GCA_028325485.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaKPMDMHFH_11 (original name was: gnl|Prokka|KPMDMHFH_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	202,644	243,810

gnlProkkaKPMDMHFH_19 (original name was: gnl|Prokka|KPMDMHFH_19)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	RiPP-like	265,396	284,245

gnlProkkaKPMDMHFH_21 (original name was: gnl|Prokka|KPMDMHFH_21)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	RiPP-like	73,981	86,077	quinolidomicin A	Polyketide	3%

Region	Type	From	To	Most similar known cluster	Similarity
Region 11.1	T3PKS	202,644	243,810
Region 19.1	RiPP-like	265,396	284,245
Region 21.1	RiPP-like	73,981	86,077	quinolidomicin A	Polyketide	3%

No secondary metabolite regions were found in these records:: gnlProkkaKPMDMHFH_1 (original name was: gnl|Prokka|KPMDMHFH_1); gnlProkkaKPMDMHFH_2 (original name was: gnl|Prokka|KPMDMHFH_2); gnlProkkaKPMDMHFH_3 (original name was: gnl|Prokka|KPMDMHFH_3); gnlProkkaKPMDMHFH_4 (original name was: gnl|Prokka|KPMDMHFH_4); gnlProkkaKPMDMHFH_5 (original name was: gnl|Prokka|KPMDMHFH_5); gnlProkkaKPMDMHFH_6 (original name was: gnl|Prokka|KPMDMHFH_6); gnlProkkaKPMDMHFH_7 (original name was: gnl|Prokka|KPMDMHFH_7); gnlProkkaKPMDMHFH_8 (original name was: gnl|Prokka|KPMDMHFH_8); gnlProkkaKPMDMHFH_9 (original name was: gnl|Prokka|KPMDMHFH_9); gnlProkkaKPMDMHFH_10 (original name was: gnl|Prokka|KPMDMHFH_10); gnlProkkaKPMDMHFH_12 (original name was: gnl|Prokka|KPMDMHFH_12); gnlProkkaKPMDMHFH_13 (original name was: gnl|Prokka|KPMDMHFH_13); gnlProkkaKPMDMHFH_14 (original name was: gnl|Prokka|KPMDMHFH_14); gnlProkkaKPMDMHFH_15 (original name was: gnl|Prokka|KPMDMHFH_15); gnlProkkaKPMDMHFH_16 (original name was: gnl|Prokka|KPMDMHFH_16); gnlProkkaKPMDMHFH_17 (original name was: gnl|Prokka|KPMDMHFH_17); gnlProkkaKPMDMHFH_18 (original name was: gnl|Prokka|KPMDMHFH_18); gnlProkkaKPMDMHFH_20 (original name was: gnl|Prokka|KPMDMHFH_20); gnlProkkaKPMDMHFH_22 (original name was: gnl|Prokka|KPMDMHFH_22); gnlProkkaKPMDMHFH_23 (original name was: gnl|Prokka|KPMDMHFH_23); gnlProkkaKPMDMHFH_24 (original name was: gnl|Prokka|KPMDMHFH_24); gnlProkkaKPMDMHFH_25 (original name was: gnl|Prokka|KPMDMHFH_25); gnlProkkaKPMDMHFH_26 (original name was: gnl|Prokka|KPMDMHFH_26)

Compact view

gnlProkkaKPMDMHFH_11 - Region 1 - T3PKS

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Location: 202,644 - 243,810 nt. (total: 41,167 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

NRPS/PKS domains

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKPMDMHFH_19 - Region 1 - RiPP-like

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Location: 265,396 - 284,245 nt. (total: 18,850 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKPMDMHFH_21 - Region 1 - RiPP-like

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Location: 73,981 - 86,077 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1