGI_36 (original name was: gnl|Prokka|LJFCJMGI_36); gnlProkkaLJFCJMGI_37 (original name was: gnl|Prokka|LJFCJMGI_37); gnlProkkaLJFCJMGI_38 (original name was: gnl|Prokka|LJFCJMGI_38); gnlProkkaLJFCJMGI_39 (original name was: gnl|Prokka|LJFCJMGI_39); gnlProkkaLJFCJMGI_40 (original name was: gnl|Prokka|LJFCJMGI_40); gnlProkkaLJFCJMGI_41 (original name was: gnl|Prokka|LJFCJMGI_41); gnlProkkaLJFCJMGI_42 (original name was: gnl|Prokka|LJFCJMGI_42); gnlProkkaLJFCJMGI_43 (original name was: gnl|Prokka|LJFCJMGI_43); gnlProkkaLJFCJMGI_44 (original name was: gnl|Prokka|LJFCJMGI_44); gnlProkkaLJFCJMGI_45 (original name was: gnl|Prokka|LJFCJMGI_45); gnlProkkaLJFCJMGI_46 (original name was: gnl|Prokka|LJFCJMGI_46); gnlProkkaLJFCJMGI_48 (original name was: gnl|Prokka|LJFCJMGI_48); gnlProkkaLJFCJMGI_49 (original name was: gnl|Prokka|LJFCJMGI_49); gnlProkkaLJFCJMGI_50 (original name was: gnl|Prokka|LJFCJMGI_50); gnlProkkaLJFCJMGI_51 (original name was: gnl|Prokka|LJFCJMGI_51); gnlProkkaLJFCJMGI_52 (original name was: gnl|Prokka|LJFCJMGI_52); gnlProkkaLJFCJMGI_53 (original name was: gnl|Prokka|LJFCJMGI_53); gnlProkkaLJFCJMGI_54 (original name was: gnl|Prokka|LJFCJMGI_54); gnlProkkaLJFCJMGI_55 (original name was: gnl|Prokka|LJFCJMGI_55); gnlProkkaLJFCJMGI_56 (original name was: gnl|Prokka|LJFCJMGI_56); gnlProkkaLJFCJMGI_57 (original name was: gnl|Prokka|LJFCJMGI_57); gnlProkkaLJFCJMGI_67 (original name was: gnl|Prokka|LJFCJMGI_67); gnlProkkaLJFCJMGI_74 (original name was: gnl|Prokka|LJFCJMGI_74)

Compact view

gnlProkkaLJFCJMGI_1 - Region 1 - ranthipeptide

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Location: 286,034 - 307,699 nt. (total: 21,666 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLJFCJMGI_47 - Region 1 - lassopeptide

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Location: 1 - 1,734 nt. (total: 1,734 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lasso peptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lasso peptide predictions

Lassopeptides - No core peptides found.

Lasso peptides

Core peptide predictions

No core peptides found.

gnlProkkaLJFCJMGI_73 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 19,252 nt. (total: 19,252 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.