Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_028202185.1	Bifidobacterium bifidum	BSD2780061688st1_D1_BSD2780061688b_171218	SAMN31321359	2017-12-18	USA	Homo sapiens	0	3	0	0	3.00
2	GCA_039913235.1	Bifidobacterium bifidum	B7_hBSD2780061687b_210117	SAMN31321398	2021-01-17	USA	Homo sapiens	10	3	0	0	3.00
3	GCA_039913155.1	Bifidobacterium bifidum	F6_hBSD2780061687b_210117	SAMN31321403	2021-01-17	USA	Homo sapiens	12	3	0	0	3.00
4	GCA_028202455.1	Bifidobacterium bifidum	H2_hBSD2780061687b_210117	SAMN31321404	2021-01-17	USA	Homo sapiens	13	3	0	0	3.00
5	GCA_028202425.1	Bifidobacterium bifidum	A4_hBSD2780061687b_210117	SAMN31321396	2021-01-17	USA	Homo sapiens	14	3	0	0	3.00
6	GCA_028202515.1	Bifidobacterium bifidum	F11_hBSD2780061687b_210117	SAMN31321401	2021-01-17	USA	Homo sapiens	16	3	0	0	3.00
7	GCA_028202115.1	Bifidobacterium bifidum	BSD2780061688st1_G1_BSD2780061688b_171218	SAMN31321360	2017-12-18	USA	Homo sapiens	18	3	0	0	3.00
8	GCA_028202435.1	Bifidobacterium bifidum	F3_hBSD2780061687b_210117	SAMN31321402	2021-01-17	USA	Homo sapiens	19	3	0	0	3.00
9	GCA_028202535.1	Bifidobacterium bifidum	E4_hBSD2780061687b_210117	SAMN31321400	2021-01-17	USA	Homo sapiens	20	3	0	0	3.00
10	GCA_028203515.1	Bifidobacterium bifidum	A2_hBSD2780061687b_210117	SAMN31321395	2021-01-17	USA	Homo sapiens	21	3	0	0	3.00
11	GCA_028203545.1	Bifidobacterium bifidum	B3_hBSD2780061687b_210117	SAMN31321397	2021-01-17	USA	Homo sapiens	46	3	0	0	3.00
12	GCA_028203645.1	Bifidobacterium bifidum	E2_hBSD2780061687b_210117	SAMN31321399	2021-01-17	USA	Homo sapiens	111	3	0	0	3.00
13	GCA_001020405.1	Bifidobacterium bifidum	IPLA 20015	SAMN03103719	-	-	Homo sapiens	915	4	0	0	4.00
14	GCA_000300215.1	Bifidobacterium bifidum IPLA 20015	IPLA 20015	SAMN02470078	-	-	Homo sapiens	969	4	0	0	4.00
15	GCA_028202855.1	Bifidobacterium bifidum	1001136st1_C1_1001136B_160425	SAMN31321326	2016-04-25	USA	Homo sapiens	1028	2	0	0	2.00
16	GCA_025506295.1	Bifidobacterium bifidum	20	SAMN12565454	2019-04-01	United Kingdom	Homo sapiens	1030	2	0	0	2.00
17	GCA_001025135.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	-	SAMD00061040	-	-	-	1033	2	0	0	2.00
18	GCA_013867495.1	Bifidobacterium bifidum	s-1	SAMN15579835	2020-07-20	-	-	1033	2	0	0	2.00
19	GCA_016307165.1	Bifidobacterium bifidum	UBBB-55	SAMN16793263	2008-03-17	India: Unique Biotech Limited, Hyderabad	Homo sapiens	1033	2	0	0	2.00
20	GCA_017814645.1	Bifidobacterium bifidum	BB-G90	SAMN18436315	2011-11	China: Neimenggu	Homo sapiens	1033	2	0	0	2.00
21	GCA_900637095.1	Bifidobacterium bifidum	NCTC13001	SAMEA4063017	-	-	-	1033	2	0	0	2.00
22	GCA_000741085.1	Bifidobacterium bifidum	LMG 11041	SAMN02673426	-	-	Homo sapiens	1034	2	0	0	2.00
23	GCA_028201935.1	Bifidobacterium bifidum	1025st1_E4_1025SCRN_200924	SAMN31321351	2020-09-24	USA	Homo sapiens	1035	2	0	0	2.00
24	GCA_028202225.1	Bifidobacterium bifidum	1025st1_F12_1025SCRN_200924	SAMN31321352	2020-09-24	USA	Homo sapiens	1035	2	0	0	2.00
25	GCA_028202255.1	Bifidobacterium bifidum	1025st1_B5_1025SCRN_200924	SAMN31321348	2020-09-24	USA	Homo sapiens	1035	2	0	0	2.00
