GCA_028320325.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaBENOCILN_3 (original name was: gnl|Prokka|BENOCILN_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	1,290	11,475

gnlProkkaBENOCILN_7 (original name was: gnl|Prokka|BENOCILN_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	RiPP-like	81,133	87,785

gnlProkkaBENOCILN_9 (original name was: gnl|Prokka|BENOCILN_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	T3PKS	1	28,874

Region	Type	From	To	Similarity
Region 3.1	RiPP-like	1,290	11,475
Region 7.1	RiPP-like	81,133	87,785
Region 9.1	T3PKS	1	28,874

No secondary metabolite regions were found in these records:: gnlProkkaBENOCILN_1 (original name was: gnl|Prokka|BENOCILN_1); gnlProkkaBENOCILN_2 (original name was: gnl|Prokka|BENOCILN_2); gnlProkkaBENOCILN_4 (original name was: gnl|Prokka|BENOCILN_4); gnlProkkaBENOCILN_5 (original name was: gnl|Prokka|BENOCILN_5); gnlProkkaBENOCILN_6 (original name was: gnl|Prokka|BENOCILN_6); gnlProkkaBENOCILN_8 (original name was: gnl|Prokka|BENOCILN_8); gnlProkkaBENOCILN_10 (original name was: gnl|Prokka|BENOCILN_10); gnlProkkaBENOCILN_11 (original name was: gnl|Prokka|BENOCILN_11); gnlProkkaBENOCILN_12 (original name was: gnl|Prokka|BENOCILN_12); gnlProkkaBENOCILN_13 (original name was: gnl|Prokka|BENOCILN_13); gnlProkkaBENOCILN_14 (original name was: gnl|Prokka|BENOCILN_14); gnlProkkaBENOCILN_15 (original name was: gnl|Prokka|BENOCILN_15); gnlProkkaBENOCILN_16 (original name was: gnl|Prokka|BENOCILN_16); gnlProkkaBENOCILN_17 (original name was: gnl|Prokka|BENOCILN_17); gnlProkkaBENOCILN_18 (original name was: gnl|Prokka|BENOCILN_18); gnlProkkaBENOCILN_19 (original name was: gnl|Prokka|BENOCILN_19); gnlProkkaBENOCILN_20 (original name was: gnl|Prokka|BENOCILN_20); gnlProkkaBENOCILN_21 (original name was: gnl|Prokka|BENOCILN_21); gnlProkkaBENOCILN_22 (original name was: gnl|Prokka|BENOCILN_22); gnlProkkaBENOCILN_23 (original name was: gnl|Prokka|BENOCILN_23); gnlProkkaBENOCILN_24 (original name was: gnl|Prokka|BENOCILN_24); gnlProkkaBENOCILN_25 (original name was: gnl|Prokka|BENOCILN_25); gnlProkkaBENOCILN_26 (original name was: gnl|Prokka|BENOCILN_26); gnlProkkaBENOCILN_27 (original name was: gnl|Prokka|BENOCILN_27); gnlProkkaBENOCILN_28 (original name was: gnl|Prokka|BENOCILN_28); gnlProkkaBENOCILN_29 (original name was: gnl|Prokka|BENOCILN_29); gnlProkkaBENOCILN_30 (original name was: gnl|Prokka|BENOCILN_30); gnlProkkaBENOCILN_31 (original name was: gnl|Prokka|BENOCILN_31); gnlProkkaBENOCILN_32 (original name was: gnl|Prokka|BENOCILN_32)

Compact view

gnlProkkaBENOCILN_3 - Region 1 - RiPP-like

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Location: 1,290 - 11,475 nt. (total: 10,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBENOCILN_7 - Region 1 - RiPP-like

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Location: 81,133 - 87,785 nt. (total: 6,653 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBENOCILN_9 - Region 1 - T3PKS

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Location: 1 - 28,874 nt. (total: 28,874 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.