Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_027857655.1	Lacticaseibacillus rhamnosus	lbd85-1	SAMN32612941	2013/2015	Georgia	-	0	0	0	2	2.00
2	GCA_027857695.1	Lacticaseibacillus rhamnosus	lbr152	SAMN32612938	2013/2015	Georgia	-	0	0	0	2	2.00
3	GCA_027857735.1	Lacticaseibacillus rhamnosus	lbr108	SAMN32612936	2013/2015	Georgia	-	0	0	0	2	2.00
4	GCA_027857795.1	Lacticaseibacillus rhamnosus	lbr136	SAMN32612937	2013/2015	Georgia	-	0	0	0	2	2.00
5	GCA_027857665.1	Lacticaseibacillus rhamnosus	lbd330	SAMN32612940	2013/2015	Georgia	-	1	0	0	2	2.00
6	GCA_027857715.1	Lacticaseibacillus rhamnosus	lbr105	SAMN32612935	2013/2015	Georgia	-	1	0	0	2	2.00
7	GCA_027857765.1	Lacticaseibacillus rhamnosus	lbr154	SAMN32612939	2013/2015	Georgia	-	2	0	0	2	2.00
8	GCA_032465875.1	Lacticaseibacillus rhamnosus	LMG 23551	SAMN37405147	1990	United Kingdom	-	33	0	0	1	1.00
9	GCA_032465935.1	Lacticaseibacillus rhamnosus	LMG 19717	SAMN37405144	1999	Denmark	-	39	0	0	1	1.00
10	GCA_036595865.1	Lacticaseibacillus rhamnosus	SD4	SAMN31309353	2011	Thailand	Homo sapiens	42	0	0	2	2.00
11	GCA_028322835.1	Lacticaseibacillus rhamnosus	2217st1_F11_2217SCRN_200827	SAMN31322661	2020-08-27	USA	Homo sapiens	48	0	0	2	2.00
12	GCA_000801045.1	Lacticaseibacillus rhamnosus	116	SAMN03154065	1994	Russia	Homo sapiens	52	0	0	2	2.00
13	GCA_001656765.1	Lacticaseibacillus rhamnosus	Lrh34	SAMN03196621	-	-	-	60	0	0	2	2.00
14	GCA_008017355.1	Lacticaseibacillus rhamnosus	Vahe	SAMN12558187	-	-	Homo sapiens	63	0	0	2	2.00
15	GCA_001656735.1	Lacticaseibacillus rhamnosus	Lrh11	SAMN03196637	-	-	Homo sapiens	76	0	0	2	2.00
16	GCA_030217425.1	Lacticaseibacillus rhamnosus	UMB1351A	SAMN34996519	-	USA: Maywood, IL	Homo sapiens	77	0	0	2	2.00
17	GCA_030224725.1	Lacticaseibacillus rhamnosus	UMB1351B	SAMN34998765	-	USA: Maywood, IL	Homo sapiens	77	0	0	2	2.00
18	GCA_002848015.1	Lacticaseibacillus rhamnosus	UMB0004	SAMN08193701	2015	USA: Maywood, IL	Homo sapiens	79	0	0	2	2.00
19	GCA_028322725.1	Lacticaseibacillus rhamnosus	1001095st1_F3_1001254B_151014	SAMN31322651	2015-10-14	USA	Homo sapiens	84	0	0	2	2.00
20	GCA_028322785.1	Lacticaseibacillus rhamnosus	1001095st1_F6_1001095A_150126	SAMN31322652	2015-01-26	USA	Homo sapiens	85	0	0	2	2.00
21	GCA_032465895.1	Lacticaseibacillus rhamnosus	LMG 23327	SAMN37405146	2005	-	-	85	0	0	1	1.00
22	GCA_043589385.1	Lacticaseibacillus rhamnosus	WHH1155	SAMN14073955	2013	China: Inner Mongolia	-	85	0	0	1	1.00
23	GCA_028321085.1	Lacticaseibacillus rhamnosus	1001095st1_C6_1001095A_150126	SAMN31322649	2015-01-26	USA	Homo sapiens	95	0	0	2	2.00
24	GCA_002286235.1	Lacticaseibacillus rhamnosus	LR5	SAMN05631078	2015-08-24	South Korea: Seoul	Homo sapiens	97	0	0	1	1.00
25	GCA_018458775.1	Lacticaseibacillus rhamnosus	RAB2019A	SAMN18473070	-	USA: St. Louis	Homo sapiens	98	1	0	2	2.24
