Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_028202055.1	Bifidobacterium bifidum	D31st1_E7_D31t1_170403	SAMN31321363	2017-04-03	USA	Homo sapiens	0	2	0	0	2.00
2	GCA_028202075.1	Bifidobacterium bifidum	D31st1_A3_D31t1_170403	SAMN31321361	2017-04-03	USA	Homo sapiens	0	2	0	0	2.00
3	GCA_028202095.1	Bifidobacterium bifidum	D31st1_B4_D31t1_170403	SAMN31321362	2017-04-03	USA	Homo sapiens	1	2	0	0	2.00
4	GCA_001405355.1	Bifidobacterium bifidum	2789STDY5608877	SAMEA3545285	2013	United Kingdom	Homo sapiens	948	2	0	0	2.00
5	GCA_003437175.1	Bifidobacterium bifidum	TF07-22	SAMN09736904	2013-08-01	China: Shenzhen	Homo sapiens	1003	4	0	0	4.00
6	GCA_028202855.1	Bifidobacterium bifidum	1001136st1_C1_1001136B_160425	SAMN31321326	2016-04-25	USA	Homo sapiens	1018	2	0	0	2.00
7	GCA_900112465.1	Bifidobacterium bifidum	Calf96	SAMN05216254	-	-	-	1025	2	0	0	2.00
8	GCA_028201895.1	Bifidobacterium bifidum	G6_h1001283B150217_200217	SAMN31321369	2020-02-17	USA	Homo sapiens	1026	2	0	0	2.00
9	GCA_028201955.1	Bifidobacterium bifidum	C7_h1001283B150217_200217	SAMN31321368	2020-02-17	USA	Homo sapiens	1026	2	0	0	2.00
10	GCA_028201965.1	Bifidobacterium bifidum	2226st1_E4_2226SCRN_200925	SAMN31321353	2020-09-25	USA	Homo sapiens	1026	2	0	0	2.00
11	GCA_028202035.1	Bifidobacterium bifidum	B1_h1001283B150217_200217	SAMN31321367	2020-02-17	USA	Homo sapiens	1026	2	0	0	2.00
12	GCA_028202125.1	Bifidobacterium bifidum	1001283st1_F2_1001283B150304_161114	SAMN31321343	2016-11-14	USA	Homo sapiens	1026	2	0	0	2.00
13	GCA_028202165.1	Bifidobacterium bifidum	1001283st1_F3_1001283B150210_160208	SAMN31321344	2016-02-08	USA	Homo sapiens	1026	2	0	0	2.00
14	GCA_028202215.1	Bifidobacterium bifidum	1001283st1_F5_1001283B150209_150212	SAMN31321345	2015-02-12	USA	Homo sapiens	1026	2	0	0	2.00
15	GCA_028202295.1	Bifidobacterium bifidum	1001283st1_C1_1001283B150225_161107	SAMN31321338	2016-11-07	USA	Homo sapiens	1026	2	0	0	2.00
16	GCA_028202335.1	Bifidobacterium bifidum	1001283st1_A1_1001285H_161024	SAMN31321336	2016-10-24	USA	Homo sapiens	1026	3	0	0	3.00
17	GCA_028202355.1	Bifidobacterium bifidum	1001283st1_E8_1001285I_161205	SAMN31321342	2016-12-05	USA	Homo sapiens	1026	3	0	0	3.00
18	GCA_028202365.1	Bifidobacterium bifidum	1001283st1_B11_1001285I_161205	SAMN31321337	2016-12-05	USA	Homo sapiens	1026	3	0	0	3.00
19	GCA_028202555.1	Bifidobacterium bifidum	B6_h1001283B150217_200217	SAMN31321373	2020-02-17	USA	Homo sapiens	1026	2	0	0	2.00
20	GCA_028202575.1	Bifidobacterium bifidum	1001283st1_E8_1001283B150210_160208	SAMN31321341	2016-02-08	USA	Homo sapiens	1026	2	0	0	2.00
21	GCA_028202605.1	Bifidobacterium bifidum	1001283st1_D6_1001283B150209_150212	SAMN31321340	2015-02-12	USA	Homo sapiens	1026	2	0	0	2.00
22	GCA_028202725.1	Bifidobacterium bifidum	1001283st1_C8_1001283B150304_161114	SAMN31321339	2016-11-14	USA	Homo sapiens	1026	2	0	0	2.00
23	GCA_028203615.1	Bifidobacterium bifidum	A12_h1001283B150217_200217	SAMN31321372	2020-02-17	USA	Homo sapiens	1026	2	0	0	2.00
24	GCA_028203735.1	Bifidobacterium bifidum	F6_h1001283B150217_200217	SAMN31321377	2020-02-17	USA	Homo sapiens	1026	2	0	0	2.00