26	GCA_028202265.1	Bifidobacterium bifidum	1025st1_D2_1025SCRN_200924	SAMN31321350	2020-09-24	USA	Homo sapiens	1035	2	0	0	2.00
27	GCA_028202305.1	Bifidobacterium bifidum	1025st1_A12_1025SCRN_200924	SAMN31321347	2020-09-24	USA	Homo sapiens	1035	2	0	0	2.00
28	GCA_039913395.1	Bifidobacterium bifidum	1025st1_C5_1025SCRN_200924	SAMN31321349	2020-09-24	USA	Homo sapiens	1035	2	0	0	2.00
29	GCA_000466525.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	ATCC 29521	SAMN02436821	-	-	Homo sapiens	1036	2	0	0	2.00
30	GCA_049204775.1	Bifidobacterium bifidum	IATA148	SAMN45053989	2022	Spain:Valencia	Homo sapiens	1039	2	0	0	2.00
31	GCA_028201965.1	Bifidobacterium bifidum	2226st1_E4_2226SCRN_200925	SAMN31321353	2020-09-25	USA	Homo sapiens	1041	2	0	0	2.00
32	GCA_001020325.1	Bifidobacterium bifidum	LMG 13200	SAMN03097405	-	-	Homo sapiens	1042	2	0	0	2.00
33	GCA_011029205.1	Bifidobacterium bifidum	VA07-1AN	SAMN14087237	2015-08	Thailand: Khon Kean	Homo sapiens	1042	4	0	0	4.00
34	GCA_039913355.1	Bifidobacterium bifidum	2226st1_G9_2226SCRN_200925	SAMN31321354	2020-09-25	USA	Homo sapiens	1042	2	0	0	2.00
35	GCA_040094955.1	Bifidobacterium bifidum	CLA-AA-H198	SAMN40631356	2020-07-20	Germany:Aachen	Homo sapiens	1043	2	0	0	2.00
36	GCA_003466365.1	Bifidobacterium bifidum	TM06-5	SAMN09736996	2013-08-01	China: Shenzhen	Homo sapiens	1044	4	0	0	4.00
37	GCA_003466395.1	Bifidobacterium bifidum	TM06-10	SAMN09736987	2013-08-01	China: Shenzhen	Homo sapiens	1044	4	0	0	4.00
38	GCA_000155395.1	Bifidobacterium bifidum NCIMB 41171	NCIMB 41171	SAMN02463676	-	-	Homo sapiens	1047	3	0	0	3.00
39	GCA_003465425.1	Bifidobacterium bifidum	AF11-25B	SAMN09734209	2013-10-01	China: Shenzhen	Homo sapiens	1048	4	0	0	4.00
40	GCA_003473145.1	Bifidobacterium bifidum	AM12-9	SAMN09734792	2013-08-01	China: Shenzhen	Homo sapiens	1048	4	0	0	4.00
41	GCA_028202055.1	Bifidobacterium bifidum	D31st1_E7_D31t1_170403	SAMN31321363	2017-04-03	USA	Homo sapiens	1048	2	0	0	2.00
42	GCA_028202075.1	Bifidobacterium bifidum	D31st1_A3_D31t1_170403	SAMN31321361	2017-04-03	USA	Homo sapiens	1048	2	0	0	2.00
43	GCA_028202095.1	Bifidobacterium bifidum	D31st1_B4_D31t1_170403	SAMN31321362	2017-04-03	USA	Homo sapiens	1048	2	0	0	2.00
44	GCA_039912995.1	Bifidobacterium bifidum	RTP21222st1_H10_RTP21222_200807	SAMN31321412	2020-08-07	USA	Homo sapiens	1048	2	0	0	2.00
45	GCA_002076105.1	Bifidobacterium bifidum	1887B	SAMN06621707	-	Italy	Homo sapiens	1049	2	0	0	2.00
46	GCA_003472345.1	Bifidobacterium bifidum	AM12-10	SAMN09734784	2013-08-01	China: Shenzhen	Homo sapiens	1049	4	0	0	4.00
47	GCA_028202015.1	Bifidobacterium bifidum	D52st1_E11_D52t1_170925	SAMN31321364	2017-09-25	USA	Homo sapiens	1049	2	0	0	2.00
48	GCA_028203495.1	Bifidobacterium bifidum	RTP21484st2_A9_RTP21484_190118	SAMN31321414	2019-01-18	USA	Homo sapiens	1049	2	0	0	2.00
49	GCA_028368265.1	Bifidobacterium bifidum	RTP21484st2_G9_RTP21484_190118	SAMN31321246	2019-01-18	USA	Homo sapiens	1049	2	0	0	2.00