26	GCA_022509255.1	Lacticaseibacillus rhamnosus	QAULRN2	SAMN20114179	2018-01-01/2021-01-01	Pakistan: Islamabad	-	98	1	0	2	2.24
27	GCA_001656685.1	Lacticaseibacillus rhamnosus	Lrh19	SAMN03196650	-	-	Homo sapiens	99	0	0	2	2.00
28	GCA_028322705.1	Lacticaseibacillus rhamnosus	1001095st1_F3_1001095A_150126	SAMN31322650	2015-01-26	USA	Homo sapiens	99	0	0	2	2.00
29	GCA_036595825.1	Lacticaseibacillus rhamnosus	SD11	SAMN31309354	2011	Thailand	Homo sapiens	99	0	0	2	2.00
30	GCA_028321835.1	Lacticaseibacillus rhamnosus	1001095st1_A7_1001095A_150126	SAMN31322648	2015-01-26	USA	Homo sapiens	114	0	0	2	2.00
31	GCA_003046115.1	Lacticaseibacillus rhamnosus	LR2	SAMN08801722	2017	Turkey	-	118	0	0	2	2.00
32	GCA_001657195.1	Lacticaseibacillus rhamnosus	Lrh33	SAMN03196620	-	-	-	131	0	0	2	2.00
33	GCA_001982425.1	Lacticaseibacillus rhamnosus	AMC143	SAMN06161581	2010	USA	Homo sapiens	212	0	0	2	2.00
34	GCA_001044105.1	Lacticaseibacillus rhamnosus	Lr044	SAMN03196658	-	-	-	369	0	0	2	2.00
35	GCA_032465995.1	Lacticaseibacillus rhamnosus	LMG 10768	SAMN37405141	1988	Sweden	-	797	0	0	1	1.00
36	GCA_000418475.1	Lacticaseibacillus rhamnosus LOCK900	LOCK900	SAMN02603328	-	-	-	800	0	0	1	1.00
37	GCA_013167115.1	Lacticaseibacillus rhamnosus	LV108	SAMN14943671	2002-09-20	China	Homo sapiens	800	0	0	1	1.00
38	GCA_000235785.2	Lacticaseibacillus rhamnosus R0011	R0011	SAMN02469944	1976	Canada	-	801	0	0	2	2.00
39	GCA_000932035.1	Lacticaseibacillus rhamnosus	CLS17	SAMN03120606	2012-04-04	Kazakhstan: Astana	Homo sapiens	801	0	0	2	2.00
40	GCA_002238035.1	Lacticaseibacillus rhamnosus	IBL027	SAMN06676198	2013-04-16	Argentina: Tucuman	Homo sapiens	801	0	0	2	2.00
41	GCA_002406705.1	Lacticaseibacillus rhamnosus	B1	SAMN07665580	2016-11-07	Canada: Montreal, Quebec	-	801	0	0	2	2.00
42	GCA_003052925.1	Lacticaseibacillus rhamnosus	DS18_11	SAMN06464111	2016-11-05	USA:MD	Homo sapiens	801	0	0	2	2.00
43	GCA_003052985.1	Lacticaseibacillus rhamnosus	DS3_11	SAMN05864073	2016-04-20	USA:MD	Homo sapiens	801	0	0	2	2.00
44	GCA_003061625.1	Lacticaseibacillus rhamnosus	DS9_11	SAMN05864075	2016-01-31	USA:MD	Homo sapiens	801	0	0	2	2.00
45	GCA_003061665.1	Lacticaseibacillus rhamnosus	DS12_11	SAMN05864076	2015-11-19	USA:MD	Homo sapiens	801	0	0	2	2.00
46	GCA_003573615.1	Lacticaseibacillus rhamnosus	ARJD	SAMN08793894	2016	India: Kolhapur	-	801	0	0	2	2.00
47	GCA_013342125.1	Lacticaseibacillus rhamnosus	OSU-PECh-69	SAMN14987738	-	-	-	801	0	0	2	2.00
48	GCA_014212185.1	Lacticaseibacillus rhamnosus	CBC-LR1	SAMN15749032	2001	Bulgaria	-	801	0	0	2	2.00
49	GCA_016599675.2	Lacticaseibacillus rhamnosus	B6	SAMN17141195	2015-02-01	Bulgaria	-	801	0	0	1	1.00
50	GCA_025189545.1	Lacticaseibacillus rhamnosus	CIRM-BIA 910	SAMN10365506	1987	Egypt	-	801	0	0	2	2.00
