GCA_028323095.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaAOAMKDMB_3 (original name was: gnl|Prokka|AOAMKDMB_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	67,407	79,557

gnlProkkaAOAMKDMB_11 (original name was: gnl|Prokka|AOAMKDMB_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	131,273	172,442

gnlProkkaAOAMKDMB_42 (original name was: gnl|Prokka|AOAMKDMB_42)

Region	Type	From	To	Most similar known cluster		Similarity
Region 42.1	cyclic-lactone-autoinducer	1	1,242

gnlProkkaAOAMKDMB_49 (original name was: gnl|Prokka|AOAMKDMB_49)

Region	Type	From	To	Most similar known cluster		Similarity
Region 49.1	terpene	26,198	47,079

Region	Type	From	To	Similarity
Region 3.1	RiPP-like	67,407	79,557
Region 11.1	T3PKS	131,273	172,442
Region 42.1	cyclic-lactone-autoinducer	1	1,242
Region 49.1	terpene	26,198	47,079

No secondary metabolite regions were found in these records:: gnlProkkaAOAMKDMB_1 (original name was: gnl|Prokka|AOAMKDMB_1); gnlProkkaAOAMKDMB_2 (original name was: gnl|Prokka|AOAMKDMB_2); gnlProkkaAOAMKDMB_4 (original name was: gnl|Prokka|AOAMKDMB_4); gnlProkkaAOAMKDMB_5 (original name was: gnl|Prokka|AOAMKDMB_5); gnlProkkaAOAMKDMB_6 (original name was: gnl|Prokka|AOAMKDMB_6); gnlProkkaAOAMKDMB_7 (original name was: gnl|Prokka|AOAMKDMB_7); gnlProkkaAOAMKDMB_8 (original name was: gnl|Prokka|AOAMKDMB_8); gnlProkkaAOAMKDMB_9 (original name was: gnl|Prokka|AOAMKDMB_9); gnlProkkaAOAMKDMB_10 (original name was: gnl|Prokka|AOAMKDMB_10); gnlProkkaAOAMKDMB_12 (original name was: gnl|Prokka|AOAMKDMB_12); gnlProkkaAOAMKDMB_13 (original name was: gnl|Prokka|AOAMKDMB_13); gnlProkkaAOAMKDMB_14 (original name was: gnl|Prokka|AOAMKDMB_14); gnlProkkaAOAMKDMB_15 (original name was: gnl|Prokka|AOAMKDMB_15); gnlProkkaAOAMKDMB_16 (original name was: gnl|Prokka|AOAMKDMB_16); gnlProkkaAOAMKDMB_17 (original name was: gnl|Prokka|AOAMKDMB_17); gnlProkkaAOAMKDMB_18 (original name was: gnl|Prokka|AOAMKDMB_18); gnlProkkaAOAMKDMB_19 (original name was: gnl|Prokka|AOAMKDMB_19); gnlProkkaAOAMKDMB_20 (original name was: gnl|Prokka|AOAMKDMB_20); gnlProkkaAOAMKDMB_21 (original name was: gnl|Prokka|AOAMKDMB_21); gnlProkkaAOAMKDMB_22 (original name was: gnl|Prokka|AOAMKDMB_22); gnlProkkaAOAMKDMB_23 (original name was: gnl|Prokka|AOAMKDMB_23); gnlProkkaAOAMKDMB_24 (original name was: gnl|Prokka|AOAMKDMB_24); gnlProkkaAOAMKDMB_25 (original name was: gnl|Prokka|AOAMKDMB_25); gnlProkkaAOAMKDMB_26 (original name was: gnl|Prokka|AOAMKDMB_26); gnlProkkaAOAMKDMB_27 (original name was: gnl|Prokka|AOAMKDMB_27); gnlProkkaAOAMKDMB_28 (original name was: gnl|Prokka|AOAMKDMB_28); gnlProkkaAOAMKDMB_29 (original name was: gnl|Prokka|AOAMKDMB_29); gnlProkkaAOAMKDMB_30 (original name was: gnl|Prokka|AOAMKDMB_30); gnlProkkaAOAMKDMB_31 (original name was: gnl|Prokka|AOAMKDMB_31); gnlProkkaAOAMKDMB_32 (original name was: gnl|Prokka|AOAMKDMB_32); gnlProkkaAOAMKDMB_33 (original name was: gnl|Prokka|AOAMKDMB_33); gnlProkkaAOAMKDMB_34 (original name was: gnl|Prokka|AOAMKDMB_34); gnlProkkaAOAMKDMB_35 (original name was: gnl|Prokka|AOAMKDMB_35); gnlProkkaAOAMKDMB_36 (original name was: gnl|Prokka|AOAMKDMB_36); gnlProkkaAOAMKDMB_37 (original name was: gnl|Prokka|AOAMKDMB_37); gnlProkkaAOAMKDMB_38 (original name was: gnl|Prokka|AOAMKDMB_38); gnlProkkaAOAMKDMB_39 (original name was: gnl|Prokka|AOAMKDMB_39); gnlProkkaAOAMKDMB_40 (original name was: gnl|Prokka|AOAMKDMB_40); gnlProkkaAOAMKDMB_41 (original name was: gnl|Prokka|AOAMKDMB_41); gnlProkkaAOAMKDMB_43 (original name was: gnl|Prokka|AOAMKDMB_43); gnlProkkaAOAMKDMB_44 (original name was: gnl|Prokka|AOAMKDMB_44); gnlProkkaAOAMKDMB_45 (original name was: gnl|Prokka|AOAMKDMB_45); gnlProkkaAOAMKDMB_46 (original name was: gnl|Prokka|AOAMKDMB_46); gnlProkkaAOAMKDMB_47 (original name was: gnl|Prokka|AOAMKDMB_47); gnlProkkaAOAMKDMB_48 (original name was: gnl|Prokka|AOAMKDMB_48); gnlProkkaAOAMKDMB_50 (original name was: gnl|Prokka|AOAMKDMB_50)

Compact view

gnlProkkaAOAMKDMB_3 - Region 1 - RiPP-like

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Location: 67,407 - 79,557 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAOAMKDMB_11 - Region 1 - T3PKS

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Location: 131,273 - 172,442 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAOAMKDMB_42 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 1,242 nt. (total: 1,242 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAOAMKDMB_49 - Region 1 - terpene

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Location: 26,198 - 47,079 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.