Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_028202835.1	Bifidobacterium bifidum	1001216st1_H8_1001216I_160404	SAMN31321331	2016-04-04	USA	Homo sapiens	0	2	0	0	2.00
2	GCA_028202785.1	Bifidobacterium bifidum	1001216st1_E8_1001216I_160404	SAMN31321328	2016-04-04	USA	Homo sapiens	4	2	0	0	2.00
3	GCA_003094755.1	Bifidobacterium bifidum	DS30_23	SAMN08949003	2018-01-11	USA:MD	Homo sapiens	10	2	0	0	2.00
4	GCA_028202595.1	Bifidobacterium bifidum	1001216st1_H2_BSD2780120875b_170604	SAMN31321329	2017-06-04	USA	Homo sapiens	12	2	0	0	2.00
5	GCA_020908005.1	Bifidobacterium bifidum	ICIS-504	SAMN22746550	2016	Russia: Orenburg	Homo sapiens	13	2	0	0	2.00
6	GCA_033959405.1	Bifidobacterium bifidum	BB11	SAMN38280574	1990-05-25	South Africa	Bos taurus	14	2	0	0	2.00
7	GCA_034427835.1	Bifidobacterium bifidum	CCRC11847	SAMN38289445	1990-05-25	South Africa	Bos taurus	14	2	0	0	2.00
8	GCA_029723435.1	Bifidobacterium bifidum	LH_1044	SAMN24838607	2017	United Kingdom	Homo sapiens	15	2	0	0	2.00
9	GCA_029723565.1	Bifidobacterium bifidum	LH_1017	SAMN24838604	2017	United Kingdom	Homo sapiens	15	2	0	0	2.00
10	GCA_029723595.1	Bifidobacterium bifidum	LH_1016	SAMN24838603	2017	United Kingdom	Homo sapiens	15	2	0	0	2.00
11	GCA_029723555.1	Bifidobacterium bifidum	LH_1036	SAMN24838606	2017	United Kingdom	Homo sapiens	17	2	0	0	2.00
12	GCA_029723695.1	Bifidobacterium bifidum	LH_986	SAMN24838598	2017	United Kingdom	Homo sapiens	17	2	0	0	2.00
13	GCA_028202615.1	Bifidobacterium bifidum	1001216st1_B8_1028SCRN_200821	SAMN31321327	2020-08-21	USA	Homo sapiens	18	2	0	0	2.00
14	GCA_029723675.1	Bifidobacterium bifidum	LH_1013	SAMN24838602	2017	United Kingdom	Homo sapiens	18	2	0	0	2.00
15	GCA_003094795.1	Bifidobacterium bifidum	DS25_23	SAMN08949001	2017-03-29	USA:MD	Homo sapiens	19	2	0	0	2.00
16	GCA_024341745.1	Bifidobacterium bifidum JCM 1254	-	SAMD00422522	-	-	-	19	1	0	0	1.00
17	GCA_003094645.1	Bifidobacterium bifidum	DS33_23	SAMN08949006	2017-11-03	USA:MD	Homo sapiens	24	2	0	0	2.00
18	GCA_003094735.1	Bifidobacterium bifidum	DS31_23	SAMN08949004	2018-03-12	USA:MD	Homo sapiens	25	2	0	0	2.00
19	GCA_003095035.1	Bifidobacterium bifidum	DS26_23	SAMN08949002	2018-04-17	USA:MD	Homo sapiens	28	2	0	0	2.00
20	GCA_001020245.1	Bifidobacterium bifidum	A8	SAMN03097401	-	-	Homo sapiens	31	2	0	0	2.00
21	GCA_001020275.1	Bifidobacterium bifidum	LMG 11582	SAMN03097403	-	-	Homo sapiens	32	2	0	0	2.00
22	GCA_029011515.1	Bifidobacterium bifidum	VSI20	SAMN33275447	2020-12-04	USA: Houston, TX	Homo sapiens	33	2	0	0	2.00
23	GCA_028202695.1	Bifidobacterium bifidum	1001216st1_H5_1028SCRN_200821	SAMN31321330	2020-08-21	USA	Homo sapiens	141	2	0	0	2.00
24	GCA_003094715.1	Bifidobacterium bifidum	DS32_23	SAMN08949005	2017-08-24	USA:MD	Homo sapiens	976	2	0	0	2.00
25	GCA_001020335.1	Bifidobacterium bifidum	LMG 11583	SAMN03097404	-	-	Homo sapiens	1010	2	0	0	2.00
26	GCA_008868415.1	Bifidobacterium bifidum	BIO5480	SAMN12856545	-	-	Homo sapiens	1011	2	0	0	2.00