51	GCA_038039235.1	Lacticaseibacillus rhamnosus	ICIS25	SAMN40744994	2020-08-07	Russia: Orenburg region, Orenburg district, Nizhnyaya Pavlovka village	-	801	0	0	2	2.00
52	GCA_039857935.1	Lacticaseibacillus rhamnosus	TCI366	SAMN41415636	2019-06-11	Taiwan: Taipei	Homo sapiens	801	0	0	1	1.00
53	GCA_001831235.1	Lacticaseibacillus rhamnosus	ASCC 3029	SAMN05915695	1997	-	-	802	0	0	2	2.00
54	GCA_025189305.1	Lacticaseibacillus rhamnosus	CIRM-BIA 784	SAMN10365516	1999	France	-	802	0	0	2	2.00
55	GCA_025189365.1	Lacticaseibacillus rhamnosus	CIRM-BIA 930	SAMN10365514	2001	France	-	802	0	0	2	2.00
56	GCA_025189405.1	Lacticaseibacillus rhamnosus	CIRM-BIA 774	SAMN10365513	1964	France	-	802	0	0	2	2.00
57	GCA_001657165.1	Lacticaseibacillus rhamnosus	Lrh10	SAMN03196618	-	-	-	803	0	0	2	2.00
58	GCA_002076955.1	Lacticaseibacillus rhamnosus	Pen	SAMN06196449	2005	Poland	Homo sapiens	803	0	0	1	1.00
59	GCA_025189385.1	Lacticaseibacillus rhamnosus	CIRM-BIA 1112	SAMN10365515	2001	France	-	803	0	0	2	2.00
60	GCA_000235865.1	Lacticaseibacillus rhamnosus ATCC 21052	ATCC 21052	SAMN02299451	-	-	Homo sapiens	804	0	0	2	2.00
61	GCA_025189265.1	Lacticaseibacillus rhamnosus	CIRM-BIA 1107	SAMN10365520	1978	France	-	804	0	0	2	2.00
62	GCA_018966895.1	Lacticaseibacillus rhamnosus	F	SAMN19670540	2010-12-22	Russia: Moscow	Homo sapiens	805	0	0	2	2.00
63	GCA_001656675.1	Lacticaseibacillus rhamnosus	Lrh20	SAMN03196645	-	-	Homo sapiens	809	0	0	2	2.00
64	GCA_001656895.1	Lacticaseibacillus rhamnosus	Lrh30	SAMN03196639	-	-	Homo sapiens	811	0	0	2	2.00
65	GCA_001656635.1	Lacticaseibacillus rhamnosus	Lrh23	SAMN03196649	-	-	Homo sapiens	812	0	0	2	2.00
66	GCA_032465975.1	Lacticaseibacillus rhamnosus	LMG 23550	SAMN37405142	1990	United Kingdom	-	814	0	0	1	1.00
67	GCA_044990685.1	Lacticaseibacillus rhamnosus	FNCPS 477	SAMN44657155	1980-12-09	Russia: Altai Krai, Rubtsovsk	-	814	0	0	2	2.00
68	GCA_000699985.1	Lacticaseibacillus rhamnosus 51B	51B	SAMN02776192	2009-03	Russia: Central Russia	Homo sapiens	816	0	0	2	2.00
69	GCA_002762445.1	Lacticaseibacillus rhamnosus	GR-1	SAMN07981099	2017-05	India: Pune	-	816	0	0	2	2.00
70	GCA_003061565.1	Lacticaseibacillus rhamnosus	DS17_11	SAMN06464110	2016-10-07	USA:MD	Homo sapiens	816	0	0	2	2.00
71	GCA_003061605.1	Lacticaseibacillus rhamnosus	DS22_11	SAMN06464112	2016-12-16	USA:MD	Homo sapiens	816	0	0	2	2.00
72	GCA_013425725.1	Lacticaseibacillus rhamnosus	AMC0712	SAMN15514048	2016/2018	-	Homo sapiens	816	0	0	2	2.00
73	GCA_019990845.1	Lacticaseibacillus rhamnosus	cek-R1	SAMN21367937	2021-03-23	Hungary: Dinnyes	beet	816	0	0	2	2.00
74	GCA_020826335.1	Lacticaseibacillus rhamnosus	PMC203	SAMN22826457	2020-01-01	South Korea: Cheonan	Homo sapiens	816	0	0	1	1.00
75	GCA_024053515.2	Lacticaseibacillus rhamnosus	DM065	SAMN29255128	2022-02-07	South Korea	Homo sapiens	816	0	0	1	1.00
