GCA_028323345.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaDBBDPPCL_2 (original name was: gnl|Prokka|DBBDPPCL_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	1,290	11,475

gnlProkkaDBBDPPCL_5 (original name was: gnl|Prokka|DBBDPPCL_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	RiPP-like	81,133	87,785

gnlProkkaDBBDPPCL_22 (original name was: gnl|Prokka|DBBDPPCL_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	T3PKS	272,761	313,933

Region	Type	From	To	Similarity
Region 2.1	RiPP-like	1,290	11,475
Region 5.1	RiPP-like	81,133	87,785
Region 22.1	T3PKS	272,761	313,933

No secondary metabolite regions were found in these records:: gnlProkkaDBBDPPCL_1 (original name was: gnl|Prokka|DBBDPPCL_1); gnlProkkaDBBDPPCL_3 (original name was: gnl|Prokka|DBBDPPCL_3); gnlProkkaDBBDPPCL_4 (original name was: gnl|Prokka|DBBDPPCL_4); gnlProkkaDBBDPPCL_6 (original name was: gnl|Prokka|DBBDPPCL_6); gnlProkkaDBBDPPCL_7 (original name was: gnl|Prokka|DBBDPPCL_7); gnlProkkaDBBDPPCL_8 (original name was: gnl|Prokka|DBBDPPCL_8); gnlProkkaDBBDPPCL_9 (original name was: gnl|Prokka|DBBDPPCL_9); gnlProkkaDBBDPPCL_10 (original name was: gnl|Prokka|DBBDPPCL_10); gnlProkkaDBBDPPCL_11 (original name was: gnl|Prokka|DBBDPPCL_11); gnlProkkaDBBDPPCL_12 (original name was: gnl|Prokka|DBBDPPCL_12); gnlProkkaDBBDPPCL_13 (original name was: gnl|Prokka|DBBDPPCL_13); gnlProkkaDBBDPPCL_14 (original name was: gnl|Prokka|DBBDPPCL_14); gnlProkkaDBBDPPCL_15 (original name was: gnl|Prokka|DBBDPPCL_15); gnlProkkaDBBDPPCL_16 (original name was: gnl|Prokka|DBBDPPCL_16); gnlProkkaDBBDPPCL_17 (original name was: gnl|Prokka|DBBDPPCL_17); gnlProkkaDBBDPPCL_18 (original name was: gnl|Prokka|DBBDPPCL_18); gnlProkkaDBBDPPCL_19 (original name was: gnl|Prokka|DBBDPPCL_19); gnlProkkaDBBDPPCL_20 (original name was: gnl|Prokka|DBBDPPCL_20); gnlProkkaDBBDPPCL_21 (original name was: gnl|Prokka|DBBDPPCL_21); gnlProkkaDBBDPPCL_23 (original name was: gnl|Prokka|DBBDPPCL_23); gnlProkkaDBBDPPCL_24 (original name was: gnl|Prokka|DBBDPPCL_24); gnlProkkaDBBDPPCL_25 (original name was: gnl|Prokka|DBBDPPCL_25); gnlProkkaDBBDPPCL_26 (original name was: gnl|Prokka|DBBDPPCL_26); gnlProkkaDBBDPPCL_27 (original name was: gnl|Prokka|DBBDPPCL_27); gnlProkkaDBBDPPCL_28 (original name was: gnl|Prokka|DBBDPPCL_28); gnlProkkaDBBDPPCL_29 (original name was: gnl|Prokka|DBBDPPCL_29); gnlProkkaDBBDPPCL_30 (original name was: gnl|Prokka|DBBDPPCL_30); gnlProkkaDBBDPPCL_31 (original name was: gnl|Prokka|DBBDPPCL_31); gnlProkkaDBBDPPCL_32 (original name was: gnl|Prokka|DBBDPPCL_32)

Compact view

gnlProkkaDBBDPPCL_2 - Region 1 - RiPP-like

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Location: 1,290 - 11,475 nt. (total: 10,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDBBDPPCL_5 - Region 1 - RiPP-like

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Location: 81,133 - 87,785 nt. (total: 6,653 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDBBDPPCL_22 - Region 1 - T3PKS

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Location: 272,761 - 313,933 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.