27	GCA_049192055.1	Bifidobacterium bifidum	IATA016	SAMN45053945	2022	Spain:Valencia	Homo sapiens	1024	2	0	0	2.00
28	GCA_049192085.1	Bifidobacterium bifidum	IATA001	SAMN45053939	2022	Spain:Valencia	Homo sapiens	1024	2	0	0	2.00
29	GCA_016069985.1	Bifidobacterium bifidum	VKPM Ac-1579	SAMN15880060	2019	Russia: Moscow	Homo sapiens	1034	2	0	0	2.00
30	GCA_001595435.1	Bifidobacterium bifidum	791	SAMN04155634	1993-04-23	Russia: Nizhny Novgorod	Homo sapiens	1057	2	0	0	2.00
31	GCA_003790385.1	Bifidobacterium bifidum	ICIS-643	SAMN06606988	2014	Russia: South Ural	Homo sapiens	1057	2	0	0	2.00
32	GCA_004799295.1	Bifidobacterium bifidum	ICIS-202	SAMN07709009	2016	Russia: Orenburg	Homo sapiens	1057	2	0	0	2.00
33	GCA_016070035.1	Bifidobacterium bifidum	VKPM Ac-1784	SAMN15880062	2019	Russia: Moscow	Homo sapiens	1057	2	0	0	2.00
34	GCA_020710245.1	Bifidobacterium bifidum	ICIS-629	SAMN22555201	2016	Russia: Orenburg	Homo sapiens	1057	3	0	0	3.00
35	GCA_020861855.1	Bifidobacterium bifidum	ICIS-176	SAMN22746553	2016	Russia: Orenburg	Homo sapiens	1057	3	0	0	3.00
36	GCA_022014355.1	Bifidobacterium bifidum	791	SAMN06611220	2014	Russia: Orenburg	Homo sapiens	1057	2	0	0	2.00
37	GCA_002114145.1	Bifidobacterium bifidum	ICIS-310	SAMN05858649	2013-11-02	Russia: South Ural	Homo sapiens	1058	2	0	0	2.00
38	GCA_003573895.1	Bifidobacterium bifidum	-	SAMD00078313	-	-	-	1074	2	0	0	2.00
39	GCA_049205235.1	Bifidobacterium bifidum	IATA102	SAMN45053967	2022	Spain:Valencia	Homo sapiens	1076	2	0	0	2.00
40	GCA_049191345.1	Bifidobacterium bifidum	IATA139	SAMN45053983	2022	Spain:Valencia	Homo sapiens	1078	2	0	0	2.00
41	GCA_026076095.1	Bifidobacterium bifidum	P671	SAMN31654352	2018	Spain	Homo sapiens	1079	4	0	0	4.00
42	GCA_000164965.1	Bifidobacterium bifidum S17	S17	SAMN02603395	-	-	-	1083	2	0	0	2.00
43	GCA_042848835.1	Bifidobacterium bifidum	i03-0019-A5	SAMD00758988	2017-12-15	Japan	Homo sapiens	1088	2	0	0	2.00
44	GCA_028203855.1	Bifidobacterium bifidum	D53st1_A12_D53t1_180928	SAMN31321365	2018-09-28	USA	Homo sapiens	1093	2	0	0	2.00
45	GCA_028203835.1	Bifidobacterium bifidum	D53st1_B4_D53t1_180928	SAMN31321366	2018-09-28	USA	Homo sapiens	1094	2	0	0	2.00
46	GCA_045290295.1	Bifidobacterium bifidum	lw02	SAMN39525295	2017-10-12	China	Homo sapiens	1095	4	0	0	4.00
47	GCA_017894325.1	Bifidobacterium bifidum	CNCM I-4319	SAMN15324980	2017-09	France	Homo sapiens	1096	2	0	0	2.00
48	GCA_001020255.1	Bifidobacterium bifidum	156B	SAMN03097399	-	-	Homo sapiens	1097	2	0	0	2.00
49	GCA_039913015.1	Bifidobacterium bifidum	RTP31036st1_A12_RTP31036_200814	SAMN31321415	2020-08-14	USA	Homo sapiens	1100	2	0	0	2.00
50	GCA_039913035.1	Bifidobacterium bifidum	RTP31036st1_G6_RTP31036_200814	SAMN31321416	2020-08-14	USA	Homo sapiens	1101	2	0	0	2.00
51	GCA_049191915.1	Bifidobacterium bifidum	IATA049	SAMN45053955	2022	Spain:Valencia	Homo sapiens	1101	2	0	0	2.00
52	GCA_009078055.1	Bifidobacterium bifidum	BIOML-A11	SAMN11944601	2015-12-09	USA:Boston	Homo sapiens	1102	2	0	0	2.00
