GCA_028322035.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaHCCEJNIB_2 (original name was: gnl|Prokka|HCCEJNIB_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	668	10,853

gnlProkkaHCCEJNIB_10 (original name was: gnl|Prokka|HCCEJNIB_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	T3PKS	1	28,661

gnlProkkaHCCEJNIB_17 (original name was: gnl|Prokka|HCCEJNIB_17)

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	RiPP-like	1	7,334

Region	Type	From	To	Similarity
Region 2.1	RiPP-like	668	10,853
Region 10.1	T3PKS	1	28,661
Region 17.1	RiPP-like	1	7,334

No secondary metabolite regions were found in these records:: gnlProkkaHCCEJNIB_1 (original name was: gnl|Prokka|HCCEJNIB_1); gnlProkkaHCCEJNIB_3 (original name was: gnl|Prokka|HCCEJNIB_3); gnlProkkaHCCEJNIB_4 (original name was: gnl|Prokka|HCCEJNIB_4); gnlProkkaHCCEJNIB_5 (original name was: gnl|Prokka|HCCEJNIB_5); gnlProkkaHCCEJNIB_6 (original name was: gnl|Prokka|HCCEJNIB_6); gnlProkkaHCCEJNIB_7 (original name was: gnl|Prokka|HCCEJNIB_7); gnlProkkaHCCEJNIB_8 (original name was: gnl|Prokka|HCCEJNIB_8); gnlProkkaHCCEJNIB_9 (original name was: gnl|Prokka|HCCEJNIB_9); gnlProkkaHCCEJNIB_11 (original name was: gnl|Prokka|HCCEJNIB_11); gnlProkkaHCCEJNIB_12 (original name was: gnl|Prokka|HCCEJNIB_12); gnlProkkaHCCEJNIB_13 (original name was: gnl|Prokka|HCCEJNIB_13); gnlProkkaHCCEJNIB_14 (original name was: gnl|Prokka|HCCEJNIB_14); gnlProkkaHCCEJNIB_15 (original name was: gnl|Prokka|HCCEJNIB_15); gnlProkkaHCCEJNIB_16 (original name was: gnl|Prokka|HCCEJNIB_16); gnlProkkaHCCEJNIB_18 (original name was: gnl|Prokka|HCCEJNIB_18); gnlProkkaHCCEJNIB_19 (original name was: gnl|Prokka|HCCEJNIB_19); gnlProkkaHCCEJNIB_20 (original name was: gnl|Prokka|HCCEJNIB_20); gnlProkkaHCCEJNIB_21 (original name was: gnl|Prokka|HCCEJNIB_21); gnlProkkaHCCEJNIB_22 (original name was: gnl|Prokka|HCCEJNIB_22); gnlProkkaHCCEJNIB_23 (original name was: gnl|Prokka|HCCEJNIB_23); gnlProkkaHCCEJNIB_24 (original name was: gnl|Prokka|HCCEJNIB_24); gnlProkkaHCCEJNIB_25 (original name was: gnl|Prokka|HCCEJNIB_25); gnlProkkaHCCEJNIB_26 (original name was: gnl|Prokka|HCCEJNIB_26); gnlProkkaHCCEJNIB_27 (original name was: gnl|Prokka|HCCEJNIB_27); gnlProkkaHCCEJNIB_28 (original name was: gnl|Prokka|HCCEJNIB_28); gnlProkkaHCCEJNIB_29 (original name was: gnl|Prokka|HCCEJNIB_29); gnlProkkaHCCEJNIB_30 (original name was: gnl|Prokka|HCCEJNIB_30); gnlProkkaHCCEJNIB_31 (original name was: gnl|Prokka|HCCEJNIB_31); gnlProkkaHCCEJNIB_32 (original name was: gnl|Prokka|HCCEJNIB_32); gnlProkkaHCCEJNIB_33 (original name was: gnl|Prokka|HCCEJNIB_33); gnlProkkaHCCEJNIB_34 (original name was: gnl|Prokka|HCCEJNIB_34); gnlProkkaHCCEJNIB_35 (original name was: gnl|Prokka|HCCEJNIB_35); gnlProkkaHCCEJNIB_36 (original name was: gnl|Prokka|HCCEJNIB_36); gnlProkkaHCCEJNIB_37 (original name was: gnl|Prokka|HCCEJNIB_37); gnlProkkaHCCEJNIB_38 (original name was: gnl|Prokka|HCCEJNIB_38); gnlProkkaHCCEJNIB_39 (original name was: gnl|Prokka|HCCEJNIB_39); gnlProkkaHCCEJNIB_40 (original name was: gnl|Prokka|HCCEJNIB_40); gnlProkkaHCCEJNIB_41 (original name was: gnl|Prokka|HCCEJNIB_41); gnlProkkaHCCEJNIB_42 (original name was: gnl|Prokka|HCCEJNIB_42); gnlProkkaHCCEJNIB_43 (original name was: gnl|Prokka|HCCEJNIB_43); gnlProkkaHCCEJNIB_44 (original name was: gnl|Prokka|HCCEJNIB_44); gnlProkkaHCCEJNIB_45 (original name was: gnl|Prokka|HCCEJNIB_45); gnlProkkaHCCEJNIB_46 (original name was: gnl|Prokka|HCCEJNIB_46); gnlProkkaHCCEJNIB_47 (original name was: gnl|Prokka|HCCEJNIB_47); gnlProkkaHCCEJNIB_48 (original name was: gnl|Prokka|HCCEJNIB_48); gnlProkkaHCCEJNIB_49 (original name was: gnl|Prokka|HCCEJNIB_49); gnlProkkaHCCEJNIB_50 (original name was: gnl|Prokka|HCCEJNIB_50); gnlProkkaHCCEJNIB_51 (original name was: gnl|Prokka|HCCEJNIB_51); gnlProkkaHCCEJNIB_52 (original name was: gnl|Prokka|HCCEJNIB_52); gnlProkkaHCCEJNIB_53 (original name was: gnl|Prokka|HCCEJNIB_53); gnlProkkaHCCEJNIB_54 (original name was: gnl|Prokka|HCCEJNIB_54)

Compact view

gnlProkkaHCCEJNIB_2 - Region 1 - RiPP-like

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Location: 668 - 10,853 nt. (total: 10,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHCCEJNIB_10 - Region 1 - T3PKS

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Location: 1 - 28,661 nt. (total: 28,661 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHCCEJNIB_17 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 7,334 nt. (total: 7,334 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.