50	GCA_039913075.1	Bifidobacterium bifidum	RTP21222st1_F4_RTP21222_200807	SAMN31321410	2020-08-07	USA	Homo sapiens	1049	2	0	0	2.00
51	GCA_049192095.1	Bifidobacterium bifidum	IATA005	SAMN45053941	2022	Spain:Valencia	Homo sapiens	1049	2	0	0	2.00
52	GCA_002469385.1	Bifidobacterium bifidum	1 G1971	SAMN06759457	1977	Russia: Moscow	Homo sapiens	1050	1	0	0	1.00
53	GCA_039913055.1	Bifidobacterium bifidum	RTP21222st1_F7_RTP21222_200807	SAMN31321411	2020-08-07	USA	Homo sapiens	1050	2	0	0	2.00
54	GCA_045635495.1	Bifidobacterium bifidum	CGMCC No.29545	SAMN44616490	2023-05-01	China:Hangzhou	Homo sapiens	1050	2	0	0	2.00
55	GCA_000165905.1	Bifidobacterium bifidum PRL2010	PRL2010	SAMN02603510	-	-	Homo sapiens	1051	2	0	0	2.00
56	GCA_001020355.1	Bifidobacterium bifidum	85B	SAMN03097398	-	-	Homo sapiens	1051	3	0	0	3.00
57	GCA_003437945.1	Bifidobacterium bifidum	TF05-1	SAMN09736871	2013-08-01	China: Shenzhen	Homo sapiens	1051	3	0	0	3.00
58	GCA_039913095.1	Bifidobacterium bifidum	RTP21222st1_D12_RTP21222_200807	SAMN31321409	2020-08-07	USA	Homo sapiens	1051	2	0	0	2.00
59	GCA_001020375.1	Bifidobacterium bifidum	324B	SAMN03097400	-	-	Homo sapiens	1052	2	0	0	2.00
60	GCA_027215325.1	Bifidobacterium bifidum	SDS-1425-OWp	SAMN32244237	2019-07-10	Canada: Vancouver	Homo sapiens	1053	2	0	0	2.00
61	GCA_027215545.1	Bifidobacterium bifidum	SDS-1424-OWp	SAMN32244263	2019-06-28	Canada: Vancouver	Homo sapiens	1053	2	0	0	2.00
62	GCA_900112465.1	Bifidobacterium bifidum	Calf96	SAMN05216254	-	-	-	1054	2	0	0	2.00
63	GCA_028202395.1	Bifidobacterium bifidum	J1101312st1_E10_J1101312_190322	SAMN31321382	2019-03-22	USA	Homo sapiens	1056	2	0	0	2.00
64	GCA_028202415.1	Bifidobacterium bifidum	J1101312st1_C7_J1101312_190322	SAMN31321381	2019-03-22	USA	Homo sapiens	1057	2	0	0	2.00
65	GCA_028203675.1	Bifidobacterium bifidum	J1101312st1_H2_J1101312_190322	SAMN31321384	2019-03-22	USA	Homo sapiens	1057	2	0	0	2.00
66	GCA_028203695.1	Bifidobacterium bifidum	J1101312st1_E3_J1101312_190322	SAMN31321383	2019-03-22	USA	Homo sapiens	1057	2	0	0	2.00
67	GCA_003437785.1	Bifidobacterium bifidum	TF05-39	SAMN09736884	2013-08-01	China: Shenzhen	Homo sapiens	1058	4	0	0	4.00
68	GCA_003466485.1	Bifidobacterium bifidum	TM05-15	SAMN09736979	2013-08-01	China: Shenzhen	Homo sapiens	1058	4	0	0	4.00
69	GCA_003468415.1	Bifidobacterium bifidum	AM36-1AC	SAMN09736479	2013-12-01	China: Shenzhen	Homo sapiens	1058	2	0	0	2.00
70	GCA_030218415.1	Bifidobacterium bifidum	UMB0776B	SAMN34996462	-	USA: Maywood, IL	Homo sapiens	1058	2	0	1	2.24
71	GCA_046763285.1	Bifidobacterium bifidum	LHP007	SAMN46218889	2021	United Kingdom: Norwich	Homo sapiens	1058	2	0	0	2.00
72	GCA_003436635.1	Bifidobacterium bifidum	TM02-17	SAMN09736965	2012-11-01	China: Shenzhen	Homo sapiens	1059	4	0	0	4.00
73	GCA_003436655.1	Bifidobacterium bifidum	TM02-15	SAMN09736964	2012-11-01	China: Shenzhen	Homo sapiens	1059	4	0	0	4.00
74	GCA_003436135.1	Bifidobacterium bifidum	TM07-4AC	SAMN09737006	2014-02-01	China: Shenzhen	Homo sapiens	1060	4	0	0	4.00
75	GCA_003436575.1	Bifidobacterium bifidum	TM04-12	SAMN09736968	2013-08-01	China: Shenzhen	Homo sapiens	1060	3	0	0	3.00
