GCA_028322895.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNKFBIOPD_3 (original name was: gnl|Prokka|NKFBIOPD_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	1,290	11,475

gnlProkkaNKFBIOPD_5 (original name was: gnl|Prokka|NKFBIOPD_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	RiPP-like	81,133	87,785

gnlProkkaNKFBIOPD_7 (original name was: gnl|Prokka|NKFBIOPD_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	T3PKS	1	28,874

Region	Type	From	To	Similarity
Region 3.1	RiPP-like	1,290	11,475
Region 5.1	RiPP-like	81,133	87,785
Region 7.1	T3PKS	1	28,874

No secondary metabolite regions were found in these records:: gnlProkkaNKFBIOPD_1 (original name was: gnl|Prokka|NKFBIOPD_1); gnlProkkaNKFBIOPD_2 (original name was: gnl|Prokka|NKFBIOPD_2); gnlProkkaNKFBIOPD_4 (original name was: gnl|Prokka|NKFBIOPD_4); gnlProkkaNKFBIOPD_6 (original name was: gnl|Prokka|NKFBIOPD_6); gnlProkkaNKFBIOPD_8 (original name was: gnl|Prokka|NKFBIOPD_8); gnlProkkaNKFBIOPD_9 (original name was: gnl|Prokka|NKFBIOPD_9); gnlProkkaNKFBIOPD_10 (original name was: gnl|Prokka|NKFBIOPD_10); gnlProkkaNKFBIOPD_11 (original name was: gnl|Prokka|NKFBIOPD_11); gnlProkkaNKFBIOPD_12 (original name was: gnl|Prokka|NKFBIOPD_12); gnlProkkaNKFBIOPD_13 (original name was: gnl|Prokka|NKFBIOPD_13); gnlProkkaNKFBIOPD_14 (original name was: gnl|Prokka|NKFBIOPD_14); gnlProkkaNKFBIOPD_15 (original name was: gnl|Prokka|NKFBIOPD_15); gnlProkkaNKFBIOPD_16 (original name was: gnl|Prokka|NKFBIOPD_16); gnlProkkaNKFBIOPD_17 (original name was: gnl|Prokka|NKFBIOPD_17); gnlProkkaNKFBIOPD_18 (original name was: gnl|Prokka|NKFBIOPD_18); gnlProkkaNKFBIOPD_19 (original name was: gnl|Prokka|NKFBIOPD_19); gnlProkkaNKFBIOPD_20 (original name was: gnl|Prokka|NKFBIOPD_20); gnlProkkaNKFBIOPD_21 (original name was: gnl|Prokka|NKFBIOPD_21); gnlProkkaNKFBIOPD_22 (original name was: gnl|Prokka|NKFBIOPD_22); gnlProkkaNKFBIOPD_23 (original name was: gnl|Prokka|NKFBIOPD_23); gnlProkkaNKFBIOPD_24 (original name was: gnl|Prokka|NKFBIOPD_24); gnlProkkaNKFBIOPD_25 (original name was: gnl|Prokka|NKFBIOPD_25); gnlProkkaNKFBIOPD_26 (original name was: gnl|Prokka|NKFBIOPD_26); gnlProkkaNKFBIOPD_27 (original name was: gnl|Prokka|NKFBIOPD_27); gnlProkkaNKFBIOPD_28 (original name was: gnl|Prokka|NKFBIOPD_28); gnlProkkaNKFBIOPD_29 (original name was: gnl|Prokka|NKFBIOPD_29); gnlProkkaNKFBIOPD_30 (original name was: gnl|Prokka|NKFBIOPD_30); gnlProkkaNKFBIOPD_31 (original name was: gnl|Prokka|NKFBIOPD_31); gnlProkkaNKFBIOPD_32 (original name was: gnl|Prokka|NKFBIOPD_32); gnlProkkaNKFBIOPD_33 (original name was: gnl|Prokka|NKFBIOPD_33)

Compact view

gnlProkkaNKFBIOPD_3 - Region 1 - RiPP-like

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Location: 1,290 - 11,475 nt. (total: 10,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNKFBIOPD_5 - Region 1 - RiPP-like

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Location: 81,133 - 87,785 nt. (total: 6,653 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNKFBIOPD_7 - Region 1 - T3PKS

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Location: 1 - 28,874 nt. (total: 28,874 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.