GCA_028321125.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaCNKJEPBB_3 (original name was: gnl|Prokka|CNKJEPBB_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	1,290	11,475

gnlProkkaCNKJEPBB_6 (original name was: gnl|Prokka|CNKJEPBB_6)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	RiPP-like	1	6,653

gnlProkkaCNKJEPBB_8 (original name was: gnl|Prokka|CNKJEPBB_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	T3PKS	1	28,661

Region	Type	From	To	Similarity
Region 3.1	RiPP-like	1,290	11,475
Region 6.1	RiPP-like	1	6,653
Region 8.1	T3PKS	1	28,661

No secondary metabolite regions were found in these records:: gnlProkkaCNKJEPBB_1 (original name was: gnl|Prokka|CNKJEPBB_1); gnlProkkaCNKJEPBB_2 (original name was: gnl|Prokka|CNKJEPBB_2); gnlProkkaCNKJEPBB_4 (original name was: gnl|Prokka|CNKJEPBB_4); gnlProkkaCNKJEPBB_5 (original name was: gnl|Prokka|CNKJEPBB_5); gnlProkkaCNKJEPBB_7 (original name was: gnl|Prokka|CNKJEPBB_7); gnlProkkaCNKJEPBB_9 (original name was: gnl|Prokka|CNKJEPBB_9); gnlProkkaCNKJEPBB_10 (original name was: gnl|Prokka|CNKJEPBB_10); gnlProkkaCNKJEPBB_11 (original name was: gnl|Prokka|CNKJEPBB_11); gnlProkkaCNKJEPBB_12 (original name was: gnl|Prokka|CNKJEPBB_12); gnlProkkaCNKJEPBB_13 (original name was: gnl|Prokka|CNKJEPBB_13); gnlProkkaCNKJEPBB_14 (original name was: gnl|Prokka|CNKJEPBB_14); gnlProkkaCNKJEPBB_15 (original name was: gnl|Prokka|CNKJEPBB_15); gnlProkkaCNKJEPBB_16 (original name was: gnl|Prokka|CNKJEPBB_16); gnlProkkaCNKJEPBB_17 (original name was: gnl|Prokka|CNKJEPBB_17); gnlProkkaCNKJEPBB_18 (original name was: gnl|Prokka|CNKJEPBB_18); gnlProkkaCNKJEPBB_19 (original name was: gnl|Prokka|CNKJEPBB_19); gnlProkkaCNKJEPBB_20 (original name was: gnl|Prokka|CNKJEPBB_20); gnlProkkaCNKJEPBB_21 (original name was: gnl|Prokka|CNKJEPBB_21); gnlProkkaCNKJEPBB_22 (original name was: gnl|Prokka|CNKJEPBB_22); gnlProkkaCNKJEPBB_23 (original name was: gnl|Prokka|CNKJEPBB_23); gnlProkkaCNKJEPBB_24 (original name was: gnl|Prokka|CNKJEPBB_24); gnlProkkaCNKJEPBB_25 (original name was: gnl|Prokka|CNKJEPBB_25); gnlProkkaCNKJEPBB_26 (original name was: gnl|Prokka|CNKJEPBB_26); gnlProkkaCNKJEPBB_27 (original name was: gnl|Prokka|CNKJEPBB_27); gnlProkkaCNKJEPBB_28 (original name was: gnl|Prokka|CNKJEPBB_28); gnlProkkaCNKJEPBB_29 (original name was: gnl|Prokka|CNKJEPBB_29); gnlProkkaCNKJEPBB_30 (original name was: gnl|Prokka|CNKJEPBB_30); gnlProkkaCNKJEPBB_31 (original name was: gnl|Prokka|CNKJEPBB_31); gnlProkkaCNKJEPBB_32 (original name was: gnl|Prokka|CNKJEPBB_32); gnlProkkaCNKJEPBB_33 (original name was: gnl|Prokka|CNKJEPBB_33); gnlProkkaCNKJEPBB_34 (original name was: gnl|Prokka|CNKJEPBB_34); gnlProkkaCNKJEPBB_35 (original name was: gnl|Prokka|CNKJEPBB_35); gnlProkkaCNKJEPBB_36 (original name was: gnl|Prokka|CNKJEPBB_36); gnlProkkaCNKJEPBB_37 (original name was: gnl|Prokka|CNKJEPBB_37); gnlProkkaCNKJEPBB_38 (original name was: gnl|Prokka|CNKJEPBB_38); gnlProkkaCNKJEPBB_39 (original name was: gnl|Prokka|CNKJEPBB_39); gnlProkkaCNKJEPBB_40 (original name was: gnl|Prokka|CNKJEPBB_40); gnlProkkaCNKJEPBB_41 (original name was: gnl|Prokka|CNKJEPBB_41); gnlProkkaCNKJEPBB_42 (original name was: gnl|Prokka|CNKJEPBB_42); gnlProkkaCNKJEPBB_43 (original name was: gnl|Prokka|CNKJEPBB_43); gnlProkkaCNKJEPBB_44 (original name was: gnl|Prokka|CNKJEPBB_44); gnlProkkaCNKJEPBB_45 (original name was: gnl|Prokka|CNKJEPBB_45); gnlProkkaCNKJEPBB_46 (original name was: gnl|Prokka|CNKJEPBB_46); gnlProkkaCNKJEPBB_47 (original name was: gnl|Prokka|CNKJEPBB_47); gnlProkkaCNKJEPBB_48 (original name was: gnl|Prokka|CNKJEPBB_48); gnlProkkaCNKJEPBB_49 (original name was: gnl|Prokka|CNKJEPBB_49)

Compact view

gnlProkkaCNKJEPBB_3 - Region 1 - RiPP-like

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Location: 1,290 - 11,475 nt. (total: 10,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCNKJEPBB_6 - Region 1 - RiPP-like

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Location: 1 - 6,653 nt. (total: 6,653 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCNKJEPBB_8 - Region 1 - T3PKS

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Location: 1 - 28,661 nt. (total: 28,661 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.