GCA_027681845.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaOLPJLJPG_5 (original name was: gnl|Prokka|OLPJLJPG_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	CDPS	124,625	145,371

gnlProkkaOLPJLJPG_7 (original name was: gnl|Prokka|OLPJLJPG_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	ranthipeptide	67,802	89,358

gnlProkkaOLPJLJPG_40 (original name was: gnl|Prokka|OLPJLJPG_40)

Region	Type	From	To	Most similar known cluster		Similarity
Region 40.1	resorcinol	1	19,410

gnlProkkaOLPJLJPG_67 (original name was: gnl|Prokka|OLPJLJPG_67)

Region	Type	From	To	Most similar known cluster		Similarity
Region 67.1	terpene	4,596	26,314

gnlProkkaOLPJLJPG_87 (original name was: gnl|Prokka|OLPJLJPG_87)

Region	Type	From	To	Most similar known cluster		Similarity
Region 79.1	hydrogen-cyanide	76,635	89,871

Region	Type	From	To	Similarity
Region 5.1	CDPS	124,625	145,371
Region 7.1	ranthipeptide	67,802	89,358
Region 40.1	resorcinol	1	19,410
Region 67.1	terpene	4,596	26,314
Region 79.1	hydrogen-cyanide	76,635	89,871

No secondary metabolite regions were found in these records:: gnlProkkaOLPJLJPG_1 (original name was: gnl|Prokka|OLPJLJPG_1); gnlProkkaOLPJLJPG_2 (original name was: gnl|Prokka|OLPJLJPG_2); gnlProkkaOLPJLJPG_3 (original name was: gnl|Prokka|OLPJLJPG_3); gnlProkkaOLPJLJPG_4 (original name was: gnl|Prokka|OLPJLJPG_4); gnlProkkaOLPJLJPG_6 (original name was: gnl|Prokka|OLPJLJPG_6); gnlProkkaOLPJLJPG_8 (original name was: gnl|Prokka|OLPJLJPG_8); gnlProkkaOLPJLJPG_9 (original name was: gnl|Prokka|OLPJLJPG_9); gnlProkkaOLPJLJPG_10 (original name was: gnl|Prokka|OLPJLJPG_10); gnlProkkaOLPJLJPG_11 (original name was: gnl|Prokka|OLPJLJPG_11); gnlProkkaOLPJLJPG_12 (original name was: gnl|Prokka|OLPJLJPG_12); gnlProkkaOLPJLJPG_13 (original name was: gnl|Prokka|OLPJLJPG_13); gnlProkkaOLPJLJPG_14 (original name was: gnl|Prokka|OLPJLJPG_14); gnlProkkaOLPJLJPG_15 (original name was: gnl|Prokka|OLPJLJPG_15); gnlProkkaOLPJLJPG_16 (original name was: gnl|Prokka|OLPJLJPG_16); gnlProkkaOLPJLJPG_17 (original name was: gnl|Prokka|OLPJLJPG_17); gnlProkkaOLPJLJPG_18 (original name was: gnl|Prokka|OLPJLJPG_18); gnlProkkaOLPJLJPG_19 (original name was: gnl|Prokka|OLPJLJPG_19); gnlProkkaOLPJLJPG_20 (original name was: gnl|Prokka|OLPJLJPG_20); gnlProkkaOLPJLJPG_21 (original name was: gnl|Prokka|OLPJLJPG_21); gnlProkkaOLPJLJPG_22 (original name was: gnl|Prokka|OLPJLJPG_22); gnlProkkaOLPJLJPG_23 (original name was: gnl|Prokka|OLPJLJPG_23); gnlProkkaOLPJLJPG_24 (original name was: gnl|Prokka|OLPJLJPG_24); gnlProkkaOLPJLJPG_25 (original name was: gnl|Prokka|OLPJLJPG_25); gnlProkkaOLPJLJPG_26 (original name was: gnl|Prokka|OLPJLJPG_26); gnlProkkaOLPJLJPG_27 (original name was: gnl|Prokka|OLPJLJPG_27); gnlProkkaOLPJLJPG_28 (original name was: gnl|Prokka|OLPJLJPG_28); gnlProkkaOLPJLJPG_29 (original name was: gnl|Prokka|OLPJLJPG_29); gnlProkkaOLPJLJPG_30 (original name was: gnl|Prokka|OLPJLJPG_30); gnlProkkaOLPJLJPG_31 (original name was: gnl|Prokka|OLPJLJPG_31); gnlProkkaOLPJLJPG_32 (original name was: gnl|Prokka|OLPJLJPG_32); gnlProkkaOLPJLJPG_33 (original name was: gnl|Prokka|OLPJLJPG_33); gnlProkkaOLPJLJPG_34 (original name was: gnl|Prokka|OLPJLJPG_34); gnlProkkaOLPJLJPG_35 (original name was: gnl|Prokka|OLPJLJPG_35); gnlProkkaOLPJLJPG_36 (original name was: gnl|Prokka|OLPJLJPG_36); gnlProkkaOLPJLJPG_37 (original name was: gnl|Prokka|OLPJLJPG_37); gnlProkkaOLPJLJPG_38 (original name was: gnl|Prokka|OLPJLJPG_38); gnlProkkaOLPJLJPG_39 (original name was: gnl|Prokka|OLPJLJPG_39); gnlProkkaOLPJLJPG_41 (original name was: gnl|Prokka|OLPJLJPG_41); gnlProkkaOLPJLJPG_42 (original name was: gnl|Prokka|OLPJLJPG_42); gnlProkkaOLPJLJPG_43 (original name was: gnl|Prokka|OLPJLJPG_43); gnlProkkaOLPJLJPG_44 (original name was: gnl|Prokka|OLPJLJPG_44); gnlProkkaOLPJLJPG_45 (original name was: gnl|Prokka|OLPJLJPG_45); gnlProkkaOLPJLJPG_46 (original name was: gnl|Prokka|OLPJLJPG_46); gnlProkkaOLPJLJPG_47 (original name was: gnl|Prokka|OLPJLJPG_47); gnlProkkaOLPJLJPG_48 (original name was: gnl|Prokka|OLPJLJPG_48); gnlProkkaOLPJLJPG_49 (original name was: gnl|Prokka|OLPJLJPG_49); gnlProkkaOLPJLJPG_50 (original name was: gnl|Prokka|OLPJLJPG_50); gnlProkkaOLPJLJPG_51 (original name was: gnl|Prokka|OLPJLJPG_51); gnlProkkaOLPJLJPG_52 (original name was: gnl|Prokka|OLPJLJPG_52); gnlProkkaOLPJLJPG_53 (original name was: gnl|Prokka|OLPJLJPG_53); gnlProkkaOLPJLJPG_54 (original name was: gnl|Prokka|OLPJLJPG_54); gnlProkkaOLPJLJPG_55 (original name was: gnl|Prokka|OLPJLJPG_55); gnlProkkaOLPJLJPG_56 (original name was: gnl|Prokka|OLPJLJPG_56); gnlProkkaOLPJLJPG_57 (original name was: gnl|Prokka|OLPJLJPG_57); gnlProkkaOLPJLJPG_58 (original name was: gnl|Prokka|OLPJLJPG_58); gnlProkkaOLPJLJPG_59 (original name was: gnl|Prokka|OLPJLJPG_59); gnlProkkaOLPJLJPG_60 (original name was: gnl|Prokka|OLPJLJPG_60); gnlProkkaOLPJLJPG_61 (original name was: gnl|Prokka|OLPJLJPG_61); gnlProkkaOLPJLJPG_62 (original name was: gnl|Prokka|OLPJLJPG_62); gnlProkkaOLPJLJPG_63 (original name was: gnl|Prokka|OLPJLJPG_63); gnlProkkaOLPJLJPG_64 (original name was: gnl|Prokka|OLPJLJPG_64); gnlProkkaOLPJLJPG_65 (original name was: gnl|Prokka|OLPJLJPG_65); gnlProkkaOLPJLJPG_66 (original name was: gnl|Prokka|OLPJLJPG_66); gnlProkkaOLPJLJPG_68 (original name was: gnl|Prokka|OLPJLJPG_68); gnlProkkaOLPJLJPG_69 (original name was: gnl|Prokka|OLPJLJPG_69); gnlProkkaOLPJLJPG_70 (original name was: gnl|Prokka|OLPJLJPG_70); gnlProkkaOLPJLJPG_71 (original name was: gnl|Prokka|OLPJLJPG_71); gnlProkkaOLPJLJPG_72 (original name was: gnl|Prokka|OLPJLJPG_72); gnlProkkaOLPJLJPG_73 (original name was: gnl|Prokka|OLPJLJPG_73); gnlProkkaOLPJLJPG_74 (original name was: gnl|Prokka|OLPJLJPG_74); gnlProkkaOLPJLJPG_75 (original name was: gnl|Prokka|OLPJLJPG_75); gnlProkkaOLPJLJPG_76 (original name was: gnl|Prokka|OLPJLJPG_76); gnlProkkaOLPJLJPG_77 (original name was: gnl|Prokka|OLPJLJPG_77); gnlProkkaOLPJLJPG_78 (original name was: gnl|Prokka|OLPJLJPG_78)

Compact view

gnlProkkaOLPJLJPG_5 - Region 1 - CDPS

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Location: 124,625 - 145,371 nt. (total: 20,747 nt) Show pHMM detection rules used

CDPS: (CDPS or cycdipepsynth)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOLPJLJPG_7 - Region 1 - ranthipeptide

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Location: 67,802 - 89,358 nt. (total: 21,557 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOLPJLJPG_40 - Region 1 - resorcinol

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Location: 1 - 19,410 nt. (total: 19,410 nt) Show pHMM detection rules used

Region on contig edge.

resorcinol: DarB

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOLPJLJPG_67 - Region 1 - terpene

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Location: 4,596 - 26,314 nt. (total: 21,719 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOLPJLJPG_87 - Region 1 - hydrogen-cyanide

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Location: 76,635 - 89,871 nt. (total: 13,237 nt) Show pHMM detection rules used

hydrogen-cyanide: (Fer2_4 and cds(Pyr_redox_2 and Fer2_BFD) and DAO)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.