Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_027947315.1	Streptococcus thermophilus	TSGB 4239	SAMN32339318	2020-07	Turkey	-	0	0	26	32	41.23
2	GCA_036784745.1	Streptococcus thermophilus	TSGB4237	SAMN37641162	2020-07	Turkey	-	1	0	26	28	38.21
3	GCA_027947325.1	Streptococcus thermophilus	TSGB 4232	SAMN32339315	2020-07	Turkey	-	42	0	25	32	40.61
4	GCA_027947295.1	Streptococcus thermophilus	TSGB 4236	SAMN32339317	2020-07	Turkey	-	120	0	21	32	38.28
5	GCA_027947395.1	Streptococcus thermophilus	TSGB 4230	SAMN32339313	2020-07	Turkey	-	677	0	32	31	44.55
6	GCA_027947245.1	Streptococcus thermophilus	TSGB 4251	SAMN32339323	2020-07	Turkey	-	686	0	23	33	40.22
7	GCA_028463905.1	Streptococcus thermophilus	strain TSGB 4141	SAMN32902037	2020-07	Turkey	-	686	0	23	29	37.01
8	GCA_027947375.1	Streptococcus thermophilus	TSGB 4231	SAMN32339314	2020-07	Turkey	-	687	0	23	33	40.22
9	GCA_025739385.1	Streptococcus thermophilus	4067	SAMN16933230	1996	Ireland	-	699	0	22	28	35.61
10	GCA_025187705.1	Streptococcus thermophilus	CIRM-BIA 1125	SAMN10365625	1987	Greece	-	715	0	23	32	39.41
11	GCA_903891205.1	Streptococcus thermophilus	-	SAMEA6957283	1987	Greece	-	715	0	23	28	36.24
12	GCA_021229135.1	Streptococcus thermophilus	8253 (205)	SAMN23827835	2001	Bulgaria: Balkan Mountains	-	719	0	24	33	40.80
13	GCA_039783105.1	Streptococcus thermophilus	90729	SAMN16933234	1995	Ireland	-	721	0	22	30	37.20
14	GCA_025122495.1	Streptococcus thermophilus	CIRM-BIA 1131	SAMN10365212	1987	Greece	-	723	0	24	33	40.80
15	GCA_027947215.1	Streptococcus thermophilus	TSGB 4235	SAMN32339325	2020-07	Turkey	-	723	0	25	32	40.61
16	GCA_025132955.1	Streptococcus thermophilus	1047	SAMN10365132	2007	Kenya	-	726	0	26	33	42.01
17	GCA_025186725.1	Streptococcus thermophilus	CIRM-BIA 1124	SAMN10365660	1978	France	-	726	0	26	33	42.01
18	GCA_025186785.1	Streptococcus thermophilus	CIRM-BIA 1050	SAMN10365657	1973	Greece	-	726	0	25	33	41.40
19	GCA_025186805.1	Streptococcus thermophilus	CIRM-BIA 1047	SAMN10365659	1978	France	-	726	0	26	33	42.01
20	GCA_025187145.1	Streptococcus thermophilus	CIRM-BIA 772	SAMN10365650	1973	France	-	726	0	22	32	38.83
21	GCA_025187545.1	Streptococcus thermophilus	CIRM-BIA 16	SAMN10365632	1954	France	-	726	0	37	33	49.58
22	GCA_025187565.1	Streptococcus thermophilus	CIRM-BIA 1057	SAMN10365631	1991	France	-	726	0	26	33	42.01
23	GCA_903884415.1	Streptococcus thermophilus	-	SAMEA6957285	1954	France	-	726	0	37	29	47.01
24	GCA_903886635.1	Streptococcus thermophilus	-	SAMEA6957298	1963	France	-	726	0	22	28	35.61
25	GCA_903890825.1	Streptococcus thermophilus	-	SAMEA6957274	1978	France	-	726	0	26	29	38.95