25	GCA_028203745.1	Bifidobacterium bifidum	G8_h1001283B150217_200217	SAMN31321379	2020-02-17	USA	Homo sapiens	1026	2	0	0	2.00
26	GCA_028203815.1	Bifidobacterium bifidum	F5_h1001283B150217_200217	SAMN31321376	2020-02-17	USA	Homo sapiens	1026	2	0	0	2.00
27	GCA_028203895.1	Bifidobacterium bifidum	H2_h1001283B150217_200217	SAMN31321370	2020-02-17	USA	Homo sapiens	1026	2	0	0	2.00
28	GCA_039913365.1	Bifidobacterium bifidum	C1_h1001283B150217_200217	SAMN31321374	2020-02-17	USA	Homo sapiens	1026	3	0	1	3.16
29	GCA_001020325.1	Bifidobacterium bifidum	LMG 13200	SAMN03097405	-	-	Homo sapiens	1027	2	0	0	2.00
30	GCA_028202155.1	Bifidobacterium bifidum	1001283st1_G4_1001283B150217_161031	SAMN31321346	2016-10-31	USA	Homo sapiens	1027	2	0	0	2.00
31	GCA_028203705.1	Bifidobacterium bifidum	G10_h1001283B150217_200217	SAMN31321380	2020-02-17	USA	Homo sapiens	1027	2	0	0	2.00
32	GCA_028203775.1	Bifidobacterium bifidum	F11_h1001283B150217_200217	SAMN31321378	2020-02-17	USA	Homo sapiens	1027	2	0	0	2.00
33	GCA_028203795.1	Bifidobacterium bifidum	C4_h1001283B150217_200217	SAMN31321375	2020-02-17	USA	Homo sapiens	1027	2	0	0	2.00
34	GCA_039913355.1	Bifidobacterium bifidum	2226st1_G9_2226SCRN_200925	SAMN31321354	2020-09-25	USA	Homo sapiens	1027	2	0	0	2.00
35	GCA_049192095.1	Bifidobacterium bifidum	IATA005	SAMN45053941	2022	Spain:Valencia	Homo sapiens	1027	2	0	0	2.00
36	GCA_003468415.1	Bifidobacterium bifidum	AM36-1AC	SAMN09736479	2013-12-01	China: Shenzhen	Homo sapiens	1028	2	0	0	2.00
37	GCA_028201935.1	Bifidobacterium bifidum	1025st1_E4_1025SCRN_200924	SAMN31321351	2020-09-24	USA	Homo sapiens	1028	2	0	0	2.00
38	GCA_028202225.1	Bifidobacterium bifidum	1025st1_F12_1025SCRN_200924	SAMN31321352	2020-09-24	USA	Homo sapiens	1028	2	0	0	2.00
39	GCA_028202255.1	Bifidobacterium bifidum	1025st1_B5_1025SCRN_200924	SAMN31321348	2020-09-24	USA	Homo sapiens	1028	2	0	0	2.00
40	GCA_028202265.1	Bifidobacterium bifidum	1025st1_D2_1025SCRN_200924	SAMN31321350	2020-09-24	USA	Homo sapiens	1028	2	0	0	2.00
41	GCA_028202305.1	Bifidobacterium bifidum	1025st1_A12_1025SCRN_200924	SAMN31321347	2020-09-24	USA	Homo sapiens	1028	2	0	0	2.00
42	GCA_028203875.1	Bifidobacterium bifidum	H3_h1001283B150217_200217	SAMN31321371	2020-02-17	USA	Homo sapiens	1028	2	0	0	2.00
43	GCA_039913395.1	Bifidobacterium bifidum	1025st1_C5_1025SCRN_200924	SAMN31321349	2020-09-24	USA	Homo sapiens	1029	2	0	0	2.00
44	GCA_003437945.1	Bifidobacterium bifidum	TF05-1	SAMN09736871	2013-08-01	China: Shenzhen	Homo sapiens	1030	3	0	0	3.00
45	GCA_000741085.1	Bifidobacterium bifidum	LMG 11041	SAMN02673426	-	-	Homo sapiens	1032	2	0	0	2.00
46	GCA_001025135.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	-	SAMD00061040	-	-	-	1032	2	0	0	2.00
47	GCA_016307165.1	Bifidobacterium bifidum	UBBB-55	SAMN16793263	2008-03-17	India: Unique Biotech Limited, Hyderabad	Homo sapiens	1032	2	0	0	2.00
48	GCA_017814645.1	Bifidobacterium bifidum	BB-G90	SAMN18436315	2011-11	China: Neimenggu	Homo sapiens	1032	2	0	0	2.00
49	GCA_039913015.1	Bifidobacterium bifidum	RTP31036st1_A12_RTP31036_200814	SAMN31321415	2020-08-14	USA	Homo sapiens	1032	2	0	0	2.00