76	GCA_022133625.1	Bifidobacterium bifidum	DFI.7.59	SAMN24726072	-	USA:Chicago	Homo sapiens	1060	2	0	0	2.00
77	GCA_022134905.2	Bifidobacterium bifidum	DFI.7.51	SAMN24726067	-	USA:Chicago	Homo sapiens	1061	2	0	0	2.00
78	GCA_039913115.1	Bifidobacterium bifidum	RTP21221st1_H7_RTP21221_200709	SAMN31321408	2020-07-09	USA	Homo sapiens	1061	2	0	0	2.00
79	GCA_001405355.1	Bifidobacterium bifidum	2789STDY5608877	SAMEA3545285	2013	United Kingdom	Homo sapiens	1062	2	0	0	2.00
80	GCA_003437175.1	Bifidobacterium bifidum	TF07-22	SAMN09736904	2013-08-01	China: Shenzhen	Homo sapiens	1062	4	0	0	4.00
81	GCA_049191965.1	Bifidobacterium bifidum	IATA039	SAMN45053952	2022	Spain:Valencia	Homo sapiens	1062	1	0	0	1.00
82	GCA_017894325.1	Bifidobacterium bifidum	CNCM I-4319	SAMN15324980	2017-09	France	Homo sapiens	1064	2	0	0	2.00
83	GCA_009078055.1	Bifidobacterium bifidum	BIOML-A11	SAMN11944601	2015-12-09	USA:Boston	Homo sapiens	1065	2	0	0	2.00
84	GCA_009078115.1	Bifidobacterium bifidum	BIOML-A10	SAMN11944600	2015-12-09	USA:Boston	Homo sapiens	1065	2	0	0	2.00
85	GCA_009159495.1	Bifidobacterium bifidum	BIOML-A24	SAMN11944614	2015-12-09	USA:Boston	Homo sapiens	1065	2	1	0	2.24
86	GCA_009159505.1	Bifidobacterium bifidum	BIOML-A20	SAMN11944610	2015-12-09	USA:Boston	Homo sapiens	1065	2	0	0	2.00
87	GCA_009159555.1	Bifidobacterium bifidum	BIOML-A19	SAMN11944609	2015-12-09	USA:Boston	Homo sapiens	1065	3	1	0	3.16
88	GCA_009160825.1	Bifidobacterium bifidum	BIOML-A25	SAMN11944615	2015-12-09	USA:Boston	Homo sapiens	1065	3	0	0	3.00
89	GCA_009160885.1	Bifidobacterium bifidum	BIOML-A14	SAMN11944604	2015-12-09	USA:Boston	Homo sapiens	1065	2	0	0	2.00
90	GCA_009160905.1	Bifidobacterium bifidum	BIOML-A12	SAMN11944602	2015-12-09	USA:Boston	Homo sapiens	1065	2	0	0	2.00
91	GCA_009160915.1	Bifidobacterium bifidum	BIOML-A15	SAMN11944605	2015-12-09	USA:Boston	Homo sapiens	1065	2	0	0	2.00
92	GCA_039913175.1	Bifidobacterium bifidum	RTP21221st1_A9_RTP21221_200709	SAMN31321405	2020-07-09	USA	Homo sapiens	1065	2	0	0	2.00
93	GCA_000265095.1	Bifidobacterium bifidum BGN4	BGN4	SAMN02603486	-	South Korea	Homo sapiens	1066	2	0	0	2.00
94	GCA_009159095.1	Bifidobacterium bifidum	BIOML-A21	SAMN11944611	2015-12-09	USA:Boston	Homo sapiens	1066	2	0	0	2.00
95	GCA_009160945.1	Bifidobacterium bifidum	BIOML-A13	SAMN11944603	2015-12-09	USA:Boston	Homo sapiens	1066	2	0	0	2.00
96	GCA_016838705.1	Bifidobacterium bifidum	HN002	SAMN17735950	2017-06-08	South Korea: Jeongup	Homo sapiens	1066	2	0	0	2.00
97	GCA_028201895.1	Bifidobacterium bifidum	G6_h1001283B150217_200217	SAMN31321369	2020-02-17	USA	Homo sapiens	1066	2	0	0	2.00
98	GCA_028201955.1	Bifidobacterium bifidum	C7_h1001283B150217_200217	SAMN31321368	2020-02-17	USA	Homo sapiens	1066	2	0	0	2.00
99	GCA_028202035.1	Bifidobacterium bifidum	B1_h1001283B150217_200217	SAMN31321367	2020-02-17	USA	Homo sapiens	1066	2	0	0	2.00
100	GCA_028202125.1	Bifidobacterium bifidum	1001283st1_F2_1001283B150304_161114	SAMN31321343	2016-11-14	USA	Homo sapiens	1066	2	0	0	2.00