26	GCA_903890945.1	Streptococcus thermophilus	-	SAMEA6957277	1973	Greece	-	726	0	25	29	38.29
27	GCA_039783225.1	Streptococcus thermophilus	CNRZ760	SAMN16933237	1995	Ireland	-	727	0	22	30	37.20
28	GCA_040883385.1	Streptococcus thermophilus	AM-ST-89	SAMN42007031	-	-	-	727	0	25	34	42.20
29	GCA_020076015.1	Streptococcus thermophilus	CF13_14	SAMN15078605	2018-03-12	USA:MD	Homo sapiens	728	0	22	34	40.50
30	GCA_039781665.1	Streptococcus thermophilus	4052	SAMN16933229	1995	Ireland	-	728	0	26	29	38.95
31	GCA_045159855.1	Streptococcus thermophilus	MM8	SAMN16933250	2017	Ireland	-	728	0	26	28	38.21
32	GCA_025186565.1	Streptococcus thermophilus	CIRM-BIA 1049	SAMN10365665	1979	France	-	729	0	22	34	40.50
33	GCA_025186965.1	Streptococcus thermophilus	CIRM-BIA 23	SAMN10365655	1958	France	-	729	0	26	33	42.01
34	GCA_038049945.1	Streptococcus thermophilus	TCI125	SAMN40642328	2013-11	Taiwan:Taipei	-	729	0	26	29	38.95
35	GCA_903886195.1	Streptococcus thermophilus	-	SAMEA6957289	1955	France	-	729	0	26	29	38.95
36	GCA_903890925.1	Streptococcus thermophilus	-	SAMEA6957276	1978	France	-	729	0	22	30	37.20
37	GCA_013370965.1	Streptococcus thermophilus	CBC-S77	SAMN15249454	1977-05-02	Bulgaria: West Rhode Mountain	-	730	0	30	33	44.60
38	GCA_025186625.1	Streptococcus thermophilus	CIRM-BIA 1048	SAMN10365662	1978	Bulgaria	-	730	0	22	33	39.66
39	GCA_025187195.1	Streptococcus thermophilus	CIRM-BIA 1117	SAMN10365648	1973	France	-	730	0	21	32	38.28
40	GCA_903890905.1	Streptococcus thermophilus	-	SAMEA6957275	1978	Bulgaria	-	730	0	22	29	36.40
41	GCA_000011825.1	Streptococcus thermophilus LMG 18311	LMG 18311	SAMN02604079	-	-	-	731	0	37	29	47.01
42	GCA_025187235.1	Streptococcus thermophilus	CIRM-BIA 67	SAMN10365647	1971	France	-	731	0	21	32	38.28
43	GCA_039782795.1	Streptococcus thermophilus	90728	SAMN16933233	1995	Ireland	-	731	0	23	30	37.80
44	GCA_903960675.1	Streptococcus thermophilus	-	SAMEA6957297	1971	France	-	731	0	21	27	34.21
45	GCA_025187265.1	Streptococcus thermophilus	CIRM-BIA 65	SAMN10365646	1971	France	-	732	0	21	32	38.28
46	GCA_036923315.1	Streptococcus thermophilus	TCI633	SAMN39973063	2016-03-24	Taiwan	Homo sapiens	732	0	34	28	44.05
47	GCA_903886475.1	Streptococcus thermophilus	-	SAMEA6957296	1971	France	-	732	0	21	28	35.00
48	GCA_013307265.1	Streptococcus thermophilus	CS9	SAMN09536719	2014	China	-	733	0	26	30	39.70
49	GCA_025186555.1	Streptococcus thermophilus	CIRM-BIA 1122	SAMN10365664	1979	France	-	733	0	33	33	46.67
50	GCA_025186665.1	Streptococcus thermophilus	CIRM-BIA 1119	SAMN10365661	1978	Bulgaria	-	733	0	23	34	41.05