76	GCA_024442295.1	Lacticaseibacillus rhamnosus	CLK 101	SAMN29784175	2022-01-17T10:30:00Z	China:Kunming	-	816	0	0	1	1.00
77	GCA_024665595.1	Lacticaseibacillus rhamnosus	GR-1	SAMN29862203	-	-	Homo sapiens	816	0	0	1	1.00
78	GCA_030490305.1	Lacticaseibacillus rhamnosus	DM163	SAMN36399042	2022-10-07	South Korea	Homo sapiens	816	0	0	1	1.00
79	GCA_040705095.1	Lacticaseibacillus rhamnosus	PM4	SAMN42384222	2021	Cameroon	Homo sapiens	816	0	0	2	2.00
80	GCA_041167785.1	Lacticaseibacillus rhamnosus	YGRT01	SAMN43028782	2024-07-12	South Korea	-	816	0	0	1	1.00
81	GCA_000160175.1	Lacticaseibacillus rhamnosus LMS2-1	LMS2-1	SAMN00001479	-	-	Homo sapiens	817	0	0	2	2.00
82	GCA_001656975.1	Lacticaseibacillus rhamnosus	Lrh25	SAMN03196619	-	-	-	817	0	0	2	2.00
83	GCA_009679335.1	Lacticaseibacillus rhamnosus	BIOML-A4	SAMN11946121	2014-07-04	USA:Boston	Homo sapiens	817	0	0	2	2.00
84	GCA_009679395.1	Lacticaseibacillus rhamnosus	BIOML-A3	SAMN11946120	2014-07-04	USA:Boston	Homo sapiens	817	1	0	2	2.24
85	GCA_013425545.1	Lacticaseibacillus rhamnosus	AMC0709	SAMN15514057	2016/2018	-	Homo sapiens	817	0	0	2	2.00
86	GCA_013425555.1	Lacticaseibacillus rhamnosus	AMC0713	SAMN15514055	2016/2018	-	Homo sapiens	817	0	0	2	2.00
87	GCA_013425565.1	Lacticaseibacillus rhamnosus	AMC0707	SAMN15514056	2016/2018	-	Homo sapiens	817	0	0	2	2.00
88	GCA_013425605.1	Lacticaseibacillus rhamnosus	AMC0720	SAMN15514053	2016/2018	-	Homo sapiens	817	0	0	2	2.00
89	GCA_013425615.1	Lacticaseibacillus rhamnosus	AMC0710	SAMN15514054	2016/2018	-	Homo sapiens	817	0	0	2	2.00
90	GCA_013425655.1	Lacticaseibacillus rhamnosus	AMC0714	SAMN15514051	2016/2018	-	Homo sapiens	817	0	0	2	2.00
91	GCA_013425665.1	Lacticaseibacillus rhamnosus	AMC0722	SAMN15514050	2016/2018	-	Homo sapiens	817	0	0	2	2.00
92	GCA_013425775.1	Lacticaseibacillus rhamnosus	AMC0706	SAMN15514047	2016/2018	-	Homo sapiens	817	0	0	2	2.00
93	GCA_029269765.1	Lacticaseibacillus rhamnosus	ERKN4	SAMN33714532	2022-08-01	Turkey:Ankara	-	817	0	0	2	2.00
94	GCA_030286545.1	Lacticaseibacillus rhamnosus	ISO20	SAMN35721675	2017-04-25	South Africa: Agricultural Research Council-Animal Production, Pretoria, Irene	Saanen goat	817	0	0	2	2.00
95	GCA_031626835.1	Lacticaseibacillus rhamnosus	FUA3185	SAMN29421123	2009	Italy	-	817	0	0	2	2.00
96	GCA_032465915.1	Lacticaseibacillus rhamnosus	LMG 23277	SAMN37405145	1993	Belgium	-	817	0	0	1	1.00
97	GCA_041228125.1	Lacticaseibacillus rhamnosus	NS2301G1	SAMN43023992	2023-10-30	South Korea: Gwangju	-	817	0	0	1	1.00
98	GCA_000026525.1	Lacticaseibacillus rhamnosus Lc 705	Lc 705	SAMEA2272728	-	-	-	818	0	0	1	1.00
99	GCA_001005625.1	Lacticaseibacillus rhamnosus	CNCM-I-3698	SAMN03465328	1997-01-01	France	Capra hircus	818	0	0	2	2.00
100	GCA_001656605.1	Lacticaseibacillus rhamnosus	Lrh26	SAMN03196629	-	-	Homo sapiens	818	0	0	2	2.00