50	GCA_039913035.1	Bifidobacterium bifidum	RTP31036st1_G6_RTP31036_200814	SAMN31321416	2020-08-14	USA	Homo sapiens	1032	2	0	0	2.00
51	GCA_040094955.1	Bifidobacterium bifidum	CLA-AA-H198	SAMN40631356	2020-07-20	Germany:Aachen	Homo sapiens	1032	2	0	0	2.00
52	GCA_900637095.1	Bifidobacterium bifidum	NCTC13001	SAMEA4063017	-	-	-	1032	2	0	0	2.00
53	GCA_013867495.1	Bifidobacterium bifidum	s-1	SAMN15579835	2020-07-20	-	-	1033	2	0	0	2.00
54	GCA_028202015.1	Bifidobacterium bifidum	D52st1_E11_D52t1_170925	SAMN31321364	2017-09-25	USA	Homo sapiens	1033	2	0	0	2.00
55	GCA_028202395.1	Bifidobacterium bifidum	J1101312st1_E10_J1101312_190322	SAMN31321382	2019-03-22	USA	Homo sapiens	1033	2	0	0	2.00
56	GCA_028202415.1	Bifidobacterium bifidum	J1101312st1_C7_J1101312_190322	SAMN31321381	2019-03-22	USA	Homo sapiens	1033	2	0	0	2.00
57	GCA_028203675.1	Bifidobacterium bifidum	J1101312st1_H2_J1101312_190322	SAMN31321384	2019-03-22	USA	Homo sapiens	1033	2	0	0	2.00
58	GCA_028203695.1	Bifidobacterium bifidum	J1101312st1_E3_J1101312_190322	SAMN31321383	2019-03-22	USA	Homo sapiens	1033	2	0	0	2.00
59	GCA_000466525.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	ATCC 29521	SAMN02436821	-	-	Homo sapiens	1034	2	0	0	2.00
60	GCA_001020405.1	Bifidobacterium bifidum	IPLA 20015	SAMN03103719	-	-	Homo sapiens	1036	4	0	0	4.00
61	GCA_003466395.1	Bifidobacterium bifidum	TM06-10	SAMN09736987	2013-08-01	China: Shenzhen	Homo sapiens	1036	4	0	0	4.00
62	GCA_009078055.1	Bifidobacterium bifidum	BIOML-A11	SAMN11944601	2015-12-09	USA:Boston	Homo sapiens	1036	2	0	0	2.00
63	GCA_009078115.1	Bifidobacterium bifidum	BIOML-A10	SAMN11944600	2015-12-09	USA:Boston	Homo sapiens	1036	2	0	0	2.00
64	GCA_009159495.1	Bifidobacterium bifidum	BIOML-A24	SAMN11944614	2015-12-09	USA:Boston	Homo sapiens	1036	2	1	0	2.24
65	GCA_009159505.1	Bifidobacterium bifidum	BIOML-A20	SAMN11944610	2015-12-09	USA:Boston	Homo sapiens	1036	2	0	0	2.00
66	GCA_009159555.1	Bifidobacterium bifidum	BIOML-A19	SAMN11944609	2015-12-09	USA:Boston	Homo sapiens	1036	3	1	0	3.16
67	GCA_009160825.1	Bifidobacterium bifidum	BIOML-A25	SAMN11944615	2015-12-09	USA:Boston	Homo sapiens	1036	3	0	0	3.00
68	GCA_009160885.1	Bifidobacterium bifidum	BIOML-A14	SAMN11944604	2015-12-09	USA:Boston	Homo sapiens	1036	2	0	0	2.00
69	GCA_009160905.1	Bifidobacterium bifidum	BIOML-A12	SAMN11944602	2015-12-09	USA:Boston	Homo sapiens	1036	2	0	0	2.00
70	GCA_009160915.1	Bifidobacterium bifidum	BIOML-A15	SAMN11944605	2015-12-09	USA:Boston	Homo sapiens	1036	2	0	0	2.00
71	GCA_003466365.1	Bifidobacterium bifidum	TM06-5	SAMN09736996	2013-08-01	China: Shenzhen	Homo sapiens	1037	4	0	0	4.00
72	GCA_009159095.1	Bifidobacterium bifidum	BIOML-A21	SAMN11944611	2015-12-09	USA:Boston	Homo sapiens	1037	2	0	0	2.00
73	GCA_009160945.1	Bifidobacterium bifidum	BIOML-A13	SAMN11944603	2015-12-09	USA:Boston	Homo sapiens	1038	2	0	0	2.00
74	GCA_046763285.1	Bifidobacterium bifidum	LHP007	SAMN46218889	2021	United Kingdom: Norwich	Homo sapiens	1039	2	0	0	2.00