51	GCA_025186945.1	Streptococcus thermophilus	CIRM-BIA 1123	SAMN10365654	1975	France	-	733	0	34	33	47.38
52	GCA_025739325.1	Streptococcus thermophilus	CNRZ1151	SAMN16933238	1995	Ireland	-	733	0	37	29	47.01
53	GCA_039784805.1	Streptococcus thermophilus	AVA116	SAMN16933236	1996	Ireland	-	733	0	28	29	40.31
54	GCA_900094135.1	Streptococcus thermophilus	ACA-DC 2	SAMEA4355128	-	-	-	733	0	28	29	40.31
55	GCA_903891195.1	Streptococcus thermophilus	-	SAMEA6957282	1979	France	-	733	0	33	29	43.93
56	GCA_006539425.1	Streptococcus thermophilus	-	SAMD00097243	-	-	-	734	0	26	32	41.23
57	GCA_025187185.1	Streptococcus thermophilus	CIRM-BIA 1116	SAMN10365649	1973	France	-	734	0	34	33	47.38
58	GCA_027947275.1	Streptococcus thermophilus	TSGB 4240	SAMN32339319	2020-07	Turkey	-	734	0	17	34	38.01
59	GCA_029983065.1	Streptococcus thermophilus	FUA329	SAMN31530271	2020-05-27	China:Lianyungang	Homo sapiens	734	0	26	32	41.23
60	GCA_039783195.1	Streptococcus thermophilus	90730	SAMN16933235	1995	Ireland	-	734	0	34	29	44.69
61	GCA_903891105.1	Streptococcus thermophilus	-	SAMEA6957280	1963	France	-	734	0	34	29	44.69
62	GCA_001514435.1	Streptococcus thermophilus	S9	SAMN04384202	2013	China	-	735	0	34	29	44.69
63	GCA_020075875.1	Streptococcus thermophilus	CF1_14	SAMN06464116	2016-10-15	USA:MD	Homo sapiens	735	0	21	33	39.12
64	GCA_025187345.1	Streptococcus thermophilus	CIRM-BIA 30	SAMN10365642	1963	France	-	735	0	22	32	38.83
65	GCA_025187405.1	Streptococcus thermophilus	CIRM-BIA 29	SAMN10365639	1960	Netherlands	-	735	0	37	33	49.58
66	GCA_025187645.1	Streptococcus thermophilus	CIRM-BIA 1056	SAMN10365627	1990	Indonesia	-	735	0	21	32	38.28
67	GCA_039783475.1	Streptococcus thermophilus	AVA1121	SAMN16933246	1995	Ireland	-	735	0	25	26	36.07
68	GCA_039783785.1	Streptococcus thermophilus	CNRZ887	SAMN16933249	1995	Ireland	-	735	0	21	28	35.00
69	GCA_039784855.1	Streptococcus thermophilus	CNRZ1202	SAMN16933239	1995	Ireland	-	735	0	25	29	38.29
70	GCA_039784985.1	Streptococcus thermophilus	4147	SAMN16933253	1996	Ireland	-	735	0	34	29	44.69
71	GCA_041514265.1	Streptococcus thermophilus	S24735	SAMN18478710	2019	Switzerland	-	735	0	23	27	35.47
72	GCA_903886205.1	Streptococcus thermophilus	-	SAMEA6957290	1960	Netherlands	-	735	0	37	29	47.01
73	GCA_903886285.1	Streptococcus thermophilus	-	SAMEA6957291	1963	France	-	735	0	22	28	35.61
74	GCA_009741815.1	Streptococcus thermophilus	ST_AVK	SAMN13198391	-	-	-	736	0	34	32	46.69
75	GCA_019449915.1	Streptococcus thermophilus	Brie28	SAMN19136587	2020-11-09	Ireland	-	736	0	34	33	47.38