53	GCA_009078115.1	Bifidobacterium bifidum	BIOML-A10	SAMN11944600	2015-12-09	USA:Boston	Homo sapiens	1102	2	0	0	2.00
54	GCA_009159095.1	Bifidobacterium bifidum	BIOML-A21	SAMN11944611	2015-12-09	USA:Boston	Homo sapiens	1102	2	0	0	2.00
55	GCA_009159495.1	Bifidobacterium bifidum	BIOML-A24	SAMN11944614	2015-12-09	USA:Boston	Homo sapiens	1102	2	1	0	2.24
56	GCA_009159505.1	Bifidobacterium bifidum	BIOML-A20	SAMN11944610	2015-12-09	USA:Boston	Homo sapiens	1102	2	0	0	2.00
57	GCA_009159555.1	Bifidobacterium bifidum	BIOML-A19	SAMN11944609	2015-12-09	USA:Boston	Homo sapiens	1102	3	1	0	3.16
58	GCA_009160825.1	Bifidobacterium bifidum	BIOML-A25	SAMN11944615	2015-12-09	USA:Boston	Homo sapiens	1102	3	0	0	3.00
59	GCA_009160885.1	Bifidobacterium bifidum	BIOML-A14	SAMN11944604	2015-12-09	USA:Boston	Homo sapiens	1102	2	0	0	2.00
60	GCA_009160905.1	Bifidobacterium bifidum	BIOML-A12	SAMN11944602	2015-12-09	USA:Boston	Homo sapiens	1102	2	0	0	2.00
61	GCA_009160915.1	Bifidobacterium bifidum	BIOML-A15	SAMN11944605	2015-12-09	USA:Boston	Homo sapiens	1102	2	0	0	2.00
62	GCA_009160945.1	Bifidobacterium bifidum	BIOML-A13	SAMN11944603	2015-12-09	USA:Boston	Homo sapiens	1102	2	0	0	2.00
63	GCA_003573955.1	Bifidobacterium bifidum LMG 13195	-	SAMD00078038	-	-	-	1103	2	0	0	2.00
64	GCA_009160845.1	Bifidobacterium bifidum	BIOML-A17	SAMN11944607	2015-12-09	USA:Boston	Homo sapiens	1104	2	0	0	2.00
65	GCA_000165905.1	Bifidobacterium bifidum PRL2010	PRL2010	SAMN02603510	-	-	Homo sapiens	1105	2	0	0	2.00
66	GCA_001020375.1	Bifidobacterium bifidum	324B	SAMN03097400	-	-	Homo sapiens	1105	2	0	0	2.00
67	GCA_049191965.1	Bifidobacterium bifidum	IATA039	SAMN45053952	2022	Spain:Valencia	Homo sapiens	1106	1	0	0	1.00
68	GCA_009160775.1	Bifidobacterium bifidum	BIOML-A18	SAMN11944608	2015-12-09	USA:Boston	Homo sapiens	1107	2	0	0	2.00
69	GCA_011029205.1	Bifidobacterium bifidum	VA07-1AN	SAMN14087237	2015-08	Thailand: Khon Kean	Homo sapiens	1107	4	0	0	4.00
70	GCA_039913115.1	Bifidobacterium bifidum	RTP21221st1_H7_RTP21221_200709	SAMN31321408	2020-07-09	USA	Homo sapiens	1107	2	0	0	2.00
71	GCA_039913175.1	Bifidobacterium bifidum	RTP21221st1_A9_RTP21221_200709	SAMN31321405	2020-07-09	USA	Homo sapiens	1107	2	0	0	2.00
72	GCA_009160865.1	Bifidobacterium bifidum	BIOML-A16	SAMN11944606	2015-12-09	USA:Boston	Homo sapiens	1110	2	0	0	2.00
73	GCA_049204775.1	Bifidobacterium bifidum	IATA148	SAMN45053989	2022	Spain:Valencia	Homo sapiens	1110	2	0	0	2.00
74	GCA_039913135.1	Bifidobacterium bifidum	RTP21221st1_H4_RTP21221_200709	SAMN31321407	2020-07-09	USA	Homo sapiens	1112	2	0	0	2.00
75	GCA_049192095.1	Bifidobacterium bifidum	IATA005	SAMN45053941	2022	Spain:Valencia	Homo sapiens	1112	2	0	0	2.00
76	GCA_003437345.1	Bifidobacterium bifidum	TF06-13	SAMN09736889	2013-08-01	China: Shenzhen	Homo sapiens	1113	3	0	0	3.00
77	GCA_028202495.1	Bifidobacterium bifidum	H9_hBSD2780061687_210209	SAMN31321394	2021-02-09	USA	Homo sapiens	1113	4	0	0	4.00
