GCA_028321915.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMKOOJEBI_3 (original name was: gnl|Prokka|MKOOJEBI_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	cyclic-lactone-autoinducer	58,460	79,165

gnlProkkaMKOOJEBI_4 (original name was: gnl|Prokka|MKOOJEBI_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	terpene	73,128	85,473

gnlProkkaMKOOJEBI_11 (original name was: gnl|Prokka|MKOOJEBI_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	106,901	119,051

gnlProkkaMKOOJEBI_22 (original name was: gnl|Prokka|MKOOJEBI_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	T3PKS	213,327	254,496

Region	Type	From	To	Similarity
Region 3.1	cyclic-lactone-autoinducer	58,460	79,165
Region 4.1	terpene	73,128	85,473
Region 11.1	RiPP-like	106,901	119,051
Region 22.1	T3PKS	213,327	254,496

No secondary metabolite regions were found in these records:: gnlProkkaMKOOJEBI_1 (original name was: gnl|Prokka|MKOOJEBI_1); gnlProkkaMKOOJEBI_2 (original name was: gnl|Prokka|MKOOJEBI_2); gnlProkkaMKOOJEBI_5 (original name was: gnl|Prokka|MKOOJEBI_5); gnlProkkaMKOOJEBI_6 (original name was: gnl|Prokka|MKOOJEBI_6); gnlProkkaMKOOJEBI_7 (original name was: gnl|Prokka|MKOOJEBI_7); gnlProkkaMKOOJEBI_8 (original name was: gnl|Prokka|MKOOJEBI_8); gnlProkkaMKOOJEBI_9 (original name was: gnl|Prokka|MKOOJEBI_9); gnlProkkaMKOOJEBI_10 (original name was: gnl|Prokka|MKOOJEBI_10); gnlProkkaMKOOJEBI_12 (original name was: gnl|Prokka|MKOOJEBI_12); gnlProkkaMKOOJEBI_13 (original name was: gnl|Prokka|MKOOJEBI_13); gnlProkkaMKOOJEBI_14 (original name was: gnl|Prokka|MKOOJEBI_14); gnlProkkaMKOOJEBI_15 (original name was: gnl|Prokka|MKOOJEBI_15); gnlProkkaMKOOJEBI_16 (original name was: gnl|Prokka|MKOOJEBI_16); gnlProkkaMKOOJEBI_17 (original name was: gnl|Prokka|MKOOJEBI_17); gnlProkkaMKOOJEBI_18 (original name was: gnl|Prokka|MKOOJEBI_18); gnlProkkaMKOOJEBI_19 (original name was: gnl|Prokka|MKOOJEBI_19); gnlProkkaMKOOJEBI_20 (original name was: gnl|Prokka|MKOOJEBI_20); gnlProkkaMKOOJEBI_21 (original name was: gnl|Prokka|MKOOJEBI_21); gnlProkkaMKOOJEBI_23 (original name was: gnl|Prokka|MKOOJEBI_23); gnlProkkaMKOOJEBI_24 (original name was: gnl|Prokka|MKOOJEBI_24); gnlProkkaMKOOJEBI_25 (original name was: gnl|Prokka|MKOOJEBI_25); gnlProkkaMKOOJEBI_26 (original name was: gnl|Prokka|MKOOJEBI_26); gnlProkkaMKOOJEBI_27 (original name was: gnl|Prokka|MKOOJEBI_27); gnlProkkaMKOOJEBI_28 (original name was: gnl|Prokka|MKOOJEBI_28); gnlProkkaMKOOJEBI_29 (original name was: gnl|Prokka|MKOOJEBI_29); gnlProkkaMKOOJEBI_30 (original name was: gnl|Prokka|MKOOJEBI_30); gnlProkkaMKOOJEBI_31 (original name was: gnl|Prokka|MKOOJEBI_31); gnlProkkaMKOOJEBI_32 (original name was: gnl|Prokka|MKOOJEBI_32); gnlProkkaMKOOJEBI_33 (original name was: gnl|Prokka|MKOOJEBI_33); gnlProkkaMKOOJEBI_34 (original name was: gnl|Prokka|MKOOJEBI_34); gnlProkkaMKOOJEBI_35 (original name was: gnl|Prokka|MKOOJEBI_35)

Compact view

gnlProkkaMKOOJEBI_3 - Region 1 - cyclic-lactone-autoinducer

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Location: 58,460 - 79,165 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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core biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMKOOJEBI_4 - Region 1 - terpene

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Location: 73,128 - 85,473 nt. (total: 12,346 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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Gene details

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMKOOJEBI_11 - Region 1 - RiPP-like

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Location: 106,901 - 119,051 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMKOOJEBI_22 - Region 1 - T3PKS

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Location: 213,327 - 254,496 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.