76	GCA_025187275.1	Streptococcus thermophilus	CIRM-BIA 36	SAMN10365645	1971	France	-	736	0	21	32	38.28
77	GCA_025187445.1	Streptococcus thermophilus	CIRM-BIA 1364	SAMN10365636	1995	France	-	736	0	34	33	47.38
78	GCA_035758325.1	Streptococcus thermophilus	SCB0351	SAMN39326816	2013-09-10	China:Guangdong	-	736	0	34	28	44.05
79	GCA_035818935.1	Streptococcus thermophilus	SIT-20.S	SAMN38454960	2017-06-23	China:Yunan	-	736	0	34	32	46.69
80	GCA_039784895.1	Streptococcus thermophilus	ST55	SAMN16933245	1995	Ireland	-	736	0	26	30	39.70
81	GCA_903886385.1	Streptococcus thermophilus	-	SAMEA6957294	1971	France	-	736	0	21	28	35.00
82	GCA_001685375.1	Streptococcus thermophilus	CS8	SAMN05281844	2015	China: Yunnan	-	737	0	34	27	43.42
83	GCA_025187015.1	Streptococcus thermophilus	CIRM-BIA 2101	SAMN10365652	1975	Germany	-	737	0	21	32	38.28
84	GCA_903891305.1	Streptococcus thermophilus	-	SAMEA6957288	1975	Germany	-	737	0	21	28	35.00
85	GCA_003402855.1	Streptococcus thermophilus	ST109	SAMN09715176	-	USA:ERRC at Wyndmoor, PA	-	739	0	25	29	38.29
86	GCA_002443035.1	Streptococcus thermophilus	B59671	SAMN07369158	-	USA:ERRC at Wyndmoor, PA	-	740	0	26	29	38.95
87	GCA_025127295.1	Streptococcus thermophilus	976	SAMN10365140	1981	Switzerland	-	740	0	25	33	41.40
88	GCA_041514355.1	Streptococcus thermophilus	S24724	SAMN18478703	2019	Switzerland	-	740	0	25	29	38.29
89	GCA_042187345.1	Streptococcus thermophilus	S24725	SAMN18490521	2019	Switzerland	-	740	0	25	33	41.40
90	GCA_041514275.1	Streptococcus thermophilus	S24734	SAMN18478709	2019	Switzerland	-	741	0	25	29	38.29
91	GCA_025186525.1	Streptococcus thermophilus	CIRM-BIA 1121	SAMN10365663	1978	France	-	743	0	27	32	41.87
92	GCA_903891135.1	Streptococcus thermophilus	-	SAMEA6957281	1978	France	-	743	0	27	28	38.90
93	GCA_025186885.1	Streptococcus thermophilus	CIRM-BIA 2102	SAMN10365656	1950	Finland	-	744	0	24	32	40.00
94	GCA_000011845.1	Streptococcus thermophilus CNRZ1066	CNRZ1066	SAMN02603344	-	-	-	745	0	34	28	44.05
95	GCA_025187585.1	Streptococcus thermophilus	CIRM-BIA 1860	SAMN10365630	1979	Austria	-	746	0	23	33	40.22
96	GCA_019449675.1	Streptococcus thermophilus	Vach57	SAMN19116181	2020-11-09	Ireland	-	747	0	23	33	40.22
97	GCA_000182875.1	Streptococcus thermophilus ND03	ND03	SAMN02603938	-	-	-	748	0	22	29	36.40
98	GCA_001266475.1	Streptococcus thermophilus	KLDS3.1012	SAMN03957073	2009-02-02	China: Inner Mongolia	-	748	0	22	29	36.40
99	GCA_002012365.1	Streptococcus thermophilus	APC151	SAMN06349996	2015-02-13	Ireland	fish	748	0	22	29	36.40
100	GCA_003129655.1	Streptococcus thermophilus	KU30	SAMN09099014	2009-10-01	China:Hebei	-	748	0	22	32	38.83