78	GCA_028202675.1	Bifidobacterium bifidum	1001271st1_H11_1001271B_150615	SAMN31321335	2015-06-15	USA	Homo sapiens	1113	3	0	0	3.00
79	GCA_028202815.1	Bifidobacterium bifidum	1001271st1_A6_1001270H_150608	SAMN31321332	2015-06-08	USA	Homo sapiens	1113	3	0	0	3.00
80	GCA_028203575.1	Bifidobacterium bifidum	F10_hBSD2780061687_210209	SAMN31321389	2021-02-09	USA	Homo sapiens	1113	4	0	0	4.00
81	GCA_028203625.1	Bifidobacterium bifidum	E2_hBSD2780061687_210209	SAMN31321386	2021-02-09	USA	Homo sapiens	1113	4	0	0	4.00
82	GCA_039913195.1	Bifidobacterium bifidum	H3_hBSD2780061687_210209	SAMN31321393	2021-02-09	USA	Homo sapiens	1113	4	0	0	4.00
83	GCA_039913275.1	Bifidobacterium bifidum	F12_hBSD2780061687_210209	SAMN31321391	2021-02-09	USA	Homo sapiens	1113	4	0	0	4.00
84	GCA_039913335.1	Bifidobacterium bifidum	E4_hBSD2780061687_210209	SAMN31321387	2021-02-09	USA	Homo sapiens	1113	4	0	0	4.00
85	GCA_003437325.1	Bifidobacterium bifidum	TF06-14AC	SAMN09736890	2013-08-01	China: Shenzhen	Homo sapiens	1114	3	0	0	3.00
86	GCA_028202855.1	Bifidobacterium bifidum	1001136st1_C1_1001136B_160425	SAMN31321326	2016-04-25	USA	Homo sapiens	1114	2	0	0	2.00
87	GCA_039913215.1	Bifidobacterium bifidum	G9_hBSD2780061687_210209	SAMN31321392	2021-02-09	USA	Homo sapiens	1114	4	0	0	4.00
88	GCA_039913315.1	Bifidobacterium bifidum	E5_hBSD2780061687_210209	SAMN31321388	2021-02-09	USA	Homo sapiens	1114	4	0	0	4.00
89	GCA_001020325.1	Bifidobacterium bifidum	LMG 13200	SAMN03097405	-	-	Homo sapiens	1115	2	0	0	2.00
90	GCA_028202015.1	Bifidobacterium bifidum	D52st1_E11_D52t1_170925	SAMN31321364	2017-09-25	USA	Homo sapiens	1115	2	0	0	2.00
91	GCA_028202735.1	Bifidobacterium bifidum	1001271st1_F2_1001271B_151109	SAMN31321333	2015-11-09	USA	Homo sapiens	1115	3	0	0	3.00
92	GCA_039913295.1	Bifidobacterium bifidum	D8_hBSD2780061687_210209	SAMN31321385	2021-02-09	USA	Homo sapiens	1115	4	0	0	4.00
93	GCA_028202715.1	Bifidobacterium bifidum	1001271st1_G7_1001270J_160509	SAMN31321334	2016-05-09	USA	Homo sapiens	1116	2	0	0	2.00
94	GCA_028203495.1	Bifidobacterium bifidum	RTP21484st2_A9_RTP21484_190118	SAMN31321414	2019-01-18	USA	Homo sapiens	1116	2	0	0	2.00
95	GCA_028203535.1	Bifidobacterium bifidum	RTP21221st1_G2_RTP21221_200709	SAMN31321406	2020-07-09	USA	Homo sapiens	1116	1	0	0	1.00
96	GCA_028368265.1	Bifidobacterium bifidum	RTP21484st2_G9_RTP21484_190118	SAMN31321246	2019-01-18	USA	Homo sapiens	1116	2	0	0	2.00
97	GCA_027215325.1	Bifidobacterium bifidum	SDS-1425-OWp	SAMN32244237	2019-07-10	Canada: Vancouver	Homo sapiens	1117	2	0	0	2.00
98	GCA_027215545.1	Bifidobacterium bifidum	SDS-1424-OWp	SAMN32244263	2019-06-28	Canada: Vancouver	Homo sapiens	1117	2	0	0	2.00
99	GCA_039913255.1	Bifidobacterium bifidum	F11_hBSD2780061687_210209	SAMN31321390	2021-02-09	USA	Homo sapiens	1118	4	0	0	4.00
100	GCA_028201895.1	Bifidobacterium bifidum	G6_h1001283B150217_200217	SAMN31321369	2020-02-17	USA	Homo sapiens	1119	2	0	0	2.00