GCA_028321165.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaFGBJJHPG_2 (original name was: gnl|Prokka|FGBJJHPG_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	100,430	110,615

gnlProkkaFGBJJHPG_5 (original name was: gnl|Prokka|FGBJJHPG_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	RiPP-like	81,133	87,785

gnlProkkaFGBJJHPG_22 (original name was: gnl|Prokka|FGBJJHPG_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	T3PKS	35,319	76,491

Region	Type	From	To	Similarity
Region 2.1	RiPP-like	100,430	110,615
Region 5.1	RiPP-like	81,133	87,785
Region 22.1	T3PKS	35,319	76,491

No secondary metabolite regions were found in these records:: gnlProkkaFGBJJHPG_1 (original name was: gnl|Prokka|FGBJJHPG_1); gnlProkkaFGBJJHPG_3 (original name was: gnl|Prokka|FGBJJHPG_3); gnlProkkaFGBJJHPG_4 (original name was: gnl|Prokka|FGBJJHPG_4); gnlProkkaFGBJJHPG_6 (original name was: gnl|Prokka|FGBJJHPG_6); gnlProkkaFGBJJHPG_7 (original name was: gnl|Prokka|FGBJJHPG_7); gnlProkkaFGBJJHPG_8 (original name was: gnl|Prokka|FGBJJHPG_8); gnlProkkaFGBJJHPG_9 (original name was: gnl|Prokka|FGBJJHPG_9); gnlProkkaFGBJJHPG_10 (original name was: gnl|Prokka|FGBJJHPG_10); gnlProkkaFGBJJHPG_11 (original name was: gnl|Prokka|FGBJJHPG_11); gnlProkkaFGBJJHPG_12 (original name was: gnl|Prokka|FGBJJHPG_12); gnlProkkaFGBJJHPG_13 (original name was: gnl|Prokka|FGBJJHPG_13); gnlProkkaFGBJJHPG_14 (original name was: gnl|Prokka|FGBJJHPG_14); gnlProkkaFGBJJHPG_15 (original name was: gnl|Prokka|FGBJJHPG_15); gnlProkkaFGBJJHPG_16 (original name was: gnl|Prokka|FGBJJHPG_16); gnlProkkaFGBJJHPG_17 (original name was: gnl|Prokka|FGBJJHPG_17); gnlProkkaFGBJJHPG_18 (original name was: gnl|Prokka|FGBJJHPG_18); gnlProkkaFGBJJHPG_19 (original name was: gnl|Prokka|FGBJJHPG_19); gnlProkkaFGBJJHPG_20 (original name was: gnl|Prokka|FGBJJHPG_20); gnlProkkaFGBJJHPG_21 (original name was: gnl|Prokka|FGBJJHPG_21); gnlProkkaFGBJJHPG_23 (original name was: gnl|Prokka|FGBJJHPG_23); gnlProkkaFGBJJHPG_24 (original name was: gnl|Prokka|FGBJJHPG_24); gnlProkkaFGBJJHPG_25 (original name was: gnl|Prokka|FGBJJHPG_25); gnlProkkaFGBJJHPG_26 (original name was: gnl|Prokka|FGBJJHPG_26); gnlProkkaFGBJJHPG_27 (original name was: gnl|Prokka|FGBJJHPG_27); gnlProkkaFGBJJHPG_28 (original name was: gnl|Prokka|FGBJJHPG_28); gnlProkkaFGBJJHPG_29 (original name was: gnl|Prokka|FGBJJHPG_29); gnlProkkaFGBJJHPG_30 (original name was: gnl|Prokka|FGBJJHPG_30); gnlProkkaFGBJJHPG_31 (original name was: gnl|Prokka|FGBJJHPG_31); gnlProkkaFGBJJHPG_32 (original name was: gnl|Prokka|FGBJJHPG_32); gnlProkkaFGBJJHPG_33 (original name was: gnl|Prokka|FGBJJHPG_33); gnlProkkaFGBJJHPG_34 (original name was: gnl|Prokka|FGBJJHPG_34); gnlProkkaFGBJJHPG_35 (original name was: gnl|Prokka|FGBJJHPG_35); gnlProkkaFGBJJHPG_36 (original name was: gnl|Prokka|FGBJJHPG_36); gnlProkkaFGBJJHPG_37 (original name was: gnl|Prokka|FGBJJHPG_37); gnlProkkaFGBJJHPG_38 (original name was: gnl|Prokka|FGBJJHPG_38); gnlProkkaFGBJJHPG_39 (original name was: gnl|Prokka|FGBJJHPG_39)

Compact view

gnlProkkaFGBJJHPG_2 - Region 1 - RiPP-like

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Location: 100,430 - 110,615 nt. (total: 10,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFGBJJHPG_5 - Region 1 - RiPP-like

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Location: 81,133 - 87,785 nt. (total: 6,653 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFGBJJHPG_22 - Region 1 - T3PKS

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Location: 35,319 - 76,491 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.