GCA_027668995.1 - 7 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaHCIBMOPF_7 (original name was: gnl|Prokka|HCIBMOPF_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	ranthipeptide	68,518	90,137
Region 7.2	cyclic-lactone-autoinducer	100,227	110,495

gnlProkkaHCIBMOPF_13 (original name was: gnl|Prokka|HCIBMOPF_13)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	cyclic-lactone-autoinducer,RRE-containing	33,248	61,196

gnlProkkaHCIBMOPF_23 (original name was: gnl|Prokka|HCIBMOPF_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	cyclic-lactone-autoinducer	1	10,691

gnlProkkaHCIBMOPF_24 (original name was: gnl|Prokka|HCIBMOPF_24)

Region	Type	From	To	Most similar known cluster		Similarity
Region 24.1	RRE-containing	1	10,614

gnlProkkaHCIBMOPF_34 (original name was: gnl|Prokka|HCIBMOPF_34)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	RRE-containing	66,488	86,745
Region 34.2	RRE-containing	89,366	110,508

Region	Type	From	To	Similarity
Region 7.1	ranthipeptide	68,518	90,137
Region 7.2	cyclic-lactone-autoinducer	100,227	110,495
Region 13.1	cyclic-lactone-autoinducer,RRE-containing	33,248	61,196
Region 23.1	cyclic-lactone-autoinducer	1	10,691
Region 24.1	RRE-containing	1	10,614
Region 34.1	RRE-containing	66,488	86,745
Region 34.2	RRE-containing	89,366	110,508

No secondary metabolite regions were found in these records:: gnlProkkaHCIBMOPF_1 (original name was: gnl|Prokka|HCIBMOPF_1); gnlProkkaHCIBMOPF_2 (original name was: gnl|Prokka|HCIBMOPF_2); gnlProkkaHCIBMOPF_3 (original name was: gnl|Prokka|HCIBMOPF_3); gnlProkkaHCIBMOPF_4 (original name was: gnl|Prokka|HCIBMOPF_4); gnlProkkaHCIBMOPF_5 (original name was: gnl|Prokka|HCIBMOPF_5); gnlProkkaHCIBMOPF_6 (original name was: gnl|Prokka|HCIBMOPF_6); gnlProkkaHCIBMOPF_8 (original name was: gnl|Prokka|HCIBMOPF_8); gnlProkkaHCIBMOPF_9 (original name was: gnl|Prokka|HCIBMOPF_9); gnlProkkaHCIBMOPF_10 (original name was: gnl|Prokka|HCIBMOPF_10); gnlProkkaHCIBMOPF_11 (original name was: gnl|Prokka|HCIBMOPF_11); gnlProkkaHCIBMOPF_12 (original name was: gnl|Prokka|HCIBMOPF_12); gnlProkkaHCIBMOPF_14 (original name was: gnl|Prokka|HCIBMOPF_14); gnlProkkaHCIBMOPF_15 (original name was: gnl|Prokka|HCIBMOPF_15); gnlProkkaHCIBMOPF_16 (original name was: gnl|Prokka|HCIBMOPF_16); gnlProkkaHCIBMOPF_17 (original name was: gnl|Prokka|HCIBMOPF_17); gnlProkkaHCIBMOPF_18 (original name was: gnl|Prokka|HCIBMOPF_18); gnlProkkaHCIBMOPF_19 (original name was: gnl|Prokka|HCIBMOPF_19); gnlProkkaHCIBMOPF_20 (original name was: gnl|Prokka|HCIBMOPF_20); gnlProkkaHCIBMOPF_21 (original name was: gnl|Prokka|HCIBMOPF_21); gnlProkkaHCIBMOPF_22 (original name was: gnl|Prokka|HCIBMOPF_22); gnlProkkaHCIBMOPF_25 (original name was: gnl|Prokka|HCIBMOPF_25); gnlProkkaHCIBMOPF_26 (original name was: gnl|Prokka|HCIBMOPF_26); gnlProkkaHCIBMOPF_27 (original name was: gnl|Prokka|HCIBMOPF_27); gnlProkkaHCIBMOPF_28 (original name was: gnl|Prokka|HCIBMOPF_28); gnlProkkaHCIBMOPF_29 (original name was: gnl|Prokka|HCIBMOPF_29); gnlProkkaHCIBMOPF_30 (original name was: gnl|Prokka|HCIBMOPF_30); gnlProkkaHCIBMOPF_31 (original name was: gnl|Prokka|HCIBMOPF_31); gnlProkkaHCIBMOPF_32 (original name was: gnl|Prokka|HCIBMOPF_32); gnlProkkaHCIBMOPF_33 (original name was: gnl|Prokka|HCIBMOPF_33); gnlProkkaHCIBMOPF_35 (original name was: gnl|Prokka|HCIBMOPF_35); gnlProkkaHCIBMOPF_36 (original name was: gnl|Prokka|HCIBMOPF_36); gnlProkkaHCIBMOPF_37 (original name was: gnl|Prokka|HCIBMOPF_37); gnlProkkaHCIBMOPF_38 (original name was: gnl|Prokka|HCIBMOPF_38); gnlProkkaHCIBMOPF_39 (original name was: gnl|Prokka|HCIBMOPF_39); gnlProkkaHCIBMOPF_40 (original name was: gnl|Prokka|HCIBMOPF_40); gnlProkkaHCIBMOPF_41 (original name was: gnl|Prokka|HCIBMOPF_41); gnlProkkaHCIBMOPF_42 (original name was: gnl|Prokka|HCIBMOPF_42); gnlProkkaHCIBMOPF_43 (original name was: gnl|Prokka|HCIBMOPF_43); gnlProkkaHCIBMOPF_44 (original name was: gnl|Prokka|HCIBMOPF_44); gnlProkkaHCIBMOPF_45 (original name was: gnl|Prokka|HCIBMOPF_45); gnlProkkaHCIBMOPF_46 (original name was: gnl|Prokka|HCIBMOPF_46); gnlProkkaHCIBMOPF_56 (original name was: gnl|Prokka|HCIBMOPF_56); gnlProkkaHCIBMOPF_59 (original name was: gnl|Prokka|HCIBMOPF_59); gnlProkkaHCIBMOPF_60 (original name was: gnl|Prokka|HCIBMOPF_60); gnlProkkaHCIBMOPF_61 (original name was: gnl|Prokka|HCIBMOPF_61)

Compact view

gnlProkkaHCIBMOPF_7 - Region 1 - ranthipeptide

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Location: 68,518 - 90,137 nt. (total: 21,620 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHCIBMOPF_7 - Region 2 - cyclic-lactone-autoinducer

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Location: 100,227 - 110,495 nt. (total: 10,269 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHCIBMOPF_13 - Region 1 - RRE-containing,cyclic-lactone-autoinducer

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Location: 33,248 - 61,196 nt. (total: 27,949 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)
RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHCIBMOPF_23 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 10,691 nt. (total: 10,691 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHCIBMOPF_24 - Region 1 - RRE-containing

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Location: 1 - 10,614 nt. (total: 10,614 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHCIBMOPF_34 - Region 1 - RRE-containing

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Location: 66,488 - 86,745 nt. (total: 20,258 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHCIBMOPF_34 - Region 2 - RRE-containing

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Location: 89,366 - 110,508 nt. (total: 21,143 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.