75	GCA_003466485.1	Bifidobacterium bifidum	TM05-15	SAMN09736979	2013-08-01	China: Shenzhen	Homo sapiens	1041	4	0	0	4.00
76	GCA_003472345.1	Bifidobacterium bifidum	AM12-10	SAMN09734784	2013-08-01	China: Shenzhen	Homo sapiens	1041	4	0	0	4.00
77	GCA_003473145.1	Bifidobacterium bifidum	AM12-9	SAMN09734792	2013-08-01	China: Shenzhen	Homo sapiens	1041	4	0	0	4.00
78	GCA_003437785.1	Bifidobacterium bifidum	TF05-39	SAMN09736884	2013-08-01	China: Shenzhen	Homo sapiens	1042	4	0	0	4.00
79	GCA_000155395.1	Bifidobacterium bifidum NCIMB 41171	NCIMB 41171	SAMN02463676	-	-	Homo sapiens	1043	3	0	0	3.00
80	GCA_002469385.1	Bifidobacterium bifidum	1 G1971	SAMN06759457	1977	Russia: Moscow	Homo sapiens	1043	1	0	0	1.00
81	GCA_003436575.1	Bifidobacterium bifidum	TM04-12	SAMN09736968	2013-08-01	China: Shenzhen	Homo sapiens	1043	3	0	0	3.00
82	GCA_009160775.1	Bifidobacterium bifidum	BIOML-A18	SAMN11944608	2015-12-09	USA:Boston	Homo sapiens	1044	2	0	0	2.00
83	GCA_048553655.1	Bifidobacterium bifidum	FN120	SAMN46427391	2022-02-10	China:Tongwei county, Gansu province	Homo sapiens	1045	3	0	0	3.00
84	GCA_000265095.1	Bifidobacterium bifidum BGN4	BGN4	SAMN02603486	-	South Korea	Homo sapiens	1046	2	0	0	2.00
85	GCA_017894325.1	Bifidobacterium bifidum	CNCM I-4319	SAMN15324980	2017-09	France	Homo sapiens	1046	2	0	0	2.00
86	GCA_025506295.1	Bifidobacterium bifidum	20	SAMN12565454	2019-04-01	United Kingdom	Homo sapiens	1046	2	0	0	2.00
87	GCA_002076105.1	Bifidobacterium bifidum	1887B	SAMN06621707	-	Italy	Homo sapiens	1047	2	0	0	2.00
88	GCA_009160845.1	Bifidobacterium bifidum	BIOML-A17	SAMN11944607	2015-12-09	USA:Boston	Homo sapiens	1047	2	0	0	2.00
89	GCA_016838705.1	Bifidobacterium bifidum	HN002	SAMN17735950	2017-06-08	South Korea: Jeongup	Homo sapiens	1047	2	0	0	2.00
90	GCA_000300215.1	Bifidobacterium bifidum IPLA 20015	IPLA 20015	SAMN02470078	-	-	Homo sapiens	1048	4	0	0	4.00
91	GCA_003436635.1	Bifidobacterium bifidum	TM02-17	SAMN09736965	2012-11-01	China: Shenzhen	Homo sapiens	1048	4	0	0	4.00
92	GCA_003436655.1	Bifidobacterium bifidum	TM02-15	SAMN09736964	2012-11-01	China: Shenzhen	Homo sapiens	1048	4	0	0	4.00
93	GCA_028202185.1	Bifidobacterium bifidum	BSD2780061688st1_D1_BSD2780061688b_171218	SAMN31321359	2017-12-18	USA	Homo sapiens	1048	3	0	0	3.00
94	GCA_028202425.1	Bifidobacterium bifidum	A4_hBSD2780061687b_210117	SAMN31321396	2021-01-17	USA	Homo sapiens	1048	3	0	0	3.00
95	GCA_039913155.1	Bifidobacterium bifidum	F6_hBSD2780061687b_210117	SAMN31321403	2021-01-17	USA	Homo sapiens	1048	3	0	0	3.00
96	GCA_009160865.1	Bifidobacterium bifidum	BIOML-A16	SAMN11944606	2015-12-09	USA:Boston	Homo sapiens	1049	2	0	0	2.00
97	GCA_028202455.1	Bifidobacterium bifidum	H2_hBSD2780061687b_210117	SAMN31321404	2021-01-17	USA	Homo sapiens	1049	3	0	0	3.00
98	GCA_028202515.1	Bifidobacterium bifidum	F11_hBSD2780061687b_210117	SAMN31321401	2021-01-17	USA	Homo sapiens	1049	3	0	0	3.00
99	GCA_028203515.1	Bifidobacterium bifidum	A2_hBSD2780061687b_210117	SAMN31321395	2021-01-17	USA	Homo sapiens	1049	3	0	0	3.00
100	GCA_039913235.1	Bifidobacterium bifidum	B7_hBSD2780061687b_210117	SAMN31321398	2021-01-17	USA	Homo sapiens	1049	3	